0.011550 0.000000 0.000000 -0.000000 0.011550 0.000000 0.000000 -0.000000 0.008367 0.000000 0.000000 0.000000 0000-0003-3409-1791 Falke, S. Hanhart, P. Garbe, M. Thiess, M. Betzel, C. Kehr, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 86.580 86.580 119.520 C4 H9 N O2 103.120 n ALPHA-AMINOBUTYRIC ACID L-peptide linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H19 N O3 201.263 n 4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C3 H7 N O2 89.093 D-ALANINE D-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C7 H15 N O2 145.199 n N-METHYLLEUCINE L-peptide linking C3 H2 O4 -2 102.046 MALONATE ION non-polymer C6 H13 N O2 131.173 n N-METHYLVALINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O2 89.093 n SARCOSINE peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N O N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N N N 18 S C N 19 N C N 20 N O N 21 N C N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N N N 31 S C N 32 N C N 33 N O N 34 N C N 35 N C N 36 N C N 37 N N N 38 N C N 39 N N N 40 N N N 41 N O N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N N N 58 S C N 59 N C N 60 N O N 61 N C N 62 N C N 63 N O N 64 N N N 65 N O N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N O N 81 N O N 82 N O N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 N C N 92 S C N 93 N C N 94 N O N 95 N O N 96 R C N 97 N O N 98 R C N 99 N C N 100 N C N 101 N C N 102 N C N 103 N C N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 R C N 125 N C N 126 N O N 127 N C N 128 N S N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 R C N 139 N C N 140 N C N 141 N O N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N N N 151 S C N 152 N C N 153 N O N 154 N C N 155 N C N 156 N C N 157 N O N 158 N N N 159 N O N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 N C N 175 N C N 176 N C N 177 N O N 178 N O N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N N N 190 N C N 191 N C N 192 N O N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 N C Y 204 N C Y 205 N N Y 206 N C Y 207 N C Y 208 N N N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N O N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 S C N 228 N C N 229 N C N 230 N C N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N N N 246 S C N 247 N C N 248 N O N 249 N C N 250 N C N 251 N C N 252 N C N 253 N O N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C N 272 N C N 273 N C N 274 N C N 275 N N N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C N 297 N C N 298 N S N 299 N C N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N MG N 313 N N N 314 N C N 315 S C N 316 N C N 317 N C N 318 N C N 319 N C N 320 N C N 321 N O N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N