0.012223
0.000000
0.000000
0.000000
0.009419
0.000000
0.000000
0.000000
0.007152
0.000000
0.000000
0.000000
He, C.
Li, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
32
90.000
90.000
90.000
81.810
106.170
139.830
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H21 N2 O2 1
189.275
n
N-TRIMETHYLLYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
UK
Biochem.J.
BIJOAK
0043
1470-8728
476
1957
1973
10.1042/BCJ20190091
31253666
Structural basis for histone H3K4me3 recognition by the N-terminal domain of the PHD finger protein Spp1.
2019
0000-0002-6077-1267
100
1
N
CCD
2017-03-05
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.987
1.0
BL17U
SSRF
0.987
SYNCHROTRON
SSRF BEAMLINE BL17U
14246.196
COMPASS component SPP1
UNP residues 1-124
4
man
polymer
818.961
Histone H3
4
syn
polymer
65.409
ZINC ION
12
syn
non-polymer
Complex proteins associated with SET1 protein SPP1,Set1C component SPP1,Suppressor of PRP protein 1
no
no
SHNMSLPQWCPPHSTLKRNPTTGEDVYCICKRPDYGELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYCQAGITGKN
KNGEGSLPKTLWKRKCRISDCYKPCLQDSKYCSEEHGREFVND
SHNMSLPQWCPPHSTLKRNPTTGEDVYCICKRPDYGELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYCQAGITGKN
KNGEGSLPKTLWKRKCRISDCYKPCLQDSKYCSEEHGREFVND
A,B,C,D
polypeptide(L)
no
yes
ART(M3L)QTA
ARTKQTA
E,F,G,H
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
S288c
sample
1
123
SPP1
559292
Saccharomyces cerevisiae S288c
562
Escherichia coli
Biological sequence
1
2.52
51.18
VAPOR DIFFUSION, HANGING DROP
0.1 M ammonium sulfate, 20% PEG3350,
0.1 M HEPES ph 7.5
293
repository
Initial release
1
0
2019-09-11
N
PDBJ
Y
PDBJ
2019-01-02
REL
REL
ZN
ZINC ION
559292
Baker's yeast
Saccharomyces cerevisiae S288c
sample
1
7
ZN
18
3
ZN
ZN
201
A
ZN
19
3
ZN
ZN
202
A
ZN
20
3
ZN
ZN
203
A
ZN
15
3
ZN
ZN
201
B
ZN
16
3
ZN
ZN
202
B
ZN
17
3
ZN
ZN
203
B
ZN
13
3
ZN
ZN
201
C
ZN
14
3
ZN
ZN
202
C
ZN
22
3
ZN
ZN
203
C
ZN
11
3
ZN
ZN
201
D
ZN
12
3
ZN
ZN
202
D
ZN
21
3
ZN
ZN
203
D
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
n
6
3
A
n
7
4
A
n
8
5
A
n
9
6
A
n
10
7
A
n
11
8
A
n
12
9
A
n
13
10
A
n
14
11
A
n
15
12
A
n
16
13
A
n
17
14
A
n
18
15
A
n
19
16
A
n
20
17
A
n
21
18
A
THR
19
n
22
THR
19
A
GLY
20
n
23
GLY
20
A
GLU
21
n
24
GLU
21
A
ASP
22
n
25
ASP
22
A
VAL
23
n
26
VAL
23
A
TYR
24
n
27
TYR
24
A
CYS
25
n
28
CYS
25
A
ILE
26
n
29
ILE
26
A
CYS
27
n
30
CYS
27
A
LYS
28
n
31
LYS
28
A
ARG
29
n
32
ARG
29
A
PRO
30
n
33
PRO
30
A
ASP
31
n
34
ASP
31
A
TYR
32
n
35
TYR
32
A
GLY
33
n
36
GLY
33
A
GLU
34
n
37
GLU
34
A
LEU
35
n
38
LEU
35
A
MET
36
n
39
MET
36
A
VAL
37
n
40
VAL
37
A
GLY
38
n
41
GLY
38
A
CYS
39
n
42
CYS
39
A
ASP
40
n
43
ASP
40
A
GLY
41
n
44
GLY
41
A
CYS
42
n
45
CYS
42
A
ASP
43
n
46
ASP
43
A
ASP
44
n
47
ASP
44
A
TRP
45
n
48
TRP
45
A
PHE
46
n
49
PHE
46
A
HIS
47
n
50
HIS
47
A
PHE
48
n
51
PHE
48
A
THR
49
n
52
THR
49
A
CYS
50
n
53
CYS
50
A
LEU
51
n
54
LEU
51
A
HIS
52
n
55
HIS
52
A
ILE
53
n
56
ILE
53
A
PRO
54
n
57
PRO
54
A
GLU
55
n
58
GLU
55
A
GLN
56
n
59
GLN
56
A
PHE
57
n
60
PHE
57
A
LYS
58
n
61
LYS
58
A
ASP
59
n
62
ASP
59
A
LEU
60
n
63
LEU
60
A
VAL
61
n
64
VAL
61
A
PHE
62
n
65
PHE
62
A
SER
63
n
66
SER
63
A
PHE
64
n
67
PHE
64
A
TYR
65
n
68
TYR
65
A
CYS
66
n
69
CYS
66
A
PRO
67
n
70
PRO
67
A
TYR
68
n
71
TYR
68
A
CYS
69
n
72
CYS
69
A
GLN
70
n
73
GLN
70
A
ALA
71
n
74
ALA
71
A
GLY
72
n
75
GLY
72
A
ILE
73
n
76
ILE
73
A
THR
74
n
77
THR
74
A
GLY
75
n
78
GLY
75
A
LYS
76
n
79
LYS
76
A
ASN
77
n
80
ASN
77
A
LYS
78
n
81
LYS
78
A
n
82
79
A
n
83
80
A
n
84
81
A
GLY
82
n
85
GLY
82
A
SER
83
n
86
SER
83
A
LEU
84
n
87
LEU
84
A
PRO
85
n
88
PRO
85
A
LYS
86
n
89
LYS
86
A
THR
87
n
90
THR
87
A
LEU
88
n
91
LEU
88
A
TRP
89
n
92
TRP
89
A
LYS
90
n
93
LYS
90
A
ARG
91
n
94
ARG
91
A
LYS
92
n
95
LYS
92
A
CYS
93
n
96
CYS
93
A
ARG
94
n
97
ARG
94
A
ILE
95
n
98
ILE
95
A
SER
96
n
99
SER
96
A
ASP
97
n
100
ASP
97
A
CYS
98
n
101
CYS
98
A
TYR
99
n
102
TYR
99
A
LYS
100
n
103
LYS
100
A
PRO
101
n
104
PRO
101
A
CYS
102
n
105
CYS
102
A
LEU
103
n
106
LEU
103
A
GLN
104
n
107
GLN
104
A
ASP
105
n
108
ASP
105
A
SER
106
n
109
SER
106
A
LYS
107
n
110
LYS
107
A
TYR
108
n
111
TYR
108
A
CYS
109
n
112
CYS
109
A
SER
110
n
113
SER
110
A
GLU
111
n
114
GLU
111
A
GLU
112
n
115
GLU
112
A
HIS
113
n
116
HIS
113
A
GLY
114
n
117
GLY
114
A
ARG
115
n
118
ARG
115
A
GLU
116
n
