0.027236
0.015725
0.000000
0.000000
0.031450
0.000000
0.000000
0.000000
0.004542
0.00000
0.00000
0.00000
Arita, K.
Kori, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
36.716
36.716
220.147
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C8 H18 N2 O4 S
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
N
C
N
90
N
C
N
91
N
N
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
C
N
99
N
S
N
100
N
O
N
101
N
O
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
S
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
C
N
127
N
C
N
128
N
O
N
129
N
N
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
S
C
N
143
N
C
N
144
N
O
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
Y
175
N
C
Y
176
N
N
Y
177
N
C
Y
178
N
C
Y
179
N
N
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
S
C
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
N
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
N
N
264
S
C
N
265
N
C
N
266
N
O
N
267
N
C
N
268
N
C
N
269
N
S
N
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
N
N
307
S
C
N
308
N
C
N
309
N
O
N
310
N
C
N
311
N
C
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
O
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
R
C
N
342
N
O
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
N
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
N
392
N
O
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
N
N
406
S
C
N
407
N
C
N
408
N
O
N
409
N
C
N
410
N
C
N
411
N
C
N
412
N
O
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
sing
Y
174
N
doub
Y
175
N
doub
N
176
N
sing
Y
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
Y
281
N
doub
Y
282
N
sing
Y
283
N
sing
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
doub
N
288
N
sing
Y
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
sing
Y
359
N
doub
N
360
N
sing
Y
361
N
doub
N
362
N
sing
Y
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
UK
Nat Commun
2041-1723
11
1222
1222
10.1038/s41467-020-15006-4
32144273
Two distinct modes of DNMT1 recruitment ensure stable maintenance DNA methylation.
2020
0000-0002-8416-3776
0000-0002-9202-5453
0000-0003-3512-3011
0000-0002-3492-117X
0000-0001-6439-7623
0000-0003-0438-1544
0000-0002-5086-6449
0000-0002-6707-3584
10.2210/pdb6iiw/pdb
pdb_00006iiw
100
1
PIXEL
2017-11-11
DECTRIS PILATUS3 6M
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
BL-17A
Photon Factory
0.98
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-17A
7762.821
E3 ubiquitin-protein ligase UHRF1
2.3.2.27
1
man
polymer
1031.164
PCNA-associated factor
1
syn
polymer
65.409
ZINC ION
4
syn
non-polymer
238.305
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2
syn
non-polymer
18.015
water
96
nat
water
