0.014276
0.000000
0.000000
0.000000
0.014011
0.000000
0.000000
0.000000
0.010994
0.00000
0.00000
0.00000
Landel, I.
Weisner, J.
Mueller, M.P.
Scheinpflug, R.
Rauh, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
70.050
71.370
90.960
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C37 H36 N6 O3
612.720
~{N}-[1-methyl-2-oxidanylidene-3-[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]benzimidazol-5-yl]propanamide
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
Y
88
N
C
Y
89
N
C
Y
90
N
C
Y
91
N
C
Y
92
N
C
Y
93
N
C
Y
94
N
C
Y
95
N
C
Y
96
N
C
N
97
N
C
N
98
N
O
N
99
N
N
N
100
N
C
N
101
N
C
Y
102
N
C
Y
103
N
N
Y
104
N
C
Y
105
N
C
Y
106
N
C
Y
107
N
C
Y
108
N
C
Y
109
N
C
Y
110
N
C
N
111
N
C
N
112
N
N
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
N
Y
119
N
C
Y
120
N
C
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
Y
125
N
C
Y
126
N
C
Y
127
N
C
Y
128
N
C
N
129
N
N
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
C
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
N
C
N
195
N
C
N
196
N
C
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
Y
224
N
C
Y
225
N
N
Y
226
N
C
Y
227
N
C
Y
228
N
N
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
S
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
O
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
N
N
266
S
C
N
267
N
C
N
268
N
O
N
269
N
C
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
N
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
C
N
318
N
S
N
319
N
C
N
320
N
O
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
O
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
R
C
N
391
N
O
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
N
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
N
441
N
O
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
Y
84
N
doub
Y
85
N
sing
Y
86
N
sing
N
87
N
sing
N
88
N
sing
Y
89
N
doub
N
90
N
sing
N
91
N
sing
Y
92
N
doub
N
93
N
sing
N
94
N
doub
Y
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
Y
109
N
doub
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
Y
113
N
doub
Y
114
N
sing
N
115
N
sing
Y
116
N
doub
Y
117
N
sing
Y
118
N
sing
Y
119
N
doub
Y
120
N
sing
Y
121
N
sing
N
122
N
sing
Y
123
N
doub
Y
124
N
doub
Y
125
N
doub
N
126
N
sing
Y
127
N
doub
N
128
N
doub
Y
129
N
sing
N
130
N
sing
Y
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
Y
228
N
sing
Y
229
N
doub
Y
230
N
doub
N
231
N
sing
Y
232
N
sing
N
233
N
sing
Y
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
doub
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
doub
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
Y
405
N
doub
Y
406
N
sing
Y
407
N
sing
N
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
sing
N
412
N
sing
Y
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
Y
433
N
doub
Y
434
N
sing
Y
435
N
sing
N
436
N
sing
Y
437
N
doub
N
438
N
sing
Y
439
N
doub
N
440
N
sing
Y
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
UK
Chem Sci
2041-6520
10
3573
3585
10.1039/c8sc05212c
30996949
