0.005652 0.000000 0.000000 0.000000 0.005652 0.000000 0.000000 0.000000 0.010584 0.00000 0.00000 0.00000 0000-0003-2968-0081 Zhang, Y. 0000-0002-6460-4845 Baerentsen, R.L. 0000-0002-7462-4612 Gerdes, K. 0000-0002-5413-4667 Brodersen, D.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 176.920 176.920 94.480 2957288.851 C10 H18 N5 O20 P5 683.140 guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N P N 6 N O N 7 N O N 8 N O N 9 N P N 10 N O N 11 N O N 12 N O N 13 N O N 14 N P N 15 N O N 16 N O N 17 N O N 18 N C N 19 R C N 20 N O N 21 S C N 22 N O N 23 R C N 24 N O N 25 R C Y 26 N N Y 27 N C Y 28 N N Y 29 N C N 30 N C N 31 N O N 32 N N N 33 N C N 34 N N N 35 N N Y 36 N C N 37 N P N 38 N O N 39 N O N 40 N O N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N N N 60 S C N 61 N C N 62 N O N 63 N C N 64 N O N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N N N 73 S C N 74 N C N 75 N O N 76 N C N 77 N C N 78 N C N 79 N N N 80 N C N 81 N N N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N N N 100 S C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N O N 106 N N N 107 N O N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 S C N 118 N C N 119 N O N 120 N C N 121 N C N 122 N O N 123 N O N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N N N 133 R C N 134 N C N 135 N O N 136 N C N 137 N S N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 S C N 148 N C N 149 N O N 150 N C N 151 N C N 152 N C N 153 N O N 154 N N N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N O N 174 N O N 175 N O N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 N C N 187 N C N 188 N O N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 N C Y 200 N C Y 201 N N Y 202 N C Y 203 N C Y 204 N N N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N O N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 S C N 224 N C N 225 N C N 226 N C N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N C N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N N N 264 S C N 265 N C N 266 N O N 267 N C N 268 N C N 269 N C N 270 N C N 271 N N N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N C N 294 N S N 295 N C N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N C N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N O N 354 N O N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 R C N 367 N O N 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N N Y 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C N 417 N O N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N C N 436 N C N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 1 N doub N 2 N doub N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N doub N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N doub Y 19 N doub Y 20 N sing N 21 N sing N 22 N sing Y 23 N sing N 24 N sing N 25 N sing Y 26 N sing N 27 N sing N 28 N doub Y 29 N doub N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N doub N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N doub N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N sing N 199 N sing Y 200 N sing Y 201 N doub Y 202 N doub N 203 N sing Y 204 N sing N 205 N sing Y 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N doub N 313 N sing Y 314 N doub N 315 N sing Y 