Inverted CCAAT box-binding protein of 90 kDa,Nuclear protein 95,Nuclear zinc finger protein Np95,hNp95,RING finger protein 106,RING-type E3 ubiquitin transferase UHRF1,Transcription factor ICBP90,Ubiquitin-like PHD and RING finger domain-containing protein 1,hUHRF1,Ubiquitin-like-containing PHD and RING finger domains protein 1
PAF15
no
no
GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND
GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND
A
polypeptide(L)
no
no
VRTKADSVPG
VRTKADSVPG
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
68
UHRF1, ICBP90, NP95, RNF106
9606
Homo sapiens
562
Escherichia coli
Rsetta2 (DE3)
Biological sequence
1
2.44
49.50
VAPOR DIFFUSION, SITTING DROP
7.5
0.1 M HEPES (pH 7.5), 70% (v/v) MPD
277
citation
citation_author
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2019-10-09
1
1
2020-03-18
1
2
2023-11-22
_citation.country
_citation.journal_abbrev
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_symmetry
N
PDBJ
Y
PDBJ
2018-10-07
REL
REL
1
A
O
HOH
583
6.64
ZN
ZINC ION
EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HOH
water
9606
Human
Homo sapiens
sample
1
10
3ASL
PDB
experimental model
ZN
1
3
ZN
ZN
401
A
ZN
2
3
ZN
ZN
402
A
ZN
3
3
ZN
ZN
403
A
ZN
4
3
ZN
ZN
404
A
EPE
1
4
EPE
EPE
405
A
EPE
2
4
EPE
EPE
406
A
HOH
7
5
HOH
HOH
501
A
HOH
52
5
HOH
HOH
502
A
HOH
23
5
HOH
HOH
503
A
HOH
4
5
HOH
HOH
504
A
HOH
38
5
HOH
HOH
505
A
HOH
14
5
HOH
HOH
506
A
HOH
16
5
HOH
HOH
507
A
HOH
59
5
HOH
HOH
508
A
HOH
80
5
HOH
HOH
509
A
HOH
34
5
HOH
HOH
510
A
HOH
54
5
HOH
HOH
511
A
HOH
83
5
HOH
HOH
512
A
HOH
64
5
HOH
HOH
513
A
HOH
73
5
HOH
HOH
514
A
HOH
43
5
HOH
HOH
515
A
HOH
10
5
HOH
HOH
516
A
HOH
8
5
HOH
HOH
517
A
HOH
30
5
HOH
HOH
518
A
HOH
12
5
HOH
HOH
519
A
HOH
89
5
HOH
HOH
520
A
HOH
9
5
HOH
HOH
521
A
HOH
49
5
HOH
HOH
522
A
HOH
6
5
HOH
HOH
523
A
HOH
72
5
HOH
HOH
524
A
HOH
24
5
HOH
HOH
525
A
HOH
63
5
HOH
HOH
526
A
HOH
60
5
HOH
HOH
527
A
HOH
53
5
HOH
HOH
528
A
HOH
20
5
HOH
HOH
529
A
HOH
15
5
HOH
HOH
530
A
HOH
50
5
HOH
HOH
531
A
HOH
37
5
HOH
HOH
532
A
HOH
42
5
HOH
HOH
533
A
HOH
68
5
HOH
HOH
534
A
HOH
28
5
HOH
HOH
535
A
HOH
5
5
HOH
HOH
536
A
HOH
71
5
HOH
HOH
537
A
HOH
3
5
HOH
HOH
538
A
HOH
56
5
HOH
HOH
539
A
HOH
61
5
HOH
HOH
540
A
HOH
1
5
HOH
HOH
541
A
HOH
25
5
HOH
HOH
542
A
HOH
31
5
HOH
HOH
543
A
HOH
39
5
HOH
HOH
544
A
HOH
67
5
HOH
HOH
545
A
HOH
45
5
HOH
HOH
546
A
HOH
48
5
HOH
HOH
547
A
HOH
32
5
HOH
HOH
548
A
HOH
51
5
HOH
HOH
549
A
HOH
35
5
HOH
HOH
550
A
HOH
97
5
HOH
HOH
551
A
HOH
76
5
HOH
HOH
552
A
HOH
11
5
HOH
HOH
553
A
HOH
22
5
HOH
HOH
554
A
HOH
65
5
HOH
HOH
555
A
HOH
87
5
HOH
HOH
556
A
HOH
96
5
HOH
HOH
557
A
HOH
26
5
HOH
HOH
558
A
HOH
36
5
HOH
HOH
559
A
HOH
17
5
HOH
HOH
560
A
HOH
79
5
HOH
HOH
561
A
HOH
84
5
HOH
HOH
562
A
HOH
41
5
HOH
HOH
563
A
HOH
95
5
HOH
HOH
564
A
HOH
77
5
HOH
HOH
565
A
HOH
44
5
HOH
HOH
566
A
HOH
19
5
HOH
HOH
567
A
HOH
47
5
HOH
HOH
568
A
HOH
82
5
HOH
HOH
