0.005960
0.000000
0.004326
0.000000
0.015617
0.000000
0.000000
0.000000
0.010476
0.00000
0.00000
0.00000
Cui, W.
Cui, S.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
125.97
90.00
167.787
64.034
117.953
C7 H8 O
108.138
phenylmethanol
non-polymer
C5 H5 N O3
127.098
5-methyl-1,2-oxazole-3-carboxylic acid
peptide-like
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C9 H14 N2 O3
198.219
(E,4S)-4-azanyl-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pent-2-enoic acid
peptide-like
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
Y
17
N
C
Y
18
N
C
N
19
N
C
Y
20
N
O
Y
21
N
N
Y
22
N
C
N
23
N
C
N
24
N
O
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
O
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
O
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
N
N
45
S
C
N
46
N
C
N
47
N
O
N
48
N
C
N
49
N
C
N
50
N
C
N
51
N
N
N
52
N
C
N
53
N
N
N
54
N
N
N
55
N
O
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
O
N
78
N
N
N
79
N
O
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
R
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
S
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
N
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
Y
172
N
C
Y
173
N
N
Y
174
N
C
Y
175
N
C
Y
176
N
N
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
S
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
N
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
S
N
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
S
C
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
S
C
N
310
N
C
N
311
N
C
N
312
N
N
N
313
N
C
N
314
N
O
N
315
N
N
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
C
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
O
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
R
C
N
367
N
O
N
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
N
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
N
435
N
C
N
436
N
C
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
Y
6
N
doub
Y
7
N
sing
N
8
N
sing
Y
9
N
doub
N
10
N
sing
Y
11
N
sing
N
12
N
sing
Y
13
N
doub
N
14
N
sing
Y
15
N
sing
N
16
N
sing
Y
17
N
sing
Y
18
N
doub
N
19
N
sing
Y
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
doub
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
doub
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
Y
170
N
sing
Y
171
N
doub
Y
172
N
doub
N
173
N
sing
Y
174
N
sing
N
175
N
sing
Y
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
doub
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
E
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
US
Biochem. Biophys. Res. Commun.
BBRCA9
0146
1090-2104
511
794
799
10.1016/j.bbrc.2019.02.105
30833083
The crystal structure of main protease from mouse hepatitis virus A59 in complex with an inhibitor.
2019
10.2210/pdb6jij/pdb
pdb_00006jij
100
1
N
CCD
2015-09-02
RAYONIX MX300HE
SINGLE WAVELENGTH
M
x-ray
1
0.97854
1.0
BL17B1
SSRF
0.97854
SYNCHROTRON
SSRF BEAMLINE BL17B1
33059.695
Replicative polyprotein 1ab
3
man
polymer
680.791
02J-ALA-VAL-LEU-PJE-010
3
syn
polymer
18.015
water
11
nat
water
no
no
SGIVKMVSPTSKVEPCIVSVTYGNMTLNGLWLDDKVYCPRHVICSDMTDPDYPNLLCRVTSSDFCVMSGRMSLTVMSYQM
QGCQLVLTVTLQNPNTPKYSFGVVKPGETFTVLAAYNGRPQGAFHVTLRSSHTIKGSFLCGSCGSVGYVLTGDSVRFVYM
HQLELSTGCHTGTDFSGNFYGPYRDAQVVQLPVQDYTQTVNVVAWLYAAIFNRCNWFVQSDSCSLEEFNVWAMTNGFSSI
KADLVLDALASMTGVTVEQVLAAIKRLHSGFQGKQILGSCVFEDELTPSDVYQQLAGVKLQ
