0.008811 0.000000 0.006633 0.000000 0.021753 0.000000 0.000000 0.000000 0.015790 0.00000 0.00000 0.00000 Greasley, S.E. Johnson, E. Kraus, M.L. Cronin, C.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 126.97 90.00 113.490 45.970 79.270 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C24 H23 F4 N5 O4 521.464 2-{[(3R,4S)-3-fluoro-1-{[4-(trifluoromethoxy)phenyl]acetyl}piperidin-4-yl]oxy}-5-(1-methyl-1H-imidazol-4-yl)pyridine-3-carboxamide non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H Y 88 N C N 89 N C Y 90 N C Y 91 N C Y 92 N C N 93 R C N 94 N C N 95 N C Y 96 N C Y 97 N C Y 98 N C Y 99 N C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N N Y 105 N C N 106 N O N 107 S C N 108 N C N 109 N N N 110 N C N 111 N C N 112 N O Y 113 N C Y 114 N C Y 115 N C N 116 N O N 117 N C N 118 N F N 119 N F N 120 N F N 121 N F N 122 N C N 123 N N N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N N N 149 S C N 150 N C N 151 N O N 152 N C N 153 N C N 154 N C N 155 N O N 156 N N N 157 N O N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 N C N 173 N C N 174 N C N 175 N O N 176 N O N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N N N 188 N C N 189 N C N 190 N O N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C Y 202 N C Y 203 N N Y 204 N C Y 205 N C Y 206 N N N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N O N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 S C N 226 N C N 227 N C N 228 N C N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C N 248 N C N 249 N C N 250 N C N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 N C N 270 N C N 271 N C N 272 N C N 273 N N N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N S N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C N 338 N C N 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C N 355 N O N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N N N 365 S C N 366 N C N 367 N O N 368 R C N 369 N O N 370 N C N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N N Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing Y 92 N doub Y 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N doub N 99 N doub N 100 N sing Y 101 N doub Y 102 N sing N 103 N doub Y 104 N doub Y 105 N sing Y 106 N doub Y 107 N sing N 108 N sing N 109 N sing Y 110 N doub Y 111 N sing N 112 N sing N 113 N sing Y 114 N sing Y 115 N doub Y 116 N doub N 117 N sing N 118 N sing N 119 N sing Y 120 N sing Y 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing Y 203 N sing Y 204 N doub Y 205 N doub N 206 N sing Y 207 N sing N 208 N sing Y 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N doub N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N doub N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing Y 311 N doub Y 312 N sing Y 313 N sing N 314 N sing Y 315 N doub N 316 N sing Y 317 N doub N 318 N sing Y 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N doub