0.014956
0.000000
0.000000
-0.000000
0.010476
0.000000
0.000000
-0.000000
0.013816
0.000000
0.000000
0.000000
Yang, J.
Xu, Y.
Miyakawa, T.
Tanokura, M.
Long, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
66.863
95.456
72.381
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-glucopyranose
beta-D-glucose; D-glucose; glucose
D-saccharide, beta linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
R
C
N
78
N
C
N
79
R
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
CA
N
99
N
N
N
100
R
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
S
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
S
C
N
114
R
C
N
115
S
C
N
116
S
C
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
N
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
S
C
N
159
N
C
N
160
N
O
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
O
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
Y
191
N
C
Y
192
N
N
Y
193
N
C
Y
194
N
C
Y
195
N
N
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
S
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
N
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
S
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
O
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
R
C
N
358
N
O
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
N
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
N
408
N
O
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
N
426
N
C
N
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
Y
188
N
sing
Y
189
N
doub
Y
190
N
doub
N
191
N
sing
Y
192
N
sing
N
193
N
sing
Y
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
Y
296
N
doub
Y
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
N
301
N
sing
Y
302
N
doub
N
303
N
sing
Y
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
sing
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
US
Appl.Environ.Microbiol.
AEMIDF
2106
1098-5336
86
10.1128/AEM.01796-20
32917756
Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
2020
10.2210/pdb6jia/pdb
pdb_00006jia
95
1
N
PIXEL
2018-11-17
DECTRIS PILATUS3 2M
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BL-5A
Photon Factory
1.0000
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-5A
27776.602
laminarinase
E135A
1
man
polymer
666.578
beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose
1
man
branched
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
254
nat
water
no
no
MQNWTLVWQDEFTNGISSDWVFETGNGNSGWGNNELQYYRRENATVENGNLVITAKRESIGGYNYTSTRMKTQGRKSWKY
GKVEARIAMPSFMGSWPAFWMLGDNISSVGWPACGAIDIMEHVNTEAQTHGTIHWQDHNNTYANYSGSIPVSSVTSYHIY
TIEWDASVIKWFVDGNLYHEASIANGVNGTSEFHNNFFILLNMAIGGNWPGFNIDNNAFPARMLVDYVRVYQKTDLEHHH
HHH
MQNWTLVWQDEFTNGISSDWVFETGNGNSGWGNNELQYYRRENATVENGNLVITAKRESIGGYNYTSTRMKTQGRKSWKY
GKVEARIAMPSFMGSWPAFWMLGDNISSVGWPACGAIDIMEHVNTEAQTHGTIHWQDHNNTYANYSGSIPVSSVTSYHIY
TIEWDASVIKWFVDGNLYHEASIANGVNGTSEFHNNFFILLNMAIGGNWPGFNIDNNAFPARMLVDYVRVYQKTDLEHHH
HHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
243
1872586
Aquimarina sp.
562
Escherichia coli
Biological sequence
1
2.08
40.84
VAPOR DIFFUSION, SITTING DROP
5% (v/v) ethonal, 28% PEG20000
100 mM MES pH7.0
