0.029415 0.000000 0.000000 -0.000000 0.015043 0.000000 0.000000 -0.000000 0.013091 0.00000 0.00000 0.00000 0000-0001-7178-5966 Viswanathan, V. Sharma, P. Chaudhary, A. 0000-0001-6627-0669 Sharma, S. 0000-0002-2886-7963 Singh, T.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 33.996 66.474 76.387 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H8 O 60.095 N-PROPANOL 1-PROPONOL non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N O N 260 N C N 261 N C N 262 N C N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N C N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N O N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 R C N 307 N O N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N N N 320 S C N 321 N C N 322 N O N 323 N C Y 324 N C Y 325 N C Y 326 N C Y 327 N N Y 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C N 357 N O N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C N 375 N C N 376 N C N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N sing Y 324 N doub N 325 N sing Y 326 N doub N 327 N sing Y 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing To Be Published 0353 Crystal structure of the complex of peptidyl-tRNA hydrolase with N-propanol at 1.43 A resolution 10.2210/pdb6ix6/pdb pdb_00006ix6 100 1 N PIXEL 2018-11-08 DECTRIS PILATUS3 2M SINGLE WAVELENGTH M x-ray 1 0.96600 1.0 MASSIF-1 ESRF 0.96600 SYNCHROTRON ESRF BEAMLINE MASSIF-1 21222.219 Peptidyl-tRNA hydrolase 3.1.1.29 R71K 1 man polymer 60.095 N-PROPANOL 1 syn non-polymer 18.015 water 249 nat water PTH no no GSHMSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNKSGQSVV PFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNE QSLMDGAIDHALSKVKLLVQGQVPQAMNQINAYKPA GSHMSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNKSGQSVV PFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNE QSLMDGAIDHALSKVKLLVQGQVPQAMNQINAYKPA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81 sample 1 196 pth, HMPREF0010_01329 575584 Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81) 562 Escherichia coli Biological sequence 1 2.03 39.51 VAPOR DIFFUSION, HANGING DROP 7.5 12% PEG 1500, 0.1M HEPES PH 7.5 298.0 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Data collection Database references Refinement description 1 0 2018-12-26 1 1 2023-11-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession N PDBJ Y PDBJ 2018-12-09 REL REL 1 A O HOH 549 6.07 POL N-PROPANOL HOH water 5Y9A PDB experimental model POL 194 2 POL POL 201 A HOH 127 3 HOH HOH 301 A HOH 304 3 HOH HOH 302 A HOH 308 3 HOH HOH 303 A HOH 364 3 HOH HOH 304 A HOH 324 3 HOH HOH 305 A HOH 56 3 HOH HOH 306 A HOH 151 