0.009755
0.000000
0.000000
0.000000
0.009755
0.000000
0.000000
0.000000
0.006371
0.00000
0.00000
0.00000
Chen, S.
Lu, M.
Zhang, H.
Wu, B.
Zhao, Q.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
102.512
102.512
156.962
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C23 H21 F7 N4 O3
534.427
5-[[(2~{R},3~{S})-2-[(1~{R})-1-[3,5-bis(trifluoromethyl)phenyl]ethoxy]-3-(4-fluorophenyl)morpholin-4-yl]methyl]-1,2-dihydro-1,2,4-triazol-3-one
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
C
N
90
N
C
N
91
N
C
N
92
N
C
N
93
R
C
Y
94
N
C
Y
95
N
C
Y
96
N
C
Y
97
N
C
Y
98
N
C
Y
99
N
C
N
100
N
C
N
101
R
C
N
102
S
C
N
103
N
C
N
104
N
C
Y
105
N
C
Y
106
N
C
Y
107
N
C
Y
108
N
C
Y
109
N
C
Y
110
N
C
N
111
N
F
N
112
N
F
N
113
N
F
N
114
N
F
N
115
N
F
N
116
N
F
N
117
N
F
N
118
N
N
N
119
N
N
N
120
N
N
N
121
N
N
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
N
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
N
C
Y
200
N
C
Y
201
N
N
Y
202
N
C
Y
203
N
C
Y
204
N
N
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
S
C
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
N
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
N
290
N
C
N
291
N
S
N
292
N
C
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
R
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
N
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
Y
100
N
doub
Y
101
N
sing
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
Y
106
N
doub
Y
107
N
sing
Y
108
N
doub
Y
109
N
sing
Y
110
N
sing
N
111
N
sing
Y
112
N
doub
N
113
N
sing
N
114
N
sing
Y
115
N
doub
N
116
N
sing
N
117
N
sing
Y
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
Y
201
N
sing
Y
202
N
doub
Y
203
N
doub
N
204
N
sing
Y
205
N
sing
N
206
N
sing
Y
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
Y
308
N
sing
Y
309
N
sing
N
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
Y
376
N
doub
Y
377
N
sing
Y
378
N
sing
N
379
N
sing
Y
380
N
doub
Y
381
N
sing
Y
382
N
sing
N
383
N
sing
Y
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
doub
N
388
N
sing
Y
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
doub
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
Y
404
N
doub
Y
405
N
sing
Y
406
N
sing
N
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
doub
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
UK
Nat Commun
2041-1723
10
638
638
10.1038/s41467-019-08568-5
30733446
Human substance P receptor binding mode of the antagonist drug aprepitant by NMR and crystallography.
2019
0000-0003-1825-6760
0000-0002-9682-8245
0000-0001-6550-9017
0000-0002-4522-8725
0000-0002-1936-0909
10.2210/pdb6j20/pdb
pdb_00006j20
100
1
N
PIXEL
2016-12-15
DECTRIS PILATUS3 6M
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BL41XU
SPring-8
1.0000
SYNCHROTRON
SPRING-8 BEAMLINE BL41XU
The fusion protein of Substance-P receptor NK1R (residues 2-226), mini-T4L (residues 1001-1010, 1017-1117), LINKER GGGSGG (residues 1011-1016), and NK1R (residues 237-335)
50484.844
Substance-P receptor,Endolysin
3.2.1.17
E78N,Y121W,T222R,C97A
1
man
polymer