569
A
HOH
21
5
HOH
HOH
570
A
HOH
86
5
HOH
HOH
571
A
HOH
94
5
HOH
HOH
572
A
HOH
93
5
HOH
HOH
573
A
HOH
88
5
HOH
HOH
574
A
HOH
78
5
HOH
HOH
575
A
HOH
91
5
HOH
HOH
576
A
HOH
46
5
HOH
HOH
577
A
HOH
90
5
HOH
HOH
578
A
HOH
66
5
HOH
HOH
579
A
HOH
81
5
HOH
HOH
580
A
HOH
100
5
HOH
HOH
581
A
HOH
62
5
HOH
HOH
582
A
HOH
101
5
HOH
HOH
583
A
HOH
18
5
HOH
HOH
101
B
HOH
70
5
HOH
HOH
102
B
HOH
55
5
HOH
HOH
103
B
HOH
58
5
HOH
HOH
104
B
HOH
98
5
HOH
HOH
105
B
HOH
13
5
HOH
HOH
106
B
HOH
57
5
HOH
HOH
107
B
HOH
69
5
HOH
HOH
108
B
HOH
75
5
HOH
HOH
109
B
HOH
74
5
HOH
HOH
110
B
HOH
92
5
HOH
HOH
111
B
HOH
27
5
HOH
HOH
112
B
HOH
99
5
HOH
HOH
113
B
GLY
299
n
1
GLY
299
A
PRO
300
n
2
PRO
300
A
SER
301
n
3
SER
301
A
CYS
302
n
4
CYS
302
A
LYS
303
n
5
LYS
303
A
HIS
304
n
6
HIS
304
A
CYS
305
n
7
CYS
305
A
LYS
306
n
8
LYS
306
A
ASP
307
n
9
ASP
307
A
ASP
308
n
10
ASP
308
A
VAL
309
n
11
VAL
309
A
ASN
310
n
12
ASN
310
A
ARG
311
n
13
ARG
311
A
LEU
312
n
14
LEU
312
A
CYS
313
n
15
CYS
313
A
ARG
314
n
16
ARG
314
A
VAL
315
n
17
VAL
315
A
CYS
316
n
18
CYS
316
A
ALA
317
n
19
ALA
317
A
CYS
318
n
20
CYS
318
A
HIS
319
n
21
HIS
319
A
LEU
320
n
22
LEU
320
A
CYS
321
n
23
CYS
321
A
GLY
322
n
24
GLY
322
A
GLY
323
n
25
GLY
323
A
ARG
324
n
26
ARG
324
A
GLN
325
n
27
GLN
325
A
ASP
326
n
28
ASP
326
A
PRO
327
n
29
PRO
327
A
ASP
328
n
30
ASP
328
A
LYS
329
n
31
LYS
329
A
GLN
330
n
32
GLN
330
A
LEU
331
n
33
LEU
331
A
MET
332
n
34
MET
332
A
CYS
333
n
35
CYS
333
A
ASP
334
n
36
ASP
334
A
GLU
335
n
37
GLU
335
A
CYS
336
n
38
CYS
336
A
ASP
337
n
39
ASP
337
A
MET
338
n
40
MET
338
A
ALA
339
n
41
ALA
339
A
PHE
340
n
42
PHE
340
A
HIS
341
n
43
HIS
341
A
ILE
342
n
44
ILE
342
A
TYR
343
n
45
TYR
343
A
CYS
344
n
46
CYS
344
A
LEU
345
n
47
LEU
345
A
ASP
346
n
48
ASP
346
A
PRO
347
n
49
PRO
347
A
PRO
348
n
50
PRO
348
A
LEU
349
n
51
LEU
349
A
SER
350
n
52
SER
350
A
SER
351
n
53
SER
351
A
VAL
352
n
54
VAL
352
A
PRO
353
n
55
PRO
353
A
SER
354
n
56
SER
354
A
GLU
355
n
57
GLU
355
A
ASP
356
n
58
ASP
356
A
GLU
357
n
59
GLU
357
A
TRP
358
n
60
TRP
358
A
TYR
359
n
61
TYR
359
A
CYS
360
n
62
CYS
360
A
PRO
361
n
63
PRO
361
A
GLU
362
n
64
GLU
362
A
CYS
363
n
65
CYS
363
A
ARG
364
n
66
ARG
364
A
n
67
365
A
n
68
366
A
VAL
1
n
1
VAL
1
B
ARG
2
n
2
ARG
2
B
THR
3
n
3
THR
3
B
LYS
4
n
4
LYS
4
B
ALA
5
n
5
ALA
5
B
ASP
6
n
6
ASP
6
B
n
7
7
B
n
8
8
B
n
9
9
B
n
10
10
B
7.9915
-4.0288
2.4723
2.4829
-3.1447
9.3454
-0.2906
-0.7532
-0.5412
0.6337
0.1932
0.9753
-0.3286
-0.2348
0.2841
0.3353
0.0476
0.0386
0.2682
0.0653
0.4028
refined
-21.3957
4.6290
-4.0456
X-RAY DIFFRACTION
2.8776
-0.8248
4.7589
2.0441
-2.4567
8.7266
-0.1147
0.0263
0.1826
-0.0932
-0.1777
0.3685
-0.7763
-0.6926
0.3217
0.3235
0.0958
0.0024
0.2311
0.0164
0.2689
refined
-16.6049
8.2304
-10.7213
X-RAY DIFFRACTION
2.2628
-0.5846
0.8913
2.8033
0.0844
3.7262
0.0351
0.0600
