0.024323
0.000000
0.004357
-0.000000
0.011780
0.000000
0.000000
-0.000000
0.025171
0.000000
0.000000
0.000000
0000-0001-7815-485X
Somers, D.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
100.160
90.000
41.114
84.892
40.361
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Br -1
79.904
BROMIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O S
78.133
DIMETHYL SULFOXIDE
non-polymer
C24 H26 N2 O2
374.475
7-[2-methoxy-6-[(4-methylpyridin-2-yl)methoxy]phenyl]-2,3,4,5-tetrahydro-1~{H}-3-benzazepine
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C9 H12 N O6 P
261.168
n
O-PHOSPHOTYROSINE
PHOSPHONOTYROSINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
BR
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
S
N
90
N
O
N
91
N
C
N
92
N
C
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
Y
99
N
C
Y
100
N
C
Y
101
N
C
Y
102
N
C
Y
103
N
C
N
104
N
C
Y
105
N
C
Y
106
N
C
Y
107
N
C
Y
108
N
C
N
109
N
C
N
110
N
C
Y
111
N
C
N
112
N
C
N
113
N
O
Y
114
N
C
N
115
N
O
N
116
N
C
Y
117
N
C
Y
118
N
C
Y
119
N
C
Y
120
N
N
Y
121
N
C
Y
122
N
C
N
123
N
C
N
124
N
N
N
125
N
C
Y
126
N
C
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
N
N
154
S
C
N
155
N
C
N
156
N
O
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
N
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
N
N
174
S
C
N
175
N
C
N
176
N
O
N
177
N
C
N
178
N
C
N
179
N
C
N
180
N
O
N
181
N
O
N
182
N
O
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
N
C
N
194
N
C
N
195
N
O
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
C
N
203
N
O
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
Y
221
N
C
Y
222
N
N
Y
223
N
C
Y
224
N
C
Y
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
S
C
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
N
N
263
S
C
N
264
N
C
N
265
N
O
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
N
289
N
C
N
290
N
C
N
291
N
C
N
292
N
N
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
C
N
315
N
S
N
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
C
N
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
N
381
N
O
N
382
N
P
N
383
N
O
N
384
N
O
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
R
C
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
N
Y
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
N
443
N
O
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
N
N
457
S
C
N
458
N
C
N
459
N
O
N
460
N
C
Y
461
N
C
Y
462
N
C
Y
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
N
467
N
O
N
468
N
O
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
N
N
481
S
C
N
482
N
C
N
483
N
O
N
484
N
C
N
485
N
C
N
486
N
C
N
487
N
O
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
Y
92
N
doub
Y
93
N
sing
N
94
N
sing
Y
95
N
sing
Y
96
N
doub
Y
97
N
doub
Y
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
Y
108
N
doub
Y
109
N
sing
Y
110
N
sing
Y
111
N
doub
Y
112
N
doub
Y
113
N
sing
Y
114
N
doub
Y
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
Y
119
N
doub
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
Y
219
N
sing
Y
220
N
doub
Y
221
N
doub
N
222
N
sing
Y
223
N
sing
N
224
N
sing
Y
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
Y
327
N
doub
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
Y
331
N
doub
N
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
doub
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
Y
425
N
doub
Y
426
N
sing
Y
427
N
sing
N
428
N
sing
Y
429
N
doub
Y
430
N
sing
Y
431
N
sing
N
432
N
sing
Y
433
N
sing
Y
434
N
doub
N
435
N
sing
Y
436
N
doub
N
437
N
sing
Y
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
doub
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
Y
453
N
doub
Y
454
N
sing
Y
455
N
sing
N
456
N
sing
Y
457
N
doub
N
458
N
sing
Y
459
N
doub
N
460
N
sing
Y
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
doub
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
UK
Bioorg. Med. Chem. Lett.
BMCLE8
1127
1464-3405
28
3458
3462
10.1016/j.bmcl.2018.09.022
30249354
Discovery of potent and selective Spleen Tyrosine Kinase inhibitors for the topical treatment of inflammatory skin disease.