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing Y 377 N doub Y 378 N sing Y 379 N sing N 380 N sing Y 381 N doub Y 382 N sing Y 383 N sing N 384 N sing Y 385 N sing Y 386 N doub N 387 N sing Y 388 N doub N 389 N sing Y 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing Y 405 N doub Y 406 N sing Y 407 N sing N 408 N sing Y 409 N doub N 410 N sing Y 411 N doub N 412 N sing Y 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing US Mol.Cell MOCEFL 2168 1097-2765 74 1239 10.1016/j.molcel.2019.03.035 31023582 (p)ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch. 2019 10.2210/pdb6gfm/pdb pdb_00006gfm 100 1 PIXEL 2017-10-20 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.97623 1.0 P13 (MX1) PETRA III, EMBL c/o DESY 0.97623 SYNCHROTRON PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) 53244.168 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase 3.2.2.-,3.2.2.10,3.2.2.4 1 man polymer 683.140 guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) 1 syn non-polymer 18.015 water 99 nat water AMP nucleosidase,CMP nucleosidase,GMP nucleosidase,IMP nucleosidase,UMP nucleosidase,dTMP nucleosidase no no RGSHHHHHHTDPALRAITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFENFDINV LRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVG EAPNMVVCWGGHSINENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPP NPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFVVH TLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLA ADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICTGLCGR RGSHHHHHHTDPALRAITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFENFDINV LRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVG EAPNMVVCWGGHSINENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPP NPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFVVH TLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLA ADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICTGLCGR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K12 sample 1 474 ppnN, ygdH, b2795, JW2766 83333 Escherichia coli K-12 469008 Escherichia coli BL21(DE3) plasmid Biological sequence 1 3.48 64.64 VAPOR DIFFUSION, SITTING DROP 7.0 0.4M KNa tartrate hydrate 277.15 atom_site citation citation_author database_PDB_rev database_PDB_rev_record diffrn_source pdbx_data_processing_status pdbx_database_proc citation citation_author pdbx_database_proc citation database_PDB_rev database_PDB_rev_record pdbx_database_proc citation_author diffrn_source chem_comp_atom chem_comp_bond database_2 entity_src_gen pdbx_initial_refinement_model repository Initial release Atomic model Data collection Database references Data collection Database references Data collection Database references Data collection Database references Data collection Database references Source and taxonomy Refinement description 1 0 2019-04-24 2 0 2019-05-01 2 1 2019-05-08 2 2 2019-07-03 2 3 2019-07-31 2 4 2023-09-27 2 5 2024-01-17 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.label_atom_id _atom_site.pdbx_auth_atom_name _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.pdbx_database_id_DOI _citation.title _citation.year _diffrn_source.pdbx_synchrotron_site _citation.pdbx_database_id_PubMed _citation.title _citation_author.identifier_ORCID _citation_author.name _citation.journal_volume _citation.page_first _citation_author.name _diffrn_source.pdbx_synchrotron_site _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity_src_gen.pdbx_gene_src_scientific_name Denmark Danish National Research Foundation DNRF120 apo form N PDBE Y PDBE 2018-05-01 REL REL 0O2 guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) HOH water 6GFL PDB experimental model PGP 461 2 0O2 0O2 501 A HOH 66 3 HOH HOH 601 A HOH 13 3 HOH HOH 602 A HOH 12 3 HOH HOH 603 A HOH 60 3 HOH HOH 604 A HOH 92 3 HOH HOH 605 A HOH 136 3 HOH HOH 606 A HOH 101 3 HOH HOH 607 A HOH 33 3 HOH HOH 608 A HOH 97 3 HOH HOH 609 A HOH 126 3 HOH HOH 610 A HOH 39 3 HOH HOH 611 A HOH 19 3 HOH HOH 612 A HOH 153 3 HOH HOH 613 A HOH 6 3 HOH HOH 614 A HOH 98 3 HOH HOH 615 A HOH 93 3 HOH HOH 616 A HOH 1 3 HOH HOH 617 A HOH 7 3 HOH HOH 618 A HOH 9 3 HOH HOH 619 A HOH 38 3 HOH HOH 620 A HOH 132 3 HOH HOH 621 A HOH 75 3 HOH HOH 622 A HOH 56 3 HOH HOH 623 A HOH 124 3 HOH HOH 624 A HOH 2 3 HOH HOH 625 A HOH 42 3 HOH HOH 626 A HOH 41 3 HOH HOH 627 A HOH 118 3 HOH HOH 628 A HOH 79 3 HOH HOH 629 A HOH 49 3 HOH HOH 630 A HOH 111 3 HOH HOH 631 A HOH 65 3 HOH HOH 632 A HOH 21 3 HOH HOH 633 A HOH 43 3 HOH HOH 634 A HOH 5 3 HOH HOH 635 A HOH 59 3 HOH HOH 636 A HOH 120 3 HOH HOH 637 A HOH 34 3 HOH HOH 638 A HOH 105 3 HOH HOH 639 A HOH 122 3 HOH HOH 640 A HOH 27 3 HOH HOH 641 A HOH 112 3 HOH HOH 642 A HOH 4 3 HOH HOH 643 A HOH 103 3 HOH HOH 644 A HOH 22 3 HOH HOH 645 A HOH 78 3 HOH HOH 646 A HOH 44 3 HOH HOH 647 A HOH 95 3 HOH HOH 648 A HOH 113 3 HOH HOH 649 A HOH 87 3 HOH HOH 650 A HOH 15 3 HOH HOH 651 A HOH 14 3 HOH HOH 652 A HOH 154 3 HOH HOH 653 A HOH 11 3 HOH HOH 654 A HOH 23 3 HOH HOH 655 A HOH 96 3 HOH HOH 656 A HOH 18 3 HOH HOH 657 A HOH 144 3 HOH HOH 658 A HOH 45 3 HOH HOH 659 A HOH 58 3 HOH HOH 660 A HOH 114 3 HOH HOH 661 A HOH 85 3 HOH HOH 662 A HOH 67 3 HOH HOH 663 A HOH 53 3 HOH HOH 664 A HOH 145 3 HOH HOH 665 A HOH 68 3 HOH HOH 666 A HOH 91 3 HOH HOH 667 A HOH 69 3 HOH HOH 668 A HOH 40 3 HOH HOH 669 A HOH 28 3 HOH HOH 670 A HOH 146 3 HOH HOH 671 A HOH 24 3 HOH HOH 672 A HOH 148 3 HOH HOH 673 A HOH 31 3 HOH HOH 674 A HOH 57 3 HOH HOH 675 A HOH 72 3 HOH HOH 676 A HOH 73 3 HOH HOH 677 A HOH 89 3 HOH HOH 678 A HOH 135 3 HOH HOH 679 A HOH 139 3 HOH HOH 680 A HOH 152 3 HOH HOH 681 A HOH 29 3 HOH HOH 682 A HOH 99 3 HOH HOH 683 A HOH 55 3 HOH HOH 684 A HOH 88 3 HOH HOH 685 A HOH 10 3 HOH HOH 686 A HOH 77 3 HOH HOH 687 A HOH 37 3 HOH HOH 688 A HOH 32 3 HOH HOH 689 A HOH 86 3 HOH HOH 690 A HOH 149 3 HOH HOH 691 A HOH 47 3 HOH HOH 692 A HOH 83 3 HOH HOH 693 A HOH 100 3 HOH HOH 694 A HOH 138 3 HOH HOH 695 A HOH 137 3 HOH HOH 696 A HOH 141 3 HOH HOH 697 A HOH 25 3 HOH HOH 698 A HOH 127 3 HOH HOH 699 A n 1 -16 A n 2 -15 A n 3 -14 A n 4 -13 A n 5 -12 A n 6 -11 A n 7 -10 A n 8 -9 A n 9 -8 A n 10 -7 A n 11 -6 A n 12 -5 A n 13 -4 A LEU -3 n 14 LEU -3 A ARG -2 n 15 ARG -2 A ALA -1 n 16 ALA -1 A ILE 1 n 17 ILE 1 A THR 2 n 18 THR 2 A HIS 3 n 19 HIS 3 A ILE 4 n 20 ILE 4 A SER 5 n 21 SER 5 A PRO 6 n 22 PRO 6 A LEU 7 n 23 LEU 7 A GLY 8 n 24 GLY 8 A SER 9 n 25 SER 9 A MET 10 n 26 MET 10 A ASP 11 n 27 ASP 11 A MET 12 n 28 MET 12 A LEU 13 n 29 LEU 13 A SER 14 n 30 SER 14 A GLN 15 n 31 GLN 15 A LEU 16 n 32 LEU 16 A GLU 17 n 33 GLU 17 A VAL 18 n 34 VAL 18 A ASP 19 n 