Structural and chemical insights into the covalent-allosteric inhibition of the protein kinase Akt.
2019
0000-0002-4489-9535
0000-0002-6103-7371
0000-0003-4433-0872
0000-0002-0062-1849
0000-0002-7390-8795
0000-0002-1529-8933
0000-0003-3057-389X
0000-0002-1970-7642
10.2210/pdb6hhj/pdb
pdb_00006hhj
100
1
PIXEL
2018-02-24
DECTRIS PILATUS 6M
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.00000482378
1.0
X10SA
SLS
1.00000482378
SYNCHROTRON
SLS BEAMLINE X10SA
51746.035
RAC-alpha serine/threonine-protein kinase
2.7.11.1
1
man
polymer
612.720
~{N}-[1-methyl-2-oxidanylidene-3-[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]benzimidazol-5-yl]propanamide
1
syn
non-polymer
18.015
water
120
nat
water
Protein kinase B,PKB,Protein kinase B alpha,PKB alpha,Proto-oncogene c-Akt,RAC-PK-alpha
no
no
GSDVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW
TTVIERTFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGT
FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS
RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV
LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAK
EIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQM
GSDVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW
TTVIERTFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGT
FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS
RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV
LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAK
EIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQM
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
446
AKT1, PKB, RAC
9606
Homo sapiens
7108
Spodoptera frugiperda
Biological sequence
1
2.20
44.02
VAPOR DIFFUSION, HANGING DROP
7.5
1.25 mM Na-acetate, 3.75 mM Na-citrate, 15 % v/v PEG 2000 MME, pH 7.5, 3 mg/mL Akt1 (in 25 mM TRIS, 100 mM NaCl, 10 % Glycerol, 5 mM DTT, pH 7.5), 1ul reservoir + 1ul protein solution
293
citation
citation_author
pdbx_database_proc
pdbx_struct_ref_seq_depositor_info
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Database references
Refinement description
1
0
2019-02-20
1
1
2019-05-01
1
2
2024-01-17
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_pdbx_struct_ref_seq_depositor_info.db_seq_one_letter_code
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Germany
German Federal Ministry for Education and Research
BMBF 01GS08104
Germany
German Federal Ministry for Education and Research
01ZX1303C
N
PDBE
Y
PDBE
2018-08-28
REL
REL
G4H
~{N}-[1-methyl-2-oxidanylidene-3-[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]benzimidazol-5-yl]propanamide
HOH
water
6HHG
PDB
experimental model
DRG
1
2
G4H
G4H
501
A
HOH
108
3
HOH
HOH
601
A
HOH
73
3
HOH
HOH
602
A
HOH
28
3
HOH
HOH
603
A
HOH
49
3
HOH
HOH
604
A
HOH
146
3
HOH
HOH
605
A
HOH
94
3
HOH
HOH
606
A
HOH
56
3
HOH
HOH
607
A
HOH
89
3
HOH
HOH
608
A
HOH
90
3
HOH
HOH
609
A
HOH
42
3
HOH
HOH
610
A
HOH
150
3
HOH
HOH
611
A
HOH
23
3
HOH
HOH
612
A
HOH
6
3
HOH
HOH
613
A
HOH
86
3
HOH
HOH
614
A
HOH
48
3
HOH
HOH
615
A
HOH
125
3
HOH
HOH
616
A
HOH
69
3
HOH
HOH
617
A
HOH
22
3
HOH
HOH
618
A
HOH
59
3
HOH