2018
10.2210/pdb6hm7/pdb
pdb_00006hm7
100
1
CCD
2011-08-10
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
I04
Diamond
0.9795
SYNCHROTRON
DIAMOND BEAMLINE I04
32104.941
Tyrosine-protein kinase SYK
2.7.10.2
1
man
polymer
374.475
7-[2-methoxy-6-[(4-methylpyridin-2-yl)methoxy]phenyl]-2,3,4,5-tetrahydro-1~{H}-3-benzazepine
1
syn
non-polymer
79.904
BROMIDE ION
3
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
78.133
DIMETHYL SULFOXIDE
1
syn
non-polymer
18.015
water
326
nat
water
Spleen tyrosine kinase,p72-Syk
no
yes
PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC
EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL
RADEN(PTR)YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA
GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN
PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC
EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL
RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR
EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
276
SYK
9606
Homo sapiens
SF9
7108
Spodoptera frugiperda
BACULOVIRUS
Biological sequence
1
2.16
43.04
VAPOR DIFFUSION, SITTING DROP
6.5
PEG 3350, bistrispropane, sodium bromide
293
citation
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Database references
Refinement description
1
0
2018-10-10
1
1
2018-10-17
1
2
2024-05-01
_citation.journal_volume
_citation.page_first
_citation.page_last
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
PDBE
Y
PDBE
2018-09-12
REL
REL
1
A
O
HOH
1126
6.19
GDH
7-[2-methoxy-6-[(4-methylpyridin-2-yl)methoxy]phenyl]-2,3,4,5-tetrahydro-1~{H}-3-benzazepine
BR
BROMIDE ION
GOL
GLYCEROL
DMS
DIMETHYL SULFOXIDE
HOH
water
OTHER IN-HOUSE COORDINATES
other
LIG
1
2
GDH
GDH
701
A
BR
1
3
BR
BR
702
A
BR
2
3
BR
BR
703
A
BR
3
3
BR
BR
704
A
GOL
1
4
GOL
GOL
705
A
DMS
1
5
DMS
DMS
706
A
HOH
46
6
HOH
HOH
801
A
HOH
126
6
HOH
HOH
802
A
HOH
194
6
HOH
HOH
803
A
HOH
161
6
HOH
HOH
804
A
HOH
94
6
HOH
HOH
805
A
HOH
185
6
HOH
HOH
806
A
HOH
40
6
HOH
HOH
807
A
HOH
54
6
HOH
HOH
808
A
HOH
107
6
HOH
HOH
809
A
HOH
64
6
HOH
HOH
810
A
HOH
313
6
HOH
HOH
811
A
HOH
247
6
HOH
HOH
812
A
HOH
276
6
HOH
HOH
813
A
HOH
61
6
HOH
HOH
814
A
HOH
267
6
HOH
HOH
815
A
HOH
22
6
HOH
HOH
816
A
HOH
69
6
HOH
HOH
817
A
HOH
96
6
HOH
HOH
818
A
HOH
209
6
HOH
HOH
819
A
HOH
6
6
HOH
HOH
820
A
HOH
131
6
HOH
HOH
821
A
HOH
149
6
HOH
HOH
822
A
HOH
171
6
HOH
HOH
823
A
HOH
102
6
HOH
HOH
824
A
HOH
33
6
HOH
HOH
825
A
HOH
62
6
HOH
HOH
826
A
HOH
127
6
HOH
HOH
827
A
HOH
45
6
HOH
HOH
828
A
HOH
93
6
HOH
HOH
829
A
HOH
325
6
HOH
HOH
830
A
HOH
195
6
HOH
HOH
831
A
HOH
326
6
HOH
HOH
832
A
HOH
306
6
HOH
HOH
833
A
HOH
77
6
HOH
HOH
834
A
HOH
286
6
HOH
HOH
835
A
HOH
190
6
HOH
HOH
836
A
HOH
110
6
HOH
HOH
837
A
HOH
55
6
HOH
HOH
838
A
HOH
271
6
HOH
HOH
839
A
HOH
233
6
HOH
HOH
840
A
HOH
301
6
HOH
HOH
841
A
HOH
92
6
HOH
HOH
842
A
HOH
218
6
HOH
HOH
843
A
HOH
50
6
HOH
HOH
844
A
HOH
114
6
HOH
HOH
845
A
HOH
177
6
HOH
HOH
846
A
HOH
97
6
HOH
HOH
847
A
HOH
95
6
HOH
HOH
848
A
HOH
311
6
HOH
HOH
849
A
HOH
7
6
HOH
HOH
850
A
HOH
226
6
HOH
HOH
851
A
HOH
72
6
HOH
HOH
852
A
HOH
148
6
HOH
HOH
853
A
HOH
83
6
HOH
HOH
854
A
HOH
23
6
HOH
HOH
855
A
HOH
272
6
HOH
HOH
856
A
HOH
67
6
HOH
HOH
857
A
HOH
65