SGIVKMVSPTSKVEPCIVSVTYGNMTLNGLWLDDKVYCPRHVICSDMTDPDYPNLLCRVTSSDFCVMSGRMSLTVMSYQM
QGCQLVLTVTLQNPNTPKYSFGVVKPGETFTVLAAYNGRPQGAFHVTLRSSHTIKGSFLCGSCGSVGYVLTGDSVRFVYM
HQLELSTGCHTGTDFSGNFYGPYRDAQVVQLPVQDYTQTVNVVAWLYAAIFNRCNWFVQSDSCSLEEFNVWAMTNGFSSI
KADLVLDALASMTGVTVEQVLAAIKRLHSGFQGKQILGSCVFEDELTPSDVYQQLAGVKLQ
B,C,A
polypeptide(L)
no
yes
(02J)AVL(PJE)(010)
XAVLXX
D,E,F
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MHV-A59
A59
sample
1
301
11142
Murine coronavirus (strain A59)
562
Escherichia coli
Biological sequence
1
2.59
52.42
MICROBATCH
0.1M Sodium acetate trihydrate (pH 4.4-4.6), 8%-10%(w/v) Polyethylene glycol 4,000
291
pdbx_struct_assembly
pdbx_struct_assembly_gen
pdbx_struct_oper_list
struct_site
struct_site_gen
atom_site
chem_comp_atom
chem_comp_bond
database_2
struct_conn
repository
Initial release
Derived calculations
Atomic model
Data collection
Database references
Derived calculations
1
0
2019-04-24
1
1
2020-02-19
2
0
2023-11-15
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.oper_expression
_atom_site.auth_atom_id
_atom_site.label_atom_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_label_atom_id
China
Ministry of Science and Technology (China)
2016YFD0500300
China
Ministry of Science and Technology (China)
2015CB859800
China
National Natural Science Foundation of China
31528006
N
PDBJ
Y
PDBJ
2019-02-21
REL
REL
1
A
O
HOH
505
5.94
HOH
water
32630
synthetic construct
sample
1
6
Inhibitor
N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Peptide-like
HOH
501
3
HOH
HOH
501
B
HOH
502
3
HOH
HOH
502
B
HOH
503
3
HOH
HOH
503
B
HOH
504
3
HOH
HOH
504
B
HOH
501
3
HOH
HOH
501
C
HOH
502
3
HOH
HOH
502
C
HOH
501
3
HOH
HOH
501
A
HOH
502
3
HOH
HOH
502
A
HOH
503
3
HOH
HOH
503
A
HOH
504
3
HOH
HOH
504
A
HOH
505
3
HOH
HOH
505
A
SER
1
n
1
SER
1
B
GLY
2
n
2
GLY
2
B
ILE
3
n
3
ILE
3
B
VAL
4
n
4
VAL
4
B
LYS
5
n
5
LYS
5
B
MET
6
n
6
MET
6
B
VAL
7
n
7
VAL
7
B
SER
8
n
8
SER
8
B
PRO
9
n
9
PRO
9
B
THR
10
n
10
THR
10
B
SER
11
n
11
SER
11
B
LYS
12
n
12
LYS
12
B
VAL
13
n
13
VAL
13
B
GLU
14
n
14
GLU
14
B
PRO
15
n
15
PRO
15
B
CYS
16
n
16
CYS
16
B
ILE
17
n
17
ILE
17
B
VAL
18
n
18
VAL
18
B
SER
19
n
19
SER
19
B
VAL
20
n
20
VAL
20
B
THR
21
n
21
THR
21
B
TYR
22
n
22
TYR
22
B
GLY
23
n
23
GLY
23
B
ASN
24
n
24
ASN
24
B
MET
25
n
25
MET
25
B
THR
26
n
26
THR
26
B
LEU
27
n
27
LEU
27
B
ASN
28
n
28
ASN
28
B
GLY
29
n
29
GLY
29
B
LEU
30
n
30
LEU
30
B
TRP
31
n
31
TRP
31
B
LEU
32
n
32
LEU
32
B
ASP
33
n
33
ASP
33
B
ASP
34
n
34
ASP
34
B
LYS
35
n
35
LYS
35
B
VAL
36
n
36
VAL
36
B
TYR
37
n
37
TYR
37
B
CYS
38
n
38
CYS
38
B
PRO
39
n
39
PRO
39
B
ARG
40
n
40
ARG
40
B
HIS
41
n
41
HIS
41
B
VAL
42
n
42
VAL
42
B
ILE
43
n
43
ILE
43
B
CYS
44
n
44
CYS
44
B
SER
45
n
45
SER
45
B
ASP
46
n
46
ASP
46
B
MET
47
n
47
MET
47
B
THR
48
n
48
THR
48
B
ASP
49
n
49
ASP
49
B
PRO
50
n
50
PRO
50
B
ASP
51
n
51
ASP
51
B
TYR
52
n
52
TYR
52
B
PRO
53
n
53
PRO
53
B
ASN
54
n
54
ASN
54
B
LEU
55
n
55
LEU
55
B
LEU
56
n
56
LEU
56
B
CYS
57
n
57
CYS
57
B
ARG
58
n
58
ARG
58
B
VAL
59
n
59
VAL
59
B
THR
60
n
60
THR
60
B
SER
61
n
61
SER
61
B
SER
62
n
62
SER
62
B
ASP
63
n
63
ASP
63
B
PHE
64
n
64
PHE
64
B
CYS
65
n
65
CYS
65
B
VAL
66
n
66
VAL
66
B
MET
67
n
67
MET
67
B
SER
68
n
68
SER
68
B
GLY
69
n
69
GLY
69
B
ARG
70
n
70
ARG
70
B
MET
71
n
71
MET
71
B
SER
72
n
72
SER
72
B
LEU
73
n
73
LEU
73
B
THR
74
n
74
THR
74
B
VAL
75
n
75
VAL
75
B
MET
76
n
76
MET
76
B
SER
77
n
77
SER
77
B
TYR
78
n
78
TYR
78
B
GLN
79
n
79
GLN
79
B