HOH
619
A
HOH
55
3
HOH
HOH
620
A
HOH
77
3
HOH
HOH
621
A
HOH
24
3
HOH
HOH
622
A
HOH
116
3
HOH
HOH
623
A
HOH
58
3
HOH
HOH
624
A
HOH
26
3
HOH
HOH
625
A
HOH
11
3
HOH
HOH
626
A
HOH
70
3
HOH
HOH
627
A
HOH
100
3
HOH
HOH
628
A
HOH
37
3
HOH
HOH
629
A
HOH
31
3
HOH
HOH
630
A
HOH
21
3
HOH
HOH
631
A
HOH
12
3
HOH
HOH
632
A
HOH
75
3
HOH
HOH
633
A
HOH
44
3
HOH
HOH
634
A
HOH
101
3
HOH
HOH
635
A
HOH
79
3
HOH
HOH
636
A
HOH
40
3
HOH
HOH
637
A
HOH
47
3
HOH
HOH
638
A
HOH
45
3
HOH
HOH
639
A
HOH
82
3
HOH
HOH
640
A
HOH
78
3
HOH
HOH
641
A
HOH
124
3
HOH
HOH
642
A
HOH
62
3
HOH
HOH
643
A
HOH
104
3
HOH
HOH
644
A
HOH
60
3
HOH
HOH
645
A
HOH
2
3
HOH
HOH
646
A
HOH
76
3
HOH
HOH
647
A
HOH
53
3
HOH
HOH
648
A
HOH
54
3
HOH
HOH
649
A
HOH
17
3
HOH
HOH
650
A
HOH
8
3
HOH
HOH
651
A
HOH
92
3
HOH
HOH
652
A
HOH
74
3
HOH
HOH
653
A
HOH
27
3
HOH
HOH
654
A
HOH
9
3
HOH
HOH
655
A
HOH
33
3
HOH
HOH
656
A
HOH
43
3
HOH
HOH
657
A
HOH
52
3
HOH
HOH
658
A
HOH
144
3
HOH
HOH
659
A
HOH
66
3
HOH
HOH
660
A
HOH
35
3
HOH
HOH
661
A
HOH
106
3
HOH
HOH
662
A
HOH
140
3
HOH
HOH
663
A
HOH
80
3
HOH
HOH
664
A
HOH
99
3
HOH
HOH
665
A
HOH
122
3
HOH
HOH
666
A
HOH
67
3
HOH
HOH
667
A
HOH
29
3
HOH
HOH
668
A
HOH
136
3
HOH
HOH
669
A
HOH
132
3
HOH
HOH
670
A
HOH
5
3
HOH
HOH
671
A
HOH
93
3
HOH
HOH
672
A
HOH
131
3
HOH
HOH
673
A
HOH
1
3
HOH
HOH
674
A
HOH
39
3
HOH
HOH
675
A
HOH
118
3
HOH
HOH
676
A
HOH
7
3
HOH
HOH
677
A
HOH
63
3
HOH
HOH
678
A
HOH
98
3
HOH
HOH
679
A
HOH
121
3
HOH
HOH
680
A
HOH
36
3
HOH
HOH
681
A
HOH
149
3
HOH
HOH
682
A
HOH
111
3
HOH
HOH
683
A
HOH
46
3
HOH
HOH
684
A
HOH
142
3
HOH
HOH
685
A
HOH
65
3
HOH
HOH
686
A
HOH
3
3
HOH
HOH
687
A
HOH
4
3
HOH
HOH
688
A
HOH
148
3
HOH
HOH
689
A
HOH
97
3
HOH
HOH
690
A
HOH
141
3
HOH
HOH
691
A
HOH
88
3
HOH
HOH
692
A
HOH
38
3
HOH
HOH
693
A
HOH
16
3
HOH
HOH
694
A
HOH
120
3
HOH
HOH
695
A
HOH
126
3
HOH
HOH
696
A
HOH
96
3
HOH
HOH
697
A
HOH
84
3
HOH
HOH
698
A
HOH
64
3
HOH
HOH
699
A
HOH
127
3
HOH
HOH
700
A
HOH
71
3
HOH
HOH
701
A
HOH
145
3
HOH
HOH
702
A
HOH
119
3
HOH
HOH
703
A
HOH
113
3
HOH
HOH
704
A
HOH
25
3
HOH
HOH
705
A
HOH
83
3
HOH
HOH
706
A
HOH
61
3
HOH
HOH
707
A
HOH
110
3
HOH
HOH
708
A
HOH
81
3
HOH
HOH
709
A
HOH
151
3
HOH
HOH
710
A
HOH
105
3
HOH
HOH
711
A
HOH
115
3
HOH
HOH
712
A
HOH
130
3
HOH
HOH
713
A
HOH
112
3
HOH
HOH
714
A
HOH
85
3
HOH
HOH
715
A
HOH
13
3
HOH
HOH
716
A
HOH
102
3
HOH
HOH
717
A
HOH
107
3
HOH
HOH
718
A
HOH
41
3
HOH
HOH
719
A
HOH
137
3
HOH
HOH
720
A
n
1
1
A
n
2
2
A
ASP
3
n
3
ASP
3
A
VAL
4
n
4
VAL
4
A
ALA
5
n
5
ALA
5
A
ILE
6
n
6
ILE
6
A
VAL
7
n
7
VAL
7
A
LYS
8
n
8
LYS
8
A
GLU
9
n
9
GLU
9
A
GLY
10
n
10
GLY
10
A
TRP
11
n
11
TRP
11
A
LEU
12
n
12
LEU
12
A
HIS
13
n
13
HIS
13
A
LYS
14
n
14
LYS
14
A
ARG
15
n
15
ARG
15
A
GLY
16
n
16
GLY
16
A
GLU
17
n
17
GLU
17
A
TYR
18
n
18
TYR
18
A
ILE
19
n
19
ILE
19
A
LYS
20
n
20
LYS
20
A
THR
21
n
21
THR
21
A
TRP
22
n
22
TRP
22
A
ARG
23
n
23
ARG
23
A
PRO
24
n
24
PRO
24
A
ARG
25
n
25
ARG
25
A
TYR
26
n
26
TYR
26
A
PHE
27
n
27
PHE
27
A
LEU
28
n
28
LEU
28
A
LEU
29
n
29
LEU
29
A
LYS
30
n
30
LYS
30
A
ASN
31
n
31
ASN
31
A
ASP
32
n
32
ASP
32
A
GLY
33
n
33
GLY
33
A
THR
34
n
34