35 ASP 19 A MET 20 n 36 MET 20 A LEU 21 n 37 LEU 21 A LYS 22 n 38 LYS 22 A ARG 23 n 39 ARG 23 A THR 24 n 40 THR 24 A ALA 25 n 41 ALA 25 A SER 26 n 42 SER 26 A SER 27 n 43 SER 27 A ASP 28 n 44 ASP 28 A LEU 29 n 45 LEU 29 A TYR 30 n 46 TYR 30 A GLN 31 n 47 GLN 31 A LEU 32 n 48 LEU 32 A PHE 33 n 49 PHE 33 A ARG 34 n 50 ARG 34 A ASN 35 n 51 ASN 35 A CYS 36 n 52 CYS 36 A SER 37 n 53 SER 37 A LEU 38 n 54 LEU 38 A ALA 39 n 55 ALA 39 A VAL 40 n 56 VAL 40 A LEU 41 n 57 LEU 41 A ASN 42 n 58 ASN 42 A SER 43 n 59 SER 43 A GLY 44 n 60 GLY 44 A SER 45 n 61 SER 45 A LEU 46 n 62 LEU 46 A THR 47 n 63 THR 47 A ASP 48 n 64 ASP 48 A ASN 49 n 65 ASN 49 A SER 50 n 66 SER 50 A LYS 51 n 67 LYS 51 A GLU 52 n 68 GLU 52 A LEU 53 n 69 LEU 53 A LEU 54 n 70 LEU 54 A SER 55 n 71 SER 55 A ARG 56 n 72 ARG 56 A PHE 57 n 73 PHE 57 A GLU 58 n 74 GLU 58 A ASN 59 n 75 ASN 59 A PHE 60 n 76 PHE 60 A ASP 61 n 77 ASP 61 A ILE 62 n 78 ILE 62 A ASN 63 n 79 ASN 63 A VAL 64 n 80 VAL 64 A LEU 65 n 81 LEU 65 A ARG 66 n 82 ARG 66 A ARG 67 n 83 ARG 67 A GLU 68 n 84 GLU 68 A ARG 69 n 85 ARG 69 A GLY 70 n 86 GLY 70 A VAL 71 n 87 VAL 71 A LYS 72 n 88 LYS 72 A LEU 73 n 89 LEU 73 A GLU 74 n 90 GLU 74 A LEU 75 n 91 LEU 75 A ILE 76 n 92 ILE 76 A ASN 77 n 93 ASN 77 A PRO 78 n 94 PRO 78 A PRO 79 n 95 PRO 79 A GLU 80 n 96 GLU 80 A GLU 81 n 97 GLU 81 A ALA 82 n 98 ALA 82 A PHE 83 n 99 PHE 83 A VAL 84 n 100 VAL 84 A ASP 85 n 101 ASP 85 A GLY 86 n 102 GLY 86 A ARG 87 n 103 ARG 87 A ILE 88 n 104 ILE 88 A ILE 89 n 105 ILE 89 A ARG 90 n 106 ARG 90 A ALA 91 n 107 ALA 91 A LEU 92 n 108 LEU 92 A GLN 93 n 109 GLN 93 A ALA 94 n 110 ALA 94 A ASN 95 n 111 ASN 95 A LEU 96 n 112 LEU 96 A PHE 97 n 113 PHE 97 A ALA 98 n 114 ALA 98 A VAL 99 n 115 VAL 99 A LEU 100 n 116 LEU 100 A ARG 101 n 117 ARG 101 A ASP 102 n 118 ASP 102 A ILE 103 n 119 ILE 103 A LEU 104 n 120 LEU 104 A PHE 105 n 121 PHE 105 A VAL 106 n 122 VAL 106 A TYR 107 n 123 TYR 107 A GLY 108 n 124 GLY 108 A GLN 109 n 125 GLN 109 A ILE 110 n 126 ILE 110 A HIS 111 n 127 HIS 111 A ASN 112 n 128 ASN 112 A THR 113 n 129 THR 113 A VAL 114 n 130 VAL 114 A ARG 115 n 131 ARG 115 A PHE 116 n 132 PHE 116 A PRO 117 n 133 PRO 117 A ASN 118 n 134 ASN 118 A LEU 119 n 135 LEU 119 A ASN 120 n 136 ASN 120 A LEU 121 n 137 LEU 121 A ASP 122 n 138 ASP 122 A ASN 123 n 139 ASN 123 A SER 124 n 140 SER 124 A VAL 125 n 141 VAL 125 A HIS 126 n 142 HIS 126 A ILE 127 n 143 ILE 127 A THR 128 n 144 THR 128 A ASN 129 n 145 ASN 129 A LEU 130 n 146 LEU 130 A VAL 131 n 147 VAL 131 A PHE 132 n 148 PHE 132 A SER 133 n 149 SER 133 A ILE 134 n 150 ILE 134 A LEU 135 n 151 LEU 135 A ARG 136 n 152 ARG 136 A ASN 137 n 153 ASN 137 A ALA 138 n 154 ALA 138 A ARG 139 n 155 ARG 139 A ALA 140 n 156 ALA 140 A LEU 141 n 157 LEU 141 A HIS 142 n 158 HIS 142 A VAL 143 n 159 VAL 143 A GLY 144 n 160 GLY 144 A GLU 145 n 161 GLU 145 A ALA 146 n 162 ALA 146 A PRO 147 n 163 PRO 147 A ASN 148 n 164 ASN 148 A MET 149 n 165 MET 149 A VAL 150 n 166 VAL 150 A VAL 151 n 167 VAL 151 A CYS 152 n 168 CYS 152 A TRP 153 n 169 TRP 153 A GLY 154 n 170 GLY 154 A GLY 155 n 171 GLY 155 A HIS 156 n 172 HIS 156 A SER 157 n 173 SER 157 A ILE 158 n 174 ILE 158 A ASN 159 n 175 ASN 159 A GLU 160 n 176 GLU 160 A ASN 161 n 177 ASN 161 A GLU 162 n 178 GLU 162 A TYR 163 n 179 TYR 163 A LEU 164 n 180 LEU 164 A