N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing Y 380 N doub Y 381 N sing Y 382 N sing N 383 N sing Y 384 N doub Y 385 N sing Y 386 N sing N 387 N sing Y 388 N sing Y 389 N doub N 390 N sing Y 391 N doub N 392 N sing Y 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing Y 408 N doub Y 409 N sing Y 410 N sing N 411 N sing Y 412 N doub N 413 N sing Y 414 N doub N 415 N sing Y 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N doub N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing US J. Med. Chem. JMCMAR 0151 1520-4804 61 6779 6800 10.1021/acs.jmedchem.8b00633 29944371 Discovery of Potent, Selective, and Peripherally Restricted Pan-Trk Kinase Inhibitors for the Treatment of Pain. 2018 0000-0003-0955-271X 10.2210/pdb6dkb/pdb pdb_00006dkb 93 1 CCD 2014-05-17 RAYONIX MX-300 SINGLE WAVELENGTH M x-ray 1 1.0 1.0 08ID-1 CLSI 1.0 SYNCHROTRON CLSI BEAMLINE 08ID-1 36110.504 High affinity nerve growth factor receptor 2.7.10.1 1 man polymer 521.464 2-{[(3R,4S)-3-fluoro-1-{[4-(trifluoromethoxy)phenyl]acetyl}piperidin-4-yl]oxy}-5-(1-methyl-1H-imidazol-4-yl)pyridine-3-carboxamide 1 syn non-polymer 18.015 water 1 nat water Neurotrophic tyrosine kinase receptor type 1,TRK1-transforming tyrosine kinase protein,Tropomyosin-related kinase A,Tyrosine kinase receptor,Tyrosine kinase receptor A,Trk-A,gp140trk,p140-TrkA no no GSTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA GMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV LWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG GSTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA GMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV LWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 320 NTRK1, MTC, TRK, TRKA 9606 Homo sapiens 7108 Spodoptera frugiperda pKRIC-N6 Biological sequence 1 2.29 46.23 VAPOR DIFFUSION, SITTING DROP 8.0 Well volume: 30.0 uL Drop volume from well: 0.2 uL Drop protein volume: 0.4 uL Well Ingredients: Polymer: 10.0 %w/v (6.0 uL of stock 50.0 %w/v) PEG 3350 Buffer: 16.0 %v/v (4.8 uL of stock 100.0 %v/v) tacsimate (pH 8.00) Organic (non-volatile): 10.0 %v/v (3.0 uL of stock 100.0 %v/v) Ethylene glycol Additive: 0.025 M (1.5 uL of stock 0.5 M) TCEP hydrochloride Plate setup temperature: 13 C Plate incubation temperature: 21 C 294 citation citation_author chem_comp_atom chem_comp_bond database_2 repository Initial release Data collection Database references Data collection Database references 1 0 2018-07-11 1 1 2018-08-15 1 2 2024-03-13 _citation.journal_volume _citation.page_first _citation.page_last _citation.title _citation_author.identifier_ORCID _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession N RCSB Y RCSB 2018-05-29 REL REL FKY 2-{[(3R,4S)-3-fluoro-1-{[4-(trifluoromethoxy)phenyl]acetyl}piperidin-4-yl]oxy}-5-(1-methyl-1H-imidazol-4-yl)pyridine-3-carboxamide HOH water LIG 4000 2 FKY FKY 4000 A HOH 1 3 HOH HOH 4101 A n 1 477 A n 2 478 A n 3 479 A n 4 480 A n 5 481 