0.027643
0.000000
0.000000
0.000000
0.014288
0.000000
0.000000
0.000000
0.006932
0.00000
0.00000
0.00000
0000-0002-3185-2682
Sasnauskas, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
36.175
69.988
144.265
C10 H14 N3 O8 P
335.207
n
5-FORMYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
2'-DEOXY-5-FORMYLCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
N
N
N
6
N
C
N
7
N
C
N
8
N
O
N
9
N
N
N
10
N
C
N
11
N
N
N
12
N
C
N
13
N
C
N
14
N
C
N
15
R
C
N
16
N
O
N
17
R
C
N
18
S
C
N
19
N
O
N
20
N
C
N
21
N
O
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
N
N
38
S
C
N
39
N
C
N
40
N
O
N
41
N
C
N
42
N
O
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
N
N
51
S
C
N
52
N
C
N
53
N
O
N
54
N
C
N
55
N
C
N
56
N
C
N
57
N
N
N
58
N
C
N
59
N
N
N
60
N
N
N
61
N
O
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
N
N
78
S
C
N
79
N
C
N
80
N
O
N
81
N
C
N
82
N
C
N
83
N
O
N
84
N
N
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
O
N
101
N
O
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
R
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
S
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
Y
136
N
N
Y
137
N
C
Y
138
N
N
Y
139
N
C
Y
140
N
C
N
141
N
N
Y
142
N
N
Y
143
N
C
Y
144
N
N
Y
145
N
C
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
O
N
161
N
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
C
N
166
R
C
N
167
N
O
N
168
S
C
N
169
N
O
N
170
N
C
N
171
R
C
N
172
N
N
N
173
N
C
N
174
N
O
N
175
N
N
N
176
N
C
N
177
N
N
N
178
N
C
N
179
N
C
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
O
N
195
N
P
N
196
N
O
N
197
N
O
N
198
N
O
N
199
N
C
N
200
R
C
N
201
N
O
N
202
S
C
N
203
N
O
N
204
N
C
N
205
R
C
Y
206
N
N
Y
207
N
C
Y
208
N
N
Y
209
N
C
N
210
N
C
N
211
N
O
N
212
N
N
N
213
N
C
N
214
N
N
N
215
N
N
Y
216
N
C
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
O
N
232
N
P
N
233
N
O
N
234
N
O
N
235
N
O
N
236
N
C
N
237
R
C
N
238
N
O
N
239
S
C
N
240
N
O
N
241
N
C
N
242
R
C
N
243
N
N
N
244
N
C
N
245
N
O
N
246
N
N
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
O
N
275
N
N
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
N
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
Y
321
N
C
Y
322
N
N
Y
323
N
C
Y
324
N
C
Y
325
N
N
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
S
C
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
C
N
390
N
C
N
391
N
C
N
392
N
N
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
N
414
N
C
N
415
N
S
N
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
N
N
453
S
C
N
454
N
C
N
455
N
O
N
456
N
C
N
457
N
C
N
458
N
C
N
459
N
O
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
N
N
470
S
C
N
471
N
C
N
472
N
O
N
473
N
C
N
474
N
O
N
475
N
O
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
N
N
484
S
C
N
485
N
C
N
486
N
O
N
487
R
C
N
488
N
O
N
489
N
C
N
490
N
O
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
N
N
501
S
C
N
502
N
C
N
503
N
O
N
504
N
C
Y
505
N
C
Y
506
N
C
Y
507
N
C
Y
508
N
N
Y
509
N
C
Y
510
N
C
Y
511
N
C
Y
512
N
C
Y
513
N
C
N
514
N
O
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
N
N
528
S
C
N
529
N
C
N
530
N
O
N
531
N
C
Y
532
N
C
Y
533
N
C
Y
534
N
C
Y
535
N
C
Y
536
N
C
Y
537
N
C
N
538
N
O
N
539
N
O
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
N
N
552
S
C
N
553
N
C
N
554
N
O
N
555
N
C
N
556
N
C
N
557
N
C
N
558
N
O
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
1
N
sing
N
2
N
doub
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
doub
N
11
N
sing
N
12
N
doub
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
Y
143
N
sing
Y
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
Y
148
N
sing
Y
149
N
doub
N
150
N
sing
Y
151
N
doub
N
152
N
sing
N
153
N
sing
Y
154
N
sing
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
Y
216
N
sing
Y
217
N
sing
Y
218
N
doub
N
219
N
sing
Y
220
N
sing
N
221
N
sing
Y
222
N
doub
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
sing
Y
327
N
doub
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
Y
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
doub
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
Y
434
N
doub
Y
435
N
sing
Y
436
N
sing
N
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
doub
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
doub
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
doub
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
Y
503
N
doub
Y
504
N
sing
Y
505
N
sing
N
506
N
sing
Y
507
N
doub
Y
508
N
sing
Y
509
N
sing
N
510
N
sing
Y
511
N
sing
Y
512
N
doub
N
513
N
sing
Y
514
N
doub
N
515
N
sing
Y
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
doub
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
Y
531
N
doub
Y
532
N
sing
Y
533
N
sing
N
534
N
sing
Y
535
N
doub