TYR 165 n 181 TYR 165 A ALA 166 n 182 ALA 166 A ARG 167 n 183 ARG 167 A ARG 168 n 184 ARG 168 A VAL 169 n 185 VAL 169 A GLY 170 n 186 GLY 170 A ASN 171 n 187 ASN 171 A GLN 172 n 188 GLN 172 A LEU 173 n 189 LEU 173 A GLY 174 n 190 GLY 174 A LEU 175 n 191 LEU 175 A ARG 176 n 192 ARG 176 A GLU 177 n 193 GLU 177 A LEU 178 n 194 LEU 178 A ASN 179 n 195 ASN 179 A ILE 180 n 196 ILE 180 A CYS 181 n 197 CYS 181 A THR 182 n 198 THR 182 A GLY 183 n 199 GLY 183 A CYS 184 n 200 CYS 184 A GLY 185 n 201 GLY 185 A PRO 186 n 202 PRO 186 A GLY 187 n 203 GLY 187 A ALA 188 n 204 ALA 188 A MET 189 n 205 MET 189 A GLU 190 n 206 GLU 190 A ALA 191 n 207 ALA 191 A PRO 192 n 208 PRO 192 A MET 193 n 209 MET 193 A LYS 194 n 210 LYS 194 A GLY 195 n 211 GLY 195 A ALA 196 n 212 ALA 196 A ALA 197 n 213 ALA 197 A VAL 198 n 214 VAL 198 A GLY 199 n 215 GLY 199 A HIS 200 n 216 HIS 200 A ALA 201 n 217 ALA 201 A GLN 202 n 218 GLN 202 A GLN 203 n 219 GLN 203 A ARG 204 n 220 ARG 204 A TYR 205 n 221 TYR 205 A LYS 206 n 222 LYS 206 A ASP 207 n 223 ASP 207 A SER 208 n 224 SER 208 A ARG 209 n 225 ARG 209 A PHE 210 n 226 PHE 210 A ILE 211 n 227 ILE 211 A GLY 212 n 228 GLY 212 A MET 213 n 229 MET 213 A THR 214 n 230 THR 214 A GLU 215 n 231 GLU 215 A PRO 216 n 232 PRO 216 A SER 217 n 233 SER 217 A ILE 218 n 234 ILE 218 A ILE 219 n 235 ILE 219 A ALA 220 n 236 ALA 220 A ALA 221 n 237 ALA 221 A GLU 222 n 238 GLU 222 A PRO 223 n 239 PRO 223 A PRO 224 n 240 PRO 224 A ASN 225 n 241 ASN 225 A PRO 226 n 242 PRO 226 A LEU 227 n 243 LEU 227 A VAL 228 n 244 VAL 228 A ASN 229 n 245 ASN 229 A GLU 230 n 246 GLU 230 A LEU 231 n 247 LEU 231 A ILE 232 n 248 ILE 232 A ILE 233 n 249 ILE 233 A MET 234 n 250 MET 234 A PRO 235 n 251 PRO 235 A ASP 236 n 252 ASP 236 A ILE 237 n 253 ILE 237 A GLU 238 n 254 GLU 238 A LYS 239 n 255 LYS 239 A ARG 240 n 256 ARG 240 A LEU 241 n 257 LEU 241 A GLU 242 n 258 GLU 242 A ALA 243 n 259 ALA 243 A PHE 244 n 260 PHE 244 A VAL 245 n 261 VAL 245 A ARG 246 n 262 ARG 246 A ILE 247 n 263 ILE 247 A ALA 248 n 264 ALA 248 A HIS 249 n 265 HIS 249 A GLY 250 n 266 GLY 250 A ILE 251 n 267 ILE 251 A ILE 252 n 268 ILE 252 A ILE 253 n 269 ILE 253 A PHE 254 n 270 PHE 254 A PRO 255 n 271 PRO 255 A GLY 256 n 272 GLY 256 A GLY 257 n 273 GLY 257 A VAL 258 n 274 VAL 258 A GLY 259 n 275 GLY 259 A THR 260 n 276 THR 260 A ALA 261 n 277 ALA 261 A GLU 262 n 278 GLU 262 A GLU 263 n 279 GLU 263 A LEU 264 n 280 LEU 264 A LEU 265 n 281 LEU 265 A TYR 266 n 282 TYR 266 A LEU 267 n 283 LEU 267 A LEU 268 n 284 LEU 268 A GLY 269 n 285 GLY 269 A ILE 270 n 286 ILE 270 A LEU 271 n 287 LEU 271 A MET 272 n 288 MET 272 A ASN 273 n 289 ASN 273 A PRO 274 n 290 PRO 274 A ALA 275 n 291 ALA 275 A ASN 276 n 292 ASN 276 A LYS 277 n 293 LYS 277 A ASP 278 n 294 ASP 278 A GLN 279 n 295 GLN 279 A VAL 280 n 296 VAL 280 A LEU 281 n 297 LEU 281 A PRO 282 n 298 PRO 282 A LEU 283 n 299 LEU 283 A ILE 284 n 300 ILE 284 A LEU 285 n 301 LEU 285 A THR 286 n 302 THR 286 A GLY 287 n 303 GLY 287 A PRO 288 n 304 PRO 288 A LYS 289 n 305 LYS 289 A GLU 290 n 306 GLU 290 A SER 291 n 307 SER 291 A ALA 292 n 308 ALA 292 A ASP 293 n 309 ASP 293 A TYR 294 n 310 TYR 294 A PHE 295 n 311 PHE 295 A ARG 296 n 312 ARG 296 A VAL 297 n 313 VAL 297 A LEU 298 n 314 LEU 298 A ASP 299 n 315 ASP 299 A GLU 300 n 316 GLU 300 A PHE 