A n 6 482 A n 7 483 A n 8 484 A n 9 485 A n 10 486 A n 11 487 A n 12 488 A n 13 489 A n 14 490 A n 15 491 A n 16 492 A n 17 493 A n 18 494 A n 19 495 A n 20 496 A n 21 497 A n 22 498 A n 23 499 A n 24 500 A CYS 501 n 25 CYS 501 A VAL 502 n 26 VAL 502 A HIS 503 n 27 HIS 503 A HIS 504 n 28 HIS 504 A ILE 505 n 29 ILE 505 A LYS 506 n 30 LYS 506 A ARG 507 n 31 ARG 507 A ARG 508 n 32 ARG 508 A ASP 509 n 33 ASP 509 A ILE 510 n 34 ILE 510 A VAL 511 n 35 VAL 511 A LEU 512 n 36 LEU 512 A LYS 513 n 37 LYS 513 A TRP 514 n 38 TRP 514 A GLU 515 n 39 GLU 515 A LEU 516 n 40 LEU 516 A GLY 517 n 41 GLY 517 A GLU 518 n 42 GLU 518 A GLY 519 n 43 GLY 519 A ALA 520 n 44 ALA 520 A PHE 521 n 45 PHE 521 A GLY 522 n 46 GLY 522 A LYS 523 n 47 LYS 523 A VAL 524 n 48 VAL 524 A PHE 525 n 49 PHE 525 A LEU 526 n 50 LEU 526 A ALA 527 n 51 ALA 527 A GLU 528 n 52 GLU 528 A CYS 529 n 53 CYS 529 A HIS 530 n 54 HIS 530 A ASN 531 n 55 ASN 531 A LEU 532 n 56 LEU 532 A LEU 533 n 57 LEU 533 A PRO 534 n 58 PRO 534 A GLU 535 n 59 GLU 535 A GLN 536 n 60 GLN 536 A ASP 537 n 61 ASP 537 A LYS 538 n 62 LYS 538 A MET 539 n 63 MET 539 A LEU 540 n 64 LEU 540 A VAL 541 n 65 VAL 541 A ALA 542 n 66 ALA 542 A VAL 543 n 67 VAL 543 A LYS 544 n 68 LYS 544 A ALA 545 n 69 ALA 545 A LEU 546 n 70 LEU 546 A LYS 547 n 71 LYS 547 A GLU 548 n 72 GLU 548 A ALA 549 n 73 ALA 549 A SER 550 n 74 SER 550 A GLU 551 n 75 GLU 551 A SER 552 n 76 SER 552 A ALA 553 n 77 ALA 553 A ARG 554 n 78 ARG 554 A GLN 555 n 79 GLN 555 A ASP 556 n 80 ASP 556 A PHE 557 n 81 PHE 557 A GLN 558 n 82 GLN 558 A ARG 559 n 83 ARG 559 A GLU 560 n 84 GLU 560 A ALA 561 n 85 ALA 561 A GLU 562 n 86 GLU 562 A LEU 563 n 87 LEU 563 A LEU 564 n 88 LEU 564 A THR 565 n 89 THR 565 A MET 566 n 90 MET 566 A LEU 567 n 91 LEU 567 A GLN 568 n 92 GLN 568 A HIS 569 n 93 HIS 569 A GLN 570 n 94 GLN 570 A HIS 571 n 95 HIS 571 A ILE 572 n 96 ILE 572 A VAL 573 n 97 VAL 573 A ARG 574 n 98 ARG 574 A PHE 575 n 99 PHE 575 A PHE 576 n 100 PHE 576 A GLY 577 n 101 GLY 577 A VAL 578 n 102 VAL 578 A CYS 579 n 103 CYS 579 A THR 580 n 104 THR 580 A GLU 581 n 105 GLU 581 A GLY 582 n 106 GLY 582 A ARG 583 n 107 ARG 583 A PRO 584 n 108 PRO 584 A LEU 585 n 109 LEU 585 A LEU 586 n 110 LEU 586 A MET 587 n 111 MET 587 A VAL 588 n 112 VAL 588 A PHE 589 n 113 PHE 589 A GLU 590 n 114 GLU 590 A TYR 591 n 115 TYR 591 A MET 592 n 116 MET 592 A ARG 593 n 117 ARG 593 A HIS 594 n 118 HIS 594 A GLY 595 n 119 GLY 595 A ASP 596 n 120 ASP 596 A LEU 597 n 121 LEU 597 A ASN 598 n 122 ASN 598 A ARG 599 n 123 ARG 599 A PHE 600 n 124 PHE 600 A LEU 601 n 125 LEU 601 A ARG 602 n 126 ARG 602 A SER 603 n 127 SER 603 A HIS 604 n 128 HIS 604 A GLY 605 n 129 GLY 605 A PRO 606 n 130 PRO 606 A n 131 607 A n 132 608 A n 133 609 A n 134 610 A n 135 611 A n 136 612 A n 137 613 A n 138 614 A n 139 615 A n 140 616 A n 141 617 A n 142 618 A n 143 619 A GLY 620 n 144 GLY 620 A PRO 621 n 145 PRO 621 A LEU 622 n 146 LEU 622 A GLY 623 n 