MET
80
n
80
MET
80
B
GLN
81
n
81
GLN
81
B
GLY
82
n
82
GLY
82
B
CYS
83
n
83
CYS
83
B
GLN
84
n
84
GLN
84
B
LEU
85
n
85
LEU
85
B
VAL
86
n
86
VAL
86
B
LEU
87
n
87
LEU
87
B
THR
88
n
88
THR
88
B
VAL
89
n
89
VAL
89
B
THR
90
n
90
THR
90
B
LEU
91
n
91
LEU
91
B
GLN
92
n
92
GLN
92
B
ASN
93
n
93
ASN
93
B
PRO
94
n
94
PRO
94
B
ASN
95
n
95
ASN
95
B
THR
96
n
96
THR
96
B
PRO
97
n
97
PRO
97
B
LYS
98
n
98
LYS
98
B
TYR
99
n
99
TYR
99
B
SER
100
n
100
SER
100
B
PHE
101
n
101
PHE
101
B
GLY
102
n
102
GLY
102
B
VAL
103
n
103
VAL
103
B
VAL
104
n
104
VAL
104
B
LYS
105
n
105
LYS
105
B
PRO
106
n
106
PRO
106
B
GLY
107
n
107
GLY
107
B
GLU
108
n
108
GLU
108
B
THR
109
n
109
THR
109
B
PHE
110
n
110
PHE
110
B
THR
111
n
111
THR
111
B
VAL
112
n
112
VAL
112
B
LEU
113
n
113
LEU
113
B
ALA
114
n
114
ALA
114
B
ALA
115
n
115
ALA
115
B
TYR
116
n
116
TYR
116
B
ASN
117
n
117
ASN
117
B
GLY
118
n
118
GLY
118
B
ARG
119
n
119
ARG
119
B
PRO
120
n
120
PRO
120
B
GLN
121
n
121
GLN
121
B
GLY
122
n
122
GLY
122
B
ALA
123
n
123
ALA
123
B
PHE
124
n
124
PHE
124
B
HIS
125
n
125
HIS
125
B
VAL
126
n
126
VAL
126
B
THR
127
n
127
THR
127
B
LEU
128
n
128
LEU
128
B
ARG
129
n
129
ARG
129
B
SER
130
n
130
SER
130
B
SER
131
n
131
SER
131
B
HIS
132
n
132
HIS
132
B
THR
133
n
133
THR
133
B
ILE
134
n
134
ILE
134
B
LYS
135
n
135
LYS
135
B
GLY
136
n
136
GLY
136
B
SER
137
n
137
SER
137
B
PHE
138
n
138
PHE
138
B
LEU
139
n
139
LEU
139
B
CYS
140
n
140
CYS
140
B
GLY
141
n
141
GLY
141
B
SER
142
n
142
SER
142
B
CYS
143
n
143
CYS
143
B
GLY
144
n
144
GLY
144
B
SER
145
n
145
SER
145
B
VAL
146
n
146
VAL
146
B
GLY
147
n
147
GLY
147
B
TYR
148
n
148
TYR
148
B
VAL
149
n
149
VAL
149
B
LEU
150
n
150
LEU
150
B
THR
151
n
151
THR
151
B
GLY
152
n
152
GLY
152
B
ASP
153
n
153
ASP
153
B
SER
154
n
154
SER
154
B
VAL
155
n
155
VAL
155
B
ARG
156
n
156
ARG
156
B
PHE
157
n
157
PHE
157
B
VAL
158
n
158
VAL
158
B
TYR
159
n
159
TYR
159
B
MET
160
n
160
MET
160
B
HIS
161
n
161
HIS
161
B
GLN
162
n
162
GLN
162
B
LEU
163
n
163
LEU
163
B
GLU
164
n
164
GLU
164
B
LEU
165
n
165
LEU
165
B
SER
166
n
166
SER
166
B
THR
167
n
167
THR
167
B
GLY
168
n
168
GLY
168
B
CYS
169
n
169
CYS
169
B
HIS
170
n
170
HIS
170
B
THR
171
n
171
THR
171
B
GLY
172
n
172
GLY
172
B
THR
173
n
173
THR
173
B
ASP
174
n
174
ASP
174
B
PHE
175
n
175
PHE
175
B
SER
176
n
176
SER
176
B
GLY
177
n
177
GLY
177
B
ASN
178
n
178
ASN
178
B
PHE
179
n
179
PHE
179
B
TYR
180
n
180
TYR
180
B
GLY
181
n
181
GLY
181
B
PRO
182
n
182
PRO
182
B
TYR
183
n
183
TYR
183
B
ARG
184
n
184
ARG
184
B
ASP
185
n
185
ASP
185
B
ALA
186
n
186
ALA
186
B
GLN
187
n
187
GLN
187
B
VAL
188
n
188
VAL
188
B
VAL
189
n
189
VAL
189
B
GLN
190
n
190
GLN
190
B
LEU
191
n
191
LEU
191
B
PRO
192
n
192
PRO
192
B
VAL
193
n
193
VAL
193
B
GLN
194
n
194
GLN
194
B
ASP
195
n
195
ASP
195
B
TYR
196
n
196
TYR
196
B
THR
197
n
197
THR
197
B
GLN
198
n
198
GLN
198
B
THR
199
n
199
THR
199
B
VAL
200
n
200
VAL
200
B
ASN
201
n
201
ASN
201
B
VAL
202
n
202
VAL
202
B
VAL
203
n
203
VAL
203
B
ALA
204
n
204
ALA
204
B
TRP
205
n
205
TRP
205
B
LEU
206
n
206
LEU
206
B
TYR
207
n
207
TYR
207
B
ALA
208
n
208
ALA
208
B
ALA
209
n
209
ALA
209
B
ILE
210
n
210
ILE
210
B
PHE
211
n
211
PHE
211
B
ASN
212
n
212
ASN
212
B
ARG
213
n
213
ARG
213
B
CYS
214
n
214
CYS
214
B
ASN
215
n
215
ASN
215
B
TRP
216
n
216
TRP
216
B
PHE
217
n
217
PHE
217
B
VAL
218
n
218
VAL
218
B
GLN
219
n
219
GLN
219
B
SER
220
n
220
SER
220
B
ASP
221
n
221
ASP
221
B
SER
222
n
222
SER
222
B