C N 339 N C N 340 N C N 341 N O N 342 N O N 343 N O N 344 N O N 345 N H N 346 N H N 347 N N N 348 N C N 349 S C N 350 N C N 351 N C N 352 N C N 353 N C N 354 N O N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C N 397 N C N 398 N C N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 N C N 411 N C N 412 N O N 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N N N 423 S C N 424 N C N 425 N O N 426 N C N 427 N O N 428 N O N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 R C N 441 N O N 442 N C N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N N N 454 S C N 455 N C N 456 N O N 457 N C Y 458 N C Y 459 N C Y 460 N C Y 461 N N Y 462 N C Y 463 N C Y 464 N C Y 465 N C Y 466 N C N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N N N 481 S C N 482 N C N 483 N O N 484 N C Y 485 N C Y 486 N C Y 487 N C Y 488 N C Y 489 N C Y 490 N C N 491 N O N 492 N O N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N N N 505 S C N 506 N C N 507 N O N 508 N C N 509 N C N 510 N C N 511 N O N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N doub N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 E doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing Y 199 N sing Y 200 N doub Y 201 N doub N 202 N sing Y 203 N sing N 204 N sing Y 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing N 363 N sing Y 364 N doub N 365 N sing Y 366 N doub N 367 N sing Y 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N doub N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N doub N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N doub N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N doub N 437 N sing N 438 N sing N 439 N sing N 440 N sing Y 441 N doub Y 442 N sing Y 443 N sing N 444 N sing Y 445 N doub Y 446 N sing Y 447 N sing N 448 N sing Y 449 N sing Y 450 N doub N 451 N sing Y 452 N doub N 453 N sing Y 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N doub N 465 N sing N 466 N sing N 467 N sing N 468 N sing Y 469 N doub Y 470 N sing Y 471 N sing N 472 N sing Y 473 N doub N 474 N sing Y 475 N doub N 476 N sing Y 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N doub N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing UK Sci Rep 2045-2322 9 9368 9368 10.1038/s41598-019-45856-y 31249367 Enzyme activity and structural features of three single-domain phloem cyclophilins from Brassica napus. 