534.427
5-[[(2~{R},3~{S})-2-[(1~{R})-1-[3,5-bis(trifluoromethyl)phenyl]ethoxy]-3-(4-fluorophenyl)morpholin-4-yl]methyl]-1,2-dihydro-1,2,4-triazol-3-one
1
syn
non-polymer
SPR,NK-1 receptor,NK-1R,Tachykinin receptor 1,Lysis protein,Lysozyme,Muramidase
no
no
DNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFANASM
AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIWSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLL
AFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGIRLWASNIFEMLRIDEGGGSG
GDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY
NQTPNRAKRVITTFRTGTWDAYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLA
MSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLE
DNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFANASM
AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIWSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLL
AFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGIRLWASNIFEMLRIDEGGGSG
GDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWY
NQTPNRAKRVITTFRTGTWDAYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLA
MSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
fall armyworm
sample
1
225
TACR1, NK1R, TAC1R
9606
Homo sapiens
7108
Spodoptera frugiperda
Biological sequence
Bacteriophage T4
fall armyworm
sample
226
235
e, T4Tp126
10665
Enterobacteria phage T4
7108
Spodoptera frugiperda
Biological sequence
Bacteriophage T4
fall armyworm
sample
236
342
e, T4Tp126
10665
Enterobacteria phage T4
7108
Spodoptera frugiperda
Biological sequence
Human
fall armyworm
sample
343
441
TACR1, NK1R, TAC1R
9606
Homo sapiens
7108
Spodoptera frugiperda
Biological sequence
1
4.08
69.88
LIPIDIC CUBIC PHASE
100mM MES, pH 6.0-6.6, 25-35% PEG 400, 200-350mM ammonium tartrate dibasic
6.0-6.6
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Refinement description
1
0
2019-03-06
1
1
2023-11-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
China
Chinese Academy of Sciences
QYZDB-SSW-SMC054
N
PDBJ
Y
PDBJ
2018-12-30
REL
REL
GBQ
5-[[(2~{R},3~{S})-2-[(1~{R})-1-[3,5-bis(trifluoromethyl)phenyl]ethoxy]-3-(4-fluorophenyl)morpholin-4-yl]methyl]-1,2-dihydro-1,2,4-triazol-3-one
4GRV
4GRV, 4U15
PDB
experimental model
4U15
4GRV, 4U15
PDB
experimental model
GBQ
1
2
GBQ
GBQ
1201
A
n
1
2
A
n
2
3
A
n
3
4
A
n
4
5
A
n
5
6
A
n
6
7
A
n
7
8
A
n
8
9
A
n
9
10
A
n
10
11
A
n
11
12
A
n
12
13
A
n
13
14
A
n
14
15
A
n
15
16
A
n
16
17
A
n
17
18
A
n
18
19
A
n
19
20
A
n
20
21
A
n
21
22
A
n
22
23
A
n
23
24
A
PHE
25
n
24
PHE
25
A
VAL
26
n
25
VAL
26
A
GLN
27
n
26
GLN
27
A
PRO
28
n
27
PRO
28
A
ALA
29
n
28
ALA
29
A
TRP
30
n
29
TRP
30
A
GLN
31
n
30
GLN
31
A
ILE
32
n
31
ILE
32
A
VAL
33
n
32
VAL
33
A
LEU
34
n
33
LEU
34
A
TRP
35
n
34
TRP
35
A
ALA
36
n
35
ALA
36
A
ALA
37
n
36
ALA
37
A
ALA
38
n
37
ALA
38
A
TYR
39
n
38
TYR
39
A
THR
40
n
39
THR
40
A
VAL
41
n
40
VAL
41
A
ILE
42
n
41
ILE
42
A
VAL
43
n
42
VAL
43
A
VAL
44
n
43
VAL
44
A
THR
45
n
44
THR
45
A
SER
46
n
45
SER
46
A
VAL
47
n
46
VAL
47
A
VAL
48
n
47
VAL
48
A
GLY
49
n
48
GLY
49
A
ASN
50
n
49
ASN
50
A
VAL
51
n
50
VAL