119
GLU
116
A
PHE
117
n
120
PHE
117
A
VAL
118
n
121
VAL
118
A
ASN
119
n
122
ASN
119
A
n
123
120
A
n
1
-2
B
n
2
-1
B
n
3
0
B
n
4
1
B
n
5
2
B
n
6
3
B
n
7
4
B
n
8
5
B
n
9
6
B
n
10
7
B
n
11
8
B
n
12
9
B
n
13
10
B
n
14
11
B
n
15
12
B
n
16
13
B
n
17
14
B
n
18
15
B
n
19
16
B
n
20
17
B
n
21
18
B
n
22
19
B
n
23
20
B
GLU
21
n
24
GLU
21
B
ASP
22
n
25
ASP
22
B
VAL
23
n
26
VAL
23
B
TYR
24
n
27
TYR
24
B
CYS
25
n
28
CYS
25
B
ILE
26
n
29
ILE
26
B
CYS
27
n
30
CYS
27
B
LYS
28
n
31
LYS
28
B
ARG
29
n
32
ARG
29
B
PRO
30
n
33
PRO
30
B
ASP
31
n
34
ASP
31
B
TYR
32
n
35
TYR
32
B
GLY
33
n
36
GLY
33
B
GLU
34
n
37
GLU
34
B
LEU
35
n
38
LEU
35
B
MET
36
n
39
MET
36
B
VAL
37
n
40
VAL
37
B
GLY
38
n
41
GLY
38
B
CYS
39
n
42
CYS
39
B
ASP
40
n
43
ASP
40
B
GLY
41
n
44
GLY
41
B
CYS
42
n
45
CYS
42
B
ASP
43
n
46
ASP
43
B
ASP
44
n
47
ASP
44
B
TRP
45
n
48
TRP
45
B
PHE
46
n
49
PHE
46
B
HIS
47
n
50
HIS
47
B
PHE
48
n
51
PHE
48
B
THR
49
n
52
THR
49
B
CYS
50
n
53
CYS
50
B
LEU
51
n
54
LEU
51
B
HIS
52
n
55
HIS
52
B
ILE
53
n
56
ILE
53
B
PRO
54
n
57
PRO
54
B
GLU
55
n
58
GLU
55
B
GLN
56
n
59
GLN
56
B
PHE
57
n
60
PHE
57
B
LYS
58
n
61
LYS
58
B
ASP
59
n
62
ASP
59
B
LEU
60
n
63
LEU
60
B
VAL
61
n
64
VAL
61
B
PHE
62
n
65
PHE
62
B
SER
63
n
66
SER
63
B
PHE
64
n
67
PHE
64
B
TYR
65
n
68
TYR
65
B
CYS
66
n
69
CYS
66
B
PRO
67
n
70
PRO
67
B
TYR
68
n
71
TYR
68
B
CYS
69
n
72
CYS
69
B
GLN
70
n
73
GLN
70
B
ALA
71
n
74
ALA
71
B
GLY
72
n
75
GLY
72
B
ILE
73
n
76
ILE
73
B
THR
74
n
77
THR
74
B
GLY
75
n
78
GLY
75
B
LYS
76
n
79
LYS
76
B
n
80
77
B
n
81
78
B
n
82
79
B
n
83
80
B
GLU
81
n
84
GLU
81
B
GLY
82
n
85
GLY
82
B
SER
83
n
86
SER
83
B
LEU
84
n
87
LEU
84
B
PRO
85
n
88
PRO
85
B
LYS
86
n
89
LYS
86
B
THR
87
n
90
THR
87
B
LEU
88
n
91
LEU
88
B
TRP
89
n
92
TRP
89
B
LYS
90
n
93
LYS
90
B
ARG
91
n
94
ARG
91
B
LYS
92
n
95
LYS
92
B
CYS
93
n
96
CYS
93
B
ARG
94
n
97
ARG
94
B
ILE
95
n
98
ILE
95
B
SER
96
n
99
SER
96
B
ASP
97
n
100
ASP
97
B
CYS
98
n
101
CYS
98
B
TYR
99
n
102
TYR
99
B
LYS
100
n
103
LYS
100
B
PRO
101
n
104
PRO
101
B
CYS
102
n
105
CYS
102
B
LEU
103
n
106
LEU
103
B
GLN
104
n
107
GLN
104
B
ASP
105
n
108
ASP
105
B
SER
106
n
109
SER
106
B
LYS
107
n
110
LYS
107
B
TYR
108
n
111
TYR
108
B
CYS
109
n
112
CYS
109
B
SER
110
n
113
SER
110
B
GLU
111
n
114
GLU
111
B
GLU
112
n
115
GLU
112
B
HIS
113
n
116
HIS
113
B
GLY
114
n
117
GLY
114
B
ARG
115
n
118
ARG
115
B
GLU
116
n
119
GLU
116
B
PHE
117
n
120
PHE
117
B
n
121
118
B
n
122
119
B
n
123
120
B
n
1
-2
C
n
2
-1
C
n
3
0
C
n
4
1
C
n
5
2
C
n
6
3
C
n
7
4
C
n
8
5
C
n
9
6
C
n
10
7
C
n
11
8
C
n
12
9
C
n
13
10
C
n
14
11
C
n
15
12
C
n
16
13
C
n
17
14
C
n
18
15
C
n
19
16
C
n
20
17
C
n
21
18
C
n
22
19
C
n
23
20
C
GLU
21
n
24
GLU
21
C
ASP
22
n
25
ASP
22
C
VAL
23
n
26
VAL
23
C
TYR
24
n
27
TYR
24
C
CYS
25
n
28
CYS
25
C
ILE
26
n
29
ILE
26
C
CYS
27
n
30
CYS
27
C
LYS
28
n
31
LYS
28
C
ARG
29
n
32
ARG
29
C
PRO
30
n
33
PRO
30
C
ASP
31
n
34
ASP
31
C
TYR
32
n
35
TYR
32
C
GLY
33
n
36
GLY
33
C
GLU
34
n
37
GLU
34
C
LEU
35
n
38
LEU
35
C
MET
36
n
39
MET
36
C
VAL
37
n
40
VAL
37
C
GLY
38
n
41
GLY
38
C
CYS
39
n
42
CYS
39
C
ASP
40
n
43
ASP
40
C
GLY
41
n
44
GLY
41
C
CYS
42
n
45
CYS
42
C
ASP
43
n
46
ASP
43
C
ASP
44
n
47
ASP
44
C
TRP
45
n
48
TRP
45
C
PHE
46
n
49
PHE
46
C
HIS
47
n
50
HIS
47
C
PHE
48
n
51
PHE
48
C
THR
49
n
52
THR
49
C
CYS
50
n
53
CYS
50
C
LEU
51
n
54
LEU
51
C
HIS
52
n
55
HIS
52
C
ILE
53
n
56
ILE
53
C
PRO
54
n
57
PRO
54
C
GLU
55
n
58
GLU
55
C
GLN
56
n
59
GLN
56
C
PHE
57
n
60
PHE
57
C
LYS
58
n
61
LYS
58
C
ASP
59
n
62
ASP
59
C
LEU
60
n
63
LEU
60
C
VAL
61
n
64
VAL
61
C
PHE
62
n
65
PHE
62
C
SER
63
n
66
SER
63
C
PHE
64
n
67
PHE
64
C
TYR
65
n
68
TYR
65
C
CYS
66
n
69
CYS
66
C
PRO
67
n
70
PRO
67
C
TYR
68
n
71
TYR
68
C
CYS
69
n
72
CYS
69
C
GLN
70
n
73
GLN
70
C
ALA
71
n
74
ALA
71
C
GLY
72
n
75
GLY
72
C
ILE
73
n
76
ILE
73
C
THR
74
n
77
THR
74
C
GLY
75
n
78
GLY
75
C
LYS
76
n
79
LYS
76
C
n
80
77
C
n
81
78
C
n
82
79
C
n
83
80
C
n
84
81
C
GLY
82
n
85
GLY
82
C
SER
83
n
86
SER
83
C
LEU
84
n
87
LEU
84
C
PRO
85
n
88
PRO
85
C
LYS
86
n
89
LYS
86
C
THR
87
n
90
THR
87
C
LEU
88
n
91
LEU
88
C
TRP
89
n
92
TRP
89
C
LYS
90
n
93
LYS
90
C
ARG
91
n
94
ARG
91
C
LYS
92
n
95
LYS
92
C
CYS
93
n
96
CYS
93
C
ARG
94
n
97
ARG
94
C
ILE
95
n
98
ILE
95
C
SER
96
n
99
SER
96
C
ASP
97
n
100
ASP
97
C
CYS
98
n
101
CYS
98
C
TYR
99
n
102
TYR
99
C
LYS