CYS
223
n
223
CYS
223
B
SER
224
n
224
SER
224
B
LEU
225
n
225
LEU
225
B
GLU
226
n
226
GLU
226
B
GLU
227
n
227
GLU
227
B
PHE
228
n
228
PHE
228
B
ASN
229
n
229
ASN
229
B
VAL
230
n
230
VAL
230
B
TRP
231
n
231
TRP
231
B
ALA
232
n
232
ALA
232
B
MET
233
n
233
MET
233
B
THR
234
n
234
THR
234
B
ASN
235
n
235
ASN
235
B
GLY
236
n
236
GLY
236
B
PHE
237
n
237
PHE
237
B
SER
238
n
238
SER
238
B
SER
239
n
239
SER
239
B
ILE
240
n
240
ILE
240
B
LYS
241
n
241
LYS
241
B
ALA
242
n
242
ALA
242
B
ASP
243
n
243
ASP
243
B
LEU
244
n
244
LEU
244
B
VAL
245
n
245
VAL
245
B
LEU
246
n
246
LEU
246
B
ASP
247
n
247
ASP
247
B
ALA
248
n
248
ALA
248
B
LEU
249
n
249
LEU
249
B
ALA
250
n
250
ALA
250
B
SER
251
n
251
SER
251
B
MET
252
n
252
MET
252
B
THR
253
n
253
THR
253
B
GLY
254
n
254
GLY
254
B
VAL
255
n
255
VAL
255
B
THR
256
n
256
THR
256
B
VAL
257
n
257
VAL
257
B
GLU
258
n
258
GLU
258
B
GLN
259
n
259
GLN
259
B
VAL
260
n
260
VAL
260
B
LEU
261
n
261
LEU
261
B
ALA
262
n
262
ALA
262
B
ALA
263
n
263
ALA
263
B
ILE
264
n
264
ILE
264
B
LYS
265
n
265
LYS
265
B
ARG
266
n
266
ARG
266
B
LEU
267
n
267
LEU
267
B
HIS
268
n
268
HIS
268
B
SER
269
n
269
SER
269
B
GLY
270
n
270
GLY
270
B
PHE
271
n
271
PHE
271
B
GLN
272
n
272
GLN
272
B
GLY
273
n
273
GLY
273
B
LYS
274
n
274
LYS
274
B
GLN
275
n
275
GLN
275
B
ILE
276
n
276
ILE
276
B
LEU
277
n
277
LEU
277
B
GLY
278
n
278
GLY
278
B
SER
279
n
279
SER
279
B
CYS
280
n
280
CYS
280
B
VAL
281
n
281
VAL
281
B
PHE
282
n
282
PHE
282
B
GLU
283
n
283
GLU
283
B
ASP
284
n
284
ASP
284
B
GLU
285
n
285
GLU
285
B
LEU
286
n
286
LEU
286
B
THR
287
n
287
THR
287
B
PRO
288
n
288
PRO
288
B
SER
289
n
289
SER
289
B
ASP
290
n
290
ASP
290
B
VAL
291
n
291
VAL
291
B
TYR
292
n
292
TYR
292
B
GLN
293
n
293
GLN
293
B
GLN
294
n
294
GLN
294
B
LEU
295
n
295
LEU
295
B
ALA
296
n
296
ALA
296
B
GLY
297
n
297
GLY
297
B
n
298
298
B
n
299
299
B
n
300
300
B
n
301
301
B
SER
1
n
1
SER
1
C
GLY
2
n
2
GLY
2
C
ILE
3
n
3
ILE
3
C
VAL
4
n
4
VAL
4
C
LYS
5
n
5
LYS
5
C
MET
6
n
6
MET
6
C
VAL
7
n
7
VAL
7
C
SER
8
n
8
SER
8
C
PRO
9
n
9
PRO
9
C
THR
10
n
10
THR
10
C
SER
11
n
11
SER
11
C
LYS
12
n
12
LYS
12
C
VAL
13
n
13
VAL
13
C
GLU
14
n
14
GLU
14
C
PRO
15
n
15
PRO
15
C
CYS
16
n
16
CYS
16
C
ILE
17
n
17
ILE
17
C
VAL
18
n
18
VAL
18
C
SER
19
n
19
SER
19
C
VAL
20
n
20
VAL
20
C
THR
21
n
21
THR
21
C
TYR
22
n
22
TYR
22
C
GLY
23
n
23
GLY
23
C
ASN
24
n
24
ASN
24
C
MET
25
n
25
MET
25
C
THR
26
n
26
THR
26
C
LEU
27
n
27
LEU
27
C
ASN
28
n
28
ASN
28
C
GLY
29
n
29
GLY
29
C
LEU
30
n
30
LEU
30
C
TRP
31
n
31
TRP
31
C
LEU
32
n
32
LEU
32
C
ASP
33
n
33
ASP
33
C
ASP
34
n
34
ASP
34
C
LYS
35
n
35
LYS
35
C
VAL
36
n
36
VAL
36
C
TYR
37
n
37
TYR
37
C
CYS
38
n
38
CYS
38
C
PRO
39
n
39
PRO
39
C
ARG
40
n
40
ARG
40
C
HIS
41
n
41
HIS
41
C
VAL
42
n
42
VAL
42
C
ILE
43
n
43
ILE
43
C
CYS
44
n
44
CYS
44
C
SER
45
n
45
SER
45
C
ASP
46
n
46
ASP
46
C
MET
47
n
47
MET
47
C
THR
48
n
48
THR
48
C
ASP
49
n
49
ASP
49
C
PRO
50
n
50
PRO
50
C
ASP
51
n
51
ASP
51
C
TYR
52
n
52
TYR
52
C
PRO
53
n
53
PRO
53
C
ASN
54
n
54
ASN
54
C
LEU
55
n
55
LEU
55
C
LEU
56
n
56
LEU
56
C
CYS
57
n
57
CYS
57
C
ARG
58
n
58
ARG
58
C
VAL
59
n
59
VAL
59
C
THR
60
n
60
THR
60
C
SER
61
n
61
SER
61
C
SER
62
n
62
SER
62
C
ASP
63
n
63
ASP
63
C
PHE
64
n
64
PHE
64
C
CYS
65
n
65
CYS
65
C
VAL
66
n
66
VAL
66
C
MET
67
n
67
MET
67
C
SER
68
n
68
SER
68
C
GLY
69
n
69
GLY
69
C
ARG
70
n
70
ARG
70
C
MET
71
n
71
MET
71
C
SER
72
n
72
SER
72
C
LEU
73
n
73
LEU
73
C
THR
74
n
74
THR
74