51
A
VAL
52
n
51
VAL
52
A
VAL
53
n
52
VAL
53
A
MET
54
n
53
MET
54
A
TRP
55
n
54
TRP
55
A
ILE
56
n
55
ILE
56
A
ILE
57
n
56
ILE
57
A
LEU
58
n
57
LEU
58
A
ALA
59
n
58
ALA
59
A
HIS
60
n
59
HIS
60
A
LYS
61
n
60
LYS
61
A
ARG
62
n
61
ARG
62
A
MET
63
n
62
MET
63
A
ARG
64
n
63
ARG
64
A
THR
65
n
64
THR
65
A
VAL
66
n
65
VAL
66
A
THR
67
n
66
THR
67
A
ASN
68
n
67
ASN
68
A
TYR
69
n
68
TYR
69
A
PHE
70
n
69
PHE
70
A
LEU
71
n
70
LEU
71
A
VAL
72
n
71
VAL
72
A
ASN
73
n
72
ASN
73
A
LEU
74
n
73
LEU
74
A
ALA
75
n
74
ALA
75
A
PHE
76
n
75
PHE
76
A
ALA
77
n
76
ALA
77
A
ASN
78
n
77
ASN
78
A
ALA
79
n
78
ALA
79
A
SER
80
n
79
SER
80
A
MET
81
n
80
MET
81
A
ALA
82
n
81
ALA
82
A
ALA
83
n
82
ALA
83
A
PHE
84
n
83
PHE
84
A
ASN
85
n
84
ASN
85
A
THR
86
n
85
THR
86
A
VAL
87
n
86
VAL
87
A
VAL
88
n
87
VAL
88
A
ASN
89
n
88
ASN
89
A
PHE
90
n
89
PHE
90
A
THR
91
n
90
THR
91
A
TYR
92
n
91
TYR
92
A
ALA
93
n
92
ALA
93
A
VAL
94
n
93
VAL
94
A
HIS
95
n
94
HIS
95
A
ASN
96
n
95
ASN
96
A
GLU
97
n
96
GLU
97
A
TRP
98
n
97
TRP
98
A
TYR
99
n
98
TYR
99
A
TYR
100
n
99
TYR
100
A
GLY
101
n
100
GLY
101
A
LEU
102
n
101
LEU
102
A
PHE
103
n
102
PHE
103
A
TYR
104
n
103
TYR
104
A
CYS
105
n
104
CYS
105
A
LYS
106
n
105
LYS
106
A
PHE
107
n
106
PHE
107
A
HIS
108
n
107
HIS
108
A
ASN
109
n
108
ASN
109
A
PHE
110
n
109
PHE
110
A
PHE
111
n
110
PHE
111
A
PRO
112
n
111
PRO
112
A
ILE
113
n
112
ILE
113
A
ALA
114
n
113
ALA
114
A
ALA
115
n
114
ALA
115
A
VAL
116
n
115
VAL
116
A
PHE
117
n
116
PHE
117
A
ALA
118
n
117
ALA
118
A
SER
119
n
118
SER
119
A
ILE
120
n
119
ILE
120
A
TRP
121
n
120
TRP
121
A
SER
122
n
121
SER
122
A
MET
123
n
122
MET
123
A
THR
124
n
123
THR
124
A
ALA
125
n
124
ALA
125
A
VAL
126
n
125
VAL
126
A
ALA
127
n
126
ALA
127
A
PHE
128
n
127
PHE
128
A
ASP
129
n
128
ASP
129
A
ARG
130
n
129
ARG
130
A
TYR
131
n
130
TYR
131
A
MET
132
n
131
MET
132
A
ALA
133
n
132
ALA
133
A
ILE
134
n
133
ILE
134
A
ILE
135
n
134
ILE
135
A
HIS
136
n
135
HIS
136
A
PRO
137
n
136
PRO
137
A
LEU
138
n
137
LEU
138
A
GLN
139
n
138
GLN
139
A
PRO
140
n
139
PRO
140
A
ARG
141
n
140
ARG
141
A
LEU
142
n
141
LEU
142
A
SER
143
n
142
SER
143
A
ALA
144
n
143
ALA
144
A
THR
145
n
144
THR
145
A
ALA
146
n
145
ALA
146
A
THR
147
n
146
THR
147
A
LYS
148
n
147
LYS
148
A
VAL
149
n
148
VAL
149
A
VAL
150
n
149
VAL
150
A
ILE
151
n
150
ILE
151
A
CYS
152
n
151
CYS
152
A
VAL
153
n
152
VAL
153
A
ILE
154
n
153
ILE
154
A
TRP
155
n
154
TRP
155
A
VAL
156
n
155
VAL
156
A
LEU
157
n
156
LEU
157
A
ALA
158
n
157
ALA
158
A
LEU
159
n
158
LEU
159
A
LEU
160
n
159
LEU
160
A
LEU
161
n
160
LEU
161
A
ALA
162
n
161
ALA
162
A
PHE
163
n
162
PHE
163
A
PRO
164
n
163
PRO
164
A
GLN
165
n
164
GLN
165
A
GLY
166
n
165
GLY
166
A
TYR
167
n
166
TYR
167
A
TYR
168
n
167
TYR
168
A
SER
169
n
168
SER
169
A
THR
170
n
169
THR
170
A
THR
171
n
170
THR
171
A
GLU
172
n
171
GLU
172
A
THR
173
n
172
THR
173
A
MET
174
n
173
MET
174
A
PRO
175
n
174
PRO
175
A
SER
176
n
175
SER
176
A
ARG
177
n
176
ARG
177
A
VAL
178
n
177
VAL
178
A
VAL
179
n
178
VAL
179
A
CYS
180
n
179
CYS
180
A
MET
181
n
180
MET
181
A
ILE
182
n
181
ILE
182
A
GLU
183
n
182
GLU
183