THR
34
A
PHE
35
n
35
PHE
35
A
ILE
36
n
36
ILE
36
A
GLY
37
n
37
GLY
37
A
TYR
38
n
38
TYR
38
A
LYS
39
n
39
LYS
39
A
GLU
40
n
40
GLU
40
A
ARG
41
n
41
ARG
41
A
PRO
42
n
42
PRO
42
A
GLN
43
n
43
GLN
43
A
ASP
44
n
44
ASP
44
A
n
45
45
A
n
46
46
A
GLN
47
n
47
GLN
47
A
ARG
48
n
48
ARG
48
A
GLU
49
n
49
GLU
49
A
ALA
50
n
50
ALA
50
A
PRO
51
n
51
PRO
51
A
LEU
52
n
52
LEU
52
A
ASN
53
n
53
ASN
53
A
ASN
54
n
54
ASN
54
A
PHE
55
n
55
PHE
55
A
SER
56
n
56
SER
56
A
VAL
57
n
57
VAL
57
A
ALA
58
n
58
ALA
58
A
GLN
59
n
59
GLN
59
A
CYS
60
n
60
CYS
60
A
GLN
61
n
61
GLN
61
A
LEU
62
n
62
LEU
62
A
MET
63
n
63
MET
63
A
LYS
64
n
64
LYS
64
A
THR
65
n
65
THR
65
A
GLU
66
n
66
GLU
66
A
ARG
67
n
67
ARG
67
A
PRO
68
n
68
PRO
68
A
ARG
69
n
69
ARG
69
A
PRO
70
n
70
PRO
70
A
ASN
71
n
71
ASN
71
A
THR
72
n
72
THR
72
A
PHE
73
n
73
PHE
73
A
ILE
74
n
74
ILE
74
A
ILE
75
n
75
ILE
75
A
ARG
76
n
76
ARG
76
A
CYS
77
n
77
CYS
77
A
LEU
78
n
78
LEU
78
A
GLN
79
n
79
GLN
79
A
TRP
80
n
80
TRP
80
A
THR
81
n
81
THR
81
A
THR
82
n
82
THR
82
A
VAL
83
n
83
VAL
83
A
ILE
84
n
84
ILE
84
A
GLU
85
n
85
GLU
85
A
ARG
86
n
86
ARG
86
A
THR
87
n
87
THR
87
A
PHE
88
n
88
PHE
88
A
HIS
89
n
89
HIS
89
A
VAL
90
n
90
VAL
90
A
GLU
91
n
91
GLU
91
A
THR
92
n
92
THR
92
A
PRO
93
n
93
PRO
93
A
GLU
94
n
94
GLU
94
A
GLU
95
n
95
GLU
95
A
ARG
96
n
96
ARG
96
A
GLU
97
n
97
GLU
97
A
GLU
98
n
98
GLU
98
A
TRP
99
n
99
TRP
99
A
THR
100
n
100
THR
100
A
THR
101
n
101
THR
101
A
ALA
102
n
102
ALA
102
A
ILE
103
n
103
ILE
103
A
GLN
104
n
104
GLN
104
A
THR
105
n
105
THR
105
A
VAL
106
n
106
VAL
106
A
ALA
107
n
107
ALA
107
A
ASP
108
n
108
ASP
108
A
GLY
109
n
109
GLY
109
A
LEU
110
n
110
LEU
110
A
LYS
111
n
111
LYS
111
A
LYS
112
n
112
LYS
112
A
GLN
113
n
113
GLN
113
A
n
114
114
A
n
115
115
A
n
116
116
A
n
117
117
A
n
118
118
A
n
119
119
A
n
120
120
A
n
121
121
A
n
122
122
A
n
123
123
A
n
124
124
A
n
125
125
A
n
126
126
A
n
127
127
A
n
128
128
A
n
129
129
A
n
130
130
A
n
131
131
A
n
132
132
A
n
133
133
A
n
134
134
A
n
135
135
A
n
136
136
A
n
137
137
A
n
138
138
A
n
139
139
A
n
140
140
A
n
141
141
A
n
142
142
A
n
143
143
A
ARG
144
n
144
ARG
144
A
VAL
145
n
145
VAL
145
A
THR
146
n
146
THR
146
A
MET
147
n
147
MET
147
A
ASN
148
n
148
ASN
148
A
GLU
149
n
149
GLU
149
A
PHE
150
n
150
PHE
150
A
GLU
151
n
151
GLU
151
A
TYR
152
n
152
TYR
152
A
LEU
153
n
153
LEU
153
A
LYS
154
n
154
LYS
154
A
LEU
155
n
155
LEU
155
A
LEU
156
n
156
LEU
156
A
GLY
157
n
157
GLY
157
A
LYS
158
n
158
LYS
158
A
GLY
159
n
159
GLY
159
A
THR
160
n
160
THR
160
A
PHE
161
n
161
PHE
161
A
GLY
162
n
162
GLY
162
A
LYS
163
n
163
LYS
163
A
VAL
164
n
164
VAL
164
A
ILE
165
n
165
ILE
165
A
LEU
166
n
166
LEU
166
A
VAL
167
n
167
VAL
167
A
LYS
168
n
168
LYS
168
A
GLU
169
n
169
GLU
169
A
LYS
170
n
170
LYS
170
A
ALA
171
n
171
ALA
171
A
THR
172
n
172
THR
172
A
GLY
173
n
173
GLY
173
A
ARG
174
n
174
ARG
174
A
TYR
175
n
175
TYR
175
A
TYR
176
n
176
TYR
176
A
ALA
177
n
177
ALA
177
A
MET
178
n
178
MET
178
A
LYS
179
n
179
LYS
179
A
ILE
180
n
180
ILE
180
A
LEU
181
n
181
LEU
181
A
LYS
182
n
182
LYS
182
A
LYS
183
n
183
LYS
183
A
GLU
184