100
n
103
LYS
100
C
PRO
101
n
104
PRO
101
C
CYS
102
n
105
CYS
102
C
LEU
103
n
106
LEU
103
C
GLN
104
n
107
GLN
104
C
ASP
105
n
108
ASP
105
C
SER
106
n
109
SER
106
C
LYS
107
n
110
LYS
107
C
TYR
108
n
111
TYR
108
C
CYS
109
n
112
CYS
109
C
SER
110
n
113
SER
110
C
GLU
111
n
114
GLU
111
C
GLU
112
n
115
GLU
112
C
HIS
113
n
116
HIS
113
C
GLY
114
n
117
GLY
114
C
ARG
115
n
118
ARG
115
C
n
119
116
C
n
120
117
C
n
121
118
C
n
122
119
C
n
123
120
C
n
1
-2
D
n
2
-1
D
n
3
0
D
n
4
1
D
n
5
2
D
n
6
3
D
n
7
4
D
n
8
5
D
n
9
6
D
n
10
7
D
n
11
8
D
n
12
9
D
n
13
10
D
n
14
11
D
n
15
12
D
n
16
13
D
n
17
14
D
n
18
15
D
n
19
16
D
n
20
17
D
n
21
18
D
n
22
19
D
GLY
20
n
23
GLY
20
D
GLU
21
n
24
GLU
21
D
ASP
22
n
25
ASP
22
D
VAL
23
n
26
VAL
23
D
TYR
24
n
27
TYR
24
D
CYS
25
n
28
CYS
25
D
ILE
26
n
29
ILE
26
D
CYS
27
n
30
CYS
27
D
LYS
28
n
31
LYS
28
D
ARG
29
n
32
ARG
29
D
PRO
30
n
33
PRO
30
D
ASP
31
n
34
ASP
31
D
TYR
32
n
35
TYR
32
D
GLY
33
n
36
GLY
33
D
GLU
34
n
37
GLU
34
D
LEU
35
n
38
LEU
35
D
MET
36
n
39
MET
36
D
VAL
37
n
40
VAL
37
D
GLY
38
n
41
GLY
38
D
CYS
39
n
42
CYS
39
D
ASP
40
n
43
ASP
40
D
GLY
41
n
44
GLY
41
D
CYS
42
n
45
CYS
42
D
ASP
43
n
46
ASP
43
D
ASP
44
n
47
ASP
44
D
TRP
45
n
48
TRP
45
D
PHE
46
n
49
PHE
46
D
HIS
47
n
50
HIS
47
D
PHE
48
n
51
PHE
48
D
THR
49
n
52
THR
49
D
CYS
50
n
53
CYS
50
D
LEU
51
n
54
LEU
51
D
HIS
52
n
55
HIS
52
D
ILE
53
n
56
ILE
53
D
PRO
54
n
57
PRO
54
D
GLU
55
n
58
GLU
55
D
GLN
56
n
59
GLN
56
D
PHE
57
n
60
PHE
57
D
LYS
58
n
61
LYS
58
D
ASP
59
n
62
ASP
59
D
LEU
60
n
63
LEU
60
D
VAL
61
n
64
VAL
61
D
PHE
62
n
65
PHE
62
D
SER
63
n
66
SER
63
D
PHE
64
n
67
PHE
64
D
TYR
65
n
68
TYR
65
D
CYS
66
n
69
CYS
66
D
PRO
67
n
70
PRO
67
D
TYR
68
n
71
TYR
68
D
CYS
69
n
72
CYS
69
D
GLN
70
n
73
GLN
70
D
ALA
71
n
74
ALA
71
D
GLY
72
n
75
GLY
72
D
ILE
73
n
76
ILE
73
D
THR
74
n
77
THR
74
D
GLY
75
n
78
GLY
75
D
LYS
76
n
79
LYS
76
D
n
80
77
D
n
81
78
D
n
82
79
D
n
83
80
D
GLU
81
n
84
GLU
81
D
GLY
82
n
85
GLY
82
D
SER
83
n
86
SER
83
D
LEU
84
n
87
LEU
84
D
PRO
85
n
88
PRO
85
D
LYS
86
n
89
LYS
86
D
THR
87
n
90
THR
87
D
LEU
88
n
91
LEU
88
D
TRP
89
n
92
TRP
89
D
LYS
90
n
93
LYS
90
D
ARG
91
n
94
ARG
91
D
LYS
92
n
95
LYS
92
D
CYS
93
n
96
CYS
93
D
ARG
94
n
97
ARG
94
D
ILE
95
n
98
ILE
95
D
SER
96
n
99
SER
96
D
ASP
97
n
100
ASP
97
D
CYS
98
n
101
CYS
98
D
TYR
99
n
102
TYR
99
D
LYS
100
n
103
LYS
100
D
PRO
101
n
104
PRO
101
D
CYS
102
n
105
CYS
102
D
LEU
103
n
106
LEU
103
D
GLN
104
n
107
GLN
104
D
ASP
105
n
108
ASP
105
D
SER
106
n
109
SER
106
D
LYS
107
n
110
LYS
107
D
TYR
108
n
111
TYR
108
D
CYS
109
n
112
CYS
109
D
SER
110
n
113
SER
110
D
GLU
111
n
114
GLU
111
D
GLU
112
n
115
GLU
112
D
HIS
113
n
116
HIS
113
D
GLY
114
n
117
GLY
114
D
ARG
115
n
118
ARG
115
D
n
119
116
D
n
120
117
D
n
121
118
D
n
122
119
D
n
123
120
D
ALA
1
n
1
ALA
1
E
ARG
2
n
2
ARG
2
E
THR
3
n
3
THR
3
E
M3L
4
n
4
M3L
4
E
GLN
5
n
5
GLN
5
E
THR
6
n
6
THR
6
E
ALA
7
n
7
ALA
7
E
ALA
1
n
1
ALA
1
F
ARG
2
n
2
ARG
2
F
THR
3
n
3
THR
3
F
M3L
4
n
4
M3L
4
F
GLN
5
n
5
GLN
5
F
THR
6
n
6
THR
6
F
n
7
7
F
ALA
1
n
1
ALA
1
G
ARG
2
n
2
ARG
2
G
THR
3
n
3
THR
3
G
M3L
4
n
4
M3L
4
G
GLN
5
n
5
GLN
5
G
THR
6
n
6
THR
6
G
n
7
7
G
ALA
1
n
1
ALA
1
H
ARG
2
n
2
ARG
2
H
THR
3
n
3
THR
3
H
M3L
4
n
4
M3L
4
H
GLN
5
n
5
GLN
5
H
THR
6
n
6
THR
6
H
n
7
7
H
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
gel filtration
1130
-7
7530
1080
-3
6960
940
-4
6570
1130
-42
6700
A
CYS
25
A
SG
CYS
28
1_555
A
ZN
203
K
ZN
ZN
1_555
A
CYS
27
A
SG
CYS
30
1_555
112.1
A
CYS
25
A
SG
CYS
28
1_555
A
ZN
203
K
ZN
ZN
1_555
A
HIS
47
A
ND1
HIS
50
1_555
113.6
A
CYS
27
A
SG
CYS
30
1_555
A
ZN
203
K
ZN
ZN
1_555
A
HIS
47
A
ND1
HIS
50
1_555
99.8
A
CYS
25
A
SG
CYS
28
1_555
A
ZN
203
K
ZN
ZN
1_555
A
CYS
50
A
SG
CYS
53
1_555
106.2
A
CYS
27
A
SG
CYS
30
1_555
A
ZN
203
K
ZN
ZN
1_555
A
CYS
50
A
SG
CYS
53
1_555
106.9
A
HIS
47
A
ND1
HIS
50
1_555
A
ZN
203
K
ZN
ZN
1_555
A
CYS
50
A
SG
CYS
53
1_555
118.0
A
CYS
39
A
SG
CYS
42
1_555
A
ZN
201
I
ZN
ZN
1_555
A
CYS
42
A
SG
CYS
45
1_555
120.2
A
CYS
39
A
SG
CYS
42
1_555
A
ZN
201
I
ZN
ZN
1_555
A
CYS
66
A
SG
CYS
69
1_555
102.7
A
CYS
42
A
SG
CYS
45
1_555
A
ZN
201
I
ZN
ZN
1_555
A
CYS
66
A
SG
CYS
69
1_555
121.8
A
CYS
39
A
SG
CYS
42
1_555
A
ZN
201
I
ZN
ZN
1_555
A
CYS
69
A
SG
CYS
72
1_555
101.7
A
CYS
42
A
SG
CYS
45
1_555
A
ZN
201
I
ZN
ZN
1_555
A
CYS
69
A
SG