6
HOH
HOH
858
A
HOH
119
6
HOH
HOH
859
A
HOH
181
6
HOH
HOH
860
A
HOH
86
6
HOH
HOH
861
A
HOH
219
6
HOH
HOH
862
A
HOH
21
6
HOH
HOH
863
A
HOH
16
6
HOH
HOH
864
A
HOH
66
6
HOH
HOH
865
A
HOH
302
6
HOH
HOH
866
A
HOH
234
6
HOH
HOH
867
A
HOH
25
6
HOH
HOH
868
A
HOH
71
6
HOH
HOH
869
A
HOH
153
6
HOH
HOH
870
A
HOH
213
6
HOH
HOH
871
A
HOH
10
6
HOH
HOH
872
A
HOH
141
6
HOH
HOH
873
A
HOH
285
6
HOH
HOH
874
A
HOH
300
6
HOH
HOH
875
A
HOH
98
6
HOH
HOH
876
A
HOH
176
6
HOH
HOH
877
A
HOH
32
6
HOH
HOH
878
A
HOH
243
6
HOH
HOH
879
A
HOH
13
6
HOH
HOH
880
A
HOH
34
6
HOH
HOH
881
A
HOH
188
6
HOH
HOH
882
A
HOH
319
6
HOH
HOH
883
A
HOH
230
6
HOH
HOH
884
A
HOH
297
6
HOH
HOH
885
A
HOH
4
6
HOH
HOH
886
A
HOH
145
6
HOH
HOH
887
A
HOH
2
6
HOH
HOH
888
A
HOH
189
6
HOH
HOH
889
A
HOH
15
6
HOH
HOH
890
A
HOH
162
6
HOH
HOH
891
A
HOH
30
6
HOH
HOH
892
A
HOH
28
6
HOH
HOH
893
A
HOH
103
6
HOH
HOH
894
A
HOH
273
6
HOH
HOH
895
A
HOH
268
6
HOH
HOH
896
A
HOH
208
6
HOH
HOH
897
A
HOH
53
6
HOH
HOH
898
A
HOH
20
6
HOH
HOH
899
A
HOH
17
6
HOH
HOH
900
A
HOH
104
6
HOH
HOH
901
A
HOH
236
6
HOH
HOH
902
A
HOH
147
6
HOH
HOH
903
A
HOH
290
6
HOH
HOH
904
A
HOH
139
6
HOH
HOH
905
A
HOH
14
6
HOH
HOH
906
A
HOH
140
6
HOH
HOH
907
A
HOH
245
6
HOH
HOH
908
A
HOH
9
6
HOH
HOH
909
A
HOH
287
6
HOH
HOH
910
A
HOH
124
6
HOH
HOH
911
A
HOH
38
6
HOH
HOH
912
A
HOH
57
6
HOH
HOH
913
A
HOH
191
6
HOH
HOH
914
A
HOH
70
6
HOH
HOH
915
A
HOH
204
6
HOH
HOH
916
A
HOH
112
6
HOH
HOH
917
A
HOH
254
6
HOH
HOH
918
A
HOH
307
6
HOH
HOH
919
A
HOH
113
6
HOH
HOH
920
A
HOH
216
6
HOH
HOH
921
A
HOH
51
6
HOH
HOH
922
A
HOH
146
6
HOH
HOH
923
A
HOH
244
6
HOH
HOH
924
A
HOH
279
6
HOH
HOH
925
A
HOH
136
6
HOH
HOH
926
A
HOH
11
6
HOH
HOH
927
A
HOH
47
6
HOH
HOH
928
A
HOH
250
6
HOH
HOH
929
A
HOH
170
6
HOH
HOH
930
A
HOH
5
6
HOH
HOH
931
A
HOH
58
6
HOH
HOH
932
A
HOH
251
6
HOH
HOH
933
A
HOH
315
6
HOH
HOH
934
A
HOH
175
6
HOH
HOH
935
A
HOH
39
6
HOH
HOH
936
A
HOH
269
6
HOH
HOH
937
A
HOH
8
6
HOH
HOH
938
A
HOH
206
6
HOH
HOH
939
A
HOH
122
6
HOH
HOH
940
A
HOH
201
6
HOH
HOH
941
A
HOH
76
6
HOH
HOH
942
A
HOH
80
6
HOH
HOH
943
A
HOH
37
6
HOH
HOH
944
A
HOH
27
6
HOH
HOH
945
A
HOH
12
6
HOH
HOH
946
A
HOH
85
6
HOH
HOH
947
A
HOH
202
6
HOH
HOH
948
A
HOH
151
6
HOH
HOH
949
A
HOH
111
6
HOH
HOH
950
A
HOH
89
6
HOH
HOH
951
A
HOH
3
6
HOH
HOH
952
A
HOH
109
6
HOH
HOH
953
A
HOH
81
6
HOH
HOH
954
A
HOH
193
6
HOH
HOH
955
A
HOH
105
6
HOH
HOH
956
A
HOH
215
6
HOH
HOH
957
A
HOH
232
6
HOH
HOH
958
A
HOH
79
6
HOH
HOH
959
A
HOH
310
6
HOH
HOH
960
A
HOH
19
6
HOH
HOH
961
A
HOH
305
6
HOH
HOH
962
A
HOH
178
6
HOH
HOH
963
A
HOH
35
6
HOH
HOH
964
A
HOH
200
6
HOH
HOH
965
A
HOH
31
6
HOH
HOH
966
A
HOH
207
6
HOH
HOH
967
A
HOH
49
6
HOH
HOH
968
A
HOH
99
6
HOH
HOH
969
A
HOH
52
6
HOH
HOH
970
A
HOH
41
6
HOH
HOH
971
A
HOH
274
6
HOH
HOH
972
A
HOH
257
6
HOH
HOH
973
A
HOH
172
6
HOH
HOH
974
A
HOH
44
6
HOH
HOH
975
A
HOH
314
6
HOH
HOH
976
A
HOH
106
6
HOH
HOH
977
A
HOH
59
6
HOH
HOH
978
A
HOH
68
6
HOH
HOH
979
A
HOH
42
6
HOH
HOH
980
A
HOH
121
6
HOH
HOH
981
A
HOH
323
6
HOH
HOH
982
A
HOH
74
6
HOH
HOH
983
A
HOH
26
6
HOH
HOH
984
A
HOH
43
6
HOH
HOH
985
A
HOH
24
6
HOH
HOH
986
A
HOH
128
6
HOH
HOH
987
A
HOH
252
6
HOH
HOH
988
A
HOH
82
6
HOH
HOH
989
A
HOH
197
6
HOH
HOH
990
A
HOH
321
6
HOH
HOH
991
A
HOH