N
536
N
sing
Y
537
N
doub
N
538
N
sing
Y
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
doub
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
NE
FEBS Lett.
FEBLAL
0165
1873-3468
592
3335
3345
10.1002/1873-3468.13244
30194838
Recognition of modified cytosine variants by the DNA-binding domain of methyl-directed endonuclease McrBC.
2018
0000-0002-3185-2682
10.2210/pdb6gce/pdb
pdb_00006gce
100
1
CCD
2014-04-13
MARMOSAIC 225 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.001
1.0
I911-3
MAX II
1.001
SYNCHROTRON
MAX II BEAMLINE I911-3
19659.920
5-methylcytosine-specific restriction enzyme B
3.1.21.-
2
man
polymer
3642.364
DNA (5'-D(*GP*CP*TP*AP*(5FC)P*CP*GP*GP*TP*CP*TP*C)-3')
1
syn
polymer
3712.430
DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3')
1
syn
polymer
18.015
water
370
nat
water
EcoKMcrBC
no
no
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAY
GISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIP
PLEGHHHHHH
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAY
GISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIP
PLEGHHHHHH
A,B
polypeptide(L)
no
yes
(DG)(DC)(DT)(DA)(5FC)(DC)(DG)(DG)(DT)(DC)(DT)(DC)
GCTACCGGTCTC
D
polydeoxyribonucleotide
no
no
(DG)(DA)(DG)(DA)(DC)(DC)(DG)(DG)(DT)(DA)(DG)(DC)
GAGACCGGTAGC
C
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
K12
sample
1
170
mcrB, rglB, b4346, JW5871
83333
Escherichia coli
316385
Escherichia coli str. K-12 substr. DH10B
Biological sequence
1
1.96
37.13
VAPOR DIFFUSION, SITTING DROP
7.5
0.2 M LiCl, 22% PEG4000
293
-1.177
1
19
D
2
C
13
-2.762
D_DG2:DC13_C
1
-18.686
-0.090
-0.044
-0.591
9.034
1
19
D
3
C
12
2.075
D_DC3:DG12_C
2
-7.347
-0.706
-0.486
-0.214
19.568
1
20
D
4
C
11
0.908
D_DT4:DA11_C
3
-6.948
0.135
-0.353
-0.286
16.590
1
20
D
5
C
10
1.343
D_DA5:DT10_C
4
-13.510
0.041
0.108
0.039
-13.688
1
19
D
7
C
8
1.016
D_DC7:DG8_C
5
-3.585
0.149
0.163
-0.144
17.307
1
19
D
8
C
7
0.472
D_DG8:DC7_C
6
-1.199
-0.217
0.393
-0.094
-16.229
1
20
D
10
C
5
-0.141
D_DT10:DA5_C
7
-14.915
-0.122
0.014
-0.073
-16.463
1
19
D
11
C
4
3.950
D_DC11:DG4_C
8
-7.823
0.142
0.281
-0.263
-3.273
1
20
D
12
C
3
2.272
D_DT12:DA3_C
9
-4.182
-0.155
-0.071
-0.195
-8.162
1
19
D
13
C
2
3.246
D_DC13:DG2_C
10
-6.728
0.596
0.111
-0.556
3.041
38.497
D
D
2
3
13.700
C
C
13
12
3.014
8.930
0.303
0.403
DD_DG2DC3:DG12DC13_CC
1
5.190
-7.963
37.136
-0.433
0.148
2.960
34.855
D
D
3
4
19.887
C
C
12
11
3.144
11.692
0.786
0.064
DD_DC3DT4:DA11DG12_CC
2
-1.379
2.346
32.865
-1.602
-1.515
3.501
32.018
D
D
4
5
3.293
C
C
11
10
3.437
1.807
-0.798
-0.279
DD_DT4DA5:DT10DA11_CC
3
-5.445
9.922
31.513
-0.854
0.396
2.662
32.489
D
D
7
8
32.785
C
C
8
7
2.754
17.410
-0.090
0.608
DD_DC7DG8:DC7DG8_CC
4
-2.172
4.089
27.452
-1.665
-0.182
3.311
34.586
D
D
10
11
-3.646
C
C
5
4
3.264
-2.166
1.030
-0.358
DD_DT10DC11:DG4DA5_CC
5
1.139
-1.917
34.502
-0.266
-1.555
2.628
30.404
D
D
11
12
20.562
C
C
4
3
3.039
10.543
-0.772
-0.345
DD_DC11DT12:DA3DG4_CC
6
3.647
-7.112
28.329
-2.557
2.128
3.272
39.324
D
D
12
13
13.510
C
C
3
2
3.440
9.015
0.348
-0.318
DD_DT12DC13:DG2DA3_CC
7
-1.263
1.892
38.297
-1.587
-0.674
citation
citation_author
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Database references
Refinement description
1
0
2018-09-19
1
1
2018-10-24
1
2
2024-01-17
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.title
_citation_author.identifier_ORCID
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Lithuania
Research Council of Lithuania, MIP-027/2012
5hmC DNA
N
PDBE
Y
PDBE
2018-04-17
REL
REL
5FC
5FC
SUBJECT OF INVESTIGATION
HOH
water
32630
synthetic construct
sample
1
12
32630
synthetic construct
sample
1
12
3SSC
PDB
experimental model
HOH
285
4
HOH
HOH
201
A
HOH
131
4
HOH
HOH
202
A
HOH
214
4
HOH
HOH
203
A
HOH
100
4
HOH
HOH
204
A
HOH
325
4
HOH
HOH
205
A
HOH
136
4
HOH
HOH
206
A
HOH
204
4
HOH
HOH
207
A
HOH
103
4
HOH
HOH
208
A
HOH
225
4
HOH
HOH
209
A
HOH
211
4
HOH
HOH
210
A
HOH
160
4
HOH
HOH
211
A
HOH
231
4
HOH
HOH
212
A
HOH
135
4
HOH
HOH
213
A
HOH
190
4
HOH
HOH
214
A
HOH
13
4
HOH
HOH
215
A
HOH
154
4
HOH
HOH
216
A
HOH
145
4
HOH
HOH
217
A
HOH
68
4
HOH
HOH
218
A
HOH
275
4
HOH
HOH
219
A
HOH
331
4
HOH
HOH
220
A
HOH
153
4
HOH
HOH
221
A
HOH
134
4
HOH
HOH
222
A
HOH
142
4
HOH
HOH
223
A
HOH
166
4
HOH
HOH
224
A
HOH
21
4
HOH
HOH
225
A
HOH
34
4
HOH
HOH
226
A
HOH
165
4
HOH
HOH
227
A
HOH
189
4
HOH
HOH
228
A
HOH
116
4
HOH
HOH
229
A
HOH
237
4
HOH
HOH
230
A
HOH
122
4
HOH
HOH
231
A
HOH
85
4
HOH
HOH
232
A
HOH
71
4
HOH
HOH
233
A
HOH
292
4
HOH
HOH
234
A
HOH
173
4
HOH
HOH
235
A
HOH
117
4
HOH
HOH
236
A
HOH
35
4
HOH
HOH
237
A
HOH
260
4
HOH
HOH
238
A
HOH
293
4
HOH
HOH
239
A
HOH
151
4
HOH
HOH
240
A
HOH
141
4
HOH
HOH
241
A
HOH
240
4
HOH
HOH
242
A
HOH
65
4
HOH
HOH
243
A
HOH