3 HOH HOH 307 A HOH 422 3 HOH HOH 308 A HOH 89 3 HOH HOH 309 A HOH 3 3 HOH HOH 310 A HOH 302 3 HOH HOH 311 A HOH 321 3 HOH HOH 312 A HOH 349 3 HOH HOH 313 A HOH 470 3 HOH HOH 314 A HOH 88 3 HOH HOH 315 A HOH 374 3 HOH HOH 316 A HOH 316 3 HOH HOH 317 A HOH 334 3 HOH HOH 318 A HOH 372 3 HOH HOH 319 A HOH 117 3 HOH HOH 320 A HOH 419 3 HOH HOH 321 A HOH 307 3 HOH HOH 322 A HOH 322 3 HOH HOH 323 A HOH 5 3 HOH HOH 324 A HOH 111 3 HOH HOH 325 A HOH 404 3 HOH HOH 326 A HOH 305 3 HOH HOH 327 A HOH 309 3 HOH HOH 328 A HOH 144 3 HOH HOH 329 A HOH 343 3 HOH HOH 330 A HOH 463 3 HOH HOH 331 A HOH 312 3 HOH HOH 332 A HOH 335 3 HOH HOH 333 A HOH 323 3 HOH HOH 334 A HOH 423 3 HOH HOH 335 A HOH 46 3 HOH HOH 336 A HOH 478 3 HOH HOH 337 A HOH 110 3 HOH HOH 338 A HOH 342 3 HOH HOH 339 A HOH 415 3 HOH HOH 340 A HOH 337 3 HOH HOH 341 A HOH 357 3 HOH HOH 342 A HOH 395 3 HOH HOH 343 A HOH 465 3 HOH HOH 344 A HOH 339 3 HOH HOH 345 A HOH 331 3 HOH HOH 346 A HOH 350 3 HOH HOH 347 A HOH 313 3 HOH HOH 348 A HOH 318 3 HOH HOH 349 A HOH 21 3 HOH HOH 350 A HOH 344 3 HOH HOH 351 A HOH 341 3 HOH HOH 352 A HOH 317 3 HOH HOH 353 A HOH 48 3 HOH HOH 354 A HOH 311 3 HOH HOH 355 A HOH 325 3 HOH HOH 356 A HOH 340 3 HOH HOH 357 A HOH 320 3 HOH HOH 358 A HOH 303 3 HOH HOH 359 A HOH 326 3 HOH HOH 360 A HOH 329 3 HOH HOH 361 A HOH 141 3 HOH HOH 362 A HOH 359 3 HOH HOH 363 A HOH 400 3 HOH HOH 364 A HOH 113 3 HOH HOH 365 A HOH 360 3 HOH HOH 366 A HOH 362 3 HOH HOH 367 A HOH 356 3 HOH HOH 368 A HOH 30 3 HOH HOH 369 A HOH 327 3 HOH HOH 370 A HOH 352 3 HOH HOH 371 A HOH 103 3 HOH HOH 372 A HOH 366 3 HOH HOH 373 A HOH 390 3 HOH HOH 374 A HOH 104 3 HOH HOH 375 A HOH 107 3 HOH HOH 376 A HOH 355 3 HOH HOH 377 A HOH 4 3 HOH HOH 378 A HOH 367 3 HOH HOH 379 A HOH 125 3 HOH HOH 380 A HOH 386 3 HOH HOH 381 A HOH 358 3 HOH HOH 382 A HOH 314 3 HOH HOH 383 A HOH 399 3 HOH HOH 384 A HOH 336 3 HOH HOH 385 A HOH 351 3 HOH HOH 386 A HOH 119 3 HOH HOH 387 A HOH 354 3 HOH HOH 388 A HOH 347 3 HOH HOH 389 A HOH 333 3 HOH HOH 390 A HOH 138 3 HOH HOH 391 A HOH 353 3 HOH HOH 392 A HOH 391 3 HOH HOH 393 A HOH 363 3 HOH HOH 394 A HOH 370 3 HOH HOH 395 A HOH 105 3 HOH HOH 396 A HOH 378 3 HOH HOH 397 A HOH 451 3 HOH HOH 398 A HOH 443 3 HOH HOH 399 A HOH 306 3 HOH HOH 400 A HOH 108 3 HOH HOH 401 A HOH 430 3 HOH HOH 402 A HOH 387 3 HOH HOH 403 A HOH 436 3 HOH HOH 404 A HOH 328 3 HOH HOH 405 A HOH 346 3 HOH HOH 406 A HOH 361 3 HOH HOH 407 A HOH 315 3 HOH HOH 408 A HOH 380 3 HOH HOH 409 A HOH 383 3 HOH HOH 410 A HOH 348 3 HOH HOH 411 A HOH 371 3 HOH HOH 412 A HOH 373 3 HOH HOH 413 A HOH 388 3 HOH HOH 414 A HOH 453 3 HOH HOH 415 A HOH 365 3 HOH HOH 416 A HOH 376 3 