-0.0207
-0.1983
-0.1059
-0.0032
-0.1392
0.0893
0.1197
0.2177
0.0180
0.0197
0.1492
0.0255
0.1679
refined
-9.9808
2.2148
-9.7083
X-RAY DIFFRACTION
6.8367
-1.5723
1.5337
8.6159
-2.8142
4.2298
0.0976
0.4197
-0.0901
-0.8659
-0.1395
-0.0652
-0.0357
-0.1326
0.0101
0.3132
0.0656
0.0249
0.1498
-0.0062
0.1893
refined
-9.3039
-6.2980
-13.6563
X-RAY DIFFRACTION
5.5125
-1.8090
-3.7571
7.2412
1.1314
5.5225
-0.2014
-0.0486
-0.3140
0.8148
0.0733
0.3558
0.7130
-0.0175
-0.1004
0.2691
0.0407
0.0243
0.1541
0.0295
0.1973
refined
-9.0105
-9.0134
-2.6222
X-RAY DIFFRACTION
5.6805
-1.6015
-1.7460
7.4591
-2.0728
2.6453
-0.1531
-0.1768
0.1817
-0.3156
-0.2605
-0.8243
-0.1420
0.6861
0.4496
0.2049
0.0494
0.0519
0.2044
0.0696
0.2121
refined
-2.4505
-1.6073
-11.9030
X-RAY DIFFRACTION
3.1654
-0.5576
0.3439
5.3527
-4.2152
3.3189
0.0714
0.1141
-0.1466
-0.7906
-0.5324
-0.8824
0.7860
0.8878
0.1904
0.3109
0.1502
0.1394
0.3621
0.1201
0.4290
refined
2.9032
-5.7766
-15.4554
X-RAY DIFFRACTION
6.3704
4.3738
-4.2932
6.4754
-3.8085
8.0730
0.2407
0.2349
-0.7318
-0.5499
-0.5129
-1.2379
0.8245
0.2088
0.3284
0.4124
0.1519
0.0398
0.2506
0.0064
0.3392
refined
-3.2539
-15.9715
-13.9525
X-RAY DIFFRACTION
3.3748
-0.0329
-0.3249
4.0147
5.3252
7.3120
0.0089
-0.5165
-0.2210
0.4844
0.2698
-0.2965
0.6463
0.3022
-0.1526
0.2870
0.1164
0.0049
0.2171
0.0348
0.2015
refined
-2.2851
-9.8512
-3.6747
X-RAY DIFFRACTION
3.3294
-3.6190
4.5484
4.0953
-5.2009
7.1029
0.5011
0.2394
-0.3663
-0.2104
-0.2717
0.5009
0.2713
0.0307
-0.1458
0.3230
0.0215
-0.0222
0.1792
-0.0147
0.2717
refined
-11.8228
-10.5752
-12.6941
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 299 through 308 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 309 through 313 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 314 through 326 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 327 through 332 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 333 through 338 )
X-RAY DIFFRACTION
6
chain 'A' and (resid 339 through 346 )
X-RAY DIFFRACTION
7
chain 'A' and (resid 347 through 351 )
X-RAY DIFFRACTION
8
chain 'A' and (resid 352 through 356 )
X-RAY DIFFRACTION
9
chain 'A' and (resid 357 through 364 )
X-RAY DIFFRACTION
10
chain 'B' and (resid 1 through 6 )
author_and_software_defined_assembly
PISA
2
dimeric
gel filtration
950
-6
5500
A
CYS
302
A
SG
CYS
4
1_555
A
ZN
401
C
ZN
ZN
1_555
A
CYS
305
A
SG
CYS
7
1_555
110.8
A
CYS
302
A
SG
CYS
4
1_555
A
ZN
401
C
ZN
ZN
1_555
A
CYS
313
A
SG
CYS
15
1_555
109.6
A
CYS
305
A
SG
CYS
7
1_555
A
ZN
401
C
ZN
ZN
1_555
A
CYS
313
A
SG
CYS
15
1_555
112.6
A
CYS
302
A
SG
CYS
4
1_555
A
ZN
401
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
18
1_555
117.3
A
CYS
305
A
SG
CYS
7
1_555
A
ZN
401
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
18
1_555
96.7
A
CYS
313
A
SG
CYS