CYS
72
1_555
110.3
A
CYS
66
A
SG
CYS
69
1_555
A
ZN
201
I
ZN
ZN
1_555
A
CYS
69
A
SG
CYS
72
1_555
95.8
A
CYS
93
A
SG
CYS
96
1_555
A
ZN
202
J
ZN
ZN
1_555
A
CYS
98
A
SG
CYS
101
1_555
123.1
A
CYS
93
A
SG
CYS
96
1_555
A
ZN
202
J
ZN
ZN
1_555
A
CYS
109
A
SG
CYS
112
1_555
120.6
A
CYS
98
A
SG
CYS
101
1_555
A
ZN
202
J
ZN
ZN
1_555
A
CYS
109
A
SG
CYS
112
1_555
93.5
A
CYS
93
A
SG
CYS
96
1_555
A
ZN
202
J
ZN
ZN
1_555
A
HIS
113
A
ND1
HIS
116
1_555
104.9
A
CYS
98
A
SG
CYS
101
1_555
A
ZN
202
J
ZN
ZN
1_555
A
HIS
113
A
ND1
HIS
116
1_555
100.5
A
CYS
109
A
SG
CYS
112
1_555
A
ZN
202
J
ZN
ZN
1_555
A
HIS
113
A
ND1
HIS
116
1_555
112.9
B
CYS
25
B
SG
CYS
28
1_555
B
ZN
201
L
ZN
ZN
1_555
B
CYS
27
B
SG
CYS
30
1_555
114.8
B
CYS
25
B
SG
CYS
28
1_555
B
ZN
201
L
ZN
ZN
1_555
B
HIS
47
B
ND1
HIS
50
1_555
97.2
B
CYS
27
B
SG
CYS
30
1_555
B
ZN
201
L
ZN
ZN
1_555
B
HIS
47
B
ND1
HIS
50
1_555
96.3
B
CYS
25
B
SG
CYS
28
1_555
B
ZN
201
L
ZN
ZN
1_555
B
CYS
50
B
SG
CYS
53
1_555
127.9
B
CYS
27
B
SG
CYS
30
1_555
B
ZN
201
L
ZN
ZN
1_555
B
CYS
50
B
SG
CYS
53
1_555
105.0
B
HIS
47
B
ND1
HIS
50
1_555
B
ZN
201
L
ZN
ZN
1_555
B
CYS
50
B
SG
CYS
53
1_555
110.9
B
CYS
39
B
SG
CYS
42
1_555
B
ZN
202
M
ZN
ZN
1_555
B
CYS
42
B
SG
CYS
45
1_555
113.7
B
CYS
39
B
SG
CYS
42
1_555
B
ZN
202
M
ZN
ZN
1_555
B
CYS
66
B
SG
CYS
69
1_555
104.0
B
CYS
42
B
SG
CYS
45
1_555
B
ZN
202
M
ZN
ZN
1_555
B
CYS
66
B
SG
CYS
69
1_555
111.7
B
CYS
39
B
SG
CYS
42
1_555
B
ZN
202
M
ZN
ZN
1_555
B
CYS
69
B
SG
CYS
72
1_555
109.2
B
CYS
42
B
SG
CYS
45
1_555
B
ZN
202
M
ZN
ZN
1_555
B
CYS
69
B
SG
CYS
72
1_555
114.6
B
CYS
66
B
SG
CYS
69
1_555
B
ZN
202
M
ZN
ZN
1_555
B
CYS
69
B
SG
CYS
72
1_555
102.6
B
CYS
93
B
SG
CYS
96
1_555
B
ZN
203
N
ZN
ZN
1_555
B
CYS
98
B
SG
CYS
101
1_555
117.3
B
CYS
93
B
SG
CYS
96
1_555
B
ZN
203
N
ZN
ZN
1_555
B
CYS
109
B
SG
CYS
112
1_555
119.5
B
CYS
98
B
SG
CYS
101
1_555
B
ZN
203
N
ZN
ZN
1_555
B
CYS
109
B
SG
CYS
112
1_555
102.6
B
CYS
93
B
SG
CYS
96
1_555
B
ZN
203
N
ZN
ZN
1_555
B
HIS
113
B
ND1
HIS
116
1_555
113.6
B
CYS
98
B
SG
CYS
101
1_555
B
ZN
203
N
ZN
ZN
1_555
B
HIS
113
B
ND1
HIS
116
1_555
99.8
B
CYS
109
B
SG
CYS
112
1_555
B
ZN
203
N
ZN
ZN
1_555
B
HIS
113
B
ND1
HIS
116
1_555
101.1
C
CYS
25
C
SG
CYS
28
1_555
C
ZN
201
O
ZN
ZN
1_555
C
CYS
27
C
SG
CYS
30
1_555
99.9
C
CYS
25
C
SG
CYS
28
1_555
C
ZN
201
O
ZN
ZN
1_555
C
HIS
47
C
ND1
HIS
50
1_555
94.2
C
CYS
27
C
SG
CYS
30
1_555
C
ZN
201
O
ZN
ZN
1_555
C
HIS
47
C
ND1
HIS
50
1_555
86.3
C
CYS
25
C
SG
CYS
28
1_555
C
ZN
201
O
ZN
ZN
1_555
C
CYS
50
C
SG
CYS
53
1_555
111.9
C
CYS
27
C
SG
CYS
30
1_555
C
ZN
201
O
ZN
ZN
1_555
C
CYS
50
C
SG
CYS
53
1_555
134.9
C
HIS
47
C
ND1
HIS
50
1_555
C
ZN
201
O
ZN
ZN
1_555
C
CYS
50
C
SG
CYS
53
1_555
120.8
C
CYS
39
C
SG
CYS
42
1_555
C
ZN
202
P
ZN
ZN
1_555
C
CYS
42
C
SG
CYS
45
1_555
98.4
C
CYS
39
C
SG
CYS
42
1_555
C
ZN
202
P
ZN
ZN
1_555
C
CYS
66
C
SG
CYS
69
1_555
113.0
C
CYS
42
C
SG
CYS
45
1_555
C
ZN
202
P
ZN
ZN
1_555
C
CYS
66
C
SG
CYS
69
1_555
129.4
C
CYS
39
C
SG
CYS
42
1_555
C
ZN
202
P
ZN
ZN
1_555
C
CYS
69
C
SG
CYS
72
1_555
99.9
C
CYS
42
C
SG
CYS
45
1_555
C
ZN
202
P
ZN
ZN
1_555
C
CYS
69
C
SG
CYS
72
1_555
114.7
C
CYS
66
C
SG
CYS
69
1_555
C
ZN
202
P
ZN
ZN
1_555
C
CYS
69
C
SG
CYS
72
1_555
98.3
C
CYS
93
C
SG
CYS
96
1_555
C
ZN
203
Q
ZN
ZN
1_555
C
CYS
98
C
SG
CYS
101
1_555
115.8
C
CYS
93
C
SG
CYS
96
1_555
C
ZN
203
Q
ZN
ZN
1_555
C
CYS
109
C
SG
CYS
112
1_555
117.2
C
CYS
98
C
SG
CYS
101
1_555
C
ZN
203
Q
ZN
ZN
1_555
C
CYS
109
C
SG
CYS
112
1_555
94.4
C
CYS
93
C
SG
CYS
96
1_555
C
ZN
203
Q
ZN
ZN
1_555
C
HIS
113
C
ND1
HIS
116
1_555
114.2
C
CYS
98
C
SG
CYS
101
1_555
C
ZN
203
Q
ZN
ZN
1_555
C
HIS
113
C
ND1
HIS
116
1_555
105.2
C
CYS
109
C
SG
CYS
112
1_555
C
ZN
203
Q
ZN
ZN
1_555
C
HIS
113
C
ND1
HIS
116
1_555
107.8
D
CYS
25
D
SG
CYS
28
1_555
D
ZN
201
R
ZN
ZN
1_555
D
CYS
27
D
SG
CYS
30
1_555
123.3
D
CYS
25
D
SG
CYS
28
1_555
D
ZN
201
R
ZN
ZN
1_555
D
HIS
47
D
ND1
HIS
50
1_555
115.4
D
CYS
27
D
SG
CYS
30
1_555
D
ZN
201
R
ZN
ZN
1_555
D
HIS
47
D
ND1
HIS
50
1_555
94.2
D
CYS
25
D
SG
CYS
28
1_555
D
ZN
201
R
ZN
ZN
1_555
D
CYS
50
D
SG
CYS
53
1_555
109.5
D
CYS
27
D
SG
CYS
30
1_555
D
ZN
201
R
ZN
ZN
1_555
D
CYS
50
D
SG
CYS
53
1_555
107.3
D
HIS
47
D
ND1
HIS
50
1_555
D
ZN
201
R
ZN
ZN
1_555
D
CYS
50
D
SG
CYS
53
1_555
105.0
D
CYS
39
D
SG
CYS
42
1_555
D
ZN
202
S
ZN
ZN
1_555
D
CYS
42
D
SG
CYS
45
1_555