A
TRP
184
n
183
TRP
184
A
PRO
185
n
184
PRO
185
A
GLU
186
n
185
GLU
186
A
HIS
187
n
186
HIS
187
A
PRO
188
n
187
PRO
188
A
ASN
189
n
188
ASN
189
A
LYS
190
n
189
LYS
190
A
ILE
191
n
190
ILE
191
A
TYR
192
n
191
TYR
192
A
GLU
193
n
192
GLU
193
A
LYS
194
n
193
LYS
194
A
VAL
195
n
194
VAL
195
A
TYR
196
n
195
TYR
196
A
HIS
197
n
196
HIS
197
A
ILE
198
n
197
ILE
198
A
CYS
199
n
198
CYS
199
A
VAL
200
n
199
VAL
200
A
THR
201
n
200
THR
201
A
VAL
202
n
201
VAL
202
A
LEU
203
n
202
LEU
203
A
ILE
204
n
203
ILE
204
A
TYR
205
n
204
TYR
205
A
PHE
206
n
205
PHE
206
A
LEU
207
n
206
LEU
207
A
PRO
208
n
207
PRO
208
A
LEU
209
n
208
LEU
209
A
LEU
210
n
209
LEU
210
A
VAL
211
n
210
VAL
211
A
ILE
212
n
211
ILE
212
A
GLY
213
n
212
GLY
213
A
TYR
214
n
213
TYR
214
A
ALA
215
n
214
ALA
215
A
TYR
216
n
215
TYR
216
A
THR
217
n
216
THR
217
A
VAL
218
n
217
VAL
218
A
VAL
219
n
218
VAL
219
A
GLY
220
n
219
GLY
220
A
ILE
221
n
220
ILE
221
A
ARG
222
n
221
ARG
222
A
LEU
223
n
222
LEU
223
A
TRP
224
n
223
TRP
224
A
ALA
225
n
224
ALA
225
A
SER
226
n
225
SER
226
A
ASN
1001
n
226
ASN
1001
A
ILE
1002
n
227
ILE
1002
A
PHE
1003
n
228
PHE
1003
A
GLU
1004
n
229
GLU
1004
A
MET
1005
n
230
MET
1005
A
LEU
1006
n
231
LEU
1006
A
ARG
1007
n
232
ARG
1007
A
ILE
1008
n
233
ILE
1008
A
ASP
1009
n
234
ASP
1009
A
GLU
1010
n
235
GLU
1010
A
n
236
1011
A
n
237
1012
A
n
238
1013
A
n
239
1014
A
n
240
1015
A
n
241
1016
A
ASP
1017
n
242
ASP
1017
A
GLU
1018
n
243
GLU
1018
A
ALA
1019
n
244
ALA
1019
A
GLU
1020
n
245
GLU
1020
A
LYS
1021
n
246
LYS
1021
A
LEU
1022
n
247
LEU
1022
A
PHE
1023
n
248
PHE
1023
A
ASN
1024
n
249
ASN
1024
A
GLN
1025
n
250
GLN
1025
A
ASP
1026
n
251
ASP
1026
A
VAL
1027
n
252
VAL
1027
A
ASP
1028
n
253
ASP
1028
A
ALA
1029
n
254
ALA
1029
A
ALA
1030
n
255
ALA
1030
A
VAL
1031
n
256
VAL
1031
A
ARG
1032
n
257
ARG
1032
A
GLY
1033
n
258
GLY
1033
A
ILE
1034
n
259
ILE
1034
A
LEU
1035
n
260
LEU
1035
A
ARG
1036
n
261
ARG
1036
A
ASN
1037
n
262
ASN
1037
A
ALA
1038
n
263
ALA
1038
A
LYS
1039
n
264
LYS
1039
A
LEU
1040
n
265
LEU
1040
A
LYS
1041
n
266
LYS
1041
A
PRO
1042
n
267
PRO
1042
A
VAL
1043
n
268
VAL
1043
A
TYR
1044
n
269
TYR
1044
A
ASP
1045
n
270
ASP
1045
A
SER
1046
n
271
SER
1046
A
LEU
1047
n
272
LEU
1047
A
ASP
1048
n
273
ASP
1048
A
ALA
1049
n
274
ALA
1049
A
VAL
1050
n
275
VAL
1050
A
ARG
1051
n
276
ARG
1051
A
ARG
1052
n
277
ARG
1052
A
ALA
1053
n
278
ALA
1053
A
ALA
1054
n
279
ALA
1054
A
LEU
1055
n
280
LEU
1055
A
ILE
1056
n
281
ILE
1056
A
ASN
1057
n
282
ASN
1057
A
MET
1058
n
283
MET
1058
A
VAL
1059
n
284
VAL
1059
A
PHE
1060
n
285
PHE
1060
A
GLN
1061
n
286
GLN
1061
A
MET
1062
n
287
MET
1062
A
GLY
1063
n
288
GLY
1063
A
GLU
1064
n
289
GLU
1064
A
THR
1065
n
290
THR
1065
A
GLY
1066
n
291
GLY
1066
A
VAL
1067
n
292
VAL
1067
A
ALA
1068
n
293
ALA
1068
A
GLY
1069
n
294
GLY
1069
A
PHE
1070
n
295
PHE
1070
A
THR
1071
n
296
THR
1071
A
ASN
1072
n
297
ASN
1072
A
SER
1073
n
298
SER
1073
A
LEU
1074
n
299
LEU
1074
A
ARG
1075
n
300
ARG
1075
A
MET
1076
n
301
MET
1076
A
LEU
1077
n
302
LEU
1077
A
GLN
1078
n
303
GLN
1078
A
GLN
1079
n
304
GLN
1079
A
LYS
1080
n
305