207
4
HOH
HOH
244
A
HOH
72
4
HOH
HOH
245
A
HOH
345
4
HOH
HOH
246
A
HOH
152
4
HOH
HOH
247
A
HOH
4
4
HOH
HOH
248
A
HOH
140
4
HOH
HOH
249
A
HOH
97
4
HOH
HOH
250
A
HOH
268
4
HOH
HOH
251
A
HOH
66
4
HOH
HOH
252
A
HOH
139
4
HOH
HOH
253
A
HOH
101
4
HOH
HOH
254
A
HOH
69
4
HOH
HOH
255
A
HOH
167
4
HOH
HOH
256
A
HOH
82
4
HOH
HOH
257
A
HOH
162
4
HOH
HOH
258
A
HOH
5
4
HOH
HOH
259
A
HOH
70
4
HOH
HOH
260
A
HOH
54
4
HOH
HOH
261
A
HOH
37
4
HOH
HOH
262
A
HOH
349
4
HOH
HOH
263
A
HOH
414
4
HOH
HOH
264
A
HOH
58
4
HOH
HOH
265
A
HOH
24
4
HOH
HOH
266
A
HOH
12
4
HOH
HOH
267
A
HOH
265
4
HOH
HOH
268
A
HOH
95
4
HOH
HOH
269
A
HOH
175
4
HOH
HOH
270
A
HOH
354
4
HOH
HOH
271
A
HOH
14
4
HOH
HOH
272
A
HOH
26
4
HOH
HOH
273
A
HOH
188
4
HOH
HOH
274
A
HOH
39
4
HOH
HOH
275
A
HOH
49
4
HOH
HOH
276
A
HOH
244
4
HOH
HOH
277
A
HOH
357
4
HOH
HOH
278
A
HOH
309
4
HOH
HOH
279
A
HOH
38
4
HOH
HOH
280
A
HOH
44
4
HOH
HOH
281
A
HOH
10
4
HOH
HOH
282
A
HOH
36
4
HOH
HOH
283
A
HOH
115
4
HOH
HOH
284
A
HOH
124
4
HOH
HOH
285
A
HOH
74
4
HOH
HOH
286
A
HOH
170
4
HOH
HOH
287
A
HOH
75
4
HOH
HOH
288
A
HOH
48
4
HOH
HOH
289
A
HOH
93
4
HOH
HOH
290
A
HOH
277
4
HOH
HOH
291
A
HOH
213
4
HOH
HOH
292
A
HOH
83
4
HOH
HOH
293
A
HOH
364
4
HOH
HOH
294
A
HOH
7
4
HOH
HOH
295
A
HOH
353
4
HOH
HOH
296
A
HOH
249
4
HOH
HOH
297
A
HOH
23
4
HOH
HOH
298
A
HOH
129
4
HOH
HOH
299
A
HOH
391
4
HOH
HOH
300
A
HOH
399
4
HOH
HOH
301
A
HOH
329
4
HOH
HOH
302
A
HOH
11
4
HOH
HOH
303
A
HOH
218
4
HOH
HOH
304
A
HOH
281
4
HOH
HOH
305
A
HOH
257
4
HOH
HOH
306
A
HOH
278
4
HOH
HOH
307
A
HOH
3
4
HOH
HOH
308
A
HOH
76
4
HOH
HOH
309
A
HOH
8
4
HOH
HOH
310
A
HOH
339
4
HOH
HOH
311
A
HOH
79
4
HOH
HOH
312
A
HOH
352
4
HOH
HOH
313
A
HOH
180
4
HOH
HOH
314
A
HOH
194
4
HOH
HOH
315
A
HOH
296
4
HOH
HOH
316
A
HOH
355
4
HOH
HOH
317
A
HOH
9
4
HOH
HOH
318
A
HOH
274
4
HOH
HOH
319
A
HOH
286
4
HOH
HOH
320
A
HOH
305
4
HOH
HOH
321
A
HOH
179
4
HOH
HOH
322
A
HOH
138
4
HOH
HOH
323
A
HOH
314
4
HOH
HOH
324
A
HOH
227
4
HOH
HOH
325
A
HOH
110
4
HOH
HOH
326
A
HOH
163
4
HOH
HOH
327
A
HOH
383
4
HOH
HOH
328
A
HOH
303
4
HOH
HOH
329
A
HOH
361
4
HOH
HOH
330
A
HOH
288
4
HOH
HOH
331
A
HOH
148
4
HOH
HOH
332
A
HOH
419
4
HOH
HOH
333
A
HOH
280
4
HOH
HOH
334
A
HOH
177
4
HOH
HOH
335
A
HOH
406
4
HOH
HOH
336
A
HOH
143
4
HOH
HOH
337
A
HOH
407
4
HOH
HOH
338
A
HOH
338
4
HOH
HOH
339
A
HOH
332
4
HOH
HOH
340
A
HOH
336
4
HOH
HOH
341
A
HOH
291
4
HOH
HOH
342
A
HOH
356
4
HOH
HOH
343
A
HOH
133
4
HOH
HOH
344
A
HOH
322
4
HOH
HOH
345
A
HOH
125
4
HOH
HOH
346
A
HOH
341
4
HOH
HOH
347
A
HOH
183
4
HOH
HOH
348
A
HOH
272
4
HOH
HOH
349
A
HOH
208
4
HOH
HOH
350
A
HOH
287
4
HOH
HOH
351
A
HOH
55
4
HOH
HOH
352
A
HOH
381
4
HOH
HOH
201
B
HOH
216
4
HOH
HOH
202
B
HOH
20
4
HOH
HOH
203
B
HOH
242
4
HOH
HOH
204
B
HOH
62
4
HOH
HOH
205
B
HOH
373
4
HOH
HOH
206
B
HOH
219
4
HOH
HOH
207
B
HOH
297
4
HOH
HOH
208
B
HOH
92
4
HOH
HOH
209
B
HOH
25
4
HOH
HOH
210
B
HOH
84
4
HOH
HOH
211
B
HOH
126
4
HOH
HOH
212
B
HOH
226
4
HOH
HOH
213
B
HOH
198
4
HOH
HOH
214
B
HOH
224
4
HOH
HOH
215
B
HOH
77
4
HOH
HOH
216
B
HOH
327
4
HOH
HOH
217
B
HOH
284
4
HOH
HOH
218
B
HOH
233
4
HOH
HOH
219
B
HOH
150
4
HOH
HOH
220
B
HOH
248
4
HOH
HOH
221
B
HOH
40
4
HOH
HOH
222
B
HOH
182
4
HOH
HOH
223
B
HOH
80
4
HOH
HOH
224
B
HOH
128
4
HOH
HOH
225
B
HOH
123
4
HOH
HOH
226
B
HOH
50
4
HOH
HOH
227
B
HOH
337
4
HOH
HOH
228
B
HOH
159
4
HOH
HOH
229
B
HOH
137
4
HOH
HOH
230
B
HOH
57
4
HOH
HOH
231
B
HOH
197
4
HOH
HOH
232
B
HOH
178
4
HOH
HOH
233
B
HOH
112
4
HOH
HOH
234
B
HOH
195
4
HOH
HOH
235
B
HOH
255
4
HOH
HOH
236
B
HOH
60
4
HOH
HOH
237
B
HOH
164
4
HOH
HOH
238
B
HOH
52
4
HOH
HOH
239
B
HOH
236
4
HOH
HOH
240
B
HOH
91
4
HOH
HOH
241
B
HOH
184
4
HOH
HOH
242
B
HOH
94
4
HOH
HOH
243
B
HOH
262
4
HOH
HOH
244
B
HOH
308
4
HOH
HOH
245
B
HOH
96
4
HOH
HOH
246
B
HOH
239
4
HOH
HOH
247
B
HOH
118
4
HOH
HOH
248
B
HOH
261
4
HOH
HOH
249
B
HOH
59
4
HOH
HOH
250
B
HOH
16
4
HOH
HOH
251
B
HOH
27
4
HOH
HOH
252
B
HOH
63
4
HOH
HOH
253
B
HOH
192
4
HOH
HOH
254
B
HOH
2
4
HOH
HOH
255
B
HOH
269
4
HOH
HOH
256
B
HOH
111
4
HOH
HOH
257
B
HOH
87
4
HOH
HOH
258
B
HOH
81
4
HOH
HOH
259
B
HOH
33
4
HOH
HOH
260
B
HOH
102
4
HOH
HOH
261
B
HOH
330
4
HOH
HOH
262
B
HOH
78
4
HOH
HOH
263
B
HOH
121
4
HOH
HOH
264
B
HOH
88
4
HOH
HOH
265
B
HOH
17
4
HOH
HOH
266
B
HOH
104
4
HOH
HOH
267
B
HOH
161
4
HOH
HOH
268
B
HOH
279
4
HOH
HOH
269
B
HOH
413
4
HOH
HOH
270
B
HOH
42
4
HOH
HOH
271
B
HOH
108
4
HOH
HOH
272
B
HOH
238
4
HOH
HOH
273
B
HOH
176
4
HOH
HOH
274
B
HOH
191
4
HOH
HOH
275
B
HOH
171
4
HOH
HOH
276
B
HOH
99
4
HOH
HOH
277
B
HOH
120
4
HOH
HOH
278
B
HOH
264
4
HOH
HOH
279
B
HOH
130
4
HOH
HOH
280
B
HOH
172
4
HOH
HOH
281
B
HOH
282
4
HOH
HOH
282
B
HOH
169
4
HOH
HOH
283
B
HOH
86
4
HOH
HOH
284
B
HOH
220
4
HOH
HOH
285
B
HOH
174
4
HOH
HOH
286
B
HOH
307
4
HOH
HOH
287
B
HOH
273
4
HOH
HOH
288
B