87
6
HOH
HOH
992
A
HOH
1
6
HOH
HOH
993
A
HOH
36
6
HOH
HOH
994
A
HOH
184
6
HOH
HOH
995
A
HOH
212
6
HOH
HOH
996
A
HOH
246
6
HOH
HOH
997
A
HOH
156
6
HOH
HOH
998
A
HOH
223
6
HOH
HOH
999
A
HOH
317
6
HOH
HOH
1000
A
HOH
29
6
HOH
HOH
1001
A
HOH
129
6
HOH
HOH
1002
A
HOH
211
6
HOH
HOH
1003
A
HOH
88
6
HOH
HOH
1004
A
HOH
261
6
HOH
HOH
1005
A
HOH
196
6
HOH
HOH
1006
A
HOH
63
6
HOH
HOH
1007
A
HOH
225
6
HOH
HOH
1008
A
HOH
265
6
HOH
HOH
1009
A
HOH
100
6
HOH
HOH
1010
A
HOH
237
6
HOH
HOH
1011
A
HOH
123
6
HOH
HOH
1012
A
HOH
133
6
HOH
HOH
1013
A
HOH
158
6
HOH
HOH
1014
A
HOH
152
6
HOH
HOH
1015
A
HOH
221
6
HOH
HOH
1016
A
HOH
137
6
HOH
HOH
1017
A
HOH
101
6
HOH
HOH
1018
A
HOH
309
6
HOH
HOH
1019
A
HOH
18
6
HOH
HOH
1020
A
HOH
169
6
HOH
HOH
1021
A
HOH
182
6
HOH
HOH
1022
A
HOH
205
6
HOH
HOH
1023
A
HOH
118
6
HOH
HOH
1024
A
HOH
75
6
HOH
HOH
1025
A
HOH
179
6
HOH
HOH
1026
A
HOH
163
6
HOH
HOH
1027
A
HOH
116
6
HOH
HOH
1028
A
HOH
289
6
HOH
HOH
1029
A
HOH
48
6
HOH
HOH
1030
A
HOH
240
6
HOH
HOH
1031
A
HOH
132
6
HOH
HOH
1032
A
HOH
298
6
HOH
HOH
1033
A
HOH
165
6
HOH
HOH
1034
A
HOH
227
6
HOH
HOH
1035
A
HOH
291
6
HOH
HOH
1036
A
HOH
262
6
HOH
HOH
1037
A
HOH
241
6
HOH
HOH
1038
A
HOH
264
6
HOH
HOH
1039
A
HOH
91
6
HOH
HOH
1040
A
HOH
154
6
HOH
HOH
1041
A
HOH
108
6
HOH
HOH
1042
A
HOH
183
6
HOH
HOH
1043
A
HOH
248
6
HOH
HOH
1044
A
HOH
308
6
HOH
HOH
1045
A
HOH
150
6
HOH
HOH
1046
A
HOH
258
6
HOH
HOH
1047
A
HOH
157
6
HOH
HOH
1048
A
HOH
270
6
HOH
HOH
1049
A
HOH
263
6
HOH
HOH
1050
A
HOH
90
6
HOH
HOH
1051
A
HOH
231
6
HOH
HOH
1052
A
HOH
288
6
HOH
HOH
1053
A
HOH
159
6
HOH
HOH
1054
A
HOH
173
6
HOH
HOH
1055
A
HOH
187
6
HOH
HOH
1056
A
HOH
214
6
HOH
HOH
1057
A
HOH
78
6
HOH
HOH
1058
A
HOH
249
6
HOH
HOH
1059
A
HOH
222
6
HOH
HOH
1060
A
HOH
143
6
HOH
HOH
1061
A
HOH
316
6
HOH
HOH
1062
A
HOH
125
6
HOH
HOH
1063
A
HOH
275
6
HOH
HOH
1064
A
HOH
199
6
HOH
HOH
1065
A
HOH
235
6
HOH
HOH
1066
A
HOH
322
6
HOH
HOH
1067
A
HOH
174
6
HOH
HOH
1068
A
HOH
134
6
HOH
HOH
1069
A
HOH
294
6
HOH
HOH
1070
A
HOH
228
6
HOH
HOH
1071
A
HOH
293
6
HOH
HOH
1072
A
HOH
210
6
HOH
HOH
1073
A
HOH
280
6
HOH
HOH
1074
A
HOH
220
6
HOH
HOH
1075
A
HOH
56
6
HOH
HOH
1076
A
HOH
224
6
HOH
HOH
1077
A
HOH
320
6
HOH
HOH
1078
A
HOH
324
6
HOH
HOH
1079
A
HOH
160
6
HOH
HOH
1080
A
HOH
73
6
HOH
HOH
1081
A
HOH
130
6
HOH
HOH
1082
A
HOH
142
6
HOH
HOH
1083
A
HOH
299
6
HOH
HOH
1084
A
HOH
192
6
HOH
HOH
1085
A
HOH
186
6
HOH
HOH
1086
A
HOH
282
6
HOH
HOH
1087
A
HOH
167
6
HOH
HOH
1088
A
HOH
260
6
HOH
HOH
1089
A
HOH
84
6
HOH
HOH
1090
A
HOH
304
6
HOH
HOH
1091
A
HOH
198
6
HOH
HOH
1092
A
HOH
253
6
HOH
HOH
1093
A
HOH
120
6
HOH
HOH
1094
A
HOH
312
6
HOH
HOH
1095
A
HOH
180
6
HOH
HOH
1096
A
HOH
278
6
HOH
HOH
1097
A
HOH
318
6
HOH
HOH
1098
A
HOH
217
6
HOH
HOH
1099
A
HOH
115
6
HOH
HOH
1100
A
HOH
138
6
HOH
HOH
1101
A
HOH
255
6
HOH
HOH
1102
A
HOH
164
6
HOH
HOH
1103
A
HOH
283
6
HOH
HOH
1104
A
HOH
277
6
HOH
HOH
1105
A
HOH
284
6
HOH
HOH
1106
A
HOH
144
6
HOH
HOH
1107
A
HOH
292
6
HOH
HOH
1108
A
HOH
242
6
HOH
HOH
1109
A
HOH
229
6
HOH
HOH
1110
A
HOH
60
6
HOH
HOH
1111
A
HOH
238
6
HOH
HOH
1112
A
HOH
117
6
HOH
HOH
1113
A
HOH
166
6
HOH
HOH
1114
A
HOH
303
6
HOH
HOH
1115
A
HOH
203
6
HOH
HOH
1116
A
HOH
266
6
HOH
HOH
1117
A
HOH
155
6
HOH
HOH
1118
A
HOH