LYS
1080
A
ARG
1081
n
306
ARG
1081
A
TRP
1082
n
307
TRP
1082
A
ASP
1083
n
308
ASP
1083
A
GLU
1084
n
309
GLU
1084
A
ALA
1085
n
310
ALA
1085
A
ALA
1086
n
311
ALA
1086
A
VAL
1087
n
312
VAL
1087
A
ASN
1088
n
313
ASN
1088
A
LEU
1089
n
314
LEU
1089
A
ALA
1090
n
315
ALA
1090
A
LYS
1091
n
316
LYS
1091
A
SER
1092
n
317
SER
1092
A
ARG
1093
n
318
ARG
1093
A
TRP
1094
n
319
TRP
1094
A
TYR
1095
n
320
TYR
1095
A
ASN
1096
n
321
ASN
1096
A
GLN
1097
n
322
GLN
1097
A
THR
1098
n
323
THR
1098
A
PRO
1099
n
324
PRO
1099
A
ASN
1100
n
325
ASN
1100
A
ARG
1101
n
326
ARG
1101
A
ALA
1102
n
327
ALA
1102
A
LYS
1103
n
328
LYS
1103
A
ARG
1104
n
329
ARG
1104
A
VAL
1105
n
330
VAL
1105
A
ILE
1106
n
331
ILE
1106
A
THR
1107
n
332
THR
1107
A
THR
1108
n
333
THR
1108
A
PHE
1109
n
334
PHE
1109
A
ARG
1110
n
335
ARG
1110
A
THR
1111
n
336
THR
1111
A
GLY
1112
n
337
GLY
1112
A
THR
1113
n
338
THR
1113
A
TRP
1114
n
339
TRP
1114
A
ASP
1115
n
340
ASP
1115
A
ALA
1116
n
341
ALA
1116
A
TYR
1117
n
342
TYR
1117
A
HIS
237
n
343
HIS
237
A
GLU
238
n
344
GLU
238
A
GLN
239
n
345
GLN
239
A
VAL
240
n
346
VAL
240
A
SER
241
n
347
SER
241
A
ALA
242
n
348
ALA
242
A
LYS
243
n
349
LYS
243
A
ARG
244
n
350
ARG
244
A
LYS
245
n
351
LYS
245
A
VAL
246
n
352
VAL
246
A
VAL
247
n
353
VAL
247
A
LYS
248
n
354
LYS
248
A
MET
249
n
355
MET
249
A
MET
250
n
356
MET
250
A
ILE
251
n
357
ILE
251
A
VAL
252
n
358
VAL
252
A
VAL
253
n
359
VAL
253
A
VAL
254
n
360
VAL
254
A
CYS
255
n
361
CYS
255
A
THR
256
n
362
THR
256
A
PHE
257
n
363
PHE
257
A
ALA
258
n
364
ALA
258
A
ILE
259
n
365
ILE
259
A
CYS
260
n
366
CYS
260
A
TRP
261
n
367
TRP
261
A
LEU
262
n
368
LEU
262
A
PRO
263
n
369
PRO
263
A
PHE
264
n
370
PHE
264
A
HIS
265
n
371
HIS
265
A
ILE
266
n
372
ILE
266
A
PHE
267
n
373
PHE
267
A
PHE
268
n
374
PHE
268
A
LEU
269
n
375
LEU
269
A
LEU
270
n
376
LEU
270
A
PRO
271
n
377
PRO
271
A
TYR
272
n
378
TYR
272
A
ILE
273
n
379
ILE
273
A
ASN
274
n
380
ASN
274
A
PRO
275
n
381
PRO
275
A
ASP
276
n
382
ASP
276
A
LEU
277
n
383
LEU
277
A
TYR
278
n
384
TYR
278
A
LEU
279
n
385
LEU
279
A
LYS
280
n
386
LYS
280
A
LYS
281
n
387
LYS
281
A
PHE
282
n
388
PHE
282
A
ILE
283
n
389
ILE
283
A
GLN
284
n
390
GLN
284
A
GLN
285
n
391
GLN
285
A
VAL
286
n
392
VAL
286
A
TYR
287
n
393
TYR
287
A
LEU
288
n
394
LEU
288
A
ALA
289
n
395
ALA
289
A
ILE
290
n
396
ILE
290
A
MET
291
n
397
MET
291
A
TRP
292
n
398
TRP
292
A
LEU
293
n
399
LEU
293
A
ALA
294
n
400
ALA
294
A
MET
295
n
401
MET
295
A
SER
296
n
402
SER
296
A
SER
297
n
403
SER
297
A
THR
298
n
404
THR
298
A
MET
299
n
405
MET
299
A
TYR
300
n
406
TYR
300
A
ASN
301
n
407
ASN
301
A
PRO
302
n
408
PRO
302
A
ILE
303
n
409
ILE
303
A
ILE
304
n
410
ILE
304
A
TYR
305
n
411
TYR
305
A
CYS
306
n
412
CYS
306
A
CYS
307
n
413
CYS
307
A
LEU
308
n
414
LEU
308
A
ASN
309
n
415
ASN
309
A
ASP
310
n
416
ASP
310
A
ARG
311
n
417
ARG
311
A
PHE
312
n
418
PHE
312
A
ARG
313
n
419
ARG
313
A
LEU
314
n
420
LEU
314
A
GLY
315
n
421
GLY
315
A
PHE
316
n
422
PHE
316
A
LYS
317
n
423
LYS
317
A
HIS
318
n
424
HIS
318
A
ALA
319
n
425
ALA
319
A
PHE
320
n
426
PHE
320
A
ARG
321
n
427
ARG
321
A
n
428
322