HOH
18
4
HOH
HOH
289
B
HOH
365
4
HOH
HOH
290
B
HOH
299
4
HOH
HOH
291
B
HOH
230
4
HOH
HOH
292
B
HOH
215
4
HOH
HOH
293
B
HOH
267
4
HOH
HOH
294
B
HOH
359
4
HOH
HOH
295
B
HOH
212
4
HOH
HOH
296
B
HOH
340
4
HOH
HOH
297
B
HOH
56
4
HOH
HOH
298
B
HOH
304
4
HOH
HOH
299
B
HOH
47
4
HOH
HOH
300
B
HOH
185
4
HOH
HOH
301
B
HOH
29
4
HOH
HOH
302
B
HOH
30
4
HOH
HOH
303
B
HOH
46
4
HOH
HOH
304
B
HOH
386
4
HOH
HOH
305
B
HOH
203
4
HOH
HOH
306
B
HOH
202
4
HOH
HOH
307
B
HOH
229
4
HOH
HOH
308
B
HOH
186
4
HOH
HOH
309
B
HOH
201
4
HOH
HOH
310
B
HOH
114
4
HOH
HOH
311
B
HOH
6
4
HOH
HOH
312
B
HOH
416
4
HOH
HOH
313
B
HOH
276
4
HOH
HOH
314
B
HOH
323
4
HOH
HOH
315
B
HOH
417
4
HOH
HOH
316
B
HOH
221
4
HOH
HOH
317
B
HOH
366
4
HOH
HOH
318
B
HOH
415
4
HOH
HOH
319
B
HOH
132
4
HOH
HOH
320
B
HOH
187
4
HOH
HOH
321
B
HOH
344
4
HOH
HOH
322
B
HOH
200
4
HOH
HOH
323
B
HOH
300
4
HOH
HOH
324
B
HOH
342
4
HOH
HOH
325
B
HOH
310
4
HOH
HOH
326
B
HOH
418
4
HOH
HOH
327
B
HOH
321
4
HOH
HOH
328
B
HOH
385
4
HOH
HOH
329
B
HOH
223
4
HOH
HOH
330
B
HOH
245
4
HOH
HOH
331
B
HOH
350
4
HOH
HOH
332
B
HOH
312
4
HOH
HOH
333
B
HOH
119
4
HOH
HOH
334
B
HOH
363
4
HOH
HOH
335
B
HOH
362
4
HOH
HOH
336
B
HOH
266
4
HOH
HOH
337
B
HOH
315
4
HOH
HOH
338
B
HOH
73
4
HOH
HOH
339
B
HOH
253
4
HOH
HOH
340
B
HOH
392
4
HOH
HOH
341
B
HOH
358
4
HOH
HOH
342
B
HOH
294
4
HOH
HOH
343
B
HOH
234
4
HOH
HOH
344
B
HOH
90
4
HOH
HOH
345
B
HOH
64
4
HOH
HOH
346
B
HOH
348
4
HOH
HOH
347
B
HOH
343
4
HOH
HOH
348
B
HOH
243
4
HOH
HOH
349
B
HOH
181
4
HOH
HOH
350
B
HOH
144
4
HOH
HOH
351
B
HOH
316
4
HOH
HOH
352
B
HOH
241
4
HOH
HOH
353
B
HOH
256
4
HOH
HOH
354
B
HOH
146
4
HOH
HOH
355
B
HOH
311
4
HOH
HOH
356
B
HOH
326
4
HOH
HOH
357
B
HOH
196
4
HOH
HOH
358
B
HOH
222
4
HOH
HOH
359
B
HOH
113
4
HOH
HOH
101
D
HOH
205
4
HOH
HOH
102
D
HOH
43
4
HOH
HOH
103
D
HOH
31
4
HOH
HOH
104
D
HOH
22
4
HOH
HOH
105
D
HOH
105
4
HOH
HOH
106
D
HOH
32
4
HOH
HOH
107
D
HOH
370
4
HOH
HOH
108
D
HOH
247
4
HOH
HOH
109
D
HOH
252
4
HOH
HOH
110
D
HOH
19
4
HOH
HOH
111
D
HOH
155
4
HOH
HOH
112
D
HOH
374
4
HOH
HOH
113
D
HOH
259
4
HOH
HOH
114
D
HOH
377
4
HOH
HOH
115
D
HOH
15
4
HOH
HOH
116
D
HOH
306
4
HOH
HOH
117
D
HOH
28
4
HOH
HOH
118
D
HOH
210
4
HOH
HOH
119
D
HOH
254
4
HOH
HOH
120
D
HOH
235
4
HOH
HOH
121
D
HOH
270
4
HOH
HOH
122
D
HOH
250
4
HOH
HOH
123
D
HOH
404
4
HOH
HOH
124
D
HOH
232
4
HOH
HOH
125
D
HOH
368
4
HOH
HOH
126
D
HOH
394
4
HOH
HOH
127
D
HOH
290
4
HOH
HOH
128
D
HOH
393
4
HOH
HOH
129
D
HOH
289
4
HOH
HOH
101
C
HOH
375
4
HOH
HOH
102
C
HOH
283
4
HOH
HOH
103
C
HOH
107
4
HOH
HOH
104
C
HOH
193
4
HOH
HOH
105
C
HOH
109
4
HOH
HOH
106
C
HOH
53
4
HOH
HOH
107
C
HOH
156
4
HOH
HOH
108
C
HOH
158
4
HOH
HOH
109
C
HOH
206
4
HOH
HOH
110
C
HOH
51
4
HOH
HOH
111
C
HOH
319
4
HOH
HOH
112
C
HOH
106
4
HOH
HOH
113
C
HOH
157
4
HOH
HOH
114
C
HOH
271
4
HOH
HOH
115
C
HOH
168
4
HOH
HOH
116
C
HOH
149
4
HOH
HOH
117
C
HOH
403
4
HOH
HOH
118
C
HOH
45
4
HOH
HOH
119
C
HOH
302
4
HOH
HOH
120
C
HOH
41
4
HOH
HOH
121
C
HOH
67
4
HOH
HOH
122
C
HOH
228
4
HOH
HOH
123
C
HOH
378
4
HOH
HOH
124
C
HOH
263
4
HOH
HOH
125
C
HOH
400
4
HOH
HOH
126
C
HOH
351
4
HOH
HOH
127
C
HOH
61
4
HOH
HOH
128
C
HOH
410
4
HOH
HOH
129
C
HOH
147
4
HOH
HOH
130
C
MET
1
n
1
MET
1
A
GLU
2
n
2
GLU
2
A
SER
3
n
3
SER
3
A
ILE
4
n
4
ILE
4
A
GLN
5
n
5
GLN
5
A
PRO
6
n
6
PRO
6
A
TRP
7
n
7
TRP
7
A
ILE
8
n
8
ILE
8
A
GLU
9
n
9
GLU
9
A
LYS
10
n
10
LYS
10
A
PHE
11
n
11
PHE
11
A
ILE
12
n
12
ILE
12
A
LYS
13
n
13
LYS
13
A
GLN
14
n
14
GLN
14
A
ALA
15
n
15
ALA
15
A
GLN
16
n
16
GLN
16
A
GLN
17
n
17
GLN
17
A
GLN
18
n
18
GLN
18
A
ARG
19
n
19
ARG
19
A
SER
20
n
20
SER
20
A
GLN
21
n
21
GLN
21
A
SER
22
n
22
SER
22
A
THR
23
n
23
THR
23
A
LYS
24
n
24
LYS
24
A
ASP
25
n
25
ASP
25
A
TYR
26
n
26
TYR
26
A
PRO
27
n
27
PRO
27
A
THR
28
n
28
THR
28
A
SER
29
n
29
SER
29
A
TYR
30
n
30
TYR
30
A
ARG
31
n
31
ARG
31
A
ASN
32
n
32
ASN
32
A
LEU
33
n
33
LEU
33
A
ARG
34
n
34
ARG
34
A
VAL
35
n
35
VAL
35
A
LYS
36
n
36
LYS
36
A
LEU
37
n
37
LEU
37
A
SER
38
n
38
SER
38
A
PHE
39
n
39
PHE
39
A
GLY
40
n
40
GLY
40
A
TYR
41
n
41
TYR
41
A
GLY
42
n
42
GLY
42
A
ASN
43
n
43
ASN
43
A
PHE
44
n
44
PHE
44
A
THR
45
n
45
THR
45
A
SER
46
n
46
SER
46
A
ILE
47
n
47
ILE
47
A
PRO
48
n
48
PRO
48
A
TRP
49
n
49
TRP
49
A
PHE
50
n
50
PHE
50
A
ALA
51
n
51
ALA
51
A
PHE
52
n
52
PHE
52
A
LEU
53
n
53
LEU
53
A
GLY
54
n
54
GLY
54
A
GLU
55
n
55
GLU
55
A
GLY
56
n
56
GLY
56
A
GLN
57
n
57
GLN
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
SER
60
n
60
SER
60
A
ASN
61
n
61
ASN
61
A
GLY
62
n
62
GLY
62
A
ILE
63
n
63
ILE
63
A
TYR
64
n
64
TYR
64
A
PRO
65
n
65
PRO
65
A
VAL
66
n
66
VAL
66
A
ILE
67
n
67
ILE
67
A
LEU
68
n
68
LEU
68
A
TYR
69
n
69
TYR
69
A
TYR
70
n
70
TYR
70
A
LYS
71
n
71
LYS
71
A
ASP
72
n
72
ASP
72
A
PHE
73
n
73
PHE
73
A
ASP
74
n
74
ASP
74
A
GLU
75
n
75
GLU
75
A
LEU