259
6
HOH
HOH
1119
A
HOH
239
6
HOH
HOH
1120
A
HOH
296
6
HOH
HOH
1121
A
HOH
135
6
HOH
HOH
1122
A
HOH
295
6
HOH
HOH
1123
A
HOH
168
6
HOH
HOH
1124
A
HOH
256
6
HOH
HOH
1125
A
HOH
281
6
HOH
HOH
1126
A
n
1
360
A
n
2
361
A
n
3
362
A
VAL
363
n
4
VAL
363
A
TYR
364
n
5
TYR
364
A
LEU
365
n
6
LEU
365
A
ASP
366
n
7
ASP
366
A
ARG
367
n
8
ARG
367
A
LYS
368
n
9
LYS
368
A
LEU
369
n
10
LEU
369
A
LEU
370
n
11
LEU
370
A
THR
371
n
12
THR
371
A
LEU
372
n
13
LEU
372
A
GLU
373
n
14
GLU
373
A
ASP
374
n
15
ASP
374
A
LYS
375
n
16
LYS
375
A
GLU
376
n
17
GLU
376
A
LEU
377
n
18
LEU
377
A
GLY
378
n
19
GLY
378
A
SER
379
n
20
SER
379
A
GLY
380
n
21
GLY
380
A
ASN
381
n
22
ASN
381
A
PHE
382
n
23
PHE
382
A
GLY
383
n
24
GLY
383
A
THR
384
n
25
THR
384
A
VAL
385
n
26
VAL
385
A
LYS
386
n
27
LYS
386
A
LYS
387
n
28
LYS
387
A
GLY
388
n
29
GLY
388
A
TYR
389
n
30
TYR
389
A
TYR
390
n
31
TYR
390
A
GLN
391
n
32
GLN
391
A
MET
392
n
33
MET
392
A
LYS
393
n
34
LYS
393
A
LYS
394
n
35
LYS
394
A
VAL
395
n
36
VAL
395
A
VAL
396
n
37
VAL
396
A
LYS
397
n
38
LYS
397
A
THR
398
n
39
THR
398
A
VAL
399
n
40
VAL
399
A
ALA
400
n
41
ALA
400
A
VAL
401
n
42
VAL
401
A
LYS
402
n
43
LYS
402
A
ILE
403
n
44
ILE
403
A
LEU
404
n
45
LEU
404
A
LYS
405
n
46
LYS
405
A
ASN
406
n
47
ASN
406
A
GLU
407
n
48
GLU
407
A
ALA
408
n
49
ALA
408
A
ASN
409
n
50
ASN
409
A
ASP
410
n
51
ASP
410
A
PRO
411
n
52
PRO
411
A
ALA
412
n
53
ALA
412
A
LEU
413
n
54
LEU
413
A
LYS
414
n
55
LYS
414
A
ASP
415
n
56
ASP
415
A
GLU
416
n
57
GLU
416
A
LEU
417
n
58
LEU
417
A
LEU
418
n
59
LEU
418
A
ALA
419
n
60
ALA
419
A
GLU
420
n
61
GLU
420
A
ALA
421
n
62
ALA
421
A
ASN
422
n
63
ASN
422
A
VAL
423
n
64
VAL
423
A
MET
424
n
65
MET
424
A
GLN
425
n
66
GLN
425
A
GLN
426
n
67
GLN
426
A
LEU
427
n
68
LEU
427
A
ASP
428
n
69
ASP
428
A
ASN
429
n
70
ASN
429
A
PRO
430
n
71
PRO
430
A
TYR
431
n
72
TYR
431
A
ILE
432
n
73
ILE
432
A
VAL
433
n
74
VAL
433
A
ARG
434
n
75
ARG
434
A
MET
435
n
76
MET
435
A
ILE
436
n
77
ILE
436
A
GLY
437
n
78
GLY
437
A
ILE
438
n
79
ILE
438
A
CYS
439
n
80
CYS
439
A
GLU
440
n
81
GLU
440
A
ALA
441
n
82
ALA
441
A
GLU
442
n
83
GLU
442
A
SER
443
n
84
SER
443
A
TRP
444
n
85
TRP
444
A
MET
445
n
86
MET
445
A
LEU
446
n
87
LEU
446
A
VAL
447
n
88
VAL
447
A
MET
448
n
89
MET
448
A
GLU
449
n
90
GLU
449
A
MET
450
n
91
MET
450
A
ALA
451
n
92
ALA
451
A
GLU
452
n
93
GLU
452
A
LEU
453
n
94
LEU
453
A
GLY
454
n
95
GLY
454
A
PRO
455
n
96
PRO
455
A
LEU
456
n
97
LEU
456
A
ASN
457
n
98
ASN
457
A
LYS
458
n
99
LYS
458
A
TYR
459
n
100
TYR
459
A
LEU
460
n
101
LEU
460
A
GLN
461
n
102
GLN
461
A
GLN
462
n
103
GLN
462
A
ASN
463
n
104
ASN
463
A
ARG
464
n
105
ARG
464
A
HIS
465
n
106
HIS
465
A
VAL
466
n
107
VAL
466
A
LYS
467
n
108
LYS
467
A
ASP
468
n
109
ASP
468
A
LYS
469
n
110
LYS
469
A
ASN
470
n
111
ASN
470
A
ILE
471
n
112
ILE
471
A
ILE
472
n
113
ILE
472
A
GLU
473
n
114
GLU
473
A
LEU
474
n
115
LEU
474
A
VAL
475
n
116
VAL
475
A
HIS
476
n
117
HIS
476
A
GLN
477
n
118
GLN
477
A
VAL
478
n
119
VAL
478
A
SER
479
n
120
SER
479
A
MET
480
n
121
MET
480
A
GLY
481
n
122
GLY
481
A
MET
482
n
123
MET
482
A
LYS
483
n
124
LYS
483
A
TYR
484
n
125
TYR
484
A
LEU
485
n
126
LEU
485
A
GLU
486
n
127
GLU
486
A
GLU
487
n
128
GLU
487
A
SER
488
n
129
SER
488
A
ASN