n
184
GLU
184
A
VAL
185
n
185
VAL
185
A
ILE
186
n
186
ILE
186
A
VAL
187
n
187
VAL
187
A
ALA
188
n
188
ALA
188
A
LYS
189
n
189
LYS
189
A
ASP
190
n
190
ASP
190
A
GLU
191
n
191
GLU
191
A
VAL
192
n
192
VAL
192
A
ALA
193
n
193
ALA
193
A
HIS
194
n
194
HIS
194
A
THR
195
n
195
THR
195
A
LEU
196
n
196
LEU
196
A
THR
197
n
197
THR
197
A
GLU
198
n
198
GLU
198
A
ASN
199
n
199
ASN
199
A
ARG
200
n
200
ARG
200
A
VAL
201
n
201
VAL
201
A
LEU
202
n
202
LEU
202
A
GLN
203
n
203
GLN
203
A
ASN
204
n
204
ASN
204
A
SER
205
n
205
SER
205
A
ARG
206
n
206
ARG
206
A
HIS
207
n
207
HIS
207
A
PRO
208
n
208
PRO
208
A
PHE
209
n
209
PHE
209
A
LEU
210
n
210
LEU
210
A
THR
211
n
211
THR
211
A
ALA
212
n
212
ALA
212
A
LEU
213
n
213
LEU
213
A
LYS
214
n
214
LYS
214
A
TYR
215
n
215
TYR
215
A
SER
216
n
216
SER
216
A
PHE
217
n
217
PHE
217
A
GLN
218
n
218
GLN
218
A
THR
219
n
219
THR
219
A
HIS
220
n
220
HIS
220
A
ASP
221
n
221
ASP
221
A
ARG
222
n
222
ARG
222
A
LEU
223
n
223
LEU
223
A
CYS
224
n
224
CYS
224
A
PHE
225
n
225
PHE
225
A
VAL
226
n
226
VAL
226
A
MET
227
n
227
MET
227
A
GLU
228
n
228
GLU
228
A
TYR
229
n
229
TYR
229
A
ALA
230
n
230
ALA
230
A
ASN
231
n
231
ASN
231
A
GLY
232
n
232
GLY
232
A
GLY
233
n
233
GLY
233
A
GLU
234
n
234
GLU
234
A
LEU
235
n
235
LEU
235
A
PHE
236
n
236
PHE
236
A
PHE
237
n
237
PHE
237
A
HIS
238
n
238
HIS
238
A
LEU
239
n
239
LEU
239
A
SER
240
n
240
SER
240
A
ARG
241
n
241
ARG
241
A
GLU
242
n
242
GLU
242
A
ARG
243
n
243
ARG
243
A
VAL
244
n
244
VAL
244
A
PHE
245
n
245
PHE
245
A
SER
246
n
246
SER
246
A
GLU
247
n
247
GLU
247
A
ASP
248
n
248
ASP
248
A
ARG
249
n
249
ARG
249
A
ALA
250
n
250
ALA
250
A
ARG
251
n
251
ARG
251
A
PHE
252
n
252
PHE
252
A
TYR
253
n
253
TYR
253
A
GLY
254
n
254
GLY
254
A
ALA
255
n
255
ALA
255
A
GLU
256
n
256
GLU
256
A
ILE
257
n
257
ILE
257
A
VAL
258
n
258
VAL
258
A
SER
259
n
259
SER
259
A
ALA
260
n
260
ALA
260
A
LEU
261
n
261
LEU
261
A
ASP
262
n
262
ASP
262
A
TYR
263
n
263
TYR
263
A
LEU
264
n
264
LEU
264
A
HIS
265
n
265
HIS
265
A
SER
266
n
266
SER
266
A
GLU
267
n
267
GLU
267
A
LYS
268
n
268
LYS
268
A
ASN
269
n
269
ASN
269
A
VAL
270
n
270
VAL
270
A
VAL
271
n
271
VAL
271
A
TYR
272
n
272
TYR
272
A
ARG
273
n
273
ARG
273
A
ASP
274
n
274
ASP
274
A
LEU
275
n
275
LEU
275
A
LYS
276
n
276
LYS
276
A
LEU
277
n
277
LEU
277
A
GLU
278
n
278
GLU
278
A
ASN
279
n
279
ASN
279
A
LEU
280
n
280
LEU
280
A
MET
281
n
281
MET
281
A
LEU
282
n
282
LEU
282
A
ASP
283
n
283
ASP
283
A
LYS
284
n
284
LYS
284
A
ASP
285
n
285
ASP
285
A
GLY
286
n
286
GLY
286
A
HIS
287
n
287
HIS
287
A
ILE
288
n
288
ILE
288
A
LYS
289
n
289
LYS
289
A
ILE
290
n
290
ILE
290
A
THR
291
n
291
THR
291
A
ASP
292
n
292
ASP
292
A
PHE
293
n
293
PHE
293
A
GLY
294
n
294
GLY
294
A
LEU
295
n
295
LEU
295
A
CYS
296
n
296
CYS
296
A
LYS
297
n
297
LYS
297
A
GLU
298
n
298
GLU
298
A
GLY
299
n
299
GLY
299
A
ILE
300
n
300
ILE
300
A
LYS
301
n
301
LYS
301
A
ASP
302
n
302
ASP
302
A
GLY
303
n
303
GLY
303
A
ALA
304
n
304
ALA
304
A
THR
305
n
305
THR
305
A
MET
306
n
306
MET
306
A
LYS
307
n
307
LYS
307
A
THR
308
n
308
THR
308
A
PHE
309
n
309
PHE
309