2019 0000-0003-3617-9981 10.2210/pdb6hmz/pdb pdb_00006hmz 100 1 PIXEL 2017-06-08 DECTRIS EIGER X 16M SINGLE WAVELENGTH M x-ray 1 1.0332 1.0 P14 (MX2) PETRA III, EMBL c/o DESY 1.0332 SYNCHROTRON PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) 19371.025 Peptidyl-prolyl cis-trans isomerase 5.2.1.8 1 man polymer 1220.625 Cyclosporin 1 syn polymer 24.305 MAGNESIUM ION 1 syn non-polymer 102.046 MALONATE ION 1 syn non-polymer 18.015 water 50 nat water PPIase no no MANPKVFFDILIGKMKAGRVVMELFADVTPRTADNFRALCTGEKGIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVVDGYNVVKAMEKVGSERGVTS EPVVIEDCGEIKNETSEVSN MANPKVFFDILIGKMKAGRVVMELFADVTPRTADNFRALCTGEKGIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVVDGYNVVKAMEKVGSERGVTS EPVVIEDCGEIKNETSEVSN X polypeptide(L) no yes (BMT)(ABA)(SAR)(MLE)V(MLE)A(DAL)(MLE)(MLE)(MVA) TAGLVLAALLV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Rape sample 1 180 BnaA09g35540D, GSBRNA2T00037123001 3708 Brassica napus 562 Escherichia coli Biological sequence 1 3.07 59.91 Bipyramidal crystals grew to a maximum size of approximately 0.2 mm in all three dimensions within three weeks. VAPOR DIFFUSION, SITTING DROP 7.0 The protein concentration was adjusted to 10 mg/ml. The protein solution was supplemented with cyclosporin A at a molar ratio of 2:1 and mixed with the reservoir solution containing 2.4 M sodium malonate, pH 7.0. 293 citation citation_author pdbx_database_proc chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_conn_type repository Initial release Data collection Database references Data collection Database references Derived calculations Refinement description 1 0 2018-11-21 1 1 2019-07-10 1 2 2024-01-24 _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id Germany European Commission PCIG14-GA-2013-63 0734 Germany LFF-GK06 (DELIGRAH) Germany German Research Foundation DFG KE 856_6-1 N PDBE Y PDBE 2018-09-13 REL REL MG MAGNESIUM ION MLI MALONATE ION HOH water 29910 Tolypocladium inflatum sample 1 11 4JJM PDB experimental model MG 1 3 MG MG 201 X MLI 1 4 MLI MLI 202 X HOH 54 5 HOH HOH 301 X HOH 49 5 HOH HOH 302 X HOH 12 5 HOH HOH 303 X HOH 35 5 HOH HOH 304 X HOH 65 5 HOH HOH 305 X HOH 18 5 HOH HOH 306 X HOH 60 5 HOH HOH 307 X HOH 34 5 HOH HOH 308 X HOH 24 5 HOH HOH 309 X HOH 47 5 HOH HOH 310 X HOH 26 5 HOH HOH 311 X HOH 9 5 HOH HOH 312 X HOH 68 5 HOH HOH 313 X HOH 43 5 HOH HOH 314 X HOH 45 5 HOH HOH 315 X HOH 27 5 HOH HOH 316 X HOH 50 5 HOH HOH 317 X HOH 37 5 HOH HOH 318 X HOH 4 5 HOH HOH 319 X HOH 15 5 HOH HOH 320 X HOH 6 5 HOH HOH 321 X HOH 14 5 HOH HOH 322 X HOH 8 5 HOH HOH 323 X HOH 25 5 HOH HOH 324 X HOH 1 5 HOH HOH 325 X HOH 20 5 HOH HOH 326 X HOH 70 5 HOH HOH 327 X HOH 13 5 HOH HOH 328 X HOH 46 5 HOH HOH 329 X HOH 10 5 HOH HOH 330 X HOH 7 5 HOH HOH 331 X HOH 3 5 HOH HOH 332 X HOH 17 5 HOH HOH 333 X HOH 41 5 HOH HOH 334 X HOH 22 5 HOH HOH 335 X HOH 38 5 HOH HOH 336 X HOH 59 5 HOH HOH 337 X HOH 66 5 HOH HOH 338 X HOH 5 5 HOH HOH 339 X HOH 58 5 HOH HOH 340 X HOH 39 5 HOH HOH 341 X HOH 36 5 HOH HOH 342 X HOH 2 5 HOH HOH 343 X HOH 19 5 