489
n
130
ASN
489
A
PHE
490
n
131
PHE
490
A
VAL
491
n
132
VAL
491
A
HIS
492
n
133
HIS
492
A
ARG
493
n
134
ARG
493
A
ASP
494
n
135
ASP
494
A
LEU
495
n
136
LEU
495
A
ALA
496
n
137
ALA
496
A
ALA
497
n
138
ALA
497
A
ARG
498
n
139
ARG
498
A
ASN
499
n
140
ASN
499
A
VAL
500
n
141
VAL
500
A
LEU
501
n
142
LEU
501
A
LEU
502
n
143
LEU
502
A
VAL
503
n
144
VAL
503
A
THR
504
n
145
THR
504
A
GLN
505
n
146
GLN
505
A
HIS
506
n
147
HIS
506
A
TYR
507
n
148
TYR
507
A
ALA
508
n
149
ALA
508
A
LYS
509
n
150
LYS
509
A
ILE
510
n
151
ILE
510
A
SER
511
n
152
SER
511
A
ASP
512
n
153
ASP
512
A
PHE
513
n
154
PHE
513
A
GLY
514
n
155
GLY
514
A
LEU
515
n
156
LEU
515
A
SER
516
n
157
SER
516
A
LYS
517
n
158
LYS
517
A
ALA
518
n
159
ALA
518
A
LEU
519
n
160
LEU
519
A
ARG
520
n
161
ARG
520
A
ALA
521
n
162
ALA
521
A
ASP
522
n
163
ASP
522
A
GLU
523
n
164
GLU
523
A
ASN
524
n
165
ASN
524
A
PTR
525
n
166
PTR
525
A
TYR
526
n
167
TYR
526
A
LYS
527
n
168
LYS
527
A
ALA
528
n
169
ALA
528
A
GLN
529
n
170
GLN
529
A
THR
530
n
171
THR
530
A
n
172
531
A
n
173
532
A
n
174
533
A
TRP
534
n
175
TRP
534
A
PRO
535
n
176
PRO
535
A
VAL
536
n
177
VAL
536
A
LYS
537
n
178
LYS
537
A
TRP
538
n
179
TRP
538
A
TYR
539
n
180
TYR
539
A
ALA
540
n
181
ALA
540
A
PRO
541
n
182
PRO
541
A
GLU
542
n
183
GLU
542
A
CYS
543
n
184
CYS
543
A
ILE
544
n
185
ILE
544
A
ASN
545
n
186
ASN
545
A
TYR
546
n
187
TYR
546
A
TYR
547
n
188
TYR
547
A
LYS
548
n
189
LYS
548
A
PHE
549
n
190
PHE
549
A
SER
550
n
191
SER
550
A
SER
551
n
192
SER
551
A
LYS
552
n
193
LYS
552
A
SER
553
n
194
SER
553
A
ASP
554
n
195
ASP
554
A
VAL
555
n
196
VAL
555
A
TRP
556
n
197
TRP
556
A
SER
557
n
198
SER
557
A
PHE
558
n
199
PHE
558
A
GLY
559
n
200
GLY
559
A
VAL
560
n
201
VAL
560
A
LEU
561
n
202
LEU
561
A
MET
562
n
203
MET
562
A
TRP
563
n
204
TRP
563
A
GLU
564
n
205
GLU
564
A
ALA
565
n
206
ALA
565
A
PHE
566
n
207
PHE
566
A
SER
567
n
208
SER
567
A
TYR
568
n
209
TYR
568
A
GLY
569
n
210
GLY
569
A
GLN
570
n
211
GLN
570
A
LYS
571
n
212
LYS
571
A
PRO
572
n
213
PRO
572
A
TYR
573
n
214
TYR
573
A
ARG
574
n
215
ARG
574
A
GLY
575
n
216
GLY
575
A
MET
576
n
217
MET
576
A
LYS
577
n
218
LYS
577
A
GLY
578
n
219
GLY
578
A
SER
579
n
220
SER
579
A
GLU
580
n
221
GLU
580
A
VAL
581
n
222
VAL
581
A
THR
582
n
223
THR
582
A
ALA
583
n
224
ALA
583
A
MET
584
n
225
MET
584
A
LEU
585
n
226
LEU
585
A
GLU
586
n
227
GLU
586
A
LYS
587
n
228
LYS
587
A
GLY
588
n
229
GLY
588
A
GLU
589
n
230
GLU
589
A
ARG
590
n
231
ARG
590
A
MET
591
n
232
MET
591
A
GLY
592
n
233
GLY
592
A
CYS
593
n
234
CYS
593
A
PRO
594
n
235
PRO
594
A
ALA
595
n
236
ALA
595
A
GLY
596
n
237
GLY
596
A
CYS
597
n
238
CYS
597
A
PRO
598
n
239
PRO
598
A
ARG
599
n
240
ARG
599
A
GLU
600
n
241
GLU
600
A
MET
601
n
242
MET
601
A
TYR
602
n
243
TYR
602
A
ASP
603
n
244
ASP
603
A
LEU
604
n
245
LEU
604
A
MET
605
n
246
MET
605
A
ASN
606
n
247
ASN
606
A
LEU
607
n
248
LEU
607
A
CYS
608
n
249
CYS
608
A
TRP
609
n
250
TRP
609
A
THR
610
n
251
THR
610
A
TYR
611
n
252
TYR
611
A
ASP
612
n
253
ASP
612
A
VAL
613
n
254
VAL
613
A
GLU
614
n
255
GLU
614
A
ASN
615
n
256
ASN
615
A
ARG
616
n
257
ARG
616
A
PRO
617
n
258
PRO
617
A
GLY
618
n
259
GLY
618
A
PHE
619
n
260
PHE
619
A
ALA
620
n
261
ALA
620
A
ALA
621
n
262
ALA
621