76
n
76
LEU
76
A
VAL
77
n
77
VAL
77
A
LEU
78
n
78
LEU
78
A
ALA
79
n
79
ALA
79
A
TYR
80
n
80
TYR
80
A
GLY
81
n
81
GLY
81
A
ILE
82
n
82
ILE
82
A
SER
83
n
83
SER
83
A
ASP
84
n
84
ASP
84
A
THR
85
n
85
THR
85
A
ASN
86
n
86
ASN
86
A
GLU
87
n
87
GLU
87
A
PRO
88
n
88
PRO
88
A
HIS
89
n
89
HIS
89
A
ALA
90
n
90
ALA
90
A
GLN
91
n
91
GLN
91
A
TRP
92
n
92
TRP
92
A
GLN
93
n
93
GLN
93
A
PHE
94
n
94
PHE
94
A
SER
95
n
95
SER
95
A
SER
96
n
96
SER
96
A
ASP
97
n
97
ASP
97
A
ILE
98
n
98
ILE
98
A
PRO
99
n
99
PRO
99
A
LYS
100
n
100
LYS
100
A
THR
101
n
101
THR
101
A
ILE
102
n
102
ILE
102
A
ALA
103
n
103
ALA
103
A
GLU
104
n
104
GLU
104
A
TYR
105
n
105
TYR
105
A
PHE
106
n
106
PHE
106
A
GLN
107
n
107
GLN
107
A
ALA
108
n
108
ALA
108
A
THR
109
n
109
THR
109
A
SER
110
n
110
SER
110
A
GLY
111
n
111
GLY
111
A
VAL
112
n
112
VAL
112
A
TYR
113
n
113
TYR
113
A
PRO
114
n
114
PRO
114
A
LYS
115
n
115
LYS
115
A
LYS
116
n
116
LYS
116
A
TYR
117
n
117
TYR
117
A
GLY
118
n
118
GLY
118
A
GLN
119
n
119
GLN
119
A
SER
120
n
120
SER
120
A
TYR
121
n
121
TYR
121
A
TYR
122
n
122
TYR
122
A
ALA
123
n
123
ALA
123
A
CYS
124
n
124
CYS
124
A
SER
125
n
125
SER
125
A
GLN
126
n
126
GLN
126
A
LYS
127
n
127
LYS
127
A
VAL
128
n
128
VAL
128
A
SER
129
n
129
SER
129
A
GLN
130
n
130
GLN
130
A
GLY
131
n
131
GLY
131
A
ILE
132
n
132
ILE
132
A
ASP
133
n
133
ASP
133
A
TYR
134
n
134
TYR
134
A
THR
135
n
135
THR
135
A
ARG
136
n
136
ARG
136
A
PHE
137
n
137
PHE
137
A
ALA
138
n
138
ALA
138
A
SER
139
n
139
SER
139
A
MET
140
n
140
MET
140
A
LEU
141
n
141
LEU
141
A
ASP
142
n
142
ASP
142
A
ASN
143
n
143
ASN
143
A
ILE
144
n
144
ILE
144
A
ILE
145
n
145
ILE
145
A
ASN
146
n
146
ASN
146
A
ASP
147
n
147
ASP
147
A
TYR
148
n
148
TYR
148
A
LYS
149
n
149
LYS
149
A
LEU
150
n
150
LEU
150
A
ILE
151
n
151
ILE
151
A
PHE
152
n
152
PHE
152
A
ASN
153
n
153
ASN
153
A
SER
154
n
154
SER
154
A
GLY
155
n
155
GLY
155
A
LYS
156
n
156
LYS
156
A
SER
157
n
157
SER
157
A
VAL
158
n
158
VAL
158
A
n
159
159
A
n
160
160
A
n
161
161
A
n
162
162
A
n
163
163
A
n
164
164
A
n
165
165
A
n
166
166
A
n
167
167
A
n
168
168
A
n
169
169
A
n
170
170
A
MET
1
n
1
MET
1
B
GLU
2
n
2
GLU
2
B
SER
3
n
3
SER
3
B
ILE
4
n
4
ILE
4
B
GLN
5
n
5
GLN
5
B
PRO
6
n
6
PRO
6
B
TRP
7
n
7
TRP
7
B
ILE
8
n
8
ILE
8
B
GLU
9
n
9
GLU
9
B
LYS
10
n
10
LYS
10
B
PHE
11
n
11
PHE
11
B
ILE
12
n
12
ILE
12
B
LYS
13
n
13
LYS
13
B
GLN
14
n
14
GLN
14
B
ALA
15
n
15
ALA
15
B
GLN
16
n
16
GLN
16
B
GLN
17
n
17
GLN
17
B
GLN
18
n
18
GLN
18
B
ARG
19
n
19
ARG
19
B
SER
20
n
20
SER
20
B
GLN
21
n
21
GLN
21
B
SER
22
n
22
SER
22
B
THR
23
n
23
THR
23
B
LYS
24
n
24
LYS
24
B
ASP
25
n
25
ASP
25
B
TYR
26
n
26
TYR
26
B
PRO
27
n
27
PRO
27
B
THR
28
n
28
THR
28
B
SER
29
n
29
SER
29
B
TYR
30
n
30
TYR
30
B
ARG
31
n
31
ARG
31
B
ASN
32
n
32
ASN
32
B
LEU
33
n
33
LEU
33
B
ARG
34
n
34
ARG
34
B
VAL
35
n
35
VAL
35
B
LYS
36
n
36
LYS
36
B
LEU
37
n
37
LEU
37
B
SER
38
n
38
SER
38
B
PHE
39
n
39
PHE
39
B
GLY
40
n
40
GLY
40
B
TYR
41
n
41
TYR
41
B
GLY
42
n
42
GLY
42
B
ASN
43
n
43
ASN
43
B
PHE
44
n
44
PHE
44
B
THR
45
n
45
THR
45
B
SER
46
n
46
SER
46
B
ILE
47
n
47
ILE
47
B
PRO
48
n
48
PRO
48
B
TRP
49
n
49
TRP
49
B
PHE
50
n
50
PHE
50
B
ALA
51
n
51
ALA
51
B
PHE
52
n
52
PHE
52
B
LEU
53
n
53
LEU
53
B
GLY
54
n
54
GLY
54
B
GLU
55
n
55
GLU
55
B
GLY
56
n
56
GLY
56
B
GLN
57
n
57
GLN
57
B
GLU
58
n
58
GLU
58
B
ALA
59
n
59
ALA
59
B
SER
60
n
60
SER
60
B
ASN
61
n
61
ASN
61
B
GLY
62
n
62
GLY
62
B
ILE
63
n
63
ILE
63
B
TYR
64
n
64
TYR
64
B
PRO
65
n
65
PRO
65
B
VAL
66
n
66
VAL
66
B
ILE
67
n
67
ILE
67
B
LEU
68
n
68
LEU
68
B
TYR
69
n
69
TYR
69
B
TYR
70
n
70
TYR
70
B
LYS
71
n
71
LYS
71
B
ASP
72
n
72
ASP
72
B
PHE
73
n
73
PHE
73
B
ASP
74
n
74
ASP
74
B
GLU
75
n
75
GLU
75
B
LEU
76
n
76
LEU
76
B
VAL
77
n
77
VAL
77
B
LEU
78
n
78
LEU
78
B
ALA
79
n
79
ALA
79
B
TYR
80
n
80
TYR
80
B
GLY
81
n
81
GLY
81
B
ILE
82
n
82
ILE
82
B
SER
83
n
83
SER
83
B
ASP
84
n
84
ASP
84
B
THR
85
n
85
THR
85
B
ASN
86
n
86
ASN
86
B
GLU
87
n
87
GLU
87
B
PRO
88
n
88
PRO
88
B
HIS
89
n
89
HIS
89
B
ALA
90
n
90
ALA
90
B
GLN
91
n
91
GLN
91
B
TRP
92
n
92
TRP
92
B
GLN
93
n
93
GLN
93
B
PHE
94
n
94
PHE
94
B
SER
95
n
95
SER
95
B
SER
96
n
96
SER
96
B
ASP
97
n
97
ASP
97
B
ILE
98
n
98
ILE
98
B
PRO
99
n
99
PRO
99
B
LYS
100
n
100
LYS
100
B
THR
101
n
101
THR
101
B
ILE
102
n
102
ILE
102
B
ALA
103
n
103
ALA
103
B
GLU
104
n
104
GLU
104
B
TYR
105
n
105
TYR
105
B
PHE
106
n
106
PHE
106
B
GLN
107
n
107
GLN
107
B
ALA
108
n
108
ALA
108
B
THR
109
n
109
THR
109
B
SER
110
n
110
SER
110
B
GLY
111
n
111
GLY
111
B
VAL
112
n
112
VAL
112
B
TYR
113
n
113
TYR
113
B
PRO
114
n
114
PRO
114
B
LYS
115
n
115
LYS
115
B
LYS
116
n
116
LYS
116
B
TYR
117
n
117
TYR
117
B
GLY
118
n
118
GLY
118
B
GLN
119
n
119
GLN
119
B
SER
120
n
120
SER
120
B
TYR
121
n
121
TYR
121
B
TYR
122
n
122