HOH HOH 417 A HOH 368 3 HOH HOH 418 A HOH 426 3 HOH HOH 419 A HOH 377 3 HOH HOH 420 A HOH 424 3 HOH HOH 421 A HOH 397 3 HOH HOH 422 A HOH 475 3 HOH HOH 423 A HOH 369 3 HOH HOH 424 A HOH 437 3 HOH HOH 425 A HOH 418 3 HOH HOH 426 A HOH 439 3 HOH HOH 427 A HOH 375 3 HOH HOH 428 A HOH 65 3 HOH HOH 429 A HOH 382 3 HOH HOH 430 A HOH 381 3 HOH HOH 431 A HOH 473 3 HOH HOH 432 A HOH 392 3 HOH HOH 433 A HOH 401 3 HOH HOH 434 A HOH 379 3 HOH HOH 435 A HOH 431 3 HOH HOH 436 A HOH 60 3 HOH HOH 437 A HOH 385 3 HOH HOH 438 A HOH 408 3 HOH HOH 439 A HOH 402 3 HOH HOH 440 A HOH 407 3 HOH HOH 441 A HOH 403 3 HOH HOH 442 A HOH 24 3 HOH HOH 443 A HOH 345 3 HOH HOH 444 A HOH 409 3 HOH HOH 445 A HOH 384 3 HOH HOH 446 A HOH 411 3 HOH HOH 447 A HOH 398 3 HOH HOH 448 A HOH 447 3 HOH HOH 449 A HOH 393 3 HOH HOH 450 A HOH 421 3 HOH HOH 451 A HOH 394 3 HOH HOH 452 A HOH 389 3 HOH HOH 453 A HOH 101 3 HOH HOH 454 A HOH 319 3 HOH HOH 455 A HOH 413 3 HOH HOH 456 A HOH 414 3 HOH HOH 457 A HOH 93 3 HOH HOH 458 A HOH 115 3 HOH HOH 459 A HOH 140 3 HOH HOH 460 A HOH 11 3 HOH HOH 461 A HOH 396 3 HOH HOH 462 A HOH 330 3 HOH HOH 463 A HOH 448 3 HOH HOH 464 A HOH 412 3 HOH HOH 465 A HOH 410 3 HOH HOH 466 A HOH 417 3 HOH HOH 467 A HOH 444 3 HOH HOH 468 A HOH 405 3 HOH HOH 469 A HOH 433 3 HOH HOH 470 A HOH 416 3 HOH HOH 471 A HOH 440 3 HOH HOH 472 A HOH 406 3 HOH HOH 473 A HOH 438 3 HOH HOH 474 A HOH 428 3 HOH HOH 475 A HOH 425 3 HOH HOH 476 A HOH 126 3 HOH HOH 477 A HOH 54 3 HOH HOH 478 A HOH 435 3 HOH HOH 479 A HOH 338 3 HOH HOH 480 A HOH 152 3 HOH HOH 481 A HOH 71 3 HOH HOH 482 A HOH 332 3 HOH HOH 483 A HOH 131 3 HOH HOH 484 A HOH 457 3 HOH HOH 485 A HOH 429 3 HOH HOH 486 A HOH 47 3 HOH HOH 487 A HOH 32 3 HOH HOH 488 A HOH 432 3 HOH HOH 489 A HOH 461 3 HOH HOH 490 A HOH 64 3 HOH HOH 491 A HOH 86 3 HOH HOH 492 A HOH 442 3 HOH HOH 493 A HOH 310 3 HOH HOH 494 A HOH 123 3 HOH HOH 495 A HOH 420 3 HOH HOH 496 A HOH 59 3 HOH HOH 497 A HOH 445 3 HOH HOH 498 A HOH 427 3 HOH HOH 499 A HOH 460 3 HOH HOH 500 A HOH 434 3 HOH HOH 501 A HOH 452 3 HOH HOH 502 A HOH 112 3 HOH HOH 503 A HOH 472 3 HOH HOH 504 A HOH 122 3 HOH HOH 505 A HOH 49 3 HOH HOH 506 A HOH 449 3 HOH HOH 507 A HOH 28 3 HOH HOH 508 A HOH 82 3 HOH HOH 509 A HOH 29 3 HOH HOH 510 A HOH 450 3 HOH HOH 511 A HOH 454 3 HOH HOH 512 A HOH 35 3 HOH HOH 513 A HOH 149 3 HOH HOH 514 A HOH 468 3 HOH HOH 515 A HOH 458 3 HOH HOH 516 A HOH 462 3 HOH HOH 517 A HOH 124 3 HOH HOH 518 A HOH 81 3 HOH HOH 519 A HOH 459 3 HOH HOH 520 A HOH 135 3 HOH HOH 521 A HOH 31 3 HOH HOH 522 A HOH 467 3 HOH HOH 523 A HOH 464 3 HOH HOH 524 A HOH 37 3 HOH HOH 525 A HOH 41 3 HOH HOH 526 A HOH 466 3 HOH HOH 527 