A
n
429
323
A
n
430
324
A
n
431
325
A
n
432
326
A
n
433
327
A
n
434
328
A
n
435
329
A
n
436
330
A
n
437
331
A
n
438
332
A
n
439
333
A
n
440
334
A
n
441
335
A
0.0307
0.4222
0.5839
1.4075
1.7571
4.8976
0.0360
0.0534
0.0278
-0.0904
-0.1728
-0.1261
-0.5015
0.7599
0.1368
-0.4676
0.0604
-0.0147
-0.2220
0.1099
-0.4724
refined
-86.8273
55.3825
343.9060
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
{ A|* }
author_defined_assembly
1
monomeric
gel filtration
0
0
20800
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
170
A
N
THR
169
A
O
MET
181
A
O
MET
180
1
A
CG
PHE
25
A
CG
PHE
24
1
Y
1
A
CD1
PHE
25
A
CD1
PHE
24
1
Y
1
A
CD2
PHE
25
A
CD2
PHE
24
1
Y
1
A
CE1
PHE
25
A
CE1
PHE
24
1
Y
1
A
CE2
PHE
25
A
CE2
PHE
24
1
Y
1
A
CZ
PHE
25
A
CZ
PHE
24
1
Y
1
A
CG
TRP
30
A
CG
TRP
29
1
Y
1
A
CD1
TRP
30
A
CD1
TRP
29
1
Y
1
A
CD2
TRP
30
A
CD2
TRP
29
1
Y
1
A
NE1
TRP
30
A
NE1
TRP
29
1
Y
1
A
CE2
TRP
30
A
CE2
TRP
29
1
Y
1
A
CE3
TRP
30
A
CE3
TRP
29
1
Y
1
A
CZ2
TRP
30
A
CZ2
TRP
29
1
Y
1
A
CZ3
TRP
30
A
CZ3
TRP
29
1
Y
1
A
CH2
TRP
30
A
CH2
TRP
29
1
Y
1
A
CG
LYS
61
A
CG
LYS
60
1
Y
1
A
CD
LYS
61
A
CD
LYS
60
1
Y
1
A
CE
LYS
61
A
CE
LYS
60
1
Y
1
A
NZ
LYS
61
A
NZ
LYS
60
1
Y
1
A
CG
ARG
62
A
CG
ARG
61
1
Y
1
A
CD
ARG
62
A
CD
ARG
61
1
Y
1
A
NE
ARG
62
A
NE
ARG
61
1
Y
1
A
CZ
ARG
62
A
CZ
ARG
61
1
Y
1
A
NH1
ARG
62
A
NH1
ARG
61
1
Y
1
A
NH2
ARG
62
A
NH2
ARG
61
1
Y
1
A
CG
ARG
64
A
CG
ARG
63
1
Y
1
A
CD
ARG
64
A
CD
ARG
63
1
Y
1
A
NE
ARG
64
A
NE
ARG
63
1
Y
1
A
CZ
ARG
64
A
CZ
ARG
63
1
Y
1
A
NH1
ARG
64
A
NH1
ARG
63
1
Y
1
A
NH2
ARG
64
A
NH2
ARG
63
1
Y
1
A
CG
LEU
142
A
CG
LEU
141
1
Y
1
A
CD1
LEU
142
A
CD1
LEU
141
1
Y
1
A
CD2
LEU
142
A
CD2
LEU
141
1
Y
1
A
OG
SER
176
A
OG
SER
175
1
Y
1
A
CG
LYS
190
A
CG
LYS
189
1
Y
1
A
CD
LYS
190
A
CD
LYS
189
1
Y
1
A
CE
LYS
190
A
CE
LYS
189
1
Y
1
A
NZ
LYS
190
A
NZ
LYS
189
1
Y
1
A
CG
LYS
194
A
CG
LYS
193
1
Y
1
A
CD
LYS
194
A
CD
LYS
193
1
Y
1
A
CE
LYS
194
A
CE
LYS
193
1
Y
1
A
NZ
LYS
194
A
NZ
LYS
193
1
Y
1
A
CG
ASP
1017
A
CG
ASP
242
1
Y
1
A
OD1
ASP
1017
A
OD1
ASP
242
1
Y
1
A
OD2
ASP
1017
A
OD2
ASP
242
1
Y
1
A
CG
GLU
1018
A
CG
GLU
243
1
Y
1
A
CD
GLU
1018
A
CD
GLU
243
1
Y
1
A
OE1
GLU
1018
A
OE1
GLU
243
1
Y
1
A
OE2
GLU
1018
A
OE2
GLU
243
1
Y
1
A
CG
GLU
1020
A
CG
GLU
245
1
Y
1
A
CD
GLU
1020
A
CD
GLU
245
1
Y
1
A
OE1
GLU
1020
A
OE1
GLU
245
1
Y
1
A
OE2
GLU
1020
A
OE2
GLU
245
1
Y
1
A
CG
GLN
1025
A
CG
GLN
250
1
Y
1
A
CD
GLN
1025
A
CD
GLN
250
1
Y
1
A
OE1
GLN
1025
A
OE1
GLN
250
1
Y
1
A
NE2
GLN
1025
A
NE2
GLN
250
1
Y
1
A
CG
LYS
1103
A
CG
LYS
328
1
Y
1
A
CD
LYS
1103
A
CD
LYS
328
1
Y
1
A
CE
LYS
1103
A
CE
LYS
328
1
Y
1
A
NZ
LYS
1103
A
NZ
LYS
328
1
Y
1
A
CG
LYS
243
A
CG
LYS
349
1
Y
1
A
CD
LYS
243
A
CD
LYS
349
1
Y
1
A
CE
LYS
243
A
CE
LYS
349
1
Y
1
A
NZ
LYS
243
A
NZ
LYS
349
1
Y
1
A
CG
LEU
277
A
CG
LEU
383
1
Y
1
A
CD1
LEU
277
A
CD1
LEU
383
1
Y
1
A
CD2
LEU
277
A
CD2
LEU
383
1
Y
1
A
CG
TYR
278
A
CG
TYR
384
1
Y
1
A
CD1
TYR
278
A
CD1
TYR
384
1
Y
1
A
CD2
TYR
278
A
CD2
TYR
384
1
Y
1
A
CE1
TYR
278
A
CE1
TYR
384
1
Y
1
A
CE2
TYR
278
A
CE2
TYR
384
1
Y
1
A
CZ
TYR
278
A
CZ
TYR
384
1
Y
1
A
OH
TYR
278
A
OH
TYR
384
1
Y
1
A
CG