147 GLY 623 A LEU 624 n 148 LEU 624 A GLY 625 n 149 GLY 625 A GLN 626 n 150 GLN 626 A LEU 627 n 151 LEU 627 A LEU 628 n 152 LEU 628 A ALA 629 n 153 ALA 629 A VAL 630 n 154 VAL 630 A ALA 631 n 155 ALA 631 A SER 632 n 156 SER 632 A GLN 633 n 157 GLN 633 A VAL 634 n 158 VAL 634 A ALA 635 n 159 ALA 635 A ALA 636 n 160 ALA 636 A GLY 637 n 161 GLY 637 A MET 638 n 162 MET 638 A VAL 639 n 163 VAL 639 A TYR 640 n 164 TYR 640 A LEU 641 n 165 LEU 641 A ALA 642 n 166 ALA 642 A GLY 643 n 167 GLY 643 A LEU 644 n 168 LEU 644 A HIS 645 n 169 HIS 645 A PHE 646 n 170 PHE 646 A VAL 647 n 171 VAL 647 A HIS 648 n 172 HIS 648 A ARG 649 n 173 ARG 649 A ASP 650 n 174 ASP 650 A LEU 651 n 175 LEU 651 A ALA 652 n 176 ALA 652 A THR 653 n 177 THR 653 A ARG 654 n 178 ARG 654 A ASN 655 n 179 ASN 655 A CYS 656 n 180 CYS 656 A LEU 657 n 181 LEU 657 A VAL 658 n 182 VAL 658 A GLY 659 n 183 GLY 659 A GLN 660 n 184 GLN 660 A GLY 661 n 185 GLY 661 A LEU 662 n 186 LEU 662 A VAL 663 n 187 VAL 663 A VAL 664 n 188 VAL 664 A LYS 665 n 189 LYS 665 A ILE 666 n 190 ILE 666 A GLY 667 n 191 GLY 667 A ASP 668 n 192 ASP 668 A PHE 669 n 193 PHE 669 A GLY 670 n 194 GLY 670 A n 195 671 A n 196 672 A n 197 673 A n 198 674 A n 199 675 A n 200 676 A SER 677 n 201 SER 677 A THR 678 n 202 THR 678 A ASP 679 n 203 ASP 679 A TYR 680 n 204 TYR 680 A TYR 681 n 205 TYR 681 A ARG 682 n 206 ARG 682 A n 207 683 A n 208 684 A n 209 685 A n 210 686 A n 211 687 A MET 688 n 212 MET 688 A LEU 689 n 213 LEU 689 A PRO 690 n 214 PRO 690 A ILE 691 n 215 ILE 691 A ARG 692 n 216 ARG 692 A TRP 693 n 217 TRP 693 A MET 694 n 218 MET 694 A PRO 695 n 219 PRO 695 A PRO 696 n 220 PRO 696 A GLU 697 n 221 GLU 697 A SER 698 n 222 SER 698 A ILE 699 n 223 ILE 699 A LEU 700 n 224 LEU 700 A TYR 701 n 225 TYR 701 A ARG 702 n 226 ARG 702 A LYS 703 n 227 LYS 703 A PHE 704 n 228 PHE 704 A THR 705 n 229 THR 705 A THR 706 n 230 THR 706 A GLU 707 n 231 GLU 707 A SER 708 n 232 SER 708 A ASP 709 n 233 ASP 709 A VAL 710 n 234 VAL 710 A TRP 711 n 235 TRP 711 A SER 712 n 236 SER 712 A PHE 713 n 237 PHE 713 A GLY 714 n 238 GLY 714 A VAL 715 n 239 VAL 715 A VAL 716 n 240 VAL 716 A LEU 717 n 241 LEU 717 A TRP 718 n 242 TRP 718 A GLU 719 n 243 GLU 719 A ILE 720 n 244 ILE 720 A PHE 721 n 245 PHE 721 A THR 722 n 246 THR 722 A TYR 723 n 247 TYR 723 A GLY 724 n 248 GLY 724 A LYS 725 n 249 LYS 725 A GLN 726 n 250 GLN 726 A PRO 727 n 251 PRO 727 A TRP 728 n 252 TRP 728 A TYR 729 n 253 TYR 729 A GLN 730 n 254 GLN 730 A LEU 731 n 255 LEU 731 A SER 732 n 256 SER 732 A ASN 733 n 257 ASN 733 A THR 734 n 258 THR 734 A GLU 735 n 259 GLU 735 A ALA 736 n 260 ALA 736 A ILE 737 n 261 ILE 737 A ASP 738 n 262 ASP 738 A CYS 739 n 263 CYS 739 A ILE 740 n 264 ILE 740 A THR 741 n 265 THR 741 A GLN 742 n 266 GLN 742 A GLY 743 n 267 GLY 743 A ARG 744 n 268 ARG 744 A GLU 745 n 269 GLU 745 A LEU 746 n 270 LEU 746 A GLU 747 n 271 GLU 747 A ARG 748 n 272 ARG 748 A PRO 749 n 273 PRO 749 A ARG 750 n 