293
atom_site
chem_comp
pdbx_nonpoly_scheme
pdbx_validate_chiral
atom_site
chem_comp
computing
entity
entity_src_gen
pdbx_database_related
pdbx_distant_solvent_atoms
pdbx_entity_instance_feature
pdbx_entity_nonpoly
pdbx_entry_details
pdbx_nonpoly_scheme
pdbx_struct_assembly
pdbx_struct_assembly_prop
pdbx_struct_conn_angle
pdbx_struct_sheet_hbond
pdbx_struct_special_symmetry
pdbx_validate_chiral
pdbx_validate_close_contact
pdbx_validate_symm_contact
pdbx_validate_torsion
refine
refine_hist
refine_ls_restr
refine_ls_shell
software
struct_asym
struct_conn
struct_mon_prot_cis
struct_site
struct_site_gen
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_struct_special_symmetry
pdbx_validate_close_contact
struct_asym
struct_conn
struct_conn_type
struct_site
struct_site_gen
audit_author
chem_comp
citation
citation_author
citation
citation
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Ligand geometry
author
Coordinate replacement
Carbohydrate remediation
repository
Remediation
Atomic model
Data collection
Advisory
Atomic model
Author supporting evidence
Data collection
Database references
Derived calculations
Non-polymer description
Refinement description
Source and taxonomy
Structure summary
Advisory
Atomic model
Data collection
Derived calculations
Structure summary
Database references
Structure summary
Database references
Database references
Data collection
Database references
Refinement description
1
0
2019-05-15
2
0
2019-09-18
3
0
2020-05-06
4
0
2020-07-29
4
1
2020-09-30
4
2
2020-10-07
4
3
2020-11-25
4
4
2023-11-22
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.label_atom_id
_chem_comp.type
_pdbx_nonpoly_scheme.ndb_seq_num
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id
_entity_src_gen.pdbx_gene_src_scientific_name
_pdbx_distant_solvent_atoms.auth_seq_id
_pdbx_entry_details.has_ligand_of_interest
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly_prop.value
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_refine.B_iso_max
_refine.B_iso_mean
_refine.B_iso_min
_refine.aniso_B[1][1]
_refine.aniso_B[2][2]
_refine.aniso_B[3][3]
_refine.correlation_coeff_Fo_to_Fc
_refine.correlation_coeff_Fo_to_Fc_free
_refine.details
_refine.ls_R_factor_R_free
_refine.ls_R_factor_R_work
_refine.ls_R_factor_obs
_refine.ls_d_res_low
_refine.overall_SU_B
_refine.overall_SU_ML
_refine.pdbx_ls_sigma_F
_refine.pdbx_overall_ESU_R
_refine.pdbx_overall_ESU_R_Free
_refine.pdbx_stereochemistry_target_values
_refine.solvent_model_details
_refine_hist.cycle_id
_refine_hist.d_res_low
_refine_hist.number_atoms_solvent
_refine_hist.number_atoms_total
_refine_hist.pdbx_B_iso_mean_ligand
_refine_hist.pdbx_B_iso_mean_solvent
_refine_hist.pdbx_number_residues_total
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.number_reflns_all
_software.version
_struct_asym.entity_id
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_symmetry
_struct_mon_prot_cis.pdbx_omega_angle
_struct_site.details
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_num_residues
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.value