A HOH 57 3 HOH HOH 528 A HOH 97 3 HOH HOH 529 A HOH 441 3 HOH HOH 530 A HOH 446 3 HOH HOH 531 A HOH 95 3 HOH HOH 532 A HOH 70 3 HOH HOH 533 A HOH 53 3 HOH HOH 534 A HOH 43 3 HOH HOH 535 A HOH 116 3 HOH HOH 536 A HOH 474 3 HOH HOH 537 A HOH 20 3 HOH HOH 538 A HOH 99 3 HOH HOH 539 A HOH 91 3 HOH HOH 540 A HOH 469 3 HOH HOH 541 A HOH 455 3 HOH HOH 542 A HOH 456 3 HOH HOH 543 A HOH 471 3 HOH HOH 544 A HOH 477 3 HOH HOH 545 A HOH 150 3 HOH HOH 546 A HOH 92 3 HOH HOH 547 A HOH 476 3 HOH HOH 548 A HOH 26 3 HOH HOH 549 A GLY -2 n 1 GLY -2 A SER -1 n 2 SER -1 A HIS 0 n 3 HIS 0 A MET 1 n 4 MET 1 A SER 2 n 5 SER 2 A ASN 3 n 6 ASN 3 A ILE 4 n 7 ILE 4 A SER 5 n 8 SER 5 A LEU 6 n 9 LEU 6 A ILE 7 n 10 ILE 7 A VAL 8 n 11 VAL 8 A GLY 9 n 12 GLY 9 A LEU 10 n 13 LEU 10 A GLY 11 n 14 GLY 11 A ASN 12 n 15 ASN 12 A PRO 13 n 16 PRO 13 A GLY 14 n 17 GLY 14 A SER 15 n 18 SER 15 A GLU 16 n 19 GLU 16 A TYR 17 n 20 TYR 17 A ALA 18 n 21 ALA 18 A GLN 19 n 22 GLN 19 A THR 20 n 23 THR 20 A ARG 21 n 24 ARG 21 A HIS 22 n 25 HIS 22 A ASN 23 n 26 ASN 23 A ALA 24 n 27 ALA 24 A GLY 25 n 28 GLY 25 A PHE 26 n 29 PHE 26 A TRP 27 n 30 TRP 27 A PHE 28 n 31 PHE 28 A VAL 29 n 32 VAL 29 A GLU 30 n 33 GLU 30 A GLN 31 n 34 GLN 31 A LEU 32 n 35 LEU 32 A ALA 33 n 36 ALA 33 A ASP 34 n 37 ASP 34 A LYS 35 n 38 LYS 35 A TYR 36 n 39 TYR 36 A GLY 37 n 40 GLY 37 A ILE 38 n 41 ILE 38 A THR 39 n 42 THR 39 A LEU 40 n 43 LEU 40 A LYS 41 n 44 LYS 41 A ASN 42 n 45 ASN 42 A ASP 43 n 46 ASP 43 A PRO 44 n 47 PRO 44 A LYS 45 n 48 LYS 45 A PHE 46 n 49 PHE 46 A HIS 47 n 50 HIS 47 A GLY 48 n 51 GLY 48 A ILE 49 n 52 ILE 49 A SER 50 n 53 SER 50 A GLY 51 n 54 GLY 51 A ARG 52 n 55 ARG 52 A GLY 53 n 56 GLY 53 A ASN 54 n 57 ASN 54 A ILE 55 n 58 ILE 55 A GLU 56 n 59 GLU 56 A GLY 57 n 60 GLY 57 A HIS 58 n 61 HIS 58 A ASP 59 n 62 ASP 59 A VAL 60 n 63 VAL 60 A ARG 61 n 64 ARG 61 A LEU 62 n 65 LEU 62 A LEU 63 n 66 LEU 63 A LEU 64 n 67 LEU 64 A PRO 65 n 68 PRO 65 A MET 66 n 69 MET 66 A THR 67 n 70 THR 67 A TYR 68 n 71 TYR 68 A MET 69 n 72 MET 69 A ASN 70 n 73 ASN 70 A LYS 71 n 74 LYS 71 A SER 72 n 75 SER 72 A GLY 73 n 76 GLY 73 A GLN 74 n 77 GLN 74 A SER 75 n 78 SER 75 A VAL 76 n 79 VAL 76 A VAL 77 n 80 VAL 77 A PRO 78 n 81 PRO 78 A PHE 79 n 82 PHE 79 A SER 80 n 83 SER 80 A LYS 81 n 84 LYS 81 A PHE 82 n 85 PHE 82 A TYR 83 n 86 TYR 83 A GLN 84 n 87 GLN 84 A ILE 85 n 88 ILE 85 A ALA 86 n 89 ALA 86 A PRO 87 n 90 PRO 87 A GLU 88 n 91 GLU 88 A ALA 89 n 92 ALA 89 A ILE 90 n 93 ILE 90 A LEU 91 n 94 LEU 91 A ILE 92 n 95 ILE 92 A ALA 93 n 96 ALA 93 A HIS 94 n 97 HIS 94 A ASP 95 n 98 ASP 95 A GLU 96 n 99 GLU 96 A LEU 97 n 100 LEU 97 A ASP 98 n 101 ASP 98 A MET 99 n 102 MET 