15
1_555
A
ZN
401
C
ZN
ZN
1_555
A
CYS
316
A
SG
CYS
18
1_555
109.4
A
CYS
318
A
SG
CYS
20
1_555
A
ZN
402
D
ZN
ZN
1_555
A
CYS
321
A
SG
CYS
23
1_555
112.0
A
CYS
318
A
SG
CYS
20
1_555
A
ZN
402
D
ZN
ZN
1_555
A
HIS
341
A
ND1
HIS
43
1_555
103.0
A
CYS
321
A
SG
CYS
23
1_555
A
ZN
402
D
ZN
ZN
1_555
A
HIS
341
A
ND1
HIS
43
1_555
98.7
A
CYS
318
A
SG
CYS
20
1_555
A
ZN
402
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
46
1_555
118.2
A
CYS
321
A
SG
CYS
23
1_555
A
ZN
402
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
46
1_555
108.9
A
HIS
341
A
ND1
HIS
43
1_555
A
ZN
402
D
ZN
ZN
1_555
A
CYS
344
A
SG
CYS
46
1_555
114.3
A
CYS
333
A
SG
CYS
35
1_555
A
ZN
403
E
ZN
ZN
1_555
A
CYS
336
A
SG
CYS
38
1_555
106.7
A
CYS
333
A
SG
CYS
35
1_555
A
ZN
403
E
ZN
ZN
1_555
A
CYS
360
A
SG
CYS
62
1_555
109.8
A
CYS
336
A
SG
CYS
38
1_555
A
ZN
403
E
ZN
ZN
1_555
A
CYS
360
A
SG
CYS
62
1_555
111.7
A
CYS
333
A
SG
CYS
35
1_555
A
ZN
403
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
65
1_555
107.1
A
CYS
336
A
SG
CYS
38
1_555
A
ZN
403
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
65
1_555
109.2
A
CYS
360
A
SG
CYS
62
1_555
A
ZN
403
E
ZN
ZN
1_555
A
CYS
363
A
SG
CYS
65
1_555
112.0
A
GLU
362
A
OE1
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
A
GLU
362
A
OE2
GLU
64
1_555
55.8
A
GLU
362
A
OE1
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
A
GLU
362
A
OE1
GLU
64
1_555
0.0
A
GLU
362
A
OE2
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
A
GLU
362
A
OE1
GLU
64
1_555
55.8
A
GLU
362
A
OE1
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
A
GLU
362
A
OE2
GLU
64
1_555
55.8
A
GLU
362
A
OE2
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
A
GLU
362
A
OE2
GLU
64
1_555
0.0
A
GLU
362
A
OE1
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
A
GLU
362
A
OE2
GLU
64
1_555
55.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
331
A
N
LEU
33
A
O
PHE
340
A
O
PHE
42
1
A
ZN
404
F
ZN
1
A
HOH
508
I
HOH
1
A
HOH
582
I
HOH
1
B
HOH
102
J
HOH
1
B
HOH
105
J
HOH
1
A
N
GLY
299
A
N
GLY
1
1
Y
1
A
S
EPE
406
H
S
EPE
1
1
N
1
A
O1S
EPE
406
H
O1S
EPE
1
1
N
1
A
O2S
EPE
406
H
O2S
EPE
1
1
N
1
A
O3S
EPE
406
H
O3S
EPE
1
1
N
1
A
ASN
365
A
ASN
67
1
Y
1
A
ASP
366
A
ASP
68
1
Y
1
B
SER
7
B
SER
7
1
Y
1
B
VAL
8
B
VAL
8
1
Y
1
B
PRO
9
B
PRO
9
1
Y
1
B
GLY
10
B
GLY
10
1
Y
1
A
ALA
317
-121.21
-154.38
0.1888
0.1763
0.1771
1.699
36.691
542
10653
5.09
99.91
0.15
1
FREE R-VALUE
1.35
MOLECULAR REPLACEMENT
18.52
0.90
1.11
3ASL
1.699
36.691
96
687
30
0
561
0.005
613
0.928
827
9.146
530
0.055
83
0.005
107
0.2144
0.1901
1.8696
119
2442
100.00
0.2036
0.1799
2.1402
131
2447
100.00
0.1873
0.1832
2.6962
139
2505
100.00
0.1825
0.1702
36.6997
153
2717
100.00
1.699
44.03
6IIW
10762
0.999
0.065
1
27.5
17.2
100
0.497
1.70
1.73
5.6
538
0.976
1
99.9
refinement
PHENIX
(1.12_2829: ???)