301 n 317 PHE 301 A VAL 302 n 318 VAL 302 A VAL 303 n 319 VAL 303 A HIS 304 n 320 HIS 304 A THR 305 n 321 THR 305 A LEU 306 n 322 LEU 306 A GLY 307 n 323 GLY 307 A GLU 308 n 324 GLU 308 A ASN 309 n 325 ASN 309 A ALA 310 n 326 ALA 310 A ARG 311 n 327 ARG 311 A ARG 312 n 328 ARG 312 A HIS 313 n 329 HIS 313 A TYR 314 n 330 TYR 314 A ARG 315 n 331 ARG 315 A ILE 316 n 332 ILE 316 A ILE 317 n 333 ILE 317 A ILE 318 n 334 ILE 318 A ASP 319 n 335 ASP 319 A ASP 320 n 336 ASP 320 A ALA 321 n 337 ALA 321 A ALA 322 n 338 ALA 322 A GLU 323 n 339 GLU 323 A VAL 324 n 340 VAL 324 A ALA 325 n 341 ALA 325 A ARG 326 n 342 ARG 326 A GLN 327 n 343 GLN 327 A MET 328 n 344 MET 328 A LYS 329 n 345 LYS 329 A LYS 330 n 346 LYS 330 A SER 331 n 347 SER 331 A MET 332 n 348 MET 332 A PRO 333 n 349 PRO 333 A LEU 334 n 350 LEU 334 A VAL 335 n 351 VAL 335 A LYS 336 n 352 LYS 336 A GLU 337 n 353 GLU 337 A ASN 338 n 354 ASN 338 A ARG 339 n 355 ARG 339 A ARG 340 n 356 ARG 340 A ASP 341 n 357 ASP 341 A THR 342 n 358 THR 342 A GLY 343 n 359 GLY 343 A ASP 344 n 360 ASP 344 A ALA 345 n 361 ALA 345 A TYR 346 n 362 TYR 346 A SER 347 n 363 SER 347 A PHE 348 n 364 PHE 348 A ASN 349 n 365 ASN 349 A TRP 350 n 366 TRP 350 A SER 351 n 367 SER 351 A MET 352 n 368 MET 352 A ARG 353 n 369 ARG 353 A ILE 354 n 370 ILE 354 A ALA 355 n 371 ALA 355 A PRO 356 n 372 PRO 356 A ASP 357 n 373 ASP 357 A LEU 358 n 374 LEU 358 A GLN 359 n 375 GLN 359 A MET 360 n 376 MET 360 A PRO 361 n 377 PRO 361 A PHE 362 n 378 PHE 362 A GLU 363 n 379 GLU 363 A PRO 364 n 380 PRO 364 A SER 365 n 381 SER 365 A HIS 366 n 382 HIS 366 A GLU 367 n 383 GLU 367 A ASN 368 n 384 ASN 368 A MET 369 n 385 MET 369 A ALA 370 n 386 ALA 370 A ASN 371 n 387 ASN 371 A LEU 372 n 388 LEU 372 A LYS 373 n 389 LYS 373 A LEU 374 n 390 LEU 374 A TYR 375 n 391 TYR 375 A PRO 376 n 392 PRO 376 A ASP 377 n 393 ASP 377 A GLN 378 n 394 GLN 378 A PRO 379 n 395 PRO 379 A VAL 380 n 396 VAL 380 A GLU 381 n 397 GLU 381 A VAL 382 n 398 VAL 382 A LEU 383 n 399 LEU 383 A ALA 384 n 400 ALA 384 A ALA 385 n 401 ALA 385 A ASP 386 n 402 ASP 386 A LEU 387 n 403 LEU 387 A ARG 388 n 404 ARG 388 A ARG 389 n 405 ARG 389 A ALA 390 n 406 ALA 390 A PHE 391 n 407 PHE 391 A SER 392 n 408 SER 392 A GLY 393 n 409 GLY 393 A ILE 394 n 410 ILE 394 A VAL 395 n 411 VAL 395 A ALA 396 n 412 ALA 396 A GLY 397 n 413 GLY 397 A ASN 398 n 414 ASN 398 A VAL 399 n 415 VAL 399 A LYS 400 n 416 LYS 400 A GLU 401 n 417 GLU 401 A VAL 402 n 418 VAL 402 A GLY 403 n 419 GLY 403 A ILE 404 n 420 ILE 404 A ARG 405 n 421 ARG 405 A ALA 406 n 422 ALA 406 A ILE 407 n 423 ILE 407 A GLU 408 n 424 GLU 408 A GLU 409 n 425 GLU 409 A PHE 410 n 426 PHE 410 A GLY 411 n 427 GLY 411 A PRO 412 n 428 PRO 412 A TYR 413 n 429 TYR 413 A LYS 414 n 430 LYS 414 A ILE 415 n 431 ILE 415 A ASN 416 n 432 ASN 416 A GLY 417 n 433 GLY 417 A ASP 418 n 434 ASP 418 A LYS 419 n 435 LYS 419 A GLU 420 n 436 GLU 420 A ILE 421 n 437 ILE 421 A MET 422 n 438 MET 422 A ARG 423 n 439 ARG 423 A ARG 424 n 440 ARG 424 A MET 425 n 441 MET 425 A ASP 426 n 442 ASP 426 A ASP 427 n 443 ASP 427 A LEU 428 n 444 LEU 428 A LEU 429 n 445 LEU 429 A GLN 430 n 446 GLN 430 A GLY 431 n 447 GLY 431 A PHE 432 n 448 PHE 432 A VAL 433 n 449 VAL 433 A ALA 434 n 450 ALA 434 A GLN 435 n 451 GLN 435 A HIS 436 n 452 HIS 436 A ARG 437 