TYR
122
B
ALA
123
n
123
ALA
123
B
CYS
124
n
124
CYS
124
B
SER
125
n
125
SER
125
B
GLN
126
n
126
GLN
126
B
LYS
127
n
127
LYS
127
B
VAL
128
n
128
VAL
128
B
SER
129
n
129
SER
129
B
GLN
130
n
130
GLN
130
B
GLY
131
n
131
GLY
131
B
ILE
132
n
132
ILE
132
B
ASP
133
n
133
ASP
133
B
TYR
134
n
134
TYR
134
B
THR
135
n
135
THR
135
B
ARG
136
n
136
ARG
136
B
PHE
137
n
137
PHE
137
B
ALA
138
n
138
ALA
138
B
SER
139
n
139
SER
139
B
MET
140
n
140
MET
140
B
LEU
141
n
141
LEU
141
B
ASP
142
n
142
ASP
142
B
ASN
143
n
143
ASN
143
B
ILE
144
n
144
ILE
144
B
ILE
145
n
145
ILE
145
B
ASN
146
n
146
ASN
146
B
ASP
147
n
147
ASP
147
B
TYR
148
n
148
TYR
148
B
LYS
149
n
149
LYS
149
B
LEU
150
n
150
LEU
150
B
ILE
151
n
151
ILE
151
B
PHE
152
n
152
PHE
152
B
ASN
153
n
153
ASN
153
B
SER
154
n
154
SER
154
B
GLY
155
n
155
GLY
155
B
LYS
156
n
156
LYS
156
B
SER
157
n
157
SER
157
B
VAL
158
n
158
VAL
158
B
n
159
159
B
n
160
160
B
n
161
161
B
n
162
162
B
n
163
163
B
n
164
164
B
n
165
165
B
n
166
166
B
n
167
167
B
n
168
168
B
n
169
169
B
n
170
170
B
DG
2
n
1
DG
2
D
DC
3
n
2
DC
3
D
DT
4
n
3
DT
4
D
DA
5
n
4
DA
5
D
5FC
6
n
5
5FC
6
D
DC
7
n
6
DC
7
D
DG
8
n
7
DG
8
D
DG
9
n
8
DG
9
D
DT
10
n
9
DT
10
D
DC
11
n
10
DC
11
D
DT
12
n
11
DT
12
D
DC
13
n
12
DC
13
D
DG
2
n
1
DG
2
C
DA
3
n
2
DA
3
C
DG
4
n
3
DG
4
C
DA
5
n
4
DA
5
C
DC
6
n
5
DC
6
C
DC
7
n
6
DC
7
C
DG
8
n
7
DG
8
C
DG
9
n
8
DG
9
C
DT
10
n
9
DT
10
C
DA
11
n
10
DA
11
C
DG
12
n
11
DG
12
C
DC
13
n
12
DC
13
C
author_and_software_defined_assembly
PISA
4
tetrameric
gel filtration
5110
-19
18060
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
30
A
N
TYR
30
A
O
LEU
33
A
O
LEU
33
A
N
LYS
36
A
N
LYS
36
A
O
ALA
51
A
O
ALA
51
A
N
PHE
50
A
N
PHE
50
A
O
ILE
67
A
O
ILE
67
A
N
LEU
68
A
N
LEU
68
A
O
VAL
77
A
O
VAL
77
A
N
LEU
78
A
N
LEU
78
A
O
CYS
124
A
O
CYS
124
B
N
TYR
30
B
N
TYR
30
B
O
LEU
33
B
O
LEU
33
B
N
LYS
36
B
N
LYS
36
B
O
ALA
51
B
O
ALA
51
B
N
PHE
50
B
N
PHE
50
B
O
ILE
67
B
O
ILE
67
B
N
LEU
68
B
N
LEU
68
B
O
VAL
77
B
O
VAL
77
B
N
LEU
76
B
N
LEU
76
B
O
GLN
126
B
O
GLN
126
1
A
CG
MET
1
A
CG
MET
1
1
Y
1
A
SD
MET
1
A
SD
MET
1
1
Y
1
A
CE
MET
1
A
CE
MET
1
1
Y
1
A
OE1
GLN
17
A
OE1
GLN
17
1
Y
1
A
NE2
GLN
17
A
NE2
GLN
17
1
Y
1
A
CD
ARG
19
A
CD
ARG
19
1
Y
1
A
NE
ARG
19
A
NE
ARG
19
1
Y
1
A
CZ
ARG
19
A
CZ
ARG
19
1
Y
1
A
NH1
ARG
19
A
NH1
ARG
19
1
Y
1
A
NH2
ARG
19
A
NH2
ARG
19
1
Y
1
A
NZ
LYS
36
A
NZ
LYS
36
1
Y
1
A
CG
GLU
55
A
CG
GLU
55
1
Y
1
A
CD
GLU
55
A
CD
GLU
55
1
Y
1
A
OE1
GLU
55
A
OE1
GLU
55
1
Y
1
A
OE2
GLU
55
A
OE2
GLU
55
1
Y
1
A
CG
GLU
87
A
CG
GLU
87
1
Y
1
A
CD
GLU
87
A
CD
GLU
87
1
Y
1
A
OE1
GLU
87
A
OE1
GLU
87
1
Y
1
A
OE2
GLU
87
A
OE2
GLU
87
1
Y
1
A
CG
GLN
93
A
CG
GLN
93
1
Y
1
A
CD
GLN
93
A
CD
GLN
93
1
Y
1
A
OE1
GLN
93
A
OE1
GLN
93
1
Y
1
A
NE2
GLN
93
A
NE2
GLN
93
1
Y
1
A
OG
SER
95
A
OG
SER
95
1
Y
1
A
OG
SER
96
A
OG
SER
96
1
Y
1
A
CE
LYS
115
A
CE
LYS
115
1
Y
1
A
NZ
LYS
115
A
NZ
LYS
115
1
Y
1
A
NZ
LYS
127
A
NZ
LYS
127
1
Y
1
A
CG
GLN
130
A
CG
GLN
130
1
Y
1
A
CD
GLN
130
A
CD
GLN
130
1
Y
1
A
OE1
GLN
130
A
OE1
GLN
130
1
Y
1
A
NE2
GLN
130
A
NE2
GLN
130
1
Y
1
B
CE
LYS
13
B
CE
LYS
13
1
Y
1
B
NZ
LYS
13
B
NZ
LYS
13
1
Y
1
B
CD
ARG
19
B
CD
ARG
19
1
Y
1
B
NE
ARG
19
B
NE
ARG
19
1
Y
1
B
CZ
ARG
19
B
CZ
ARG
19
1
Y
1
B
NH1
ARG
19
B
NH1
ARG
19
1
Y
1
B
NH2
ARG
19
B
NH2
ARG
19
1
Y
1
B
CE
LYS
24
B
CE
LYS
24
1
Y
1
B
NZ
LYS
24
B
NZ
LYS
24
1
Y
1
B
CG
GLU
55
B
CG
GLU
55
1
Y
1
B
CD
GLU
55
B
CD
GLU
55
1
Y
1
B
OE1
GLU
55
B
OE1
GLU
55
1
Y
1
B
OE2
GLU
55
B
OE2
GLU
55
1
Y
1
B
CG
HIS
89
B
CG
HIS
89
1
Y
1
B
ND1
HIS
89
B
ND1
HIS
89
1
Y
1
B
CD2
HIS
89
B
CD2
HIS
89
1
Y
1
B
CE1
HIS
89
B
CE1
HIS
89
1
Y
1
B
NE2
HIS
89
B
NE2
HIS
89
1
Y
1
B
CD
GLN
91
B
CD
GLN
91
1
Y
1
B
OE1
GLN
91
B
OE1
GLN
91
1
Y
1
B
NE2
GLN
91
B
NE2
GLN
91
1
Y
1
B
OG
SER
95
B
OG
SER
95
1
Y
1
B
NZ
LYS
100
B
NZ
LYS
100
1
Y
1
B
CE
LYS
115
B
CE
LYS
115
1
Y
1
B
NZ
LYS
115
B
NZ
LYS
115
1
Y
1
B
CG
GLN
130
B
CG
GLN
130
1
Y
1
B
CD
GLN
130
B
CD
GLN
130
1
Y
1
B
OE1
GLN
130
B
OE1
GLN
130
1
Y
1
B
NE2
GLN
130
B
NE2
GLN
130
1
Y
1
B
CG
ARG
136
B
CG
ARG
136
1
Y
1
B
CD
ARG
136
B
CD
ARG
136
1
Y
1
B
NE
ARG
136
B
NE
ARG
136
1
Y
1
B
CZ
ARG
136
B
CZ
ARG
136
1
Y
1
B
NH1
ARG
136
B
NH1
ARG
136
1
Y
1
B
NH2
ARG
136
B
NH2
ARG
136
1
Y
1
B
CG
LYS
156
B
CG
LYS
156
1
Y
1
B
CD
LYS
156
B
CD
LYS
156
1
Y
1
B
CE
LYS
156
B
CE
LYS
156
1
Y
1
B
NZ
LYS
156
B
NZ
LYS
156
1
Y
1
A
ILE
159
A
ILE
159
1
Y
1
A
PRO
160
A
PRO
160
1
Y
1
A
PRO
161
A
PRO
161
1
Y
1
A
LEU
162
A
LEU
162
1
Y
1
A
GLU
163
A
GLU
163
1
Y
1
A
GLY
164
A
GLY
164
1
Y
1
A
HIS
165
A
HIS
165
1
Y
1
A
HIS
166
A
HIS
166
1
Y
1
A
HIS
167
A
HIS
167
1
Y
1
A
HIS
168
A
HIS
168
1
Y
1
A
HIS
169
A
HIS
169
1
Y
1
A
HIS
170
A
HIS
170
1
Y
1
B
ILE
159
B
ILE
159
1
Y
1
B
PRO
160
B
PRO
160
1
Y
1
B
PRO
161
B
PRO
161
1
Y
1
B
LEU
162
B
LEU
162
1
Y
1
B
GLU
163