C
VAL
75
n
75
VAL
75
C
MET
76
n
76
MET
76
C
SER
77
n
77
SER
77
C
TYR
78
n
78
TYR
78
C
GLN
79
n
79
GLN
79
C
MET
80
n
80
MET
80
C
GLN
81
n
81
GLN
81
C
GLY
82
n
82
GLY
82
C
CYS
83
n
83
CYS
83
C
GLN
84
n
84
GLN
84
C
LEU
85
n
85
LEU
85
C
VAL
86
n
86
VAL
86
C
LEU
87
n
87
LEU
87
C
THR
88
n
88
THR
88
C
VAL
89
n
89
VAL
89
C
THR
90
n
90
THR
90
C
LEU
91
n
91
LEU
91
C
GLN
92
n
92
GLN
92
C
ASN
93
n
93
ASN
93
C
PRO
94
n
94
PRO
94
C
ASN
95
n
95
ASN
95
C
THR
96
n
96
THR
96
C
PRO
97
n
97
PRO
97
C
LYS
98
n
98
LYS
98
C
TYR
99
n
99
TYR
99
C
SER
100
n
100
SER
100
C
PHE
101
n
101
PHE
101
C
GLY
102
n
102
GLY
102
C
VAL
103
n
103
VAL
103
C
VAL
104
n
104
VAL
104
C
LYS
105
n
105
LYS
105
C
PRO
106
n
106
PRO
106
C
GLY
107
n
107
GLY
107
C
GLU
108
n
108
GLU
108
C
THR
109
n
109
THR
109
C
PHE
110
n
110
PHE
110
C
THR
111
n
111
THR
111
C
VAL
112
n
112
VAL
112
C
LEU
113
n
113
LEU
113
C
ALA
114
n
114
ALA
114
C
ALA
115
n
115
ALA
115
C
TYR
116
n
116
TYR
116
C
ASN
117
n
117
ASN
117
C
GLY
118
n
118
GLY
118
C
ARG
119
n
119
ARG
119
C
PRO
120
n
120
PRO
120
C
GLN
121
n
121
GLN
121
C
GLY
122
n
122
GLY
122
C
ALA
123
n
123
ALA
123
C
PHE
124
n
124
PHE
124
C
HIS
125
n
125
HIS
125
C
VAL
126
n
126
VAL
126
C
THR
127
n
127
THR
127
C
LEU
128
n
128
LEU
128
C
ARG
129
n
129
ARG
129
C
SER
130
n
130
SER
130
C
SER
131
n
131
SER
131
C
HIS
132
n
132
HIS
132
C
THR
133
n
133
THR
133
C
ILE
134
n
134
ILE
134
C
LYS
135
n
135
LYS
135
C
GLY
136
n
136
GLY
136
C
SER
137
n
137
SER
137
C
PHE
138
n
138
PHE
138
C
LEU
139
n
139
LEU
139
C
CYS
140
n
140
CYS
140
C
GLY
141
n
141
GLY
141
C
SER
142
n
142
SER
142
C
CYS
143
n
143
CYS
143
C
GLY
144
n
144
GLY
144
C
SER
145
n
145
SER
145
C
VAL
146
n
146
VAL
146
C
GLY
147
n
147
GLY
147
C
TYR
148
n
148
TYR
148
C
VAL
149
n
149
VAL
149
C
LEU
150
n
150
LEU
150
C
THR
151
n
151
THR
151
C
GLY
152
n
152
GLY
152
C
ASP
153
n
153
ASP
153
C
SER
154
n
154
SER
154
C
VAL
155
n
155
VAL
155
C
ARG
156
n
156
ARG
156
C
PHE
157
n
157
PHE
157
C
VAL
158
n
158
VAL
158
C
TYR
159
n
159
TYR
159
C
MET
160
n
160
MET
160
C
HIS
161
n
161
HIS
161
C
GLN
162
n
162
GLN
162
C
LEU
163
n
163
LEU
163
C
GLU
164
n
164
GLU
164
C
LEU
165
n
165
LEU
165
C
SER
166
n
166
SER
166
C
THR
167
n
167
THR
167
C
GLY
168
n
168
GLY
168
C
CYS
169
n
169
CYS
169
C
HIS
170
n
170
HIS
170
C
THR
171
n
171
THR
171
C
GLY
172
n
172
GLY
172
C
THR
173
n
173
THR
173
C
ASP
174
n
174
ASP
174
C
PHE
175
n
175
PHE
175
C
SER
176
n
176
SER
176
C
GLY
177
n
177
GLY
177
C
ASN
178
n
178
ASN
178
C
PHE
179
n
179
PHE
179
C
TYR
180
n
180
TYR
180
C
GLY
181
n
181
GLY
181
C
PRO
182
n
182
PRO
182
C
TYR
183
n
183
TYR
183
C
ARG
184
n
184
ARG
184
C
ASP
185
n
185
ASP
185
C
ALA
186
n
186
ALA
186
C
GLN
187
n
187
GLN
187
C
VAL
188
n
188
VAL
188
C
VAL
189
n
189
VAL
189
C
GLN
190
n
190
GLN
190
C
LEU
191
n
191
LEU
191
C
PRO
192
n
192
PRO
192
C
VAL
193
n
193
VAL
193
C
GLN
194
n
194
GLN
194
C
ASP
195
n
195
ASP
195
C
TYR
196
n
196
TYR
196
C
THR
197
n
197
THR
197
C
GLN
198
n
198
GLN
198
C
THR
199
n
199
THR
199
C
VAL
200
n
200
VAL
200
C
ASN
201
n
201
ASN
201
C
VAL
202
n
202
VAL
202
C
VAL
203
n
203
VAL
203
C
ALA
204
n
204
ALA
204
C
TRP
205
n
205
TRP
205
C
LEU
206
n
206
LEU
206
C
TYR
207
n
207
TYR
207
C
ALA
208
n
208
ALA
208
C
ALA
209
n
209
ALA
209
C
ILE
210
n
210
ILE
210
C
PHE
211
n
211
PHE
211
C
ASN
212
n
212
ASN
212
C
ARG
213
n
213
ARG
213
C
CYS
214
n
214
CYS
214
C
ASN
215
n
215
ASN
215
C
TRP
216
n
216
TRP
216
C
PHE
217
n
217
PHE
217
C
VAL
218
n