n 453 ARG 437 A n 454 438 A n 455 439 A n 456 440 A n 457 441 A n 458 442 A n 459 443 A n 460 444 A n 461 445 A n 462 446 A n 463 447 A n 464 448 A n 465 449 A n 466 450 A n 467 451 A n 468 452 A n 469 453 A n 470 454 A n 471 455 A n 472 456 A n 473 457 A n 474 458 A author_and_software_defined_assembly PISA 1 monomeric gel filtration 0 0 21010 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 4 A N ILE 20 A O LEU 73 A O LEU 89 A O LYS 72 A O LYS 88 A N LEU 65 A N LEU 81 A N VAL 84 A N VAL 100 A O ARG 87 A O ARG 103 A O ILE 232 A O ILE 248 A N THR 214 A N THR 230 A O MET 213 A O MET 229 A N THR 182 A N THR 198 A O CYS 181 A O CYS 197 A N CYS 152 A N CYS 168 A N VAL 151 A N VAL 167 A O GLY 250 A O GLY 266 A N ILE 251 A N ILE 267 A O ILE 284 A O ILE 300 A N LEU 285 A N LEU 301 A O ARG 315 A O ARG 331 1 A HOH 658 C HOH 1 A ARG -16 A ARG 1 1 Y 1 A GLY -15 A GLY 2 1 Y 1 A SER -14 A SER 3 1 Y 1 A HIS -13 A HIS 4 1 Y 1 A HIS -12 A HIS 5 1 Y 1 A HIS -11 A HIS 6 1 Y 1 A HIS -10 A HIS 7 1 Y 1 A HIS -9 A HIS 8 1 Y 1 A HIS -8 A HIS 9 1 Y 1 A THR -7 A THR 10 1 Y 1 A ASP -6 A ASP 11 1 Y 1 A PRO -5 A PRO 12 1 Y 1 A ALA -4 A ALA 13 1 Y 1 A MET 438 A MET 454 1 Y 1 A LYS 439 A LYS 455 1 Y 1 A LEU 440 A LEU 456 1 Y 1 A PRO 441 A PRO 457 1 Y 1 A GLY 442 A GLY 458 1 Y 1 A SER 443 A SER 459 1 Y 1 A ALA 444 A ALA 460 1 Y 1 A TYR 445 A TYR 461 1 Y 1 A ILE 446 A ILE 462 1 Y 1 A PRO 447 A PRO 463 1 Y 1 A CYS 448 A CYS 464 1 Y 1 A TYR 449 A TYR 465 1 Y 1 A GLU 450 A GLU 466 1 Y 1 A ILE 451 A ILE 467 1 Y 1 A CYS 452 A CYS 468 1 Y 1 A THR 453 A THR 469 1 Y 1 A GLY 454 A GLY 470 1 Y 1 A LEU 455 A LEU 471 1 Y 1 A CYS 456 A CYS 472 1 Y 1 A GLY 457 A GLY 473 1 Y 1 A ARG 458 A ARG 474 1 Y 1 A A OG OE1 SER GLN 124 359 2.14 1 A PHE 57 -113.32 72.50 1 A GLU 81 -57.41 -8.64 1 A ASN 112 -54.41 102.56 1 A ASN 118 -54.55 105.00 1 A ASN 120 -65.55 87.78 1 A ASN 148 -146.41 14.98 1 A ASN 371 -92.17 34.39 1 A ALA 396 -81.77 30.99 1 A LYS 414 45.10 75.26 0.2319 0.1813 2.77 34.7 19329 99.74 1 FREE R-VALUE MOLECULAR REPLACEMENT 6GFL 2.77 34.7 99 3610 40 0 3471 84.07 2.77 34.7 6GFM 19332 0.99 0.1421 0.029 0.1451 1 17.45 24.8 99.77 2.704 2.77 2.869 1.35 1907 0.58 0.6416 2.781 1 18.2 99.74 refinement PHENIX data reduction XDS data scaling XSCALE phasing PHENIX 98 tetragonal I 41 2 2 I 4bw 2bw x,y,z -y+1/2,x,z+3/4 y+1/2,-x,z+3/4 x+1/2,-y,-z+3/4 -x+1/2,y,-z+3/4 -x,-y,z y,x,-z -y,-x,-z x+1/2,y+1/2,z+1/2 -y+1,x+1/2,z+5/4 y+1,-x+1/2,z+5/4 x+1,-y+1/2,-z+5/4 -x+1,y+1/2,-z+5/4 -x+1/2,-y+1/2,z+1/2 y+1/2,x+1/2,-z+1/2 -y+1/2,-x+1/2,-z+1/2 N Crystal structure of the Escherichia coli nucleosidase PpnN (pppGpp-form) 1 N N 2 N N 3 N N A SER 14 A SER 30 HELX_P A ALA 25 A ALA 41 1 AA1 12 A SER 26 A SER 42 HELX_P A ASP 28 A ASP 44 5 AA2 3 A LEU 29 A LEU 45 HELX_P A LEU 41 A LEU 57 1 AA3 13 A ASN 49 A ASN 65 HELX_P A ARG 56 A ARG 72 1 AA4 8 A PRO 79 A PRO 95 HELX_P A GLU 81 A GLU 97 5 AA5 3 A ILE 89 A ILE 105 HELX_P A LEU 104 A LEU 120 1 AA6 16 A VAL 106 A VAL 122 HELX_P A ASN 112 A ASN 128 1 AA7 7 A ASN 123 A ASN 139 HELX_P A ALA 138 A ALA 154 1 AA8 16 A ASN 159 A ASN 175 HELX_P A LEU 175 A LEU 191 1 AA9 17 A PRO 186 A PRO 202 HELX_P A MET 189 A MET 205 5 AB1 4 A GLU 190 A GLU 206 HELX_P A GLN 203 A GLN 219 1 AB2 14 A GLU 215 A GLU 231 HELX_P A ALA 220 A ALA 236 1 AB3 6 A