129.3
D
CYS
39
D
SG
CYS
42
1_555
D
ZN
202
S
ZN
ZN
1_555
D
CYS
66
D
SG
CYS
69
1_555
103.6
D
CYS
42
D
SG
CYS
45
1_555
D
ZN
202
S
ZN
ZN
1_555
D
CYS
66
D
SG
CYS
69
1_555
117.5
D
CYS
39
D
SG
CYS
42
1_555
D
ZN
202
S
ZN
ZN
1_555
D
CYS
69
D
SG
CYS
72
1_555
98.9
D
CYS
42
D
SG
CYS
45
1_555
D
ZN
202
S
ZN
ZN
1_555
D
CYS
69
D
SG
CYS
72
1_555
103.0
D
CYS
66
D
SG
CYS
69
1_555
D
ZN
202
S
ZN
ZN
1_555
D
CYS
69
D
SG
CYS
72
1_555
98.3
D
CYS
93
D
SG
CYS
96
1_555
D
ZN
203
T
ZN
ZN
1_555
D
CYS
98
D
SG
CYS
101
1_555
136.3
D
CYS
93
D
SG
CYS
96
1_555
D
ZN
203
T
ZN
ZN
1_555
D
CYS
109
D
SG
CYS
112
1_555
122.9
D
CYS
98
D
SG
CYS
101
1_555
D
ZN
203
T
ZN
ZN
1_555
D
CYS
109
D
SG
CYS
112
1_555
86.7
E
M3L
4
modified residue
E
M3L
4
LYS
F
M3L
4
modified residue
F
M3L
4
LYS
G
M3L
4
modified residue
G
M3L
4
LYS
H
M3L
4
modified residue
H
M3L
4
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
46
A
O
PHE
49
A
N
VAL
37
A
N
VAL
40
A
N
MET
36
A
N
MET
39
E
O
M3L
4
E
O
M3L
4
A
N
SER
63
A
N
SER
66
A
O
LEU
88
A
O
LEU
91
B
O
PHE
46
B
O
PHE
49
B
N
VAL
37
B
N
VAL
40
B
N
MET
36
B
N
MET
39
F
O
M3L
4
F
O
M3L
4
B
N
SER
63
B
N
SER
66
B
O
LEU
88
B
O
LEU
91
C
N
VAL
37
C
N
VAL
40
C
O
PHE
46
C
O
PHE
49
C
N
SER
63
C
N
SER
66
C
O
LEU
88
C
O
LEU
91
D
O
PHE
46
D
O
PHE
49
D
N
VAL
37
D
N
VAL
40
D
N
MET
36
D
N
MET
39
G
O
M3L
4
G
O
M3L
4
D
N
PHE
62
D
N
PHE
65
D
O
LEU
88
D
O
LEU
91
1
A
CG
LYS
76
A
CG
LYS
79
1
Y
1
A
CD
LYS
76
A
CD
LYS
79
1
Y
1
A
CE
LYS
76
A
CE
LYS
79
1
Y
1
A
NZ
LYS
76
A
NZ
LYS
79
1
Y
1
B
CG
GLU
81
B
CG
GLU
84
1
Y
1
B
CD
GLU
81
B
CD
GLU
84
1
Y
1
B
OE1
GLU
81
B
OE1
GLU
84
1
Y
1
B
OE2
GLU
81
B
OE2
GLU
84
1
Y
1
B
CG
ARG
94
B
CG
ARG
97
1
Y
1
B
CD
ARG
94
B
CD
ARG
97
1
Y
1
B
NE
ARG
94
B
NE
ARG
97
1
Y
1
B
CZ
ARG
94
B
CZ
ARG
97
1
Y
1
B
NH1
ARG
94
B
NH1
ARG
97
1
Y
1
B
NH2
ARG
94
B
NH2
ARG
97
1
Y
1
B
CG
PHE
117
B
CG
PHE
120
1
Y
1
B
CD1
PHE
117
B
CD1
PHE
120
1
Y
1
B
CD2
PHE
117
B
CD2
PHE
120
1
Y
1
B
CE1
PHE
117
B
CE1
PHE
120
1
Y
1
B
CE2
PHE
117
B
CE2
PHE
120
1
Y
1
B
CZ
PHE
117
B
CZ
PHE
120
1
Y
1
C
CG
LYS
76
C
CG
LYS
79
1
Y
1
C
CD
LYS
76
C
CD
LYS
79
1
Y
1
C
CE
LYS
76
C
CE
LYS
79
1
Y
1
C
NZ
LYS
76
C
NZ
LYS
79
1
Y
1
C
CG
LEU
103
C
CG
LEU
106
1
Y
1
C
CD1
LEU
103
C
CD1
LEU
106
1
Y
1
C
CD2
LEU
103
C
CD2
LEU
106
1
Y
1
C
CG
LYS
107
C
CG
LYS
110
1
Y
1
C
CD
LYS
107
C
CD
LYS
110
1
Y
1
C
CE
LYS
107
C
CE
LYS
110
1
Y
1
C
NZ
LYS
107
C
NZ
LYS
110
1
Y
1
C
CG
ARG
115
C
CG
ARG
118
1
Y
1
C
CD
ARG
115
C
CD
ARG
118
1
Y
1
C
NE
ARG
115
C
NE
ARG
118
1
Y
1
C
CZ
ARG
115
C
CZ
ARG
118
1
Y
1
C
NH1
ARG
115
C
NH1
ARG
118
1
Y
1
C
NH2
ARG
115
C
NH2
ARG
118
1
Y
1
D
CG
LYS
58
D
CG
LYS
61
1
Y
1
D
CD
LYS
58
D
CD
LYS
61
1
Y
1
D
CE
LYS
58
D
CE
LYS
61
1
Y
1
D
NZ
LYS
58
D
NZ
LYS
61
1
Y
1
D
CG
GLU
81
D
CG
GLU
84
1
Y
1
D
CD
GLU
81
D
CD
GLU
84
1
Y
1
D
OE1
GLU
81
D
OE1
GLU
84
1
Y
1
D
OE2
GLU
81
D
OE2
GLU
84
1
Y
1
D
CG
ARG
91
D
CG
ARG
94
1
Y
1
D
CD
ARG
91
D
CD
ARG
94
1
Y
1
D
NE
ARG
91
D
NE
ARG
94
1
Y
1
D
CZ
ARG
91
D
CZ
ARG
94
1
Y
1
D
NH1
ARG
91
D
NH1
ARG
94
1
Y
1
D
NH2
ARG
91
D
NH2
ARG
94
1
Y
1
D
CG
ARG
94
D
CG
ARG
97
1
Y
1
D
CD
ARG
94
D
CD
ARG
97
1
Y
1
D
NE
ARG
94
D
NE
ARG
97
1
Y
1
D
CZ
ARG
94
D
CZ
ARG
97
1
Y
1
D
NH1
ARG
94
D
NH1
ARG
97
1
Y
1
D
NH2
ARG
94
D
NH2
ARG
97
1
Y
1
D
CG
LYS
100
D
CG
LYS
103
1
Y
1
D
CD
LYS
100
D
CD
LYS
103
1
Y
1
D
CE
LYS
100
D
CE
LYS
103
1
Y
1
D
NZ
LYS
100
D
NZ
LYS
103
1
Y
1
D
CG
ARG
115
D
CG
ARG
118
1
Y
1
D
CD
ARG
115
D
CD
ARG
118
1
Y
1
D
NE
ARG
115
D
NE
ARG
118
1
Y
1
D
CZ
ARG
115
D
CZ
ARG
118
1
Y
1
D
NH1
ARG
115
D
NH1
ARG
118
1
Y
1
D
NH2
ARG
115
D
NH2
ARG
118
1
Y
1
A
SER
-2
A
SER
1
1
Y
1
A
HIS
-1
A
HIS
2
1
Y
1
A
ASN
0
A
ASN
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
SER
2
A
SER
5
1
Y
1
A
LEU
3
A
LEU
6
1
Y
1
A
PRO
4
A
PRO
7
1
Y
1
A
GLN
5
A
GLN
8
1
Y
1
A
TRP
6
A
TRP
9
1
Y
1
A
CYS
7
A
CYS
10
1
Y
1
A
PRO
8
A
PRO
11
1
Y
1
A
PRO
9
A
PRO
12
1
Y
1
A
HIS
10
A
HIS
13
1
Y
1
A
SER
11
A
SER
14
1
Y
1
A
THR
12
A
THR
15
1
Y
1
A
LEU
13
A
LEU
16
1
Y
1
A
LYS
14
A
LYS
17
1
Y
1
A
ARG
15
A
ARG
18
1
Y
1
A
ASN
16
A
ASN
19
1
Y
1
A
PRO
17
A
PRO
20
1
Y
1
A
THR
18
A
THR
21
1
Y
1
A
ASN
79
A
ASN
82
1
Y
1
A
GLY
80
A
GLY
83
1
Y
1
A
GLU
81
A
GLU
84
1
Y
1
A
ASP
120
A
ASP
123
1
Y
1
B
SER
-2
B
SER
1
1
Y
1
B
HIS
-1
B
HIS
2
1
Y
1
B
ASN
0
B
ASN
3
1
Y
1
B
MET
1
B
MET
4
1
Y
1
B
SER
2
B
SER
5
1
Y
1
B
LEU
3
B
LEU
6
1
Y
1
B
PRO
4
B
PRO
7
1
Y
1
B
GLN