218
VAL
218
C
GLN
219
n
219
GLN
219
C
SER
220
n
220
SER
220
C
ASP
221
n
221
ASP
221
C
SER
222
n
222
SER
222
C
CYS
223
n
223
CYS
223
C
SER
224
n
224
SER
224
C
LEU
225
n
225
LEU
225
C
GLU
226
n
226
GLU
226
C
GLU
227
n
227
GLU
227
C
PHE
228
n
228
PHE
228
C
ASN
229
n
229
ASN
229
C
VAL
230
n
230
VAL
230
C
TRP
231
n
231
TRP
231
C
ALA
232
n
232
ALA
232
C
MET
233
n
233
MET
233
C
THR
234
n
234
THR
234
C
ASN
235
n
235
ASN
235
C
GLY
236
n
236
GLY
236
C
PHE
237
n
237
PHE
237
C
SER
238
n
238
SER
238
C
SER
239
n
239
SER
239
C
ILE
240
n
240
ILE
240
C
LYS
241
n
241
LYS
241
C
ALA
242
n
242
ALA
242
C
ASP
243
n
243
ASP
243
C
LEU
244
n
244
LEU
244
C
VAL
245
n
245
VAL
245
C
LEU
246
n
246
LEU
246
C
ASP
247
n
247
ASP
247
C
ALA
248
n
248
ALA
248
C
LEU
249
n
249
LEU
249
C
ALA
250
n
250
ALA
250
C
SER
251
n
251
SER
251
C
MET
252
n
252
MET
252
C
THR
253
n
253
THR
253
C
GLY
254
n
254
GLY
254
C
VAL
255
n
255
VAL
255
C
THR
256
n
256
THR
256
C
VAL
257
n
257
VAL
257
C
GLU
258
n
258
GLU
258
C
GLN
259
n
259
GLN
259
C
VAL
260
n
260
VAL
260
C
LEU
261
n
261
LEU
261
C
ALA
262
n
262
ALA
262
C
ALA
263
n
263
ALA
263
C
ILE
264
n
264
ILE
264
C
LYS
265
n
265
LYS
265
C
ARG
266
n
266
ARG
266
C
LEU
267
n
267
LEU
267
C
HIS
268
n
268
HIS
268
C
SER
269
n
269
SER
269
C
GLY
270
n
270
GLY
270
C
PHE
271
n
271
PHE
271
C
GLN
272
n
272
GLN
272
C
GLY
273
n
273
GLY
273
C
LYS
274
n
274
LYS
274
C
GLN
275
n
275
GLN
275
C
ILE
276
n
276
ILE
276
C
LEU
277
n
277
LEU
277
C
GLY
278
n
278
GLY
278
C
SER
279
n
279
SER
279
C
CYS
280
n
280
CYS
280
C
VAL
281
n
281
VAL
281
C
PHE
282
n
282
PHE
282
C
GLU
283
n
283
GLU
283
C
ASP
284
n
284
ASP
284
C
GLU
285
n
285
GLU
285
C
LEU
286
n
286
LEU
286
C
THR
287
n
287
THR
287
C
PRO
288
n
288
PRO
288
C
SER
289
n
289
SER
289
C
ASP
290
n
290
ASP
290
C
VAL
291
n
291
VAL
291
C
TYR
292
n
292
TYR
292
C
GLN
293
n
293
GLN
293
C
GLN
294
n
294
GLN
294
C
LEU
295
n
295
LEU
295
C
ALA
296
n
296
ALA
296
C
GLY
297
n
297
GLY
297
C
VAL
298
n
298
VAL
298
C
n
299
299
C
n
300
300
C
n
301
301
C
SER
1
n
1
SER
1
A
GLY
2
n
2
GLY
2
A
ILE
3
n
3
ILE
3
A
VAL
4
n
4
VAL
4
A
LYS
5
n
5
LYS
5
A
MET
6
n
6
MET
6
A
VAL
7
n
7
VAL
7
A
SER
8
n
8
SER
8
A
PRO
9
n
9
PRO
9
A
THR
10
n
10
THR
10
A
SER
11
n
11
SER
11
A
LYS
12
n
12
LYS
12
A
VAL
13
n
13
VAL
13
A
GLU
14
n
14
GLU
14
A
PRO
15
n
15
PRO
15
A
CYS
16
n
16
CYS
16
A
ILE
17
n
17
ILE
17
A
VAL
18
n
18
VAL
18
A
SER
19
n
19
SER
19
A
VAL
20
n
20
VAL
20
A
THR
21
n
21
THR
21
A
TYR
22
n
22
TYR
22
A
GLY
23
n
23
GLY
23
A
ASN
24
n
24
ASN
24
A
MET
25
n
25
MET
25
A
THR
26
n
26
THR
26
A
LEU
27
n
27
LEU
27
A
ASN
28
n
28
ASN
28
A
GLY
29
n
29
GLY
29
A
LEU
30
n
30
LEU
30
A
TRP
31
n
31
TRP
31
A
LEU
32
n
32
LEU
32
A
ASP
33
n
33
ASP
33
A
ASP
34
n
34
ASP
34
A
LYS
35
n
35
LYS
35
A
VAL
36
n
36
VAL
36
A
TYR
37
n
37
TYR
37
A
CYS
38
n
38
CYS
38
A
PRO
39
n
39
PRO
39
A
ARG
40
n
40
ARG
40
A
HIS
41
n
41
HIS
41
A
VAL
42
n
42
VAL
42
A
ILE
43
n
43
ILE
43
A
CYS
44
n
44
CYS
44
A
SER
45
n
45
SER
45
A
ASP
46
n
46
ASP
46
A
MET
47
n
47
MET
47
A
THR
48
n
48
THR
48
A
ASP
49
n
49
ASP
49
A
PRO
50
n
50
PRO
50
A
ASP
51
n
51
ASP
51
A
TYR
52
n
52
TYR
52
A
PRO
53
n
53
PRO
53
A
ASN
54
n
54
ASN
54
A
LEU
55
n
55
LEU
55
A
LEU
56
n
56
LEU
56
A
CYS
57
n
57
CYS
57
A
ARG
58
n
58
ARG
58
A
VAL
59
n
59
VAL
59
A
THR
60
n
60
THR
60
A
SER
61
n
61
SER
61
A
SER
62
n
62
SER
62
A
ASP
63
n
63
ASP
63
A
PHE
64
n
64
PHE
64
A
CYS
65
n
65
CYS
65
A
VAL
66
n
66
VAL
66
A
MET
67
n
67
MET
67
A
SER
68
n
68
SER
68
A