274 ARG 750 A ALA 751 n 275 ALA 751 A CYS 752 n 276 CYS 752 A PRO 753 n 277 PRO 753 A PRO 754 n 278 PRO 754 A GLU 755 n 279 GLU 755 A VAL 756 n 280 VAL 756 A TYR 757 n 281 TYR 757 A ALA 758 n 282 ALA 758 A ILE 759 n 283 ILE 759 A MET 760 n 284 MET 760 A ARG 761 n 285 ARG 761 A GLY 762 n 286 GLY 762 A CYS 763 n 287 CYS 763 A TRP 764 n 288 TRP 764 A GLN 765 n 289 GLN 765 A ARG 766 n 290 ARG 766 A GLU 767 n 291 GLU 767 A PRO 768 n 292 PRO 768 A GLN 769 n 293 GLN 769 A GLN 770 n 294 GLN 770 A ARG 771 n 295 ARG 771 A HIS 772 n 296 HIS 772 A SER 773 n 297 SER 773 A ILE 774 n 298 ILE 774 A LYS 775 n 299 LYS 775 A ASP 776 n 300 ASP 776 A VAL 777 n 301 VAL 777 A HIS 778 n 302 HIS 778 A ALA 779 n 303 ALA 779 A ARG 780 n 304 ARG 780 A LEU 781 n 305 LEU 781 A GLN 782 n 306 GLN 782 A ALA 783 n 307 ALA 783 A LEU 784 n 308 LEU 784 A ALA 785 n 309 ALA 785 A GLN 786 n 310 GLN 786 A ALA 787 n 311 ALA 787 A PRO 788 n 312 PRO 788 A PRO 789 n 313 PRO 789 A VAL 790 n 314 VAL 790 A TYR 791 n 315 TYR 791 A LEU 792 n 316 LEU 792 A ASP 793 n 317 ASP 793 A VAL 794 n 318 VAL 794 A LEU 795 n 319 LEU 795 A GLY 796 n 320 GLY 796 A author_and_software_defined_assembly PISA 1 monomeric gel filtration 0 0 14290 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TRP 514 A N TRP 38 A O LEU 526 A O LEU 50 A N PHE 525 A N PHE 49 A O VAL 543 A O VAL 67 A N LYS 544 A N LYS 68 A O MET 587 A O MET 111 A O VAL 588 A O VAL 112 A N PHE 576 A N PHE 100 A N GLY 595 A N GLY 119 A O VAL 658 A O VAL 182 A N GLY 659 A N GLY 183 A O VAL 663 A O VAL 187 1 A CG ARG 682 A CG ARG 206 1 Y 1 A CD ARG 682 A CD ARG 206 1 Y 1 A NE ARG 682 A NE ARG 206 1 Y 1 A CZ ARG 682 A CZ ARG 206 1 Y 1 A NH1 ARG 682 A NH1 ARG 206 1 Y 1 A NH2 ARG 682 A NH2 ARG 206 1 Y 1 A GLY 477 A GLY 1 1 Y 1 A SER 478 A SER 2 1 Y 1 A THR 479 A THR 3 1 Y 1 A GLU 480 A GLU 4 1 Y 1 A GLY 481 A GLY 5 1 Y 1 A LYS 482 A LYS 6 1 Y 1 A GLY 483 A GLY 7 1 Y 1 A SER 484 A SER 8 1 Y 1 A GLY 485 A GLY 9 1 Y 1 A LEU 486 A LEU 10 1 Y 1 A GLN 487 A GLN 11 1 Y 1 A GLY 488 A GLY 12 1 Y 1 A HIS 489 A HIS 13 1 Y 1 A ILE 490 A ILE 14 1 Y 1 A ILE 491 A ILE 15 1 Y 1 A GLU 492 A GLU 16 1 Y 1 A ASN 493 A ASN 17 1 Y 1 A PRO 494 A PRO 18 1 Y 1 A GLN 495 A GLN 19 1 Y 1 A TYR 496 A TYR 20 1 Y 1 A PHE 497 A PHE 21 1 Y 1 A SER 498 A SER 22 1 Y 1 A ASP 499 A ASP 23 1 Y 1 A ALA 500 A ALA 24 1 Y 1 A ASP 607 A ASP 131 1 Y 1 A ALA 608 A ALA 132 1 Y 1 A LYS 609 A LYS 133 1 Y 1 A LEU 610 A LEU 134 1 Y 1 A LEU 611 A LEU 135 1 Y 1 A ALA 612 A ALA 136 1 Y 1 A GLY 613 A GLY 137 1 Y 1 A GLY 614 A GLY 138 1 Y 1 A GLU 615 A GLU 139 1 Y 1 A ASP 616 A ASP 140 1 Y 1 A VAL 617 A VAL 141 1 Y 1 A ALA 618 A ALA 142 1 Y 1 A PRO 619 A PRO 143 1 Y 1 A MET 671 A MET 195 1 Y 1 A SER 672 A SER 196 1 Y 1 A ARG 673 A ARG 197 1 Y 1 A ASP 674 A ASP 198 1 Y 1 A ILE 675 A ILE 199 1 Y 1 A TYR 676 A TYR 200 1 Y 1 A VAL 683 A VAL 207 1 Y 1 A GLY 684 A GLY 208 1 Y 1 A GLY 685 A GLY 209 1 Y 1 A ARG 686 A ARG 210 1 Y 1 A