99 A ASN 100 n 103 ASN 100 A PRO 101 n 104 PRO 101 A GLY 102 n 105 GLY 102 A VAL 103 n 106 VAL 103 A ILE 104 n 107 ILE 104 A ARG 105 n 108 ARG 105 A LEU 106 n 109 LEU 106 A LYS 107 n 110 LYS 107 A THR 108 n 111 THR 108 A GLY 109 n 112 GLY 109 A GLY 110 n 113 GLY 110 A GLY 111 n 114 GLY 111 A HIS 112 n 115 HIS 112 A GLY 113 n 116 GLY 113 A GLY 114 n 117 GLY 114 A HIS 115 n 118 HIS 115 A ASN 116 n 119 ASN 116 A GLY 117 n 120 GLY 117 A LEU 118 n 121 LEU 118 A ARG 119 n 122 ARG 119 A ASP 120 n 123 ASP 120 A ILE 121 n 124 ILE 121 A VAL 122 n 125 VAL 122 A PRO 123 n 126 PRO 123 A HIS 124 n 127 HIS 124 A ILE 125 n 128 ILE 125 A GLY 126 n 129 GLY 126 A PRO 127 n 130 PRO 127 A ASN 128 n 131 ASN 128 A PHE 129 n 132 PHE 129 A HIS 130 n 133 HIS 130 A ARG 131 n 134 ARG 131 A LEU 132 n 135 LEU 132 A ARG 133 n 136 ARG 133 A ILE 134 n 137 ILE 134 A GLY 135 n 138 GLY 135 A ILE 136 n 139 ILE 136 A GLY 137 n 140 GLY 137 A HIS 138 n 141 HIS 138 A PRO 139 n 142 PRO 139 A GLY 140 n 143 GLY 140 A SER 141 n 144 SER 141 A LYS 142 n 145 LYS 142 A GLU 143 n 146 GLU 143 A ARG 144 n 147 ARG 144 A VAL 145 n 148 VAL 145 A SER 146 n 149 SER 146 A GLY 147 n 150 GLY 147 A HIS 148 n 151 HIS 148 A VAL 149 n 152 VAL 149 A LEU 150 n 153 LEU 150 A GLY 151 n 154 GLY 151 A LYS 152 n 155 LYS 152 A ALA 153 n 156 ALA 153 A PRO 154 n 157 PRO 154 A SER 155 n 158 SER 155 A ASN 156 n 159 ASN 156 A GLU 157 n 160 GLU 157 A GLN 158 n 161 GLN 158 A SER 159 n 162 SER 159 A LEU 160 n 163 LEU 160 A MET 161 n 164 MET 161 A ASP 162 n 165 ASP 162 A GLY 163 n 166 GLY 163 A ALA 164 n 167 ALA 164 A ILE 165 n 168 ILE 165 A ASP 166 n 169 ASP 166 A HIS 167 n 170 HIS 167 A ALA 168 n 171 ALA 168 A LEU 169 n 172 LEU 169 A SER 170 n 173 SER 170 A LYS 171 n 174 LYS 171 A VAL 172 n 175 VAL 172 A LYS 173 n 176 LYS 173 A LEU 174 n 177 LEU 174 A LEU 175 n 178 LEU 175 A VAL 176 n 179 VAL 176 A GLN 177 n 180 GLN 177 A GLY 178 n 181 GLY 178 A GLN 179 n 182 GLN 179 A VAL 180 n 183 VAL 180 A PRO 181 n 184 PRO 181 A GLN 182 n 185 GLN 182 A ALA 183 n 186 ALA 183 A MET 184 n 187 MET 184 A ASN 185 n 188 ASN 185 A GLN 186 n 189 GLN 186 A ILE 187 n 190 ILE 187 A ASN 188 n 191 ASN 188 A ALA 189 n 192 ALA 189 A TYR 190 n 193 TYR 190 A LYS 191 n 194 LYS 191 A PRO 192 n 195 PRO 192 A ALA 193 n 196 ALA 193 A author_defined_assembly 1 monomeric none 220 4 8900 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LYS 41 A N LYS 44 A O SER 50 A O SER 53 A N ILE 49 A N ILE 52 A O LEU 64 A O LEU 67 A O ARG 61 A O ARG 64 A N ILE 7 A N ILE 10 A N VAL 8 A N VAL 11 A O ALA 93 A O ALA 96 A N HIS 94 A N HIS 97 A O ILE 134 A O ILE 137 A O ARG 133 A O ARG 136 A N ARG 105 A N ARG 108 