HOH HOH 344 X HOH 16 5 HOH HOH 345 X HOH 21 5 HOH HOH 346 X HOH 30 5 HOH HOH 347 X HOH 63 5 HOH HOH 348 X HOH 69 5 HOH HOH 349 X HOH 23 5 HOH HOH 350 X 36.820 2.120 n 1 1 X ALA 2 n 2 ALA 2 X ASN 3 n 3 ASN 3 X PRO 4 n 4 PRO 4 X LYS 5 n 5 LYS 5 X VAL 6 n 6 VAL 6 X PHE 7 n 7 PHE 7 X PHE 8 n 8 PHE 8 X ASP 9 n 9 ASP 9 X ILE 10 n 10 ILE 10 X LEU 11 n 11 LEU 11 X ILE 12 n 12 ILE 12 X GLY 13 n 13 GLY 13 X LYS 14 n 14 LYS 14 X MET 15 n 15 MET 15 X LYS 16 n 16 LYS 16 X ALA 17 n 17 ALA 17 X GLY 18 n 18 GLY 18 X ARG 19 n 19 ARG 19 X VAL 20 n 20 VAL 20 X VAL 21 n 21 VAL 21 X MET 22 n 22 MET 22 X GLU 23 n 23 GLU 23 X LEU 24 n 24 LEU 24 X PHE 25 n 25 PHE 25 X ALA 26 n 26 ALA 26 X ASP 27 n 27 ASP 27 X VAL 28 n 28 VAL 28 X THR 29 n 29 THR 29 X PRO 30 n 30 PRO 30 X ARG 31 n 31 ARG 31 X THR 32 n 32 THR 32 X ALA 33 n 33 ALA 33 X ASP 34 n 34 ASP 34 X ASN 35 n 35 ASN 35 X PHE 36 n 36 PHE 36 X ARG 37 n 37 ARG 37 X ALA 38 n 38 ALA 38 X LEU 39 n 39 LEU 39 X CYS 40 n 40 CYS 40 X THR 41 n 41 THR 41 X GLY 42 n 42 GLY 42 X GLU 43 n 43 GLU 43 X LYS 44 n 44 LYS 44 X GLY 45 n 45 GLY 45 X ILE 46 n 46 ILE 46 X GLY 47 n 47 GLY 47 X GLN 48 n 48 GLN 48 X ALA 49 n 49 ALA 49 X GLY 50 n 50 GLY 50 X LYS 51 n 51 LYS 51 X ALA 52 n 52 ALA 52 X LEU 53 n 53 LEU 53 X HIS 54 n 54 HIS 54 X TYR 55 n 55 TYR 55 X LYS 56 n 56 LYS 56 X GLY 57 n 57 GLY 57 X SER 58 n 58 SER 58 X ALA 59 n 59 ALA 59 X PHE 60 n 60 PHE 60 X HIS 61 n 61 HIS 61 X ARG 62 n 62 ARG 62 X ILE 63 n 63 ILE 63 X ILE 64 n 64 ILE 64 X PRO 65 n 65 PRO 65 X GLY 66 n 66 GLY 66 X PHE 67 n 67 PHE 67 X MET 68 n 68 MET 68 X CYS 69 n 69 CYS 69 X GLN 70 n 70 GLN 70 X GLY 71 n 71 GLY 71 X GLY 72 n 72 GLY 72 X ASP 73 n 73 ASP 73 X PHE 74 n 74 PHE 74 X THR 75 n 75 THR 75 X ARG 76 n 76 ARG 76 X GLY 77 n 77 GLY 77 X ASN 78 n 78 ASN 78 X GLY 79 n 79 GLY 79 X THR 80 n 80 THR 80 X GLY 81 n 81 GLY 81 X GLY 82 n 82 GLY 82 X GLU 83 n 83 GLU 83 X SER 84 n 84 SER 84 X ILE 85 n 85 ILE 85 X TYR 86 n 86 TYR 86 X GLY 87 n 87 GLY 87 X ALA 88 n 88 ALA 88 X LYS 89 n 89 LYS 89 X PHE 90 n 90 PHE 90 X GLN 91 n 91 GLN 91 X ASP 92 n 92 ASP 92 X GLU 93 n 93 GLU 93 X ASN 94 n 94 ASN 94 X PHE 95 n 95 PHE 95 X LYS 96 n 96 LYS 96 X LEU 97 n 97 LEU 97 X LYS 98 n 98 LYS 98 X HIS 99 n 99 HIS 99 X THR 100 n 100 THR 100 X GLY 101 n 101 GLY 101 X PRO 102 n 102 PRO 102 X GLY 103 n 103 GLY 103 X ILE 104 n 104 ILE 104 X LEU 105 n 105 LEU 105 X SER 106 n 106 SER 106 X MET 107 n 107 MET 107 X ALA 108 n 108 ALA 108 X ASN 109 n 109 ASN 109 X SER 110 n 110 SER 110 X GLY 111 n 111 GLY 111 X PRO 112 n 112 PRO 112 X ASN 113 n 113 ASN 113 X THR 114 n 114 THR 114 X ASN 115 n 115 ASN 115 X GLY 116 n 116 GLY 116 X SER 117 n 117 SER 117 X GLN 118 n 118 GLN 118 X PHE 119 n 119 PHE 119 X PHE 120 n 120 PHE 120 X ILE 