GLY
69
n
69
GLY
69
A
ARG
70
n
70
ARG
70
A
MET
71
n
71
MET
71
A
SER
72
n
72
SER
72
A
LEU
73
n
73
LEU
73
A
THR
74
n
74
THR
74
A
VAL
75
n
75
VAL
75
A
MET
76
n
76
MET
76
A
SER
77
n
77
SER
77
A
TYR
78
n
78
TYR
78
A
GLN
79
n
79
GLN
79
A
MET
80
n
80
MET
80
A
GLN
81
n
81
GLN
81
A
GLY
82
n
82
GLY
82
A
CYS
83
n
83
CYS
83
A
GLN
84
n
84
GLN
84
A
LEU
85
n
85
LEU
85
A
VAL
86
n
86
VAL
86
A
LEU
87
n
87
LEU
87
A
THR
88
n
88
THR
88
A
VAL
89
n
89
VAL
89
A
THR
90
n
90
THR
90
A
LEU
91
n
91
LEU
91
A
GLN
92
n
92
GLN
92
A
ASN
93
n
93
ASN
93
A
PRO
94
n
94
PRO
94
A
ASN
95
n
95
ASN
95
A
THR
96
n
96
THR
96
A
PRO
97
n
97
PRO
97
A
LYS
98
n
98
LYS
98
A
TYR
99
n
99
TYR
99
A
SER
100
n
100
SER
100
A
PHE
101
n
101
PHE
101
A
GLY
102
n
102
GLY
102
A
VAL
103
n
103
VAL
103
A
VAL
104
n
104
VAL
104
A
LYS
105
n
105
LYS
105
A
PRO
106
n
106
PRO
106
A
GLY
107
n
107
GLY
107
A
GLU
108
n
108
GLU
108
A
THR
109
n
109
THR
109
A
PHE
110
n
110
PHE
110
A
THR
111
n
111
THR
111
A
VAL
112
n
112
VAL
112
A
LEU
113
n
113
LEU
113
A
ALA
114
n
114
ALA
114
A
ALA
115
n
115
ALA
115
A
TYR
116
n
116
TYR
116
A
ASN
117
n
117
ASN
117
A
GLY
118
n
118
GLY
118
A
ARG
119
n
119
ARG
119
A
PRO
120
n
120
PRO
120
A
GLN
121
n
121
GLN
121
A
GLY
122
n
122
GLY
122
A
ALA
123
n
123
ALA
123
A
PHE
124
n
124
PHE
124
A
HIS
125
n
125
HIS
125
A
VAL
126
n
126
VAL
126
A
THR
127
n
127
THR
127
A
LEU
128
n
128
LEU
128
A
ARG
129
n
129
ARG
129
A
SER
130
n
130
SER
130
A
SER
131
n
131
SER
131
A
HIS
132
n
132
HIS
132
A
THR
133
n
133
THR
133
A
ILE
134
n
134
ILE
134
A
LYS
135
n
135
LYS
135
A
GLY
136
n
136
GLY
136
A
SER
137
n
137
SER
137
A
PHE
138
n
138
PHE
138
A
LEU
139
n
139
LEU
139
A
CYS
140
n
140
CYS
140
A
GLY
141
n
141
GLY
141
A
SER
142
n
142
SER
142
A
CYS
143
n
143
CYS
143
A
GLY
144
n
144
GLY
144
A
SER
145
n
145
SER
145
A
VAL
146
n
146
VAL
146
A
GLY
147
n
147
GLY
147
A
TYR
148
n
148
TYR
148
A
VAL
149
n
149
VAL
149
A
LEU
150
n
150
LEU
150
A
THR
151
n
151
THR
151
A
GLY
152
n
152
GLY
152
A
ASP
153
n
153
ASP
153
A
SER
154
n
154
SER
154
A
VAL
155
n
155
VAL
155
A
ARG
156
n
156
ARG
156
A
PHE
157
n
157
PHE
157
A
VAL
158
n
158
VAL
158
A
TYR
159
n
159
TYR
159
A
MET
160
n
160
MET
160
A
HIS
161
n
161
HIS
161
A
GLN
162
n
162
GLN
162
A
LEU
163
n
163
LEU
163
A
GLU
164
n
164
GLU
164
A
LEU
165
n
165
LEU
165
A
SER
166
n
166
SER
166
A
THR
167
n
167
THR
167
A
GLY
168
n
168
GLY
168
A
CYS
169
n
169
CYS
169
A
HIS
170
n
170
HIS
170
A
THR
171
n
171
THR
171
A
GLY
172
n
172
GLY
172
A
THR
173
n
173
THR
173
A
ASP
174
n
174
ASP
174
A
PHE
175
n
175
PHE
175
A
SER
176
n
176
SER
176
A
GLY
177
n
177
GLY
177
A
ASN
178
n
178
ASN
178
A
PHE
179
n
179
PHE
179
A
TYR
180
n
180
TYR
180
A
GLY
181
n
181
GLY
181
A
PRO
182
n
182
PRO
182
A
TYR
183
n
183
TYR
183
A
ARG
184
n
184
ARG
184
A
ASP
185
n
185
ASP
185
A
ALA
186
n
186
ALA
186
A
GLN
187
n
187
GLN
187
A
VAL
188
n
188
VAL
188
A
VAL
189
n
189
VAL
189
A
GLN
190
n
190
GLN
190
A
LEU
191
n
191
LEU
191
A
PRO
192
n
192
PRO
192
A
VAL
193
n
193
VAL
193
A
GLN
194
n
194
GLN
194
A
ASP
195
n
195
ASP
195
A
TYR
196
n
196
TYR
196
A
THR
197
n
197
THR
197
A
GLN
198
n
198
GLN
198
A
THR
199
n
199
THR
199
A
VAL
200
n
200
VAL
200
A
ASN
201
n
201
ASN
201
A
VAL
202
n
202
VAL
202
A
VAL
203
n
203
VAL
203
A
ALA
204
n
204
ALA
204
A
TRP
205
n
205
TRP
205
A
LEU
206
n
206
LEU
206
A
TYR
207
n
207
TYR
207
A
ALA
208
n
208
ALA
208
A
ALA
209
n
209
ALA
209
A
ILE
210
n
210
ILE
210
A
PHE
211
n
211
PHE
211
A
ASN
212
n
212
ASN
212
A
ARG
213
n