ASP 236 A ASP 252 HELX_P A ALA 248 A ALA 264 1 AB4 13 A VAL 258 A VAL 274 HELX_P A MET 272 A MET 288 1 AB5 15 A ASN 273 A ASN 289 HELX_P A LYS 277 A LYS 293 5 AB6 5 A PRO 288 A PRO 304 HELX_P A GLU 290 A GLU 306 5 AB7 3 A SER 291 A SER 307 HELX_P A GLY 307 A GLY 323 1 AB8 17 A GLU 308 A GLU 324 HELX_P A TYR 314 A TYR 330 5 AB9 7 A ASP 320 A ASP 336 HELX_P A GLY 343 A GLY 359 1 AC1 24 A ALA 355 A ALA 371 HELX_P A MET 360 A MET 376 5 AC2 6 A SER 365 A SER 381 HELX_P A ASN 371 A ASN 387 1 AC3 7 A PRO 379 A PRO 395 HELX_P A ALA 396 A ALA 412 1 AC4 18 A GLY 403 A GLY 419 HELX_P A GLU 408 A GLU 424 1 AC5 6 A ASP 418 A ASP 434 HELX_P A ALA 434 A ALA 450 1 AC6 17 HYDROLASE YgdH, PpnN, allosteric enzyme, nucleotide metabolism, stringent response, antibiotic tolerance, persistence, fluoroquinolone, hydrolase PPNN_ECOLI UNP 1 2 P0ADR8 ITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFENFDINVLRRERGVKLELINPPE EAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINE NEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKR LEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDD AAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVK EVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT 2 454 6GFM 1 453 P0ADR8 A 1 17 469 1 expression tag ARG -16 6GFM A P0ADR8 UNP 1 1 expression tag GLY -15 6GFM A P0ADR8 UNP 2 1 expression tag SER -14 6GFM A P0ADR8 UNP 3 1 expression tag HIS -13 6GFM A P0ADR8 UNP 4 1 expression tag HIS -12 6GFM A P0ADR8 UNP 5 1 expression tag HIS -11 6GFM A P0ADR8 UNP 6 1 expression tag HIS -10 6GFM A P0ADR8 UNP 7 1 expression tag HIS -9 6GFM A P0ADR8 UNP 8 1 expression tag HIS -8 6GFM A P0ADR8 UNP 9 1 expression tag THR -7 6GFM A P0ADR8 UNP 10 1 expression tag ASP -6 6GFM A P0ADR8 UNP 11 1 expression tag PRO -5 6GFM A P0ADR8 UNP 12 1 expression tag ALA -4 6GFM A P0ADR8 UNP 13 1 expression tag LEU -3 6GFM A P0ADR8 UNP 14 1 expression tag ARG -2 6GFM A P0ADR8 UNP 15 1 expression tag ALA -1 6GFM A P0ADR8 UNP 16 1 expression tag GLY 454 6GFM A P0ADR8 UNP 470 1 expression tag LEU 455 6GFM A P0ADR8 UNP 471 1 expression tag CYS 456 6GFM A P0ADR8 UNP 472 1 expression tag GLY 457 6GFM A P0ADR8 UNP 473 1 expression tag ARG 458 6GFM A P0ADR8 UNP 474 3 2 7 anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel parallel A ILE 1 A ILE 17 A ILE 4 A ILE 20 A VAL 71 A VAL 87 A ILE 76 A ILE 92 A ASP 61 A ASP 77 A ARG 66 A ARG 82 A PHE 83 A PHE 99 A VAL 84 A VAL 100 A ARG 87 A ARG 103 A ILE 88 A ILE 104 A GLU 230 A GLU 246 A ILE 233 A ILE 249 A PHE 210 A PHE 226 A THR 214 A THR 230 A ASN 179 A ASN 195 A THR 182 A THR 198 A MET 149 A MET 165 A TRP 153 A TRP 169 A GLY 250 A GLY 266 A ILE 253 A ILE 269 A LEU 283 A LEU 299 A GLY 287 A GLY 303 A ARG 315 A ARG 331 A ILE 318 A ILE 334 binding site for residue 0O2 A 501 A 0O2 501 Software 17 A ARG 67 A ARG 83 17 15_554 A ARG 69 A ARG 85 17 15_554 A LYS 72 A LYS 88 17 15_554 A GLY 144 A GLY 160 17 1_555 A ARG 339 A ARG 355 17 1_555 A ARG 340 A ARG 356 17 1_555 A GLY 343 A GLY 359 17 1_555 A ASP 344 A ASP 360 17 1_555 A ALA 345 A ALA 361 17 1_555 A TYR 346 A TYR 362 17 1_555 A HOH 601 C HOH 17 1_555 A HOH 609 C HOH 17 1_555 A HOH 616 C HOH 17 1_555 A HOH 628 C HOH 17 1_555 A HOH 636 C HOH 17 1_555 A HOH 639 C HOH 17 1_555 A HOH 654 C HOH 17 1_555 98 I 41 2 2 I 4bw 2bw