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn_type.id
_audit_author.name
_chem_comp.pdbx_synonyms
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.pdbx_database_id_DOI
_citation.title
_citation.year
_citation_author.name
_citation.pdbx_database_id_PubMed
_citation.title
_citation.journal_volume
_citation.title
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
B
L4M
1
n
B
GLC
1
B
L4M
1
n
B
BGC
2
B
L4M
1
n
B
BGC
3
B
L4M
1
n
B
BGC
4
DGlcpb
b-D-glucopyranose
b-D-Glcp
Glc
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
N
PDBJ
Y
PDBJ
2019-02-20
REL
REL
1
A
O
HOH
654
6.50
oligosaccharide
DGlcpb1-3DGlcpb1-3DGlcpb1-3DGlcpa1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,4,3/[a2122h-1a_1-5][a2122h-1b_1-5]/1-2-2-2/a3-b1_b3-c1_c3-d1
2
PDB2Glycan
1.1.0
WURCS
[][a-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{}}}}
2
PDB-CARE
LINUCS
C1
O3
BGC
GLC
2
1
2
O1
HO3
sing
C1
O3
BGC
BGC
3
2
2
O1
HO3
sing
C1
O3
BGC
BGC
4
3
2
O1
HO3
sing
n
n
n
n
CA
CA
SUBJECT OF INVESTIGATION
CA
CALCIUM ION
HOH
water
Y
This protein is E135A mutant.
4CRQ
PDB
experimental model
CA
1
3
CA
CA
301
A
HOH
258
4
HOH
HOH
401
A
HOH
199
4
HOH
HOH
402
A
HOH
81
4
HOH
HOH
403
A
HOH
64
4
HOH
HOH
404
A
HOH
33
4
HOH
HOH
405
A
HOH
181
4
HOH
HOH
406
A
HOH
145
4
HOH
HOH
407
A
HOH
150
4
HOH
HOH
408
A
HOH
70
4
HOH
HOH
409
A
HOH
177
4
HOH
HOH
410
A
HOH
57
4
HOH
HOH
411
A
HOH
122
4
HOH
HOH
412
A
HOH
206
4
HOH
HOH
413
A
HOH
188
4
HOH
HOH
414
A
HOH
100
4
HOH
HOH
415
A
HOH
132
4
HOH
HOH
416
A
HOH
76
4
HOH
HOH
417
A
HOH
165
4
HOH
HOH
418
A
HOH
86
4
HOH
HOH
419
A
HOH
44
4
HOH
HOH
420
A
HOH
135
4
HOH
HOH
421
A
HOH
143
4
HOH
HOH
422
A
HOH
259
4
HOH
HOH
423
A
HOH
112
4
HOH
HOH
424
A
HOH
28
4
HOH
HOH
425
A
HOH
54
4
HOH
HOH
426
A
HOH
61
4
HOH
HOH
427
A
HOH
4
4
HOH
HOH
428
A
HOH
183
4
HOH
HOH
429
A
HOH
3
4
HOH
HOH
430
A
HOH
53
4
HOH
HOH
431
A
HOH
31
4
HOH
HOH
432
A
HOH
114
4
HOH
HOH
433
A
HOH
5
4
HOH
HOH
434
A
HOH
30
4
HOH
HOH
435
A
HOH
26
4
HOH
HOH
436
A
HOH
23
4
HOH
HOH
437
A
HOH
187
4
HOH
HOH
438
A
HOH
185
4
HOH
HOH
439
A
HOH
72
4
HOH
HOH
440
A
HOH
7
4
HOH
HOH
441
A
HOH
67
4
HOH
HOH
442
A
HOH
87
4
HOH
HOH
443
A
HOH
88
4
HOH
HOH
444
A
HOH
156
4
HOH
HOH
445
A
HOH
179
4
HOH
HOH
446
A
HOH
32
4
HOH
HOH
447
A
HOH
39
4
HOH
HOH
448
A
HOH
41
4
HOH
HOH
449
A
HOH
85
4
HOH
HOH
450
A
HOH
151
4
HOH
HOH
451
A
HOH
158
4
HOH
HOH
452
A
HOH
111
4
HOH
HOH
453
A
HOH
13
4
HOH
HOH
454
A
HOH
190
4
HOH
HOH
455
A
HOH
197
4
HOH
HOH
456
A
HOH
153
4
HOH
HOH
457
A
HOH
209
4
HOH
HOH
458
A
HOH
184
4
HOH
HOH
459
A
HOH
231
4
HOH
HOH
460
A
HOH
29
4
HOH
HOH
461
A
HOH
1
4
HOH
HOH
462
A
HOH
71
4
HOH
HOH
463
A
HOH
163
4
HOH
HOH
464
A
HOH
241
4
HOH
HOH
465
A
HOH
2
4
HOH
HOH
466
A
HOH
60
4
HOH
HOH
467
A
HOH
104
4
HOH
HOH
468
A
HOH
93
4
HOH
HOH
469
A
HOH
230
4
HOH
HOH
470
A
HOH
22
4
HOH
HOH
471
A
HOH
134
4
HOH
HOH
472
A
HOH
63
4
HOH
HOH
473
A
HOH
116
4
HOH
HOH
474
A
HOH
16
4
HOH
HOH
475
A
HOH
204
4
HOH
HOH
476
A
HOH
34
4
HOH
HOH
477
A
HOH
35
4
HOH
HOH
478
A
HOH
62
4
HOH
HOH
479
A
HOH
133
4
HOH
HOH
480
A
HOH
42
4
HOH
HOH
481
A
HOH
120
4
HOH
HOH
482
A
HOH
155
4
HOH
HOH
483
A
HOH
130
4
HOH
HOH
484
A
HOH
195
4
HOH
HOH
485
A
HOH
229
4
HOH
HOH
486