LEU
279
A
CG
LEU
385
1
Y
1
A
CD1
LEU
279
A
CD1
LEU
385
1
Y
1
A
CD2
LEU
279
A
CD2
LEU
385
1
Y
1
A
CG
LYS
280
A
CG
LYS
386
1
Y
1
A
CD
LYS
280
A
CD
LYS
386
1
Y
1
A
CE
LYS
280
A
CE
LYS
386
1
Y
1
A
NZ
LYS
280
A
NZ
LYS
386
1
Y
1
A
CG
LYS
281
A
CG
LYS
387
1
Y
1
A
CD
LYS
281
A
CD
LYS
387
1
Y
1
A
CE
LYS
281
A
CE
LYS
387
1
Y
1
A
NZ
LYS
281
A
NZ
LYS
387
1
Y
1
A
CG
PHE
282
A
CG
PHE
388
1
Y
1
A
CD1
PHE
282
A
CD1
PHE
388
1
Y
1
A
CD2
PHE
282
A
CD2
PHE
388
1
Y
1
A
CE1
PHE
282
A
CE1
PHE
388
1
Y
1
A
CE2
PHE
282
A
CE2
PHE
388
1
Y
1
A
CZ
PHE
282
A
CZ
PHE
388
1
Y
1
A
CG
HIS
318
A
CG
HIS
424
1
Y
1
A
ND1
HIS
318
A
ND1
HIS
424
1
Y
1
A
CD2
HIS
318
A
CD2
HIS
424
1
Y
1
A
CE1
HIS
318
A
CE1
HIS
424
1
Y
1
A
NE2
HIS
318
A
NE2
HIS
424
1
Y
1
A
CG
PHE
320
A
CG
PHE
426
1
Y
1
A
CD1
PHE
320
A
CD1
PHE
426
1
Y
1
A
CD2
PHE
320
A
CD2
PHE
426
1
Y
1
A
CE1
PHE
320
A
CE1
PHE
426
1
Y
1
A
CE2
PHE
320
A
CE2
PHE
426
1
Y
1
A
CZ
PHE
320
A
CZ
PHE
426
1
Y
1
A
CG
ARG
321
A
CG
ARG
427
1
Y
1
A
CD
ARG
321
A
CD
ARG
427
1
Y
1
A
NE
ARG
321
A
NE
ARG
427
1
Y
1
A
CZ
ARG
321
A
CZ
ARG
427
1
Y
1
A
NH1
ARG
321
A
NH1
ARG
427
1
Y
1
A
NH2
ARG
321
A
NH2
ARG
427
1
Y
1
A
ASP
2
A
ASP
1
1
Y
1
A
ASN
3
A
ASN
2
1
Y
1
A
VAL
4
A
VAL
3
1
Y
1
A
LEU
5
A
LEU
4
1
Y
1
A
PRO
6
A
PRO
5
1
Y
1
A
VAL
7
A
VAL
6
1
Y
1
A
ASP
8
A
ASP
7
1
Y
1
A
SER
9
A
SER
8
1
Y
1
A
ASP
10
A
ASP
9
1
Y
1
A
LEU
11
A
LEU
10
1
Y
1
A
SER
12
A
SER
11
1
Y
1
A
PRO
13
A
PRO
12
1
Y
1
A
ASN
14
A
ASN
13
1
Y
1
A
ILE
15
A
ILE
14
1
Y
1
A
SER
16
A
SER
15
1
Y
1
A
THR
17
A
THR
16
1
Y
1
A
ASN
18
A
ASN
17
1
Y
1
A
THR
19
A
THR
18
1
Y
1
A
SER
20
A
SER
19
1
Y
1
A
GLU
21
A
GLU
20
1
Y
1
A
PRO
22
A
PRO
21
1
Y
1
A
ASN
23
A
ASN
22
1
Y
1
A
GLN
24
A
GLN
23
1
Y
1
A
GLY
1011
A
GLY
236
1
Y
1
A
GLY
1012
A
GLY
237
1
Y
1
A
GLY
1013
A
GLY
238
1
Y
1
A
SER
1014
A
SER
239
1
Y
1
A
GLY
1015
A
GLY
240
1
Y
1
A
GLY
1016
A
GLY
241
1
Y
1
A
CYS
322
A
CYS
428
1
Y
1
A
CYS
323
A
CYS
429
1
Y
1
A
PRO
324
A
PRO
430
1
Y
1
A
PHE
325
A
PHE
431
1
Y
1
A
ILE
326
A
ILE
432
1
Y
1
A
SER
327
A
SER
433
1
Y
1
A
ALA
328
A
ALA
434
1
Y
1
A
GLY
329
A
GLY
435
1
Y
1
A
ASP
330
A
ASP
436
1
Y
1
A
TYR
331
A
TYR
437
1
Y
1
A
GLU
332
A
GLU
438
1
Y
1
A
GLY
333
A
GLY
439
1
Y
1
A
LEU
334
A
LEU
440
1
Y
1
A
GLU
335
A
GLU
441
1
Y
1
A
LYS
61
65.17
-19.46
1
A
ARG
64
-66.64
84.76
1
A
VAL
66
68.76
-58.54
1
A
HIS
136
-119.80
66.49
1
A
ASN
189
-146.89
12.97
1
A
TYR
205
-137.40
-82.53
1
A
ARG
1081
-102.69
72.78
1
A
PRO
271
-53.18
-7.58
1
A
LYS
281
-67.10
-175.54
114.89
-9.12860
0.00000
0.00000
-9.12860
0.00000
18.25720
0.915
0.922
0.260
0.000
0.233
0.234
2.70
46.60
1201
23622
5.080
99.8
0.339
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.334
0.253
0.257
4GRV, 4U15
0.44
2.70
46.60
0
3184
37
0
3147
0.009
3277
HARMONIC
2.00
1.00
4490
HARMONIC
2.00
1041
SINUSOIDAL
2.00
51
HARMONIC
2.00
481
HARMONIC
5.00
3277
HARMONIC
20.00
2.46
19.62
442
SEMIHARMONIC
5.00
3746
SEMIHARMONIC
4.00
0.247
0.000
0.209
0.210
2.82
126
2648
2774
12
4.54
98.68
101.91
2.6
50
6J20
26005
0.99
0.13
1
8.3
9.2
99
0.99
2.70
2.83
2240
0.50
1
60
refinement
BUSTER
2.10.2
data reduction
XDS
data scaling