121 n 121 ILE 121 X CYS 122 n 122 CYS 122 X THR 123 n 123 THR 123 X ASP 124 n 124 ASP 124 X LYS 125 n 125 LYS 125 X THR 126 n 126 THR 126 X ALA 127 n 127 ALA 127 X TRP 128 n 128 TRP 128 X LEU 129 n 129 LEU 129 X ASP 130 n 130 ASP 130 X GLY 131 n 131 GLY 131 X LYS 132 n 132 LYS 132 X HIS 133 n 133 HIS 133 X VAL 134 n 134 VAL 134 X VAL 135 n 135 VAL 135 X PHE 136 n 136 PHE 136 X GLY 137 n 137 GLY 137 X LYS 138 n 138 LYS 138 X VAL 139 n 139 VAL 139 X VAL 140 n 140 VAL 140 X ASP 141 n 141 ASP 141 X GLY 142 n 142 GLY 142 X TYR 143 n 143 TYR 143 X ASN 144 n 144 ASN 144 X VAL 145 n 145 VAL 145 X VAL 146 n 146 VAL 146 X LYS 147 n 147 LYS 147 X ALA 148 n 148 ALA 148 X MET 149 n 149 MET 149 X GLU 150 n 150 GLU 150 X LYS 151 n 151 LYS 151 X VAL 152 n 152 VAL 152 X GLY 153 n 153 GLY 153 X SER 154 n 154 SER 154 X GLU 155 n 155 GLU 155 X ARG 156 n 156 ARG 156 X GLY 157 n 157 GLY 157 X VAL 158 n 158 VAL 158 X THR 159 n 159 THR 159 X SER 160 n 160 SER 160 X GLU 161 n 161 GLU 161 X PRO 162 n 162 PRO 162 X VAL 163 n 163 VAL 163 X VAL 164 n 164 VAL 164 X ILE 165 n 165 ILE 165 X GLU 166 n 166 GLU 166 X ASP 167 n 167 ASP 167 X CYS 168 n 168 CYS 168 X GLY 169 n 169 GLY 169 X GLU 170 n 170 GLU 170 X ILE 171 n 171 ILE 171 X n 172 172 X n 173 173 X n 174 174 X n 175 175 X n 176 176 X n 177 177 X n 178 178 X n 179 179 X n 180 180 X EOV 1 n 1 BMT 1 A EOV 1 n 2 ABA 2 A EOV 1 n 3 SAR 3 A EOV 1 n 4 MLE 4 A EOV 1 n 5 VAL 5 A EOV 1 n 6 MLE 6 A EOV 1 n 7 ALA 7 A EOV 1 n 8 DAL 8 A EOV 1 n 9 MLE 9 A EOV 1 n 10 MLE 10 A EOV 1 n 11 MVA 11 A author_and_software_defined_assembly PISA 2 dimeric gel filtration light scattering SAXS 1230 -15 7870 X ALA 38 A O ALA 38 1_555 X MG 201 C MG MG 1_555 X LEU 53 A O LEU 53 1_555 93.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 X N ARG 62 A N ARG 62 X O GLN 70 A O GLN 70 X N CYS 69 A N CYS 69 X O ILE 121 A O ILE 121 X O PHE 120 A O PHE 120 X N SER 106 A N SER 106 X N LEU 105 A N LEU 105 X O GLY 137 A O GLY 137 X O ASP 141 A O ASP 141 X N VAL 21 A N VAL 21 X O MET 22 A O MET 22 X N VAL 6 A N VAL 6 X N LEU 11 A N LEU 11 X O VAL 164 A O VAL 164 1 X HOH 301 E HOH 1 X HOH 316 E HOH 1 X HOH 346 E HOH 1 X MET 1 A MET 1 1 Y 1 X LYS 172 A LYS 172 1 Y 1 X ASN 173 A ASN 173 1 Y 1 X GLU 174 A GLU 174 1 Y 1 X THR 175 A THR 175 1 Y 1 X SER 176 A SER 176 1 Y 1 X GLU 177 A GLU 177 1 Y 1 X VAL 178 A VAL 178 1 Y 1 X SER 179 A SER 179 1 Y 1 X ASN 180 A ASN 180 1 Y 1 X PHE 67 -118.47 -71.40 1 X ALA 88 46.06 -114.11 1 X THR 126 -118.04 54.93 1 A MLE 6 -121.55 -157.16 97.800 33.2620 16.430 1.6800 -0.0000 0.0000 1.6800 -0.0000 -3.3600 0.9630 0.9510 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.2231 0.1838 0.1856 1.9800 70.1200 813 15368 5.0000 99.9200 4.7470 0.1210 0.1419 