5
B
GLN
8
1
Y
1
B
TRP
6
B
TRP
9
1
Y
1
B
CYS
7
B
CYS
10
1
Y
1
B
PRO
8
B
PRO
11
1
Y
1
B
PRO
9
B
PRO
12
1
Y
1
B
HIS
10
B
HIS
13
1
Y
1
B
SER
11
B
SER
14
1
Y
1
B
THR
12
B
THR
15
1
Y
1
B
LEU
13
B
LEU
16
1
Y
1
B
LYS
14
B
LYS
17
1
Y
1
B
ARG
15
B
ARG
18
1
Y
1
B
ASN
16
B
ASN
19
1
Y
1
B
PRO
17
B
PRO
20
1
Y
1
B
THR
18
B
THR
21
1
Y
1
B
THR
19
B
THR
22
1
Y
1
B
GLY
20
B
GLY
23
1
Y
1
B
ASN
77
B
ASN
80
1
Y
1
B
LYS
78
B
LYS
81
1
Y
1
B
ASN
79
B
ASN
82
1
Y
1
B
GLY
80
B
GLY
83
1
Y
1
B
VAL
118
B
VAL
121
1
Y
1
B
ASN
119
B
ASN
122
1
Y
1
B
ASP
120
B
ASP
123
1
Y
1
C
SER
-2
C
SER
1
1
Y
1
C
HIS
-1
C
HIS
2
1
Y
1
C
ASN
0
C
ASN
3
1
Y
1
C
MET
1
C
MET
4
1
Y
1
C
SER
2
C
SER
5
1
Y
1
C
LEU
3
C
LEU
6
1
Y
1
C
PRO
4
C
PRO
7
1
Y
1
C
GLN
5
C
GLN
8
1
Y
1
C
TRP
6
C
TRP
9
1
Y
1
C
CYS
7
C
CYS
10
1
Y
1
C
PRO
8
C
PRO
11
1
Y
1
C
PRO
9
C
PRO
12
1
Y
1
C
HIS
10
C
HIS
13
1
Y
1
C
SER
11
C
SER
14
1
Y
1
C
THR
12
C
THR
15
1
Y
1
C
LEU
13
C
LEU
16
1
Y
1
C
LYS
14
C
LYS
17
1
Y
1
C
ARG
15
C
ARG
18
1
Y
1
C
ASN
16
C
ASN
19
1
Y
1
C
PRO
17
C
PRO
20
1
Y
1
C
THR
18
C
THR
21
1
Y
1
C
THR
19
C
THR
22
1
Y
1
C
GLY
20
C
GLY
23
1
Y
1
C
ASN
77
C
ASN
80
1
Y
1
C
LYS
78
C
LYS
81
1
Y
1
C
ASN
79
C
ASN
82
1
Y
1
C
GLY
80
C
GLY
83
1
Y
1
C
GLU
81
C
GLU
84
1
Y
1
C
GLU
116
C
GLU
119
1
Y
1
C
PHE
117
C
PHE
120
1
Y
1
C
VAL
118
C
VAL
121
1
Y
1
C
ASN
119
C
ASN
122
1
Y
1
C
ASP
120
C
ASP
123
1
Y
1
D
SER
-2
D
SER
1
1
Y
1
D
HIS
-1
D
HIS
2
1
Y
1
D
ASN
0
D
ASN
3
1
Y
1
D
MET
1
D
MET
4
1
Y
1
D
SER
2
D
SER
5
1
Y
1
D
LEU
3
D
LEU
6
1
Y
1
D
PRO
4
D
PRO
7
1
Y
1
D
GLN
5
D
GLN
8
1
Y
1
D
TRP
6
D
TRP
9
1
Y
1
D
CYS
7
D
CYS
10
1
Y
1
D
PRO
8
D
PRO
11
1
Y
1
D
PRO
9
D
PRO
12
1
Y
1
D
HIS
10
D
HIS
13
1
Y
1
D
SER
11
D
SER
14
1
Y
1
D
THR
12
D
THR
15
1
Y
1
D
LEU
13
D
LEU
16
1
Y
1
D
LYS
14
D
LYS
17
1
Y
1
D
ARG
15
D
ARG
18
1
Y
1
D
ASN
16
D
ASN
19
1
Y
1
D
PRO
17
D
PRO
20
1
Y
1
D
THR
18
D
THR
21
1
Y
1
D
THR
19
D
THR
22
1
Y
1
D
ASN
77
D
ASN
80
1
Y
1
D
LYS
78
D
LYS
81
1
Y
1
D
ASN
79
D
ASN
82
1
Y
1
D
GLY
80
D
GLY
83
1
Y
1
D
GLU
116
D
GLU
119
1
Y
1
D
PHE
117
D
PHE
120
1
Y
1
D
VAL
118
D
VAL
121
1
Y
1
D
ASN
119
D
ASN
122
1
Y
1
D
ASP
120
D
ASP
123
1
Y
1
F
ALA
7
F
ALA
7
1
Y
1
G
ALA
7
G
ALA
7
1
Y
1
H
ALA
7
H
ALA
7
1
Y
1
A
CYS
25
66.71
-179.46
1
A
ASP
43
-107.18
43.18
1
A
PHE
57
-79.87
36.65
1
A
THR
74
-141.60
15.94
1
A
LYS
76
-149.98
12.77
1
A
ASP
105
60.62
-55.99
1
B
CYS
25
65.45
-179.07
1
B
ASP
43
-104.83
47.28
1
B
PHE
57
-97.68
47.22
1
C
CYS
25
66.90
168.30
1
C
TYR
99
-107.32
54.14
1
C
LEU
103
-94.20
-157.48
1
C
SER
110
-163.85
-169.27
1
D
CYS
25
61.77
-177.69
1
D
PHE
57
-89.21
35.63
1
D
ASP
105
64.20
-47.55
1
F
GLN
5
-159.93
81.84
1
H
ARG
2
56.46
80.02
1
H
THR
3
-87.47
-95.90
1
H
M3L
4
58.28
97.89
169.470
78.3615
31.240
0.2878
0.2345
0.2372
2.8500
42.2790
726
13777
14503
5.0100
99.5600
0.4900
1
THROUGHOUT
1.350
SAD
30.8000
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
2.8500
42.2790
0
3183
68.19
12
0
3171
398
0.002
3252
0.574
4384
0.040
441
0.003
558
5.540
1909
0.4298
0.0000
0.3242
3.0700
134
2717
2851
5
100.0000
0.3390
0.0000
0.2998
3.3788
123
2751
2874
5
100.0000
0.3148
0.0000
0.2398
3.8675
154
2726
2880
5
100.0000
0.2739
0.0000
0.2069
4.8715
162
2748
2910
5
100.0000
0.2452
0.0000
0.2143
42.2836
153
2835
2988
5
99.0000
69.480
2.850
69.915
6J2P
14530
14530
0.056
0.132
0.119
1
5.400
8.800
77725
5.300
99.700
0.689
2.850
3.000
1.100
11497
2085
0.324
0.764
0.689
1
2.100
5.500
99.900
0.474
3.000
3.190
1.600
10949
1992
0.223
0.526
0.474
1
3.000
5.500
99.900
0.268
3.190
3.410
2.700
10187
1864
0.126
0.298
0.268
1
4.800
5.500
100.000
0.166
3.410
3.680
4.300
9388
1733
0.078
0.184
0.166
1
7.600
5.400
99.800
0.114
3.680
4.030
6.000
8628
1606
0.053
0.127
0.114
1
10.500
5.400
99.800
0.092
4.030
4.510
6.900
7792
1474
0.043
0.102
0.092
1
13.500
5.300
99.600
0.099
4.510
5.200
6.200
6494
1295
0.046
0.110
0.099
1
14.300
5.000
99.700
0.089
5.200
6.370
6.700
5500
1107
0.042
0.098
0.089
1
14.500
5.000
99.700
0.055
6.370
9.010
12.500
4844
880
0.025
0.060
0.055
1
16.900
5.500
99.900
0.042
9.010
46.610
16.200
2446
494
0.020
0.047
0.042
1
18.700
5.000
95.000
refinement
PHENIX
1.11.1_2575
data scaling
SCALA
3.3.22
data extraction
PDB_EXTRACT
3.24
data reduction
iMOSFLM
phasing
PHENIX
N
COMPASS component SPP1, Histone H3
Crystal structure of Saccharomyces cerevisiae Spp1 in complex with H3K4me3
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
PHE
48
A
PHE
51
HELX_P
A
HIS
52
A
HIS
55
1
AA1
5
A
PRO
54
A
PRO
57
HELX_P
A
LYS
58
A
LYS
61
5
AA2
5
A
CYS
66
A
CYS
69
HELX_P
A
ALA
71
A
ALA
74
1
AA3
6
A
SER
110
A
SER
113
HELX_P
A
GLY
114
A
GLY
117
5
AA4
5
B
THR
49
B
THR
52
HELX_P
B
HIS
52
B
HIS
55
5
AA5
4
B
PRO
54
B
PRO
57
HELX_P
B
LYS
58
B
LYS
61
5
AA6
5
B
SER
110
B
SER
113
HELX_P
B
ARG
115
B
ARG
118
1
AA7
6
C
PRO
54
C
PRO
57
HELX_P
C
ASP
59
C
ASP
62
5
AA8
6
C
CYS
66
C
CYS
69
HELX_P
C
ALA
71
C
ALA
74
1
AA9
6
D
PRO
54
D
PRO
57
HELX_P
D
LYS
58
D
LYS
61
5
AB1
5
D
CYS
66
D
CYS
69
HELX_P
D
ALA
71
D
ALA
74
1
AB2
6
metalc
2.442
A
CYS
25
A
SG
CYS
28
1_555
A
ZN
203
K
ZN
ZN
1_555
metalc
2.333
A
CYS
27
A
SG
CYS
30
1_555
A
ZN
203
K
ZN
ZN
1_555
metalc
2.394
A
CYS
39
A
SG
CYS
42
1_555
A
ZN
201
I
ZN
ZN
1_555
metalc
2.387
A
CYS
42
A
SG
CYS
45
1_555
A
ZN
201
I
ZN
ZN
1_555
metalc
2.075
A
HIS
47
A
ND1
HIS
50
1_555
A
ZN
203
K
ZN
ZN
1_555
metalc
2.364
A
CYS
50
A
SG
CYS
53
1_555
A
ZN
203
K
ZN
ZN
1_555
metalc
2.538
A
CYS
66
A
SG
CYS
69
1_555
A
ZN
201
I
ZN
ZN
1_555
metalc
2.358
A
CYS
69
A
SG
CYS
72
1_555
A
ZN
201
I
ZN
ZN
1_555
metalc
2.541
A
CYS
93
A
SG
CYS
96
1_555
A
ZN
202
J
ZN
ZN
1_555
metalc
2.468
A
CYS
98
A
SG
CYS
101
1_555
A
ZN
202
J
ZN
ZN
1_555
metalc
2.355
A
CYS
109
A
SG
CYS
112
1_555
A
ZN
202
J
ZN
ZN
1_555
metalc
2.623
A
HIS
113
A
ND1
HIS
116
1_555
A
ZN
202
J
ZN
ZN
1_555
metalc
2.453
B
CYS
25
B
SG
CYS
28
1_555
B
ZN
201
L
ZN
ZN
1_555
metalc
2.342
B
CYS
27
B
SG
CYS
30
1_555
B
ZN
201
L
ZN
ZN
1_555
metalc
2.432
B
CYS
39
B
SG
CYS
42
1_555
B
ZN
202
M
ZN
ZN
1_555
metalc
2.303
B
CYS
42
B
SG
CYS
45
1_555
B
ZN
202
M
ZN
ZN
1_555
metalc
2.328
B
HIS
47
B
ND1
HIS
50
1_555
B
ZN
201
L
ZN
ZN
1_555
metalc
2.496
B
CYS
50
B
SG
CYS
53
1_555
B
ZN
201
L
ZN
ZN
1_555
metalc
2.360
B
CYS
66
B
SG
CYS
69
1_555
B
ZN
202
M
ZN
ZN
1_555
metalc
2.344
B
CYS
69
B
SG
CYS
72
1_555
B
ZN
202
M
ZN
ZN
1_555
metalc
2.562
B
CYS
93
B
SG
CYS
96
1_555
B
ZN
203
N
ZN
ZN
1_555
metalc
2.505
B
CYS
98
B
SG
CYS
101
1_555
B
ZN
203
N
ZN
ZN
1_555
metalc
2.327
B
CYS
109
B
SG
CYS
112
1_555
B
ZN
203
N
ZN
ZN
1_555
metalc
2.097
B
HIS
113
B
ND1
HIS
116
1_555
B
ZN
203
N
ZN
ZN
1_555
metalc
2.508
C
CYS
25
C
SG
CYS
28
1_555
C
ZN
201
O
ZN
ZN
1_555
metalc
2.497
C
CYS
27
C
SG
CYS
30
1_555
C
ZN
201
O
ZN
ZN
1_555
metalc
2.472
C
CYS
39
C
SG
CYS
42
1_555
C
ZN
202
P
ZN
ZN
1_555
metalc
2.386
C
CYS
42
C
SG
CYS
45
1_555
C
ZN
202
P
ZN
ZN
1_555
metalc
2.211
C
HIS
47
C
ND1
HIS
50
1_555
C
ZN
201
O
ZN
ZN
1_555
metalc
2.370
C
CYS
50
C
SG
CYS
53
1_555
C
ZN
201
O
ZN
ZN
1_555
metalc
2.541
C
CYS
66
C
SG
CYS
69
1_555
C
ZN
202
P
ZN
ZN
1_555
metalc
2.321
C
CYS
69
C
SG
CYS
72
1_555
C
ZN
202
P
ZN
ZN
1_555
metalc
2.401
C
CYS
93
C
SG
CYS
96
1_555
C
ZN
203
Q
ZN
ZN
1_555
metalc
2.438
C
CYS
98
C
SG
CYS
101
1_555
C
ZN
203
Q
ZN
ZN
1_555
metalc
2.484
C
CYS
109
C
SG
CYS
112
1_555
C
ZN
203
Q
ZN
ZN
1_555
metalc
2.540
C
HIS
113
C
ND1
HIS
116
1_555
C
ZN
203
Q
ZN
ZN
1_555
metalc
2.449
D
CYS
25
D
SG
CYS
28
1_555
D
ZN
201
R
ZN
ZN
1_555
metalc
2.360
D
CYS
27
D
SG
CYS
30
1_555
D
ZN
201
R
ZN
ZN
1_555
metalc
2.321
D
CYS
39
D
SG
CYS
42
1_555
D
ZN
202
S
ZN
ZN
1_555
metalc
2.607
D
CYS
42
D
SG
CYS
45
1_555
D
ZN
202
S
ZN
ZN
1_555
metalc
2.065
D
HIS
47
D
ND1
HIS
50
1_555
D
ZN
201
R
ZN
ZN
1_555
metalc
2.350
D
CYS
50
D
SG
CYS
53
1_555
D
ZN
201
R
ZN
ZN
1_555
metalc
2.367
D
CYS
66
D
SG
CYS
69
1_555
D
ZN
202
S
ZN
ZN
1_555
metalc
2.438
D
CYS
69
D
SG
CYS
72
1_555
D
ZN
202
S
ZN
ZN
1_555
metalc
2.468
D
CYS
93
D
SG
CYS
96
1_555
D
ZN
203
T
ZN
ZN
1_555
metalc
2.555
D
CYS
98
D
SG
CYS
101
1_555
D
ZN
203
T
ZN
ZN
1_555
metalc
2.589
D
CYS
109
D
SG
CYS
112
1_555
D
ZN
203
T
ZN
ZN
1_555
covale
1.329
both
E
THR
3
E
C
THR
3
1_555
E
M3L
4
E
N
M3L
4
1_555
covale
1.329
both
E
M3L
4
E
C
M3L
4
1_555
E
GLN
5
E
N
GLN
5
1_555
covale
1.329
both
F
THR
3
F
C
THR
3
1_555
F
M3L
4
F
N
M3L
4
1_555
covale
1.330
both
F
M3L
4
F
C
M3L
4
1_555
F
GLN
5
F
N
GLN
5
1_555
covale
1.330
both
G
THR
3
G
C
THR
3
1_555
G
M3L
4
G
N
M3L
4
1_555
covale
1.331
both
G
M3L
4
G
C
M3L
4
1_555
G
GLN
5
G
N
GLN
5
1_555
covale
1.333
both
H
THR
3
H
C
THR
3
1_555
H
M3L
4
H
N
M3L
4
1_555
covale
1.330
both
H
M3L
4
H
C
M3L
4
1_555
H
GLN
5
H
N
GLN
5
1_555
PROTEIN BINDING
Histone modification recognition, PROTEIN BINDING
SPP1_YEAST
UNP
1
1
Q03012
MSLPQWCPPHSTLKRNPTTGEDVYCICKRPDYGELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYCQAGITGKNKDA
IINGEGSLPKTLWKRKCRISDCYKPCLQDSKYCSEEHGREFVND
H3_YEAST
UNP
2
2
P61830
ARTKQTA
1
124
6J2P
1
120
Q03012
A
1
4
123
1
124
6J2P
1
120
Q03012
B
1
4
123
1
124
6J2P
1
120
Q03012
C
1
4
123
1
124
6J2P
1
120
Q03012
D
1
4
123
2
8
6J2P
1
7
P61830
E
2
1
7
2
8
6J2P
1
7
P61830
F
2
1
7
2
8
6J2P
1
7
P61830
G
2
1
7
2
8
6J2P
1
7
P61830
H
2
1
7
1
expression tag
SER
-2
6J2P
A
Q03012
UNP
1
1
expression tag
HIS
-1
6J2P
A
Q03012
UNP
2
1
expression tag
ASN
0
6J2P
A
Q03012
UNP
3
1
ASP
deletion
6J2P
A
Q03012
UNP
79
1
ALA
deletion
6J2P
A
Q03012
UNP
80
1
ILE
deletion
6J2P
A
Q03012
UNP
81
1
ILE
deletion
6J2P
A
Q03012
UNP
82
2
expression tag
SER
-2
6J2P
B
Q03012
UNP
1
2
expression tag
HIS
-1
6J2P
B
Q03012
UNP
2
2
expression tag
ASN
0
6J2P
B
Q03012
UNP
3
2
ASP
deletion
6J2P
B
Q03012
UNP
79
2
ALA
deletion
6J2P
B
Q03012
UNP
80
2
ILE
deletion
6J2P
B
Q03012
UNP
81
2
ILE
deletion
6J2P
B
Q03012
UNP
82
3
expression tag
SER
-2
6J2P
C
Q03012
UNP
1
3
expression tag
HIS
-1
6J2P
C
Q03012
UNP
2
3
expression tag
ASN
0
6J2P
C
Q03012
UNP
3
3
ASP
deletion
6J2P
C
Q03012
UNP
79
3
ALA
deletion
6J2P
C
Q03012
UNP
80
3
ILE
deletion
6J2P
C
Q03012
UNP
81
3
ILE
deletion
6J2P
C
Q03012
UNP
82
4
expression tag
SER
-2
6J2P
D
Q03012
UNP
1
4
expression tag
HIS
-1
6J2P
D
Q03012
UNP
2
4
expression tag
ASN
0
6J2P
D
Q03012
UNP
3
4
ASP
deletion
6J2P
D
Q03012
UNP
79
4
ALA
deletion
6J2P
D
Q03012
UNP
80
4
ILE
deletion
6J2P
D
Q03012
UNP
81
4
ILE
deletion
6J2P
D
Q03012
UNP
82
3
2
3
2
2
2
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TRP
45
A
TRP
48
A
HIS
47
A
HIS
50
A
MET
36
A
MET
39
A
GLY
38
A
GLY
41
E
THR
3
E
THR
3
E
M3L
4
E
M3L
4
A
VAL
61
A
VAL
64
A
SER
63
A
SER
66
A
LEU
88
A
LEU
91
A
TRP
89
A
TRP
92
B
TRP
45
B
TRP
48
B
HIS
47
B
HIS
50
B
MET
36
B
MET
39
B
GLY
38
B
GLY
41
F
THR
3
F
THR
3
F
M3L
4
F
M3L
4
B
VAL
61
B
VAL
64
B
SER
63
B
SER
66
B
LEU
88
B
LEU
91
B
TRP
89
B
TRP
92
C
MET
36
C
MET
39
C
GLY
38
C
GLY
41
C
TRP
45
C
TRP
48
C
HIS
47
C
HIS
50
C
VAL
61
C
VAL
64
C
SER
63
C
SER
66
C
LEU
88
C
LEU
91
C
TRP
89
C
TRP
92
D
TRP
45
D
TRP
48
D
HIS
47
D
HIS
50
D
MET
36
D
MET
39
D
GLY
38
D
GLY
41
G
THR
3
G
THR
3
G
M3L
4
G
M3L
4
D
VAL
61
D
VAL
64
D
SER
63
D
SER
66
D
LEU
88
D
LEU
91
D
TRP
89
D
TRP
92
binding site for residue ZN A 201
A
ZN
201
Software
4
binding site for residue ZN A 202
A
ZN
202
Software
4
binding site for residue ZN A 203
A
ZN
203
Software
4
binding site for residue ZN B 201
B
ZN
201
Software
4
binding site for residue ZN B 202
B
ZN
202
Software
4
binding site for residue ZN B 203
B
ZN
203
Software
4
binding site for residue ZN C 201
C
ZN
201
Software
4
binding site for residue ZN C 202
C
ZN
202
Software
5
binding site for residue ZN C 203
C
ZN
203
Software
4
binding site for residue ZN D 201
D
ZN
201
Software
4
binding site for residue ZN D 202
D
ZN
202
Software
4
binding site for residue ZN D 203
D
ZN
203
Software
3
A
CYS
39
A
CYS
42
4
1_555
A
CYS
42
A
CYS
45
4
1_555
A
CYS
66
A
CYS
69
4
1_555
A
CYS
69
A
CYS
72
4
1_555
A
CYS
93
A
CYS
96
4
1_555
A
CYS
98
A
CYS
101
4
1_555
A
CYS
109
A
CYS
112
4
1_555
A
HIS
113
A
HIS
116
4
1_555
A
CYS
25
A
CYS
28
4
1_555
A
CYS
27
A
CYS
30
4
1_555
A
HIS
47
A
HIS
50
4
1_555
A
CYS
50
A
CYS
53
4
1_555
B
CYS
25
B
CYS
28
4
1_555
B
CYS
27
B
CYS
30
4
1_555
B
HIS
47
B
HIS
50
4
1_555
B
CYS
50
B
CYS
53
4
1_555
B
CYS
39
B
CYS
42
4
1_555
B
CYS
42
B
CYS
45
4
1_555
B
CYS
66
B
CYS
69
4
1_555
B
CYS
69
B
CYS
72
4
1_555
B
CYS
93
B
CYS
96
4
1_555
B
CYS
98
B
CYS
101
4
1_555
B
CYS
109
B
CYS
112
4
1_555
B
HIS
113
B
HIS
116
4
1_555
C
CYS
25
C
CYS
28
4
1_555
C
CYS
27
C
CYS
30
4
1_555
C
HIS
47
C
HIS
50
4
1_555
C
CYS
50
C
CYS
53
4
1_555
C
CYS
39
C
CYS
42
5
1_555
C
CYS
42
C
CYS
45
5
1_555
C
CYS
66
C
CYS
69
5
1_555
C
CYS
69
C
CYS
72
5
1_555
C
THR
74
C
THR
77
5
1_555
C
CYS
93
C
CYS
96
4
1_555
C
CYS
98
C
CYS
101
4
1_555
C
CYS
109
C
CYS
112
4
1_555
C
HIS
113
C
HIS
116
4
1_555
D
CYS
25
D
CYS
28
4
1_555
D
CYS
27
D
CYS
30
4
1_555
D
HIS
47
D
HIS
50
4
1_555
D
CYS
50
D
CYS
53
4
1_555
D
CYS
39
D
CYS
42
4
1_555
D
CYS
42
D
CYS
45
4
1_555
D
CYS
66
D
CYS
69
4
1_555
D
CYS
69
D
CYS
72
4
1_555
D
CYS
93
D
CYS
96
3
1_555
D
CYS
98
D
CYS
101
3
1_555
D
CYS
109
D
CYS
112
3
1_555
20
C 2 2 21