XSCALE
phasing
PHASER
N
Crystal structure of the human NK1 substance P receptor
1
N
N
2
N
N
A
PRO
28
A
PRO
27
HELX_P
A
LYS
61
A
LYS
60
1
AA1
34
A
VAL
66
A
VAL
65
HELX_P
A
ASN
96
A
ASN
95
1
AA2
31
A
TYR
100
A
TYR
99
HELX_P
A
HIS
136
A
HIS
135
1
AA3
37
A
SER
143
A
SER
142
HELX_P
A
TYR
168
A
TYR
167
1
AA4
26
A
LYS
190
A
LYS
189
HELX_P
A
TYR
205
A
TYR
204
1
AA5
16
A
TYR
205
A
TYR
204
HELX_P
A
ALA
225
A
ALA
224
1
AA6
21
A
ASN
1001
A
ASN
226
HELX_P
A
GLU
1010
A
GLU
235
1
AA7
10
A
LEU
1022
A
LEU
247
HELX_P
A
LEU
1035
A
LEU
260
1
AA8
14
A
LEU
1040
A
LEU
265
HELX_P
A
LEU
1047
A
LEU
272
1
AA9
8
A
ASP
1048
A
ASP
273
HELX_P
A
ALA
1068
A
ALA
293
1
AB1
21
A
PHE
1070
A
PHE
295
HELX_P
A
GLN
1079
A
GLN
304
1
AB2
10
A
ARG
1081
A
ARG
306
HELX_P
A
ALA
1090
A
ALA
315
1
AB3
10
A
SER
1092
A
SER
317
HELX_P
A
THR
1098
A
THR
323
1
AB4
7
A
THR
1098
A
THR
323
HELX_P
A
GLY
1112
A
GLY
337
1
AB5
15
A
TRP
1114
A
TRP
339
HELX_P
A
HIS
237
A
HIS
343
5
AB6
5
A
SER
241
A
SER
347
HELX_P
A
ASN
274
A
ASN
380
1
AB7
34
A
ASN
274
A
ASN
380
HELX_P
A
LYS
281
A
LYS
387
1
AB8
8
A
PHE
282
A
PHE
388
HELX_P
A
ASN
309
A
ASN
415
1
AB9
28
A
ASN
309
A
ASN
415
HELX_P
A
ALA
319
A
ALA
425
1
AC1
11
disulf
2.043
A
CYS
105
A
SG
CYS
104
1_555
A
CYS
180
A
SG
CYS
179
1_555
MEMBRANE PROTEIN
GPCR, Complex, Antagonist, signalling protein, MEMBRANE PROTEIN
NK1R_HUMAN
UNP
1
2
P25103
DNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASM
AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLL
AFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWAS
D9IEF7_BPT4
UNP
1
2
D9IEF7
NIFEMLRIDE
D9IEF7_BPT4
UNP
1
61
D9IEF7
DEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYN
QTPNRAKRVITTFRTGTWDAY
NK1R_HUMAN
UNP
1
237
P25103
HEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGF
KHAFRCCPFISAGDYEGLE
2
226
6J20
2
226
P25103
A
1
1
225
2
11
6J20
1001
1010
D9IEF7
A
2
226
235
61
161
6J20
1017
1117
D9IEF7
A
3
242
342
237
335
6J20
237
335
P25103
A
4
343
441
1
GLU
engineered mutation
ASN
78
6J20
A
P25103
UNP
78
77
1
TYR
engineered mutation
TRP
121
6J20
A
P25103
UNP
121
120
1
THR
engineered mutation
ARG
222
6J20
A
P25103
UNP
222
221
2
linker
GLY
1011
6J20
A
D9IEF7
UNP
236
2
linker
GLY
1012
6J20
A
D9IEF7
UNP
237
2
linker
GLY
1013
6J20
A
D9IEF7
UNP
238
2
linker
SER
1014
6J20
A
D9IEF7
UNP
239
2
linker
GLY
1015
6J20
A
D9IEF7
UNP
240
2
linker
GLY
1016
6J20
A
D9IEF7
UNP
241
3
CYS
engineered mutation
ALA
1053
6J20
A
D9IEF7
UNP
97
278
2
anti-parallel
A
SER
169
A
SER
168
A
THR
173
A
THR
172
A
VAL
178
A
VAL
177
A
ILE
182
A
ILE
181
binding site for residue GBQ A 1201
A
GBQ
1201
Software
16
A
ASN
89
A
ASN
88
16
1_555
A
ASN
109
A
ASN
108
16
1_555
A
PRO
112
A
PRO
111
16
1_555
A
ILE
113
A
ILE
112
16
1_555
A
VAL
116
A
VAL
115
16
1_555
A
GLN
165
A
GLN
164
16
1_555
A
ILE
182
A
ILE
181
16
1_555
A
TRP
184
A
TRP
183
16
1_555
A
GLU
193
A
GLU
192
16
1_555
A
HIS
197
A
HIS
196
16
1_555
A
VAL
200
A
VAL
199
16
1_555
A
THR
201
A
THR
200
16
1_555
A
ILE
204
A
ILE
203
16
1_555
A
TRP
261
A
TRP
367
16
1_555
A
PHE
264
A
PHE
370
16
1_555
A
HIS
265
A
HIS
371
16
1_555
94
P 42 21 2