B
GLU
163
1
Y
1
B
GLY
164
B
GLY
164
1
Y
1
B
HIS
165
B
HIS
165
1
Y
1
B
HIS
166
B
HIS
166
1
Y
1
B
HIS
167
B
HIS
167
1
Y
1
B
HIS
168
B
HIS
168
1
Y
1
B
HIS
169
B
HIS
169
1
Y
1
B
HIS
170
B
HIS
170
1
Y
1
B
B
O
O
HOH
HOH
351
356
2.14
1
9.36
1.40
123.60
132.96
B
B
B
CD
NE
CZ
ARG
ARG
ARG
34
34
34
N
1
7.59
0.50
120.30
127.89
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
1
-10.18
0.50
120.30
110.12
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
34
34
34
N
1
8.19
1.10
110.50
118.69
D
D
D
O3'
P
OP2
DC
DT
DT
3
4
4
B
B
B
Y
1
8.70
1.20
119.70
128.40
C
C
C
C3'
O3'
P
DT
DT
DA
10
10
11
A
A
A
Y
1
D
D
O3'
P
DC
DT
3
4
-0.099
0.012
1.607
1.508
B
B
Y
1
C
C
P
OP1
DT
DT
10
10
-0.133
0.017
1.485
1.352
A
A
N
1
C
C
P
OP2
DT
DT
10
10
-0.106
0.017
1.485
1.379
A
A
N
1
C
C
P
OP1
DA
DA
11
11
-0.117
0.017
1.485
1.368
A
A
N
1
C
C
P
O5'
DA
DA
11
11
-0.064
0.010
1.593
1.529
A
A
N
1
C
C
O3'
P
DA
DG
11
12
-0.083
0.012
1.607
1.524
A
A
Y
1
A
B
O
O
HOH
HOH
328
316
2.13
1_555
2_555
1
A
ASP
25
-89.06
38.43
1
A
ASN
61
-161.29
90.16
1
A
TYR
64
-176.30
144.02
1
A
SER
96
-103.34
-78.59
1
A
ALA
123
-107.71
-60.85
1
B
ASP
25
-88.50
46.58
1
B
ASN
61
-160.38
89.72
1
B
TYR
64
-174.54
144.70
1
B
SER
95
-96.65
-80.45
0.2053
0.1673
0.1712
1.600
35.089
9430
92903
10.15
99.49
0.19
1
FREE R-VALUE
0.86
MOLECULAR REPLACEMENT
22.72
0.90
1.11
3ssc
1.600
35.089
370
3367
0
488
2509
0.010
3674
1.046
5187
19.914
1373
0.064
550
0.005
498
0.3371
0.2998
1.6182
319
2760
99.00
0.3223
0.2781
1.6372
279
2841
100.00
0.3209
0.2684
1.6572
350
2777
100.00
0.3267
0.2712
1.6782
339
2770
100.00
0.2976
0.2494
1.7003
292
2801
100.00
0.2946
0.2277
1.7236
270
2848
100.00
0.2811
0.2195
1.7482
321
2775
100.00
0.2530
0.2188
1.7743
327
2742
100.00
0.2821
0.2139
1.8020
325
2844
100.00
0.2484
0.2075
1.8315
276
2823
100.00
0.2630
0.1973
1.8631
352
2729
100.00
0.2462
0.1774
1.8970
341
2817
100.00
0.2309
0.1838
1.9335
299
2801
100.00
0.2204
0.1686
1.9729
270
2802
100.00
0.2347
0.1601
2.0158
314
2849
100.00
0.2301
0.1663
2.0627
307
2773
100.00
0.2384
0.1680
2.1143
312
2815
100.00
0.2253
0.1644
2.1715
308
2782
100.00
0.2108
0.1561
2.2354
315
2791
100.00
0.1930
0.1523
2.3075
310
2803
100.00
0.1951
0.1517
2.3899
312
2838
100.00
0.2104
0.1562
2.4856
335
2762
100.00
0.1875
0.1538
2.5987
306
2793
100.00
0.2044
0.1703
2.7357
349
2751
100.00
0.1992
0.1655
2.9070
308
2761
99.00
0.2196
0.1646
3.1313
299
2789
99.00
0.1752
0.1543
3.4462
313
2743
98.00
0.1664
0.1429
3.9443
341
2727
98.00
0.1529
0.1279
4.9671
321
2719
98.00
0.1728
0.1721
35.0970
320
2647
96.00
29.46
1.6
35.09
6GCE
92903
0.054
1
17.15
6.3
99.62
0.448
1.600
1.657
2.39
9718
1
6.2
99.92
refinement
PHENIX
1.8.3_1479
data reduction
XDS
data scaling
SCALA
phasing
MOLREP
N
DNA binding domain of restriction endonuclease McrBC in complex with 5-formylcytosine DNA
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
ILE
4
A
ILE
4
HELX_P
A
GLN
18
A
GLN
18
1
AA1
15
A
LYS
71
A
LYS
71
HELX_P
A
PHE
73
A
PHE
73
5
AA2
3
A
THR
101
A
THR
101
HELX_P
A
GLY
111
A
GLY
111
1
AA3
11
A
ASP
133
A
ASP
133
HELX_P
A
PHE
152
A
PHE
152
1
AA4
20
B
ILE
4
B
ILE
4
HELX_P
B
GLN
18
B
GLN
18
1
AA5
15
B
LYS
71
B
LYS
71
HELX_P
B
PHE
73
B
PHE
73
5
AA6
3
B
THR
101
B
THR
101
HELX_P
B
GLY
111
B
GLY
111
1
AA7
11
B
SER
129
B
SER
129
HELX_P
B
GLY
131
B
GLY
131
5
AA8
3
B
ASP
133
B
ASP
133
HELX_P
B
LYS
149
B
LYS
149
1
AA9
17
covale
1.606
both
A
A
D
DA
5
C
O3'
DA
4
1_555
D
5FC
6
C
P
5FC
5
1_555
covale
1.606
both
B
B
D
DA
5
C
O3'
DA
4
1_555
D
5FC
6
C
P
5FC
5
1_555
covale
1.605
both
A
A
D
5FC
6
C
O3'
5FC
5
1_555
D
DC
7
C
P
DC
6
1_555
covale
1.605
both
B
B
D
5FC
6
C
O3'
5FC
5
1_555
D
DC
7
C
P
DC
6
1_555
hydrog
WATSON-CRICK
A
A
D
DG
2
C
N1
DG
1
1_555
C
DC
13
D
N3
DC
12
1_555
hydrog
WATSON-CRICK
B
B
D
DG
2
C
N1
DG
1
1_555
C
DC
13
D
N3
DC
12
1_555
hydrog
WATSON-CRICK
A
A
D
DG
2
C
N2
DG
1
1_555
C
DC
13
D
O2
DC
12
1_555
hydrog
WATSON-CRICK
B
B
D
DG
2
C
N2
DG
1
1_555
C
DC
13
D
O2
DC
12
1_555
hydrog
WATSON-CRICK
A
A
D
DG
2
C
O6
DG
1
1_555
C
DC
13
D
N4
DC
12
1_555
hydrog
WATSON-CRICK
B
B
D
DG
2
C
O6
DG
1
1_555
C
DC
13
D
N4
DC
12
1_555
hydrog
WATSON-CRICK
A
A
D
DC
3
C
N3
DC
2
1_555
C
DG
12
D
N1
DG
11
1_555
hydrog
WATSON-CRICK
B
B
D
DC
3
C
N3
DC
2
1_555
C
DG
12
D
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
A
D
DC
3
C
N4
DC
2
1_555
C
DG
12
D
O6
DG
11
1_555
hydrog
WATSON-CRICK
B
B
D
DC
3
C
N4
DC
2
1_555
C
DG
12
D
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
A
D
DC
3
C
O2
DC
2
1_555
C
DG
12
D
N2
DG
11
1_555
hydrog
WATSON-CRICK
B
B
D
DC
3
C
O2
DC
2
1_555
C
DG
12
D
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
A
D
DT
4
C
N3
DT
3
1_555
C
DA
11
D
N1
DA
10
1_555
hydrog
WATSON-CRICK
B
B
D
DT
4
C
N3
DT
3
1_555
C
DA
11
D
N1
DA
10
1_555
hydrog