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1420 0.1370 0.8000 0.8000 1.2000 4jjm 1.9800 70.1200 50 1422 33.81 31.21 93 0 1279 170 0.018 0.019 1396 0.002 0.020 1357 2.011 2.016 1881 1.157 3.000 3120 6.389 5.000 169 38.626 24.286 56 15.968 15.000 221 13.449 15.000 6 0.154 0.200 204 0.009 0.020 1601 0.002 0.020 315 0.3680 0.0000 0.3380 2.0310 77 1092 1169 20 100.0000 1.977 70.1200 6HMZ 16197 0.046 0.112 0.101 1 6.100 9.200 5.600 99.800 0.466 1.980 2.080 1.600 2330 0.210 0.513 0.466 1 5.900 100.000 0.372 2.080 2.210 2.000 2203 0.172 0.412 0.372 1 5.600 100.000 0.297 2.210 2.360 2.400 2074 0.136 0.328 0.297 1 5.500 99.800 0.230 2.360 2.550 3.100 1937 0.102 0.252 0.230 1 5.800 99.900 0.180 2.550 2.800 4.000 1788 0.085 0.200 0.180 1 5.300 99.900 0.121 2.800 3.130 5.800 1633 0.054 0.133 0.121 1 5.900 100.000 0.076 3.130 3.610 8.600 1447 0.035 0.084 0.076 1 5.300 99.700 0.050 3.610 4.420 12.500 1233 0.022 0.055 0.050 1 5.900 99.800 0.048 4.420 6.250 12.300 978 0.023 0.053 0.048 1 5.300 99.300 0.034 6.250 70.1200 11.300 574 0.017 0.038 0.034 1 5.200 98.300 data scaling SCALA 3.3.22 phasing MOLREP 11.1.00 refinement REFMAC 5.8.0103 data extraction PDB_EXTRACT 3.24 data reduction iMOSFLM 7.1.1 N Crystal Structure of a Single-Domain Cyclophilin from Brassica napus Phloem Sap 1 N N 2 N N 3 N N 4 N N 5 N N X THR 29 A THR 29 HELX_P X GLY 42 A GLY 42 1 AA1 14 X THR 126 A THR 126 HELX_P X ASP 130 A ASP 130 5 AA2 5 X GLY 142 A GLY 142 HELX_P X VAL 152 A VAL 152 1 AA3 11 covale 1.352 both A BMT 1 B C BMT 1 1_555 A ABA 2 B N ABA 2 1_555 covale 1.378 both A BMT 1 B N BMT 1 1_555 A MVA 11 B C MVA 11 1_555 covale 1.340 both A ABA 2 B C ABA 2 1_555 A SAR 3 B N SAR 3 1_555 covale 1.314 both A SAR 3 B C SAR 3 1_555 A MLE 4 B N MLE 4 1_555 covale 1.313 both A MLE 4 B C MLE 4 1_555 A VAL 5 B N VAL 5 1_555 covale 1.349 both A VAL 5 B C VAL 5 1_555 A MLE 6 B N MLE 6 1_555 covale 1.323 both A MLE 6 B C MLE 6 1_555 A ALA 7 B N ALA 7 1_555 covale 1.348 both A ALA 7 B C ALA 7 1_555 A DAL 8 B N DAL 8 1_555 covale 1.333 both A DAL 8 B C DAL 8 1_555 A MLE 9 B N MLE 9 1_555 covale 1.351 both A MLE 9 B C MLE 9 1_555 A MLE 10 B N MLE 10 1_555 covale 1.364 both A MLE 10 B C MLE 10 1_555 A MVA 11 B N MVA 11 1_555 metalc 2.860 X ALA 38 A O ALA 38 1_555 X MG 201 C MG MG 1_555 metalc 2.640 X LEU 53 A O LEU 53 1_555 X MG 201 C MG MG 1_555 ISOMERASE Peptidyl-Prolyl cis/trans Isomerase, Phloem Sap, CYP-like Domain, Cyclophilin Diversity, Cyclosporin A, ISOMERASE A0A078GRH6_BRANA UNP 1 1 A0A078GRH6 MANPKVFFDILIGKMKAGRVVMELFADVTPRTADNFRALCTGEKGIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVVDGYNVVKAMEKVGSERGVTS EPVVIEDCGEIKNETSEVSN 6HMZ PDB 2 1 6HMZ 1 180 6HMZ 1 180 A0A078GRH6 X 1 1 180 1 11 6HMZ 1 