A
VAL
622
n
263
VAL
622
A
GLU
623
n
264
GLU
623
A
LEU
624
n
265
LEU
624
A
ARG
625
n
266
ARG
625
A
LEU
626
n
267
LEU
626
A
ARG
627
n
268
ARG
627
A
ASN
628
n
269
ASN
628
A
TYR
629
n
270
TYR
629
A
TYR
630
n
271
TYR
630
A
TYR
631
n
272
TYR
631
A
ASP
632
n
273
ASP
632
A
VAL
633
n
274
VAL
633
A
n
275
634
A
n
276
635
A
software_defined_assembly
PISA
1
monomeric
none
840
0
13390
A
PTR
525
modified residue
A
PTR
166
TYR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
371
A
N
THR
12
A
O
TYR
389
A
O
TYR
30
A
O
VAL
385
A
O
VAL
26
A
N
GLY
378
A
N
GLY
19
A
N
THR
371
A
N
THR
12
A
O
TYR
389
A
O
TYR
30
A
N
THR
384
A
N
THR
25
A
O
ILE
403
A
O
ILE
44
A
N
LEU
404
A
N
LEU
45
A
O
TRP
444
A
O
TRP
85
A
O
VAL
447
A
O
VAL
88
A
N
GLY
437
A
N
GLY
78
A
N
GLY
454
A
N
GLY
95
A
O
LEU
502
A
O
LEU
143
A
N
LEU
501
A
N
LEU
142
A
O
LYS
509
A
O
LYS
150
A
N
VAL
491
A
N
VAL
132
A
O
LYS
517
A
O
LYS
158
A
N
TYR
526
A
N
TYR
167
A
O
PHE
549
A
O
PHE
190
1
A
CG
LYS
405
A
CG
LYS
46
1
Y
1
A
CD
LYS
405
A
CD
LYS
46
1
Y
1
A
CE
LYS
405
A
CE
LYS
46
1
Y
1
A
NZ
LYS
405
A
NZ
LYS
46
1
Y
1
A
CG
GLU
407
A
CG
GLU
48
1
Y
1
A
CD
GLU
407
A
CD
GLU
48
1
Y
1
A
OE1
GLU
407
A
OE1
GLU
48
1
Y
1
A
OE2
GLU
407
A
OE2
GLU
48
1
Y
1
A
OG1
THR
530
A
OG1
THR
171
1
Y
1
A
CG2
THR
530
A
CG2
THR
171
1
Y
1
A
PRO
360
A
PRO
1
1
Y
1
A
LYS
361
A
LYS
2
1
Y
1
A
GLU
362
A
GLU
3
1
Y
1
A
HIS
531
A
HIS
172
1
Y
1
A
GLY
532
A
GLY
173
1
Y
1
A
LYS
533
A
LYS
174
1
Y
1
A
VAL
634
A
VAL
275
1
Y
1
A
ASN
635
A
ASN
276
1
Y
1
A
A
O
O
HOH
HOH
809
961
1.89
1
A
A
NZ
O
LYS
HOH
537
801
2.08
1
A
MET
392
-100.62
-168.87
1
A
ALA
441
-137.95
-145.52
1
A
ASP
494
-147.64
39.79
1
A
ASP
512
64.31
73.15
1
A
ASP
512
66.28
73.15
1
A
TRP
609
-91.02
32.37
83.270
27.9590
12.130
3.2300
0.0000
-0.4300
-1.8100
0.0000
-1.1900
0.9700
0.9560
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.2101
0.1720
0.1739
1.6400
20.0000
1683
31597
5.1000
99.6600
2.6880
0.0860
0.0995
RANDOM
1
THROUGHOUT
0.000
FOURIER SYNTHESIS
0.0990
0.1000
0.8000
0.8000
1.2000
OTHER IN-HOUSE COORDINATES
1.6400
20.0000
326
2542
30.92
40.17
41
0
2175
268
0.009
0.019
2285
0.002
0.020
2085
1.406
1.983
3087
0.896
3.000
4838
4.468
5.000
272
35.079
24.327
104
11.074
15.000
405
15.431
15.000
12
0.085
0.200
321
0.005
0.020
2554
0.001
0.020
466
0.3240
0.0000
0.2840
1.6820
102
2357
2459
20
99.9600
20.9
1.640
42.446
6HM7
33320
0.040
0.077
0.065
1
5.900
11.700
3.700
99.700
0.491
1.640
1.730
1.400
4846
0.297
0.575
0.491
1
3.700
99.900
0.304
1.730
1.830
2.300
4595
0.184
0.356
0.304
1
3.700
99.900
0.193
1.830
1.960
3.600
4347
0.117
0.226
0.193
1
3.700
99.900
0.127
1.960
2.120
5.400
3994
0.077
0.149
0.127
1
3.700
99.900
0.090
2.120
2.320
7.400
3708
0.055
0.106
0.090
1
3.700
99.800
0.081
2.320
2.590
7.500
3353
0.049
0.095
0.081
1
3.700
99.700
0.070
2.590
2.990
7.400
2951
0.043
0.083
0.070
1
3.600
99.600
0.049
2.990
3.670
11.300
2518
0.030
0.058
0.049
1
3.500
99.500
0.041
3.670
5.190
14.000
1932
0.025
0.048
0.041
1
3.600
99.100
0.041
5.190
42.446
8.000
1076
0.026
0.049
0.041
1
3.600
98.700
data reduction
MOSFLM
7.0.6
data scaling
SCALA
3.3.16
data extraction
PDB_EXTRACT
3.24
phasing
REFMAC
refinement
REFMAC
5.8.0189
model building
Coot
N