1 A ASN 42 0.078 SIDE CHAIN 1 A MET 1 59.04 -138.96 1 A TYR 68 78.48 150.14 1 A ASN 128 -84.90 35.08 13.367 0.00 -0.00 -0.00 -0.27 0.00 0.27 0.971 0.955 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.19464 0.15447 0.15634 1.43 38.19 1564 29927 5.0 96.02 1.022 0.039 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.063 0.069 0.80 0.80 1.20 5Y9A 1.43 38.19 249 1747 4 0 1494 0.014 0.013 1540 0.001 0.017 1420 1.828 1.632 2078 1.773 1.575 3313 6.249 5.000 195 33.423 22.821 78 13.028 15.000 258 13.205 15.000 8 0.101 0.200 189 0.012 0.020 1749 0.002 0.020 303 1.246 1.144 783 1.197 1.141 782 1.836 1.712 977 1.844 1.714 978 2.446 1.421 757 2.445 1.422 758 3.682 2.012 1102 5.540 16.233 1765 5.354 15.175 1710 0.362 0.347 1.467 126 2168 20 95.27 1.43 38.19 6IX6 32796 0.84 0.075 1 9.11 3.6 93.7 1.43 1.55 1 refinement REFMAC 5.8.0238 data reduction XDS data scaling XSCALE phasing MOLREP N Crystal structure of the complex of peptidyl-tRNA hydrolase with N-propanol at 1.43 A resolution 1 N N 2 N N 3 N N A THR 20 A THR 23 HELX_P A HIS 22 A HIS 25 5 AA1 3 A ASN 23 A ASN 26 HELX_P A GLY 37 A GLY 40 1 AA2 15 A PRO 44 A PRO 47 HELX_P A PHE 46 A PHE 49 5 AA3 3 A TYR 68 A TYR 71 HELX_P A LYS 71 A LYS 74 5 AA4 4 A SER 72 A SER 75 HELX_P A TYR 83 A TYR 86 1 AA5 12 A ALA 86 A ALA 89 HELX_P A GLU 88 A GLU 91 5 AA6 3 A HIS 115 A HIS 118 HELX_P A ASP 120 A ASP 123 1 AA7 6 A ILE 121 A ILE 124 HELX_P A GLY 126 A GLY 129 1 AA8 6 A SER 141 A SER 144 HELX_P A GLU 143 A GLU 146 5 AA9 3 A ARG 144 A ARG 147 HELX_P A LEU 150 A LEU 153 1 AB1 7 A PRO 154 A PRO 157 HELX_P A SER 170 A SER 173 1 AB2 17 A LYS 171 A LYS 174 HELX_P A GLN 177 A GLN 180 1 AB3 7 A GLN 179 A GLN 182 HELX_P A ALA 189 A ALA 192 1 AB4 11 HYDROLASE HYDROLASE D0C9L6_ACIB2 UNP 1 1 D0C9L6 MSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFS KFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSL MDGAIDHALSKVKLLVQGQVPQAMNQINAYKPA 1 193 6IX6 1 193 D0C9L6 A 1 4 196 1 expression tag GLY -2 6IX6 A D0C9L6 UNP 1 1 expression tag SER -1 6IX6 A D0C9L6 UNP 2 1 expression tag HIS 0 6IX6 A D0C9L6 UNP 3 1 ARG engineered mutation LYS 71 6IX6 A D0C9L6 UNP 71 74 7 anti-parallel anti-parallel parallel parallel parallel anti-parallel A LYS 41 A LYS 44 A ASP 43 A ASP 46 A GLY 48 A GLY 51 A ILE 55 A ILE 58 A HIS 58 A HIS 61 A PRO 65 A PRO 68 A LEU 6 A LEU 9 A GLY 9 A GLY 12 A ILE 90 A ILE 93 A GLU 96 A GLU 99 A HIS 130 A HIS 133 A GLY 135 A GLY 138 A ILE 104 A ILE 107 A THR 108 A THR 111 binding site for residue POL A 201 A POL 201 Software 4 A ASN 12 A ASN 15 4 1_555 A HIS 22 A HIS 25 4 1_555 A MET 69 A MET 72 4 1_555 A ASN 70 A ASN 73 4 1_555 19 P 21 21 21