213
ARG
213
A
CYS
214
n
214
CYS
214
A
ASN
215
n
215
ASN
215
A
TRP
216
n
216
TRP
216
A
PHE
217
n
217
PHE
217
A
VAL
218
n
218
VAL
218
A
GLN
219
n
219
GLN
219
A
SER
220
n
220
SER
220
A
ASP
221
n
221
ASP
221
A
SER
222
n
222
SER
222
A
CYS
223
n
223
CYS
223
A
SER
224
n
224
SER
224
A
LEU
225
n
225
LEU
225
A
GLU
226
n
226
GLU
226
A
GLU
227
n
227
GLU
227
A
PHE
228
n
228
PHE
228
A
ASN
229
n
229
ASN
229
A
VAL
230
n
230
VAL
230
A
TRP
231
n
231
TRP
231
A
ALA
232
n
232
ALA
232
A
MET
233
n
233
MET
233
A
THR
234
n
234
THR
234
A
ASN
235
n
235
ASN
235
A
GLY
236
n
236
GLY
236
A
PHE
237
n
237
PHE
237
A
SER
238
n
238
SER
238
A
SER
239
n
239
SER
239
A
ILE
240
n
240
ILE
240
A
LYS
241
n
241
LYS
241
A
ALA
242
n
242
ALA
242
A
ASP
243
n
243
ASP
243
A
LEU
244
n
244
LEU
244
A
VAL
245
n
245
VAL
245
A
LEU
246
n
246
LEU
246
A
ASP
247
n
247
ASP
247
A
ALA
248
n
248
ALA
248
A
LEU
249
n
249
LEU
249
A
ALA
250
n
250
ALA
250
A
SER
251
n
251
SER
251
A
MET
252
n
252
MET
252
A
THR
253
n
253
THR
253
A
GLY
254
n
254
GLY
254
A
VAL
255
n
255
VAL
255
A
THR
256
n
256
THR
256
A
VAL
257
n
257
VAL
257
A
GLU
258
n
258
GLU
258
A
GLN
259
n
259
GLN
259
A
VAL
260
n
260
VAL
260
A
LEU
261
n
261
LEU
261
A
ALA
262
n
262
ALA
262
A
ALA
263
n
263
ALA
263
A
ILE
264
n
264
ILE
264
A
LYS
265
n
265
LYS
265
A
ARG
266
n
266
ARG
266
A
LEU
267
n
267
LEU
267
A
HIS
268
n
268
HIS
268
A
SER
269
n
269
SER
269
A
GLY
270
n
270
GLY
270
A
PHE
271
n
271
PHE
271
A
GLN
272
n
272
GLN
272
A
GLY
273
n
273
GLY
273
A
LYS
274
n
274
LYS
274
A
GLN
275
n
275
GLN
275
A
ILE
276
n
276
ILE
276
A
LEU
277
n
277
LEU
277
A
GLY
278
n
278
GLY
278
A
SER
279
n
279
SER
279
A
CYS
280
n
280
CYS
280
A
VAL
281
n
281
VAL
281
A
PHE
282
n
282
PHE
282
A
GLU
283
n
283
GLU
283
A
ASP
284
n
284
ASP
284
A
GLU
285
n
285
GLU
285
A
LEU
286
n
286
LEU
286
A
THR
287
n
287
THR
287
A
PRO
288
n
288
PRO
288
A
SER
289
n
289
SER
289
A
ASP
290
n
290
ASP
290
A
VAL
291
n
291
VAL
291
A
TYR
292
n
292
TYR
292
A
GLN
293
n
293
GLN
293
A
GLN
294
n
294
GLN
294
A
LEU
295
n
295
LEU
295
A
ALA
296
n
296
ALA
296
A
GLY
297
n
297
GLY
297
A
n
298
298
A
n
299
299
A
n
300
300
A
n
301
301
A
02J
1
n
1
02J
1
D
ALA
2
n
2
ALA
2
D
VAL
3
n
3
VAL
3
D
LEU
4
n
4
LEU
4
D
PJE
5
n
5
PJE
5
D
010
6
n
6
010
6
D
02J
1
n
1
02J
1
E
ALA
2
n
2
ALA
2
E
VAL
3
n
3
VAL
3
E
LEU
4
n
4
LEU
4
E
PJE
5
n
5
PJE
5
E
010
6
n
6
010
6
E
02J
1
n
1
02J
1
F
ALA
2
n
2
ALA
2
F
VAL
3
n
3
VAL
3
F
LEU
4
n
4
LEU
4
F
PJE
5
n
5
PJE
5
F
010
6
n
6
010
6
F
author_defined_assembly
4
tetrameric
author_defined_assembly
4
tetrameric
gel filtration
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_656
-x+1,y,-z+1
crystal symmetry operation
98.5059405649
0.0000000000
95.4622700995
B
O
LEU
73
A
O
LEU
73
B
N
VAL
66
A
N
VAL
66
B
O
MET
67
A
O
MET
67
B
N
SER
19
A
N
SER
19
B
N
VAL
18
A
N
VAL
18
B
O
GLY
29
A
O
GLY
29
B
N
LEU
32
A
N
LEU
32
B
O
LYS
35
A
O
LYS
35
B
N
CYS
38
A
N
CYS
38
B
O
LEU
85
A
O
LEU
85
B
O
THR
88
A
O
THR
88
B
N
MET
76
A
N
MET
76
B
N
SER
100
A
N
SER
100
B
O
VAL
155
A
O
VAL
155
B
O
SER
154
A
O
SER
154
B
N
THR
151
A
N
THR
151
B
O
VAL
146
A
O
VAL
146
B
N
LEU
113
A
N
LEU
113
B
N
ALA
114
A
N
ALA
114
B
O
GLN
121
A
O
GLN
121
B
N
SER
100
A
N
SER
100
B
O
VAL
155
A
O
VAL
155
B
N
LEU
163
A
N
LEU
163
B
O
THR
171
A
O
THR
171
C
O
MET
71
B
O
MET
71
C
N
SER
68
B
N
SER
68
C
O
CYS
65
B
O
CYS
65
C
N
THR
21
B
N
THR
21
C
N
VAL
18
B
N
VAL
18
C
O
GLY
29
B
O
GLY
29
C
N
LEU
32
B
N
LEU
32
C
O
LYS
35
B
O
LYS
35
C
N
CYS
38
B
N