data reduction
XDS
data scaling
Aimless
phasing
PHASER
N
Crystal structure of human UHRF1 PHD finger in complex with PAF15
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
ASP
326
A
ASP
28
HELX_P
A
ASP
328
A
ASP
30
5
AA1
3
metalc
2.268
A
CYS
302
A
SG
CYS
4
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.350
A
CYS
305
A
SG
CYS
7
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.278
A
CYS
313
A
SG
CYS
15
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.292
A
CYS
316
A
SG
CYS
18
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.286
A
CYS
318
A
SG
CYS
20
1_555
A
ZN
402
D
ZN
ZN
1_555
metalc
2.313
A
CYS
321
A
SG
CYS
23
1_555
A
ZN
402
D
ZN
ZN
1_555
metalc
2.361
A
CYS
333
A
SG
CYS
35
1_555
A
ZN
403
E
ZN
ZN
1_555
metalc
2.339
A
CYS
336
A
SG
CYS
38
1_555
A
ZN
403
E
ZN
ZN
1_555
metalc
2.099
A
HIS
341
A
ND1
HIS
43
1_555
A
ZN
402
D
ZN
ZN
1_555
metalc
2.259
A
CYS
344
A
SG
CYS
46
1_555
A
ZN
402
D
ZN
ZN
1_555
metalc
2.330
A
CYS
360
A
SG
CYS
62
1_555
A
ZN
403
E
ZN
ZN
1_555
metalc
2.297
A
GLU
362
A
OE1
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
metalc
2.378
A
GLU
362
A
OE2
GLU
64
1_555
A
ZN
404
F
ZN
ZN
1_555
metalc
2.094
A
GLU
362
A
OE1
GLU
64
1_555
A
ZN
404
F
ZN
ZN
8_555
metalc
2.256
A
GLU
362
A
OE2
GLU
64
1_555
A
ZN
404
F
ZN
ZN
8_555
metalc
2.243
A
CYS
363
A
SG
CYS
65
1_555
A
ZN
403
E
ZN
ZN
1_555
LIGASE
DNA methylation, histone modification, replication, LIGASE
A
ASP
346
A
ASP
48
1
A
PRO
347
A
PRO
49
1.16
UHRF1_HUMAN
UNP
1
299
Q96T88
GPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND
PAF15_HUMAN
UNP
2
2
Q15004
VRTKADSVPG
299
366
6IIW
299
366
Q96T88
A
1
1
68
2
11
6IIW
1
10
Q15004
B
2
1
10
2
anti-parallel
A
GLN
330
A
GLN
32
A
MET
332
A
MET
34
A
ALA
339
A
ALA
41
A
HIS
341
A
HIS
43
binding site for residue ZN A 401
A
ZN
401
Software
4
binding site for residue ZN A 402
A
ZN
402
Software
4
binding site for residue ZN A 403
A
ZN
403
Software
4
binding site for residue ZN A 404
A
ZN
404
Software
4
binding site for residue EPE A 405
A
EPE
405
Software
8
binding site for residue EPE A 406
A
EPE
406
Software
3
A
CYS
302
A
CYS
4
4
1_555
A
CYS
305
A
CYS
7
4
1_555
A
CYS
313
A
CYS
15
4
1_555
A
CYS
316
A
CYS
18
4
1_555
A
CYS
318
A
CYS
20
4
1_555
A
CYS
321
A
CYS
23
4
1_555
A
HIS
341
A
HIS
43
4
1_555
A
CYS
344
A
CYS
46
4
1_555
A
CYS
333
A
CYS
35
4
1_555
A
CYS
336
A
CYS
38
4
1_555
A
CYS
360
A
CYS
62
4
1_555
A
CYS
363
A
CYS
65
4
1_555
A
HIS
319
A
HIS
21
4
1_555
A
HIS
319
A
HIS
21
4
8_555
A
GLU
362
A
GLU
64
4
8_555
A
GLU
362
A
GLU
64
4
1_555
A
GLY
299
A
GLY
1
8
1_555
A
PRO
300
A
PRO
2
8
1_555
A
LYS
306
A
LYS
8
8
1_555
A
ASP
307
A
ASP
9
8
1_555
A
ASP
308
A
ASP
10
8
1_555
A
VAL
309
A
VAL
11
8
1_555
A
ASP
356
A
ASP
58
8
1_565
A
HOH
527
I
HOH
8
1_555
A
TYR
359
A
TYR
61
3
1_555
A
CYS
363
A
CYS
65
3
1_555
A
ARG
364
A
ARG
66
3
1_555
178
P 61 2 2