A
CYS
310
n
310
CYS
310
A
GLY
311
n
311
GLY
311
A
THR
312
n
312
THR
312
A
PRO
313
n
313
PRO
313
A
GLU
314
n
314
GLU
314
A
TYR
315
n
315
TYR
315
A
LEU
316
n
316
LEU
316
A
ALA
317
n
317
ALA
317
A
PRO
318
n
318
PRO
318
A
GLU
319
n
319
GLU
319
A
VAL
320
n
320
VAL
320
A
LEU
321
n
321
LEU
321
A
GLU
322
n
322
GLU
322
A
ASP
323
n
323
ASP
323
A
ASN
324
n
324
ASN
324
A
ASP
325
n
325
ASP
325
A
TYR
326
n
326
TYR
326
A
GLY
327
n
327
GLY
327
A
ARG
328
n
328
ARG
328
A
ALA
329
n
329
ALA
329
A
VAL
330
n
330
VAL
330
A
ASP
331
n
331
ASP
331
A
TRP
332
n
332
TRP
332
A
TRP
333
n
333
TRP
333
A
GLY
334
n
334
GLY
334
A
LEU
335
n
335
LEU
335
A
GLY
336
n
336
GLY
336
A
VAL
337
n
337
VAL
337
A
VAL
338
n
338
VAL
338
A
MET
339
n
339
MET
339
A
TYR
340
n
340
TYR
340
A
GLU
341
n
341
GLU
341
A
MET
342
n
342
MET
342
A
MET
343
n
343
MET
343
A
CYS
344
n
344
CYS
344
A
GLY
345
n
345
GLY
345
A
ARG
346
n
346
ARG
346
A
LEU
347
n
347
LEU
347
A
PRO
348
n
348
PRO
348
A
PHE
349
n
349
PHE
349
A
TYR
350
n
350
TYR
350
A
ASN
351
n
351
ASN
351
A
GLN
352
n
352
GLN
352
A
ASP
353
n
353
ASP
353
A
HIS
354
n
354
HIS
354
A
GLU
355
n
355
GLU
355
A
LYS
356
n
356
LYS
356
A
LEU
357
n
357
LEU
357
A
PHE
358
n
358
PHE
358
A
GLU
359
n
359
GLU
359
A
LEU
360
n
360
LEU
360
A
ILE
361
n
361
ILE
361
A
LEU
362
n
362
LEU
362
A
MET
363
n
363
MET
363
A
GLU
364
n
364
GLU
364
A
GLU
365
n
365
GLU
365
A
ILE
366
n
366
ILE
366
A
ARG
367
n
367
ARG
367
A
PHE
368
n
368
PHE
368
A
PRO
369
n
369
PRO
369
A
ARG
370
n
370
ARG
370
A
THR
371
n
371
THR
371
A
LEU
372
n
372
LEU
372
A
GLY
373
n
373
GLY
373
A
PRO
374
n
374
PRO
374
A
GLU
375
n
375
GLU
375
A
ALA
376
n
376
ALA
376
A
LYS
377
n
377
LYS
377
A
SER
378
n
378
SER
378
A
LEU
379
n
379
LEU
379
A
LEU
380
n
380
LEU
380
A
SER
381
n
381
SER
381
A
GLY
382
n
382
GLY
382
A
LEU
383
n
383
LEU
383
A
LEU
384
n
384
LEU
384
A
LYS
385
n
385
LYS
385
A
LYS
386
n
386
LYS
386
A
ASP
387
n
387
ASP
387
A
PRO
388
n
388
PRO
388
A
LYS
389
n
389
LYS
389
A
GLN
390
n
390
GLN
390
A
ARG
391
n
391
ARG
391
A
LEU
392
n
392
LEU
392
A
GLY
393
n
393
GLY
393
A
GLY
394
n
394
GLY
394
A
GLY
395
n
395
GLY
395
A
SER
396
n
396
SER
396
A
GLU
397
n
397
GLU
397
A
ASP
398
n
398
ASP
398
A
ALA
399
n
399
ALA
399
A
LYS
400
n
400
LYS
400
A
GLU
401
n
401
GLU
401
A
ILE
402
n
402
ILE
402
A
MET
403
n
403
MET
403
A
GLN
404
n
404
GLN
404
A
HIS
405
n
405
HIS
405
A
ARG
406
n
406
ARG
406
A
PHE
407
n
407
PHE
407
A
PHE
408
n
408
PHE
408
A
ALA
409
n
409
ALA
409
A
GLY
410
n
410
GLY
410
A
ILE
411
n
411
ILE
411
A
VAL
412
n
412
VAL
412
A
TRP
413
n
413
TRP
413
A
GLN
414
n
414
GLN
414
A
HIS
415
n
415
HIS
415
A
VAL
416
n
416
VAL
416
A
TYR
417
n
417
TYR
417
A
GLU
418
n
418
GLU
418
A
LYS
419
n
419
LYS
419
A
LYS
420
n
420
LYS
420
A
LEU
421
n
421
LEU
421
A
SER
422
n
422
SER
422
A
PRO
423
n
423
PRO
423
A
PRO
424
n
424
PRO
424
A
PHE
425
n
425
PHE
425
A
LYS
426
n
426
LYS
426
A
PRO
427
n
427
PRO
427
A
GLN
428
n
428
GLN
428
A
VAL
429
n
429
VAL
429
A
THR
430
n
430
THR
430
A
SER
431
n
431
SER
431
A
GLU
432
n
432
GLU
432
A
THR
433
n
433
THR
433
A
ASP
434
n
434
ASP
434
A
THR
435
n
435