11 6HMZ A 2 1 11 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel X ARG 62 A ARG 62 X ILE 64 A ILE 64 X MET 68 A MET 68 X GLY 71 A GLY 71 X PHE 119 A PHE 119 X CYS 122 A CYS 122 X ILE 104 A ILE 104 X MET 107 A MET 107 X VAL 135 A VAL 135 X ASP 141 A ASP 141 X MET 15 A MET 15 X LEU 24 A LEU 24 X LYS 5 A LYS 5 X ILE 12 A ILE 12 X VAL 163 A VAL 163 X GLU 170 A GLU 170 binding site for residue MG X 201 X MG 201 Software 5 binding site for residue MLI X 202 X MLI 202 Software 6 binding site for residues BMT A 1 and MVA A 11 A BMT 1 Software 12 binding site for residues BMT A 1 and ABA A 2 A BMT 1 Software 12 binding site for residues ABA A 2 and SAR A 3 A ABA 2 Software 7 binding site for residues SAR A 3 and MLE A 4 A SAR 3 Software 7 binding site for residues MLE A 9 and MLE A 10 A MLE 9 Software 8 binding site for residues MLE A 10 and MVA A 11 A MLE 10 Software 12 X ALA 38 A ALA 38 5 1_555 X GLY 42 A GLY 42 5 1_555 X GLU 43 A GLU 43 5 1_555 X LYS 44 A LYS 44 5 1_555 X LEU 53 A LEU 53 5 1_555 X PHE 25 A PHE 25 6 3_545 X ASP 27 A ASP 27 6 3_545 X VAL 28 A VAL 28 6 3_545 X ILE 46 A ILE 46 6 1_555 X GLY 47 A GLY 47 6 1_555 X LEU 97 A LEU 97 6 3_545 A ABA 2 B ABA 2 12 1_555 A SAR 3 B SAR 3 12 1_555 A MLE 4 B MLE 4 12 1_555 A VAL 5 B VAL 5 12 1_555 A MLE 10 B MLE 10 12 1_555 X ARG 62 A ARG 62 12 1_555 X GLN 70 A GLN 70 12 1_555 X ALA 108 A ALA 108 12 1_555 X ASN 109 A ASN 109 12 1_555 X SER 110 A SER 110 12 1_555 X PHE 120 A PHE 120 12 1_555 X HIS 133 A HIS 133 12 1_555 A SAR 3 B SAR 3 12 1_555 A MLE 4 B MLE 4 12 1_555 A VAL 5 B VAL 5 12 1_555 A MLE 10 B MLE 10 12 1_555 A MVA 11 B MVA 11 12 1_555 X ARG 62 A ARG 62 12 1_555 X GLN 70 A GLN 70 12 1_555 X GLY 79 A GLY 79 12 1_555 X ALA 108 A ALA 108 12 1_555 X ASN 109 A ASN 109 12 1_555 X SER 110 A SER 110 12 1_555 X GLN 118 A GLN 118 12 1_555 A BMT 1 B BMT 1 7 1_555 A MLE 4 B MLE 4 7 1_555 X GLY 79 A GLY 79 7 1_555 X ALA 108 A ALA 108 7 1_555 X ASN 109 A ASN 109 7 1_555 X SER 110 A SER 110 7 1_555 X GLN 118 A GLN 118 7 1_555 A BMT 1 B BMT 1 7 1_555 A ABA 2 B ABA 2 7 1_555 A VAL 5 B VAL 5 7 1_555 A MLE 6 B MLE 6 7 7_545 A MLE 6 B MLE 6 7 1_555 A ALA 7 B ALA 7 7 16_555 X GLY 79 A GLY 79 7 1_555 A BMT 1 B BMT 1 8 1_555 A ALA 7 B ALA 7 8 1_555 A ALA 7 B ALA 7 8 10_655 A DAL 8 B DAL 8 8 1_555 A MVA 11 B MVA 11 8 1_555 X ARG 62 A ARG 62 8 1_555 X PHE 67 A PHE 67 8 1_555 X TRP 128 A TRP 128 8 1_555 A BMT 1 B BMT 1 12 1_555 A ALA 7 B ALA 7 12 1_555 A ALA 7 B ALA 7 12 10_655 A DAL 8 B DAL 8 12 1_555 A MLE 9 B MLE 9 12 1_555 X ARG 62 A ARG 62 12 1_555 X PHE 67 A PHE 67 12 1_555 X GLN 70 A GLN 70 12 1_555 X ALA 108 A ALA 108 12 1_555 X ASN 109 A ASN 109 12 1_555 X PHE 120 A PHE 120 12 1_555 X HIS 133 A HIS 133 12 1_555 98 I 41 2 2