A
HOH
167
4
HOH
HOH
487
A
HOH
219
4
HOH
HOH
488
A
HOH
8
4
HOH
HOH
489
A
HOH
15
4
HOH
HOH
490
A
HOH
236
4
HOH
HOH
491
A
HOH
149
4
HOH
HOH
492
A
HOH
239
4
HOH
HOH
493
A
HOH
12
4
HOH
HOH
494
A
HOH
94
4
HOH
HOH
495
A
HOH
95
4
HOH
HOH
496
A
HOH
152
4
HOH
HOH
497
A
HOH
103
4
HOH
HOH
498
A
HOH
14
4
HOH
HOH
499
A
HOH
105
4
HOH
HOH
500
A
HOH
10
4
HOH
HOH
501
A
HOH
166
4
HOH
HOH
502
A
HOH
216
4
HOH
HOH
503
A
HOH
210
4
HOH
HOH
504
A
HOH
118
4
HOH
HOH
505
A
HOH
78
4
HOH
HOH
506
A
HOH
189
4
HOH
HOH
507
A
HOH
172
4
HOH
HOH
508
A
HOH
233
4
HOH
HOH
509
A
HOH
255
4
HOH
HOH
510
A
HOH
124
4
HOH
HOH
511
A
HOH
45
4
HOH
HOH
512
A
HOH
55
4
HOH
HOH
513
A
HOH
50
4
HOH
HOH
514
A
HOH
43
4
HOH
HOH
515
A
HOH
117
4
HOH
HOH
516
A
HOH
194
4
HOH
HOH
517
A
HOH
213
4
HOH
HOH
518
A
HOH
19
4
HOH
HOH
519
A
HOH
46
4
HOH
HOH
520
A
HOH
11
4
HOH
HOH
521
A
HOH
21
4
HOH
HOH
522
A
HOH
25
4
HOH
HOH
523
A
HOH
131
4
HOH
HOH
524
A
HOH
107
4
HOH
HOH
525
A
HOH
18
4
HOH
HOH
526
A
HOH
101
4
HOH
HOH
527
A
HOH
9
4
HOH
HOH
528
A
HOH
256
4
HOH
HOH
529
A
HOH
113
4
HOH
HOH
530
A
HOH
137
4
HOH
HOH
531
A
HOH
75
4
HOH
HOH
532
A
HOH
96
4
HOH
HOH
533
A
HOH
48
4
HOH
HOH
534
A
HOH
66
4
HOH
HOH
535
A
HOH
148
4
HOH
HOH
536
A
HOH
36
4
HOH
HOH
537
A
HOH
168
4
HOH
HOH
538
A
HOH
250
4
HOH
HOH
539
A
HOH
193
4
HOH
HOH
540
A
HOH
84
4
HOH
HOH
541
A
HOH
119
4
HOH
HOH
542
A
HOH
97
4
HOH
HOH
543
A
HOH
74
4
HOH
HOH
544
A
HOH
99
4
HOH
HOH
545
A
HOH
142
4
HOH
HOH
546
A
HOH
198
4
HOH
HOH
547
A
HOH
110
4
HOH
HOH
548
A
HOH
83
4
HOH
HOH
549
A
HOH
211
4
HOH
HOH
550
A
HOH
214
4
HOH
HOH
551
A
HOH
115
4
HOH
HOH
552
A
HOH
244
4
HOH
HOH
553
A
HOH
191
4
HOH
HOH
554
A
HOH
59
4
HOH
HOH
555
A
HOH
73
4
HOH
HOH
556
A
HOH
69
4
HOH
HOH
557
A
HOH
24
4
HOH
HOH
558
A
HOH
192
4
HOH
HOH
559
A
HOH
65
4
HOH
HOH
560
A
HOH
58
4
HOH
HOH
561
A
HOH
109
4
HOH
HOH
562
A
HOH
147
4
HOH
HOH
563
A
HOH
91
4
HOH
HOH
564
A
HOH
159
4
HOH
HOH
565
A
HOH
38
4
HOH
HOH
566
A
HOH
127
4
HOH
HOH
567
A
HOH
141
4
HOH
HOH
568
A
HOH
90
4
HOH
HOH
569
A
HOH
227
4
HOH
HOH
570
A
HOH
6
4
HOH
HOH
571
A
HOH
17
4
HOH
HOH
572
A
HOH
49
4
HOH
HOH
573
A
HOH
144
4
HOH
HOH
574
A
HOH
139
4
HOH
HOH
575
A
HOH
92
4
HOH
HOH
576
A
HOH
37
4
HOH
HOH
577
A
HOH
20
4
HOH
HOH
578
A
HOH
40
4
HOH
HOH
579
A
HOH
98
4
HOH
HOH
580
A
HOH
47
4
HOH
HOH
581
A
HOH
202
4
HOH
HOH
582
A
HOH
223
4
HOH
HOH
583
A
HOH
221
4
HOH
HOH
584
A
HOH
160
4
HOH
HOH
585
A
HOH
222
4
HOH
HOH
586
A
HOH
173
4
HOH
HOH
587
A
HOH
201
4
HOH
HOH
588
A
HOH
52
4
HOH
HOH
589
A
HOH
146
4
HOH
HOH
590
A
HOH
247
4
HOH
HOH
591
A
HOH
138
4
HOH
HOH
592
A
HOH
154
4
HOH
HOH
593
A
HOH
140
4
HOH
HOH
594
A
HOH
56
4
HOH
HOH
595
A
HOH
182
4
HOH
HOH
596
A
HOH
224
4
HOH
HOH
597
A
HOH
225
4
HOH
HOH
598
A
HOH
178
4
HOH
HOH
599
A
HOH
228
4
HOH
HOH
600
A
HOH
170
4
HOH
HOH
601
A
HOH
218
4
HOH
HOH
602
A
HOH
125
4
HOH
HOH
603
A
HOH
180
4
HOH
HOH
604
A
HOH
226
4
HOH
HOH
605
A
HOH
106
4
HOH
HOH
606
A
HOH
208
4
HOH
HOH
607
A
HOH
161
4
HOH
HOH
608
A
HOH
215
4
HOH
HOH
609
A
HOH
232
4
HOH
HOH
610
A
HOH
252
4
HOH
HOH
611
A
HOH
203
4
HOH
HOH
612
A
HOH
80
4
HOH
HOH
613
A
HOH
169
4
HOH
HOH
614
A
HOH
175
4
HOH
HOH
615
A
HOH
242
4
HOH
HOH
616
A
HOH
123
4
HOH
HOH
617