THR
435
A
ARG
436
n
436
ARG
436
A
TYR
437
n
437
TYR
437
A
PHE
438
n
438
PHE
438
A
ASP
439
n
439
ASP
439
A
GLU
440
n
440
GLU
440
A
GLU
441
n
441
GLU
441
A
PHE
442
n
442
PHE
442
A
THR
443
n
443
THR
443
A
ALA
444
n
444
ALA
444
A
n
445
445
A
n
446
446
A
1.2734
0.6607
0.1004
1.6980
0.0010
1.2307
-0.0368
0.0133
-0.0670
-0.0313
-0.0297
-0.0037
-0.0302
-0.0142
0.0651
0.2412
-0.0057
-0.0171
0.3315
0.0084
0.2931
refined
13.5227
-12.4667
-15.2227
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(chain A)
author_and_software_defined_assembly
PISA
1
monomeric
gel filtration
0
0
20330
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
38
A
O
TYR
38
A
N
TYR
26
A
N
TYR
26
A
O
LEU
29
A
O
LEU
29
A
N
VAL
7
A
N
VAL
7
A
N
ARG
15
A
N
ARG
15
A
O
THR
87
A
O
THR
87
A
O
ILE
84
A
O
ILE
84
A
N
CYS
77
A
N
CYS
77
A
O
THR
72
A
O
THR
72
A
N
THR
65
A
N
THR
65
A
N
LYS
154
A
N
LYS
154
A
O
LEU
166
A
O
LEU
166
A
N
VAL
167
A
N
VAL
167
A
O
TYR
176
A
O
TYR
176
A
N
LEU
181
A
N
LEU
181
A
O
LEU
223
A
O
LEU
223
A
O
VAL
226
A
O
VAL
226
A
N
TYR
215
A
N
TYR
215
A
N
MET
281
A
N
MET
281
A
O
LYS
289
A
O
LYS
289
A
N
ILE
300
A
N
ILE
300
A
O
PHE
309
A
O
PHE
309
1
A
GLY
1
A
GLY
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
VAL
45
A
VAL
45
1
Y
1
A
ASP
46
A
ASP
46
1
Y
1
A
ALA
114
A
ALA
114
1
Y
1
A
ALA
115
A
ALA
115
1
Y
1
A
ALA
116
A
ALA
116
1
Y
1
A
GLU
117
A
GLU
117
1
Y
1
A
MET
118
A
MET
118
1
Y
1
A
ASP
119
A
ASP
119
1
Y
1
A
PHE
120
A
PHE
120
1
Y
1
A
ARG
121
A
ARG
121
1
Y
1
A
SER
122
A
SER
122
1
Y
1
A
GLY
123
A
GLY
123
1
Y
1
A
SER
124
A
SER
124
1
Y
1
A
PRO
125
A
PRO
125
1
Y
1
A
SER
126
A
SER
126
1
Y
1
A
ASP
127
A
ASP
127
1
Y
1
A
ASN
128
A
ASN
128
1
Y
1
A
SER
129
A
SER
129
1
Y
1
A
GLY
130
A
GLY
130
1
Y
1
A
ALA
131
A
ALA
131
1
Y
1
A
GLU
132
A
GLU
132
1
Y
1
A
GLU
133
A
GLU
133
1
Y
1
A
MET
134
A
MET
134
1
Y
1
A
GLU
135
A
GLU
135
1
Y
1
A
VAL
136
A
VAL
136
1
Y
1
A
SER
137
A
SER
137
1
Y
1
A
LEU
138
A
LEU
138
1
Y
1
A
ALA
139
A
ALA
139
1
Y
1
A
LYS
140
A
LYS
140
1
Y
1
A
PRO
141
A
PRO
141
1
Y
1
A
LYS
142
A
LYS
142
1
Y
1
A
HIS
143
A
HIS
143
1
Y
1
A
GLN
445
A
GLN
445
1
Y
1
A
MET
446
A
MET
446
1
Y
1
A
TRP
80
56.42
-102.80
1
A
LEU
153
-121.31
-51.32
1
A
ARG
206
-100.42
76.00
1
A
THR
219
-104.13
-157.39
1
A
ARG
243
60.16
-59.12
1
A
ARG
273
62.30
-0.73
1
A
ASP
398
55.30
-117.94
1
A
GLU
440
-66.89
13.86
0.2435
0.2220
0.2230
2.300
43.812
1043
20854
5.00
99.92
0.32
1
FREE R-VALUE
1.37
MOLECULAR REPLACEMENT
27.01
0.90
1.11
6HHG
2.300
43.812
120
3544
46
0
3378
0.002
3511
0.592
4735
12.105
1340
0.024
494
0.002
601
0.3117
0.3057
2.4213
146
2779
100.00
0.3547
0.2963
2.5730
146
2780
100.00
0.3231
0.2911
2.7716
147
2796
100.00
0.3283
0.2699
3.0505
148
2807
100.00
0.2657
0.2451
3.4917
148
2816
100.00
0.1889
0.1787
4.3986
151
2854
100.00
0.1948
0.1786
43.8197
157
2979
100.00
2.3
43.812
6HHJ
20861
0.994
0.185
0.201
1
7.81
7.2
99.9
1.075
2.3
2.4
1.37
2443
0.708
1.103
1
7.1
100
refinement
PHENIX
1.9_1692
data reduction
XDS
data scaling
XSCALE
phasing
PHASER
N
Crystal Structure of AKT1 in Complex with Covalent-Allosteric AKT Inhibitor 24b