WATSON-CRICK
A
A
D
DT
4
C
O4
DT
3
1_555
C
DA
11
D
N6
DA
10
1_555
hydrog
WATSON-CRICK
B
B
D
DT
4
C
O4
DT
3
1_555
C
DA
11
D
N6
DA
10
1_555
hydrog
WATSON-CRICK
A
A
D
DA
5
C
N1
DA
4
1_555
C
DT
10
D
N3
DT
9
1_555
hydrog
WATSON-CRICK
B
B
D
DA
5
C
N1
DA
4
1_555
C
DT
10
D
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
A
D
DA
5
C
N6
DA
4
1_555
C
DT
10
D
O4
DT
9
1_555
hydrog
WATSON-CRICK
B
B
D
DA
5
C
N6
DA
4
1_555
C
DT
10
D
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
A
D
DC
7
C
N3
DC
6
1_555
C
DG
8
D
N1
DG
7
1_555
hydrog
WATSON-CRICK
B
B
D
DC
7
C
N3
DC
6
1_555
C
DG
8
D
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
A
D
DC
7
C
N4
DC
6
1_555
C
DG
8
D
O6
DG
7
1_555
hydrog
WATSON-CRICK
B
B
D
DC
7
C
N4
DC
6
1_555
C
DG
8
D
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
A
D
DC
7
C
O2
DC
6
1_555
C
DG
8
D
N2
DG
7
1_555
hydrog
WATSON-CRICK
B
B
D
DC
7
C
O2
DC
6
1_555
C
DG
8
D
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
A
D
DG
8
C
N1
DG
7
1_555
C
DC
7
D
N3
DC
6
1_555
hydrog
WATSON-CRICK
B
B
D
DG
8
C
N1
DG
7
1_555
C
DC
7
D
N3
DC
6
1_555
hydrog
WATSON-CRICK
A
A
D
DG
8
C
N2
DG
7
1_555
C
DC
7
D
O2
DC
6
1_555
hydrog
WATSON-CRICK
B
B
D
DG
8
C
N2
DG
7
1_555
C
DC
7
D
O2
DC
6
1_555
hydrog
WATSON-CRICK
A
A
D
DG
8
C
O6
DG
7
1_555
C
DC
7
D
N4
DC
6
1_555
hydrog
WATSON-CRICK
B
B
D
DG
8
C
O6
DG
7
1_555
C
DC
7
D
N4
DC
6
1_555
hydrog
WATSON-CRICK
A
A
D
DT
10
C
N3
DT
9
1_555
C
DA
5
D
N1
DA
4
1_555
hydrog
WATSON-CRICK
B
B
D
DT
10
C
N3
DT
9
1_555
C
DA
5
D
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
A
D
DT
10
C
O4
DT
9
1_555
C
DA
5
D
N6
DA
4
1_555
hydrog
WATSON-CRICK
B
B
D
DT
10
C
O4
DT
9
1_555
C
DA
5
D
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
A
D
DC
11
C
N3
DC
10
1_555
C
DG
4
D
N1
DG
3
1_555
hydrog
WATSON-CRICK
B
B
D
DC
11
C
N3
DC
10
1_555
C
DG
4
D
N1
DG
3
1_555
hydrog
WATSON-CRICK
A
A
D
DC
11
C
N4
DC
10
1_555
C
DG
4
D
O6
DG
3
1_555
hydrog
WATSON-CRICK
B
B
D
DC
11
C
N4
DC
10
1_555
C
DG
4
D
O6
DG
3
1_555
hydrog
WATSON-CRICK
A
A
D
DC
11
C
O2
DC
10
1_555
C
DG
4
D
N2
DG
3
1_555
hydrog
WATSON-CRICK
B
B
D
DC
11
C
O2
DC
10
1_555
C
DG
4
D
N2
DG
3
1_555
hydrog
WATSON-CRICK
A
A
D
DT
12
C
N3
DT
11
1_555
C
DA
3
D
N1
DA
2
1_555
hydrog
WATSON-CRICK
B
B
D
DT
12
C
N3
DT
11
1_555
C
DA
3
D
N1
DA
2
1_555
hydrog
WATSON-CRICK
A
A
D
DT
12
C
O4
DT
11
1_555
C
DA
3
D
N6
DA
2
1_555
hydrog
WATSON-CRICK
B
B
D
DT
12
C
O4
DT
11
1_555
C
DA
3
D
N6
DA
2
1_555
hydrog
WATSON-CRICK
A
A
D
DC
13
C
N3
DC
12
1_555
C
DG
2
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
B
B
D
DC
13
C
N3
DC
12
1_555
C
DG
2
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
A
D
DC
13
C
N4
DC
12
1_555
C
DG
2
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
B
B
D
DC
13
C
N4
DC
12
1_555
C
DG
2
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
A
D
DC
13
C
O2
DC
12
1_555
C
DG
2
D
N2
DG
1
1_555
hydrog
WATSON-CRICK
B
B
D
DC
13
C
O2
DC
12
1_555
C
DG
2
D
N2
DG
1
1_555
DNA BINDING PROTEIN
5-formylcytosine, restriction endonuclease, McrBC, base flipping, DNA BINDING PROTEIN
MCRB_ECOLI
UNP
1
1
P15005
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAY
GISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIP
P
6GCE
PDB
2
1
6GCE
6GCE
PDB
3
1
6GCE
1
161
6GCE
1
161
P15005
A
1
1
161
1
161
6GCE
1
161
P15005
B
1
1
161
2
13
6GCE
2
13
6GCE
D
2
1
12
2
13
6GCE
2
13
6GCE
C
3
1
12
1
expression tag
LEU
162
6GCE
A
P15005
UNP
162
1
expression tag
GLU
163
6GCE
A
P15005
UNP
163
1
expression tag
GLY
164
6GCE
A
P15005
UNP
164
1
expression tag
HIS
165
6GCE
A
P15005
UNP
165
1
expression tag
HIS
166
6GCE
A
P15005
UNP
166
1
expression tag
HIS
167
6GCE
A
P15005
UNP
167
1
expression tag
HIS
168
6GCE
A
P15005
UNP
168
1
expression tag
HIS
169
6GCE
A
P15005
UNP
169
1
expression tag
HIS
170
6GCE
A
P15005
UNP
170
2
expression tag
LEU
162
6GCE
B
P15005
UNP
162
2
expression tag
GLU
163
6GCE
B
P15005
UNP
163
2
expression tag
GLY
164
6GCE
B
P15005
UNP
164
2
expression tag
HIS
165
6GCE
B
P15005
UNP
165
2
expression tag
HIS
166
6GCE
B
P15005
UNP
166
2
expression tag
HIS
167
6GCE
B
P15005
UNP
167
2
expression tag
HIS
168
6GCE
B
P15005
UNP
168
2
expression tag
HIS
169
6GCE
B
P15005
UNP
169
2
expression tag
HIS
170
6GCE
B
P15005
UNP
170
6
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
29
A
SER
29
A
TYR
30
A
TYR
30
A
LEU
33
A
LEU
33
A
SER
38
A
SER
38
A
TRP
49
A
TRP
49
A
LEU
53
A
LEU
53
A
ILE
63
A
ILE
63
A
TYR
70
A
TYR
70
A
GLU
75
A
GLU
75
A
ILE
82
A
ILE
82
A
TYR
121
A
TYR
121
A
LYS
127
A
LYS
127
B
SER
29
B
SER
29
B
TYR
30
B
TYR
30
B
LEU
33
B
LEU
33
B
SER
38
B
SER
38
B
TRP
49
B
TRP
49
B
LEU
53
B
LEU
53
B
ILE
63
B
ILE
63
B
TYR
70
B
TYR
70
B
GLU
75
B
GLU
75
B
ILE
82
B
ILE
82
B
TYR
121
B
TYR
121
B
LYS
127
B
LYS
127
19
P 21 21 21