A
HOH
212
4
HOH
HOH
618
A
HOH
237
4
HOH
HOH
619
A
HOH
68
4
HOH
HOH
620
A
HOH
253
4
HOH
HOH
621
A
HOH
243
4
HOH
HOH
622
A
HOH
235
4
HOH
HOH
623
A
HOH
257
4
HOH
HOH
624
A
HOH
248
4
HOH
HOH
625
A
HOH
136
4
HOH
HOH
626
A
HOH
157
4
HOH
HOH
627
A
HOH
129
4
HOH
HOH
628
A
HOH
251
4
HOH
HOH
629
A
HOH
205
4
HOH
HOH
630
A
HOH
171
4
HOH
HOH
631
A
HOH
245
4
HOH
HOH
632
A
HOH
176
4
HOH
HOH
633
A
HOH
102
4
HOH
HOH
634
A
HOH
186
4
HOH
HOH
635
A
HOH
128
4
HOH
HOH
636
A
HOH
207
4
HOH
HOH
637
A
HOH
27
4
HOH
HOH
638
A
HOH
89
4
HOH
HOH
639
A
HOH
174
4
HOH
HOH
640
A
HOH
121
4
HOH
HOH
641
A
HOH
79
4
HOH
HOH
642
A
HOH
238
4
HOH
HOH
643
A
HOH
164
4
HOH
HOH
644
A
HOH
254
4
HOH
HOH
645
A
HOH
77
4
HOH
HOH
646
A
HOH
51
4
HOH
HOH
647
A
HOH
162
4
HOH
HOH
648
A
HOH
200
4
HOH
HOH
649
A
HOH
126
4
HOH
HOH
650
A
HOH
220
4
HOH
HOH
651
A
HOH
240
4
HOH
HOH
652
A
HOH
249
4
HOH
HOH
653
A
HOH
234
4
HOH
HOH
654
A
n
1
20
A
n
2
21
A
ASN
22
n
3
ASN
22
A
TRP
23
n
4
TRP
23
A
THR
24
n
5
THR
24
A
LEU
25
n
6
LEU
25
A
VAL
26
n
7
VAL
26
A
TRP
27
n
8
TRP
27
A
GLN
28
n
9
GLN
28
A
ASP
29
n
10
ASP
29
A
GLU
30
n
11
GLU
30
A
PHE
31
n
12
PHE
31
A
THR
32
n
13
THR
32
A
ASN
33
n
14
ASN
33
A
GLY
34
n
15
GLY
34
A
ILE
35
n
16
ILE
35
A
SER
36
n
17
SER
36
A
SER
37
n
18
SER
37
A
ASP
38
n
19
ASP
38
A
TRP
39
n
20
TRP
39
A
VAL
40
n
21
VAL
40
A
PHE
41
n
22
PHE
41
A
GLU
42
n
23
GLU
42
A
THR
43
n
24
THR
43
A
GLY
44
n
25
GLY
44
A
ASN
45
n
26
ASN
45
A
GLY
46
n
27
GLY
46
A
ASN
47
n
28
ASN
47
A
SER
48
n
29
SER
48
A
GLY
49
n
30
GLY
49
A
TRP
50
n
31
TRP
50
A
GLY
51
n
32
GLY
51
A
ASN
52
n
33
ASN
52
A
ASN
53
n
34
ASN
53
A
GLU
54
n
35
GLU
54
A
LEU
55
n
36
LEU
55
A
GLN
56
n
37
GLN
56
A
TYR
57
n
38
TYR
57
A
TYR
58
n
39
TYR
58
A
ARG
59
n
40
ARG
59
A
ARG
60
n
41
ARG
60
A
GLU
61
n
42
GLU
61
A
ASN
62
n
43
ASN
62
A
ALA
63
n
44
ALA
63
A
THR
64
n
45
THR
64
A
VAL
65
n
46
VAL
65
A
GLU
66
n
47
GLU
66
A
ASN
67
n
48
ASN
67
A
GLY
68
n
49
GLY
68
A
ASN
69
n
50
ASN
69
A
LEU
70
n
51
LEU
70
A
VAL
71
n
52
VAL
71
A
ILE
72
n
53
ILE
72
A
THR
73
n
54
THR
73
A
ALA
74
n
55
ALA
74
A
LYS
75
n
56
LYS
75
A
ARG
76
n
57
ARG
76
A
GLU
77
n
58
GLU
77
A
SER
78
n
59
SER
78
A
ILE
79
n
60
ILE
79
A
GLY
80
n
61
GLY
80
A
GLY
81
n
62
GLY
81
A
TYR
82
n
63
TYR
82
A
ASN
83
n
64
ASN
83
A
TYR
84
n
65
TYR
84
A
THR
85
n
66
THR
85
A
SER
86
n
67
SER
86
A
THR
87
n
68
THR
87
A
ARG
88
n
69
ARG
88
A
MET
89
n
70
MET
89
A
LYS
90
n
71
LYS
90
A
THR
91
n
72
THR
91
A
GLN
92
n
73
GLN
92
A
GLY
93
n
74
GLY
93
A
ARG
94
n
75
ARG
94
A
LYS
95
n
76
LYS
95
A
SER
96
n
77
SER
96
A
TRP
97
n
78
TRP
97
A
LYS
98
n
79
LYS
98
A
TYR
99
n
80
TYR
99
A
GLY
100
n
81
GLY
100
A
LYS
101
n
82
LYS
101
A
VAL
102
n
83
VAL
102
A
GLU
103
n
84
GLU
103
A
ALA
104
n
85
ALA
104
A
ARG
105
n
86
ARG
105
A
ILE
106
n
87
ILE
106
A
ALA
107
n
88
ALA
107
A
MET
108
n
89
MET
108
A
PRO
109
n
90
PRO
109
A
SER
110
n
91
SER
110
A
PHE
111
n
92
PHE
111
A
MET
112
n
93
MET
112
A
GLY
113
n
94
GLY
113
A
SER
114
n
95
SER
114
A
TRP
115
n
96
TRP
115
A
PRO
116
n
97
PRO
116
A
ALA
117
n
98
ALA
117
A
PHE
118
n
99
PHE
118
A
TRP
119
n
100
TRP
119
A
MET
120
n
101
MET
120
A
LEU
121
n
102
LEU
121
A
GLY
122
n
103
GLY
122
A
ASP
123
n
104
ASP
123
A
ASN