1
N
N
2
N
N
3
N
N
A
LEU
52
A
LEU
52
HELX_P
A
SER
56
A
SER
56
5
AA1
5
A
THR
92
A
THR
92
HELX_P
A
LYS
112
A
LYS
112
1
AA2
21
A
THR
146
A
THR
146
HELX_P
A
ASN
148
A
ASN
148
5
AA3
3
A
GLU
184
A
GLU
184
HELX_P
A
ILE
186
A
ILE
186
5
AA4
3
A
LYS
189
A
LYS
189
HELX_P
A
GLN
203
A
GLN
203
1
AA5
15
A
GLU
234
A
GLU
234
HELX_P
A
GLU
242
A
GLU
242
1
AA6
9
A
SER
246
A
SER
246
HELX_P
A
GLU
267
A
GLU
267
1
AA7
22
A
LYS
276
A
LYS
276
HELX_P
A
GLU
278
A
GLU
278
5
AA8
3
A
ALA
317
A
ALA
317
HELX_P
A
GLU
322
A
GLU
322
1
AA9
6
A
ARG
328
A
ARG
328
HELX_P
A
GLY
345
A
GLY
345
1
AB1
18
A
ASP
353
A
ASP
353
HELX_P
A
MET
363
A
MET
363
1
AB2
11
A
GLY
373
A
GLY
373
HELX_P
A
LEU
384
A
LEU
384
1
AB3
12
A
ALA
399
A
ALA
399
HELX_P
A
GLN
404
A
GLN
404
1
AB4
6
A
HIS
405
A
HIS
405
HELX_P
A
ALA
409
A
ALA
409
5
AB5
5
A
VAL
412
A
VAL
412
HELX_P
A
GLU
418
A
GLU
418
1
AB6
7
A
THR
435
A
THR
435
HELX_P
A
ALA
444
A
ALA
444
5
AB7
10
disulf
2.058
A
CYS
60
A
SG
CYS
60
1_555
A
CYS
77
A
SG
CYS
77
1_555
covale
1.821
none
A
CYS
310
A
SG
CYS
310
1_555
A
G4H
501
B
CAM
G4H
1_555
TRANSFERASE
Akt1, covalent-allosteric, TRANSFERASE
A
ARG
67
A
ARG
67
1
A
PRO
68
A
PRO
68
1.91
AKT1_HUMAN
UNP
1
2
P31749
SDVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWT
TVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTF
GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR
ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL
EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE
IMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQM
2
446
6HHJ
2
446
P31749
A
1
2
446
1
expression tag
GLY
1
6HHJ
A
P31749
UNP
1
1
GLU
engineered mutation
ALA
114
6HHJ
A
P31749
UNP
114
114
1
GLU
engineered mutation
ALA
115
6HHJ
A
P31749
UNP
115
115
1
GLU
engineered mutation
ALA
116
6HHJ
A
P31749
UNP
116
116
6
5
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
35
A
PHE
35
A
TYR
38
A
TYR
38
A
TRP
22
A
TRP
22
A
LYS
30
A
LYS
30
A
ILE
6
A
ILE
6
A
ARG
15
A
ARG
15
A
THR
82
A
THR
82
A
HIS
89
A
HIS
89
A
THR
72
A
THR
72
A
GLN
79
A
GLN
79
A
CYS
60
A
CYS
60
A
THR
65
A
THR
65
A
PHE
150
A
PHE
150
A
GLY
159
A
GLY
159
A
GLY
162
A
GLY
162
A
GLU
169
A
GLU
169
A
TYR
175
A
TYR
175
A
LYS
182
A
LYS
182
A
ARG
222
A
ARG
222
A
GLU
228
A
GLU
228
A
LEU
213
A
LEU
213
A
GLN
218
A
GLN
218
A
LEU
280
A
LEU
280
A
LEU
282
A
LEU
282
A
ILE
288
A
ILE
288
A
ILE
290
A
ILE
290
A
ILE
300
A
ILE
300
A
LYS
301
A
LYS
301
A
THR
308
A
THR
308
A
PHE
309
A
PHE
309
binding site for residue G4H A 501
A
G4H
501
Software
20
A
GLU
17
A
GLU
17
20
1_555
A
TYR
18
A
TYR
18
20
1_555
A
TRP
80
A
TRP
80
20
1_555
A
ILE
84
A
ILE
84
20
1_555
A
SER
205
A
SER
205
20
1_555
A
THR
211
A
THR
211
20
1_555
A
LYS
268
A
LYS
268
20
1_555
A
TYR
272
A
TYR
272
20
1_555
A
ARG
273
A
ARG
273
20
1_555
A
ASP
274
A
ASP
274
20
1_555
A
ILE
290
A
ILE
290
20
1_555
A
ASP
292
A
ASP
292
20
1_555
A
LEU
295
A
LEU
295
20
1_555
A
CYS
296
A
CYS
296
20
1_555
A
LYS
297
A
LYS
297
20
1_555
A
CYS
310
A
CYS
310
20
1_555
A
HOH
613
C
HOH
20
1_555
A
HOH
646
C
HOH
20
1_555
A
HOH
671
C
HOH
20
1_555
A
HOH
673
C
HOH
20
1_555
19
P 21 21 21