THR 687 A THR 211 1 Y 1 A THR 580 -104.66 46.34 1 A ARG 649 75.89 -18.83 1 A ASP 668 -173.63 117.20 1 A PHE 669 -89.02 -138.07 1 A TRP 764 -108.20 52.61 80.37 4.3893 0.0000 7.9792 7.4142 0.0000 -11.8035 0.9317 0.9225 0.2450 0.2159 0.2173 2.68 41.00 441 9289 4.75 98.95 1.361 RANDOM 1 THROUGHOUT 0.0 1.037 0.311 0.321 2.68 41.00 1 2222 37 0 2184 0.009 2278 HARMONIC 2.00 1.03 3085 HARMONIC 2.00 789 SINUSOIDAL 2.00 49 HARMONIC 2.00 355 HARMONIC 5.00 2278 HARMONIC 20.00 2.80 18.36 273 SEMIHARMONIC 5.00 2476 SEMIHARMONIC 4.00 0.3052 0.2434 0.2464 3.00 118 2414 2532 5 4.66 98.95 83.99 2.68 50 6DKB 9290 0.081 1 15.61 3.7 99.9 2.68 2.78 1.64 3222 0.80 1 3.6 99.6 refinement BUSTER 2.11.4 data reduction HKL-2000 data scaling SCALEPACK phasing BUSTER N Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 10b. 1 N N 2 N N 3 N N A LYS 506 A LYS 30 HELX_P A ARG 508 A ARG 32 5 AA1 3 A SER 550 A SER 74 HELX_P A LEU 567 A LEU 91 1 AA2 18 A LEU 597 A LEU 121 HELX_P A HIS 604 A HIS 128 1 AA3 8 A GLY 623 A GLY 147 HELX_P A LEU 644 A LEU 168 1 AA4 22 A ALA 652 A ALA 176 HELX_P A ARG 654 A ARG 178 5 AA5 3 A PRO 690 A PRO 214 HELX_P A MET 694 A MET 218 5 AA6 5 A PRO 695 A PRO 219 HELX_P A ARG 702 A ARG 226 1 AA7 8 A THR 705 A THR 229 HELX_P A THR 722 A THR 246 1 AA8 18 A SER 732 A SER 256 HELX_P A GLN 742 A GLN 266 1 AA9 11 A PRO 753 A PRO 277 HELX_P A TRP 764 A TRP 288 1 AB1 12 A GLU 767 A GLU 291 HELX_P A ARG 771 A ARG 295 5 AB2 5 A SER 773 A SER 297 HELX_P A ALA 787 A ALA 311 1 AB3 15 TRANSFERASE/TRANSFERASE INHIBITOR Inhibitor Tyrosine kinase, TRANSFERASE, pan-Trk Kinase, Treatment for pain, TRANSFERASE-TRANSFERASE INHIBITOR complex A ARG 583 A ARG 107 1 A PRO 584 A PRO 108 -1.20 NTRK1_HUMAN UNP 1 381 P04629 P04629-4 TEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM VYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW EIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG 381 698 6DKB 479 796 P04629 A 1 3 320 1 expression tag GLY 477 6DKB A P04629 UNP 1 1 expression tag SER 478 6DKB A P04629 UNP 2 5 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 510 A ILE 34 A GLU 518 A GLU 42 A GLY 522 A GLY 46 A HIS 530 A HIS 54 A LYS 538 A LYS 62 A LEU 546 A LEU 70 A LEU 585 A LEU 109 A GLU 590 A GLU 114 A PHE 575 A PHE 99 A CYS 579 A CYS 103 A GLY 595 A GLY 119 A ASP 596 A ASP 120 A CYS 656 A CYS 180 A GLY 659 A GLY 183 A VAL 663 A VAL 187 A ILE 666 A ILE 190 binding site for residue FKY A 4000 A FKY 4000 Software 16 A LEU 516 A LEU 40 16 1_555 A ALA 542 A ALA 66 16 1_555 A LEU 564 A LEU 88 16 1_555 A VAL 573 A VAL 97 16 1_555 A PHE 589 A PHE 113 16 1_555 A GLU 590 A GLU 114 16 1_555 A TYR 591 A TYR 115 16 1_555 A MET 592 A MET 116 16 1_555 A GLY 595 A GLY 119 16 1_555 A LEU 641 A LEU 165 16 1_555 A HIS 648 A HIS 172 16 1_555 A LEU 657 A LEU 181 16 1_555 A ILE 666 A ILE 190 16 1_555 A GLY 667 A GLY 191 16 1_555 A ASP 668 A ASP 192 16 1_555 A PHE 669 A PHE 193 16 1_555 5 C 1 2 1