CRYSTAL STRUCTURE OF SPLEEN TYROSINE KINASE (SYK) IN COMPLEX WITH A 2-(PHENOXYMETHYL)PYRIDINE INHIBITOR
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
ASP
366
A
ASP
7
HELX_P
A
LYS
368
A
LYS
9
5
AA1
3
A
ASP
410
A
ASP
51
HELX_P
A
LEU
427
A
LEU
68
1
AA2
18
A
LEU
456
A
LEU
97
HELX_P
A
GLN
462
A
GLN
103
1
AA3
7
A
LYS
467
A
LYS
108
HELX_P
A
SER
488
A
SER
129
1
AA4
22
A
ALA
496
A
ALA
137
HELX_P
A
ARG
498
A
ARG
139
5
AA5
3
A
PRO
535
A
PRO
176
HELX_P
A
TYR
539
A
TYR
180
5
AA6
5
A
ALA
540
A
ALA
181
HELX_P
A
TYR
547
A
TYR
188
1
AA7
8
A
SER
550
A
SER
191
HELX_P
A
SER
567
A
SER
208
1
AA8
18
A
LYS
577
A
LYS
218
HELX_P
A
LYS
587
A
LYS
228
1
AA9
11
A
PRO
598
A
PRO
239
HELX_P
A
TRP
609
A
TRP
250
1
AB1
12
A
ASP
612
A
ASP
253
HELX_P
A
ARG
616
A
ARG
257
5
AB2
5
A
GLY
618
A
GLY
259
HELX_P
A
VAL
633
A
VAL
274
1
AB3
16
covale
1.335
both
A
ASN
524
A
C
ASN
165
1_555
A
PTR
525
A
N
PTR
166
1_555
covale
1.329
both
A
PTR
525
A
C
PTR
166
1_555
A
TYR
526
A
N
TYR
167
1_555
TRANSFERASE
SK363, SYK, non-receptor tyrosine kinase, spleen tyrosine kinase, TRANSFERASE
KSYK_HUMAN
UNP
1
337
P43405
P43405-2
PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC
EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL
RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR
EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN
337
612
6HM7
360
635
P43405
A
1
1
276
3
5
3
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
370
A
LEU
11
A
LEU
372
A
LEU
13
A
GLY
383
A
GLY
24
A
GLN
391
A
GLN
32
A
GLY
378
A
GLY
19
A
SER
379
A
SER
20
A
LEU
370
A
LEU
11
A
LEU
372
A
LEU
13
A
GLY
383
A
GLY
24
A
GLN
391
A
GLN
32
A
VAL
396
A
VAL
37
A
LEU
404
A
LEU
45
A
TRP
444
A
TRP
85
A
GLU
449
A
GLU
90
A
MET
435
A
MET
76
A
GLU
440
A
GLU
81
A
GLY
454
A
GLY
95
A
PRO
455
A
PRO
96
A
VAL
500
A
VAL
141
A
THR
504
A
THR
145
A
TYR
507
A
TYR
148
A
ILE
510
A
ILE
151
A
PHE
490
A
PHE
131
A
VAL
491
A
VAL
132
A
LYS
517
A
LYS
158
A
ALA
518
A
ALA
159
A
TYR
526
A
TYR
167
A
LYS
527
A
LYS
168
A
LYS
548
A
LYS
189
A
PHE
549
A
PHE
190
binding site for residue GDH A 701
A
GDH
701
Software
13
binding site for residue BR A 702
A
BR
702
Software
2
binding site for residue BR A 703
A
BR
703
Software
4
binding site for residue BR A 704
A
BR
704
Software
3
binding site for residue GOL A 705
A
GOL
705
Software
7
binding site for residue DMS A 706
A
DMS
706
Software
2
A
LEU
377
A
LEU
18
13
1_555
A
VAL
385
A
VAL
26
13
1_555
A
ALA
400
A
ALA
41
13
1_555
A
MET
448
A
MET
89
13
1_555
A
GLU
449
A
GLU
90
13
1_555
A
ALA
451
A
ALA
92
13
1_555
A
GLY
454
A
GLY
95
13
1_555
A
PRO
455
A
PRO
96
13
1_555
A
ARG
498
A
ARG
139
13
1_555
A
ASN
499
A
ASN
140
13
1_555
A
LEU
501
A
LEU
142
13
1_555
A
ASP
512
A
ASP
153
13
1_555
A
HOH
827
H
HOH
13
1_555
A
ARG
367
A
ARG
8
2
1_555
A
LEU
372
A
LEU
13
2
1_555
A
PRO
535
A
PRO
176
4
1_555
A
VAL
536
A
VAL
177
4
1_555
A
LYS
537
A
LYS
178
4
1_555
A
HOH
1104
H
HOH
4
1_555
A
ARG
498
A
ARG
139
3
1_555
A
HOH
863
H
HOH
3
1_555
A
HOH
1030
H
HOH
3
1_555
A
LYS
469
A
LYS
110
7
1_555
A
ASN
470
A
ASN
111
7
1_555
A
GLU
473
A
GLU
114
7
1_555
A
HIS
506
A
HIS
147
7
1_555
A
TYR
630
A
TYR
271
7
1_555
A
HOH
874
H
HOH
7
1_555
A
HOH
878
H
HOH
7
1_555
A
TYR
431
A
TYR
72
2
1_555
A
HOH
867
H
HOH
2
1_555
4
P 1 21 1