124
n
105
ASN
124
A
ILE
125
n
106
ILE
125
A
SER
126
n
107
SER
126
A
SER
127
n
108
SER
127
A
VAL
128
n
109
VAL
128
A
GLY
129
n
110
GLY
129
A
TRP
130
n
111
TRP
130
A
PRO
131
n
112
PRO
131
A
ALA
132
n
113
ALA
132
A
CYS
133
n
114
CYS
133
A
GLY
134
n
115
GLY
134
A
ALA
135
n
116
ALA
135
A
ILE
136
n
117
ILE
136
A
ASP
137
n
118
ASP
137
A
ILE
138
n
119
ILE
138
A
MET
139
n
120
MET
139
A
GLU
140
n
121
GLU
140
A
HIS
141
n
122
HIS
141
A
VAL
142
n
123
VAL
142
A
ASN
143
n
124
ASN
143
A
THR
144
n
125
THR
144
A
GLU
145
n
126
GLU
145
A
ALA
146
n
127
ALA
146
A
GLN
147
n
128
GLN
147
A
THR
148
n
129
THR
148
A
HIS
149
n
130
HIS
149
A
GLY
150
n
131
GLY
150
A
THR
151
n
132
THR
151
A
ILE
152
n
133
ILE
152
A
HIS
153
n
134
HIS
153
A
TRP
154
n
135
TRP
154
A
GLN
155
n
136
GLN
155
A
ASP
156
n
137
ASP
156
A
HIS
157
n
138
HIS
157
A
ASN
158
n
139
ASN
158
A
ASN
159
n
140
ASN
159
A
THR
160
n
141
THR
160
A
TYR
161
n
142
TYR
161
A
ALA
162
n
143
ALA
162
A
ASN
163
n
144
ASN
163
A
TYR
164
n
145
TYR
164
A
SER
165
n
146
SER
165
A
GLY
166
n
147
GLY
166
A
SER
167
n
148
SER
167
A
ILE
168
n
149
ILE
168
A
PRO
169
n
150
PRO
169
A
VAL
170
n
151
VAL
170
A
SER
171
n
152
SER
171
A
SER
172
n
153
SER
172
A
VAL
173
n
154
VAL
173
A
THR
174
n
155
THR
174
A
SER
175
n
156
SER
175
A
TYR
176
n
157
TYR
176
A
HIS
177
n
158
HIS
177
A
ILE
178
n
159
ILE
178
A
TYR
179
n
160
TYR
179
A
THR
180
n
161
THR
180
A
ILE
181
n
162
ILE
181
A
GLU
182
n
163
GLU
182
A
TRP
183
n
164
TRP
183
A
ASP
184
n
165
ASP
184
A
ALA
185
n
166
ALA
185
A
SER
186
n
167
SER
186
A
VAL
187
n
168
VAL
187
A
ILE
188
n
169
ILE
188
A
LYS
189
n
170
LYS
189
A
TRP
190
n
171
TRP
190
A
PHE
191
n
172
PHE
191
A
VAL
192
n
173
VAL
192
A
ASP
193
n
174
ASP
193
A
GLY
194
n
175
GLY
194
A
ASN
195
n
176
ASN
195
A
LEU
196
n
177
LEU
196
A
TYR
197
n
178
TYR
197
A
HIS
198
n
179
HIS
198
A
GLU
199
n
180
GLU
199
A
ALA
200
n
181
ALA
200
A
SER
201
n
182
SER
201
A
ILE
202
n
183
ILE
202
A
ALA
203
n
184
ALA
203
A
ASN
204
n
185
ASN
204
A
GLY
205
n
186
GLY
205
A
VAL
206
n
187
VAL
206
A
ASN
207
n
188
ASN
207
A
GLY
208
n
189
GLY
208
A
THR
209
n
190
THR
209
A
SER
210
n
191
SER
210
A
GLU
211
n
192
GLU
211
A
PHE
212
n
193
PHE
212
A
HIS
213
n
194
HIS
213
A
ASN
214
n
195
ASN
214
A
ASN
215
n
196
ASN
215
A
PHE
216
n
197
PHE
216
A
PHE
217
n
198
PHE
217
A
ILE
218
n
199
ILE
218
A
LEU
219
n
200
LEU
219
A
LEU
220
n
201
LEU
220
A
ASN
221
n
202
ASN
221
A
MET
222
n
203
MET
222
A
ALA
223
n
204
ALA
223
A
ILE
224
n
205
ILE
224
A
GLY
225
n
206
GLY
225
A
GLY
226
n
207
GLY
226
A
ASN
227
n
208
ASN
227
A
TRP
228
n
209
TRP
228
A
PRO
229
n
210
PRO
229
A
GLY
230
n
211
GLY
230
A
PHE
231
n
212
PHE
231
A
ASN
232
n
213
ASN
232
A
ILE
233
n
214
ILE
233
A
ASP
234
n
215
ASP
234
A
ASN
235
n
216
ASN
235
A
ASN
236
n
217
ASN
236
A
ALA
237
n
218
ALA
237
A
PHE
238
n
219
PHE
238
A
PRO
239
n
220
PRO
239
A
ALA
240
n
221
ALA
240
A
ARG
241
n
222
ARG
241
A
MET
242
n
223
MET
242
A
LEU
243
n
224
LEU
243
A
VAL
244
n
225
VAL
244
A
ASP
245
n
226
ASP
245
A
TYR
246
n
227
TYR
246
A
VAL
247
n
228
VAL
247
A
ARG
248
n
229
ARG
248
A
VAL
249
n
230
VAL
249
A
TYR
250
n
231
TYR
250
A
GLN
251
n
232
GLN
251
A
LYS
252
n
233
LYS
252
A
n
234
253
A
n
235
254
A
n
236
255
A
n
237
256
A
n
238
257
A
n
239
258
A
n
240
259
A
n
241
260
A
n
242
261
A
n
243
262
A
author_defined_assembly
1
monomeric
none
1370
1
9650
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
A
GLY
68
A
O
GLY
49
1_555
85.3
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
245
A
O
ASP
226
1_555
84.5
A
GLY
68
A
O
GLY
49
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
245
A
O
ASP
226
1_555
99.0
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
245
A
OD1
ASP
226
1_555
161.0
A
GLY
68
A
O
GLY
49
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
245
A
OD1
ASP
226
1_555
97.1
A
ASP
245
A
O
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
245
A
OD1
ASP
226
1_555
76.5
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
422
D
O
HOH
1_555
97.2
A
GLY
68
A
O
GLY
49
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
422
D
O
HOH
1_555
170.1
A
ASP
245
A
O
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
422
D
O
HOH
1_555
90.7
A
ASP
245
A
OD1
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
422
D
O
HOH
1_555
83.6
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
559
D
O
HOH
1_555
133.3
A
GLY
68
A
O
GLY
49
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
559
D
O
HOH
1_555
91.1
A
ASP
245
A
O
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
559
D
O
HOH
1_555
141.7
A
ASP
245
A
OD1
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
559
D
O
HOH
1_555
65.6
A
HOH
422
D
O
HOH
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
559
D
O
HOH
1_555
80.2
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
84.6
A
GLY
68
A
O
GLY
49
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
90.1
A
ASP
245
A
O
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
165.1
A
ASP
245
A
OD1
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
114.1
A
HOH
422
D
O
HOH
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
80.6
A
HOH
559
D
O
HOH
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
48.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
26
A
N
VAL
7
A
O
VAL
249
A
O
VAL
230
A
O
MET
242
A
O
MET
223
A
N
ILE
72
A
N
ILE
53
A
O
VAL
71
A
O
VAL
52
A
N
THR
64
A
N
THR
45
A
N
TYR
57
A
N
TYR
38
A
O
TYR
84
A
O
TYR
65
A
O
TYR
82
A
O
TYR
63
A
N
ILE
79
A
N
ILE
60
A
N
ILE
72
A
N
ILE
53
A
O
MET
242
A
O
MET
223
A
O
ARG
248
A
O
ARG
229
A
N
GLU
103
A
N
GLU
84
A
N
GLY
100
A
N
GLY
81
A
O
TRP
183
A
O
TRP
164
A
N
GLU
182
A
N
GLU
163
A
O
LYS
189
A
O
LYS
170
A
N
TRP
190
A
N
TRP
171
A
O
HIS
198
A
O
HIS
179
A
N
VAL
40
A
N
VAL
21
A
O
LYS
90
A
O
LYS
71
A
N
MET
89
A
N
MET
70
A
O
LEU
220
A
O
LEU
201
A
O
LEU
219
A
O
LEU
200
A
N
TRP
119
A
N
TRP
100
A
N
PHE
118
A
N
PHE
99
A
O
MET
139
A
O
MET
120
A
N
ASP
137
A
N
ASP
118
A
O
THR
151
A
O
THR
132
A
N
TRP
154
A
N
TRP
135
A
O
ALA
162
A
O
ALA
143
1
A
HOH
597
D
HOH
1
A
HOH
642
D
HOH
1
A
MET
20
A
MET
1
1
Y
1
A
GLN
21
A
GLN
2
1
Y
1
A
THR
253
A
THR
234
1
Y
1
A
ASP
254
A
ASP
235
1
Y
1
A
LEU
255
A
LEU
236
1
Y
1
A
GLU
256
A
GLU
237
1
Y
1
A
HIS
257
A
HIS
238
1
Y
1
A
HIS
258
A
HIS
239
1
Y
1
A
HIS
259
A
HIS
240
1
Y
1
A
HIS
260
A
HIS
241
1
Y
1
A
HIS
261
A
HIS
242
1
Y
1
A
HIS
262
A
HIS
243
1
Y
1
B
A
O1
O
GLC
HOH
1
401
2.02
1
A
A
O
O
HOH
HOH
429
563
2.03
1
A
A
O
O
HOH
HOH
512
624
2.07
1
A
A
O
O
HOH
HOH
624
634
2.13
1
A
A
O
O
HOH
HOH
455
564
2.16
1
A
A
O
O
HOH
HOH
585
589
2.19
1
A
A
O
O
HOH
HOH
629
629
2.09
1_555
4_555
1
A
ASN
33
-116.82
77.75
1
A
SER
86
-169.66
-167.93
1
A
ARG
94
-120.90
-54.49
1
A
TYR
99
68.37
154.94
1
A
TRP
115
-155.17
72.54
1
A
ASN
143
57.53
-132.97
1
A
ALA
146
-92.43
37.31
69.960
22.9700
16.080
-1.2400
-0.0000
-0.0000
2.3300
-0.0000
-1.0900
0.9710
0.9560
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.1867
0.1503
0.1521
1.9000
39.8800
916
17640
4.9000
99.8000
2.8580
0.0810
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1420
0.1260
0.8000
0.8000
1.2000
4crq
MAXIMUM LIKELIHOOD
MASK
1.9000
39.8800
254
2154
33.98
38.52
46
0
1854
231
0.012
0.013
1964
0.001
0.018
1603
1.689
1.663
2684
1.427
1.568
3716
8.388
5.000
232
34.382
23.303
109
12.634
15.000
282
19.577
15.000
8
0.087
0.200
261
0.011
0.020
2207
0.001
0.020
449
0.2800
0.0000
0.2210
1.9500
65
1263
1328
20
97.9400
1.90
47.73
6JIA
18576
0.067
1
17.5
6.3
99.8
0.460
1.90
1.94
3.5
1147
1
5.0
97.4
refinement
REFMAC
5.8.0258
data reduction
XDS
data scaling
XDS
phasing
PHENIX
N
Marine bacterial laminarinase mutant E135A complex with laminaritetraose
1
N
N
2
N
N
3
N
N
4
N
N
A
ASN
124
A
ASN
105
HELX_P
A
GLY
129
A
GLY
110
1
AA1
6
A
ALA
203
A
ALA
184
HELX_P
A
ASN
214
A
ASN
195
5
AA2
12
A
ASP
234
A
ASP
215
HELX_P
A
PHE
238
A
PHE
219
5
AA3
5
covale
1.468
both
B
GLC
1
B
O3
GLC
1_555
B
BGC
2
B
C1
BGC
1_555
covale
1.451
both
B
BGC
2
B
O3
BGC
1_555
B
BGC
3
B
C1
BGC
1_555
covale
1.405
both
B
BGC
3
B
O3
BGC
1_555
B
BGC
4
B
C1
BGC
1_555
metalc
2.315
A
GLU
30
A
O
GLU
11
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.201
A
GLY
68
A
O
GLY
49
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.267
A
ASP
245
A
O
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.604
A
ASP
245
A
OD1
ASP
226
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.429
A
CA
301
C
CA
CA
1_555
A
HOH
422
D
O
HOH
1_555
metalc
2.830
A
CA
301
C
CA
CA
1_555
A
HOH
559
D
O
HOH
1_555
metalc
2.539
A
CA
301
C
CA
CA
1_555
A
HOH
596
D
O
HOH
1_555
HYDROLASE
Hydrolase
A
TRP
130
A
TRP
111
1
A
PRO
131
A
PRO
112
2.36
A
PHE
238
A
PHE
219
1
A
PRO
239
A
PRO
220
-2.09
6JIA
PDB
1
1
6JIA
20
262
6JIA
20
262
6JIA
A
1
1
243
4
8
7
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
24
A
THR
5
A
ASP
29
A
ASP
10
A
ALA
240
A
ALA
221
A
GLN
251
A
GLN
232
A
ASN
69
A
ASN
50
A
ILE
79
A
ILE
60
A
ALA
63
A
ALA
44
A
GLU
66
A
GLU
47
A
GLN
56
A
GLN
37
A
TYR
58
A
TYR
39
A
TYR
82
A
TYR
63
A
SER
86
A
SER
67
A
ASN
69
A
ASN
50
A
ILE
79
A
ILE
60
A
ALA
240
A
ALA
221
A
GLN
251
A
GLN
232
A
GLY
100
A
GLY
81
A
ALA
107
A
ALA
88
A
HIS
177
A
HIS
158
A
TRP
183
A
TRP
164
A
VAL
187
A
VAL
168
A
VAL
192
A
VAL
173
A
ASN
195
A
ASN
176
A
SER
201
A
SER
182
A
VAL
40
A
VAL
21
A
PHE
41
A
PHE
22
A
ARG
88
A
ARG
69
A
LYS
90
A
LYS
71
A
PHE
216
A
PHE
197
A
ILE
224
A
ILE
205
A
SER
114
A
SER
95
A
GLY
122
A
GLY
103
A
ALA
135
A
ALA
116
A
GLU
140
A
GLU
121
A
GLN
147
A
GLN
128
A
GLN
155
A
GLN
136
A
TYR
161
A
TYR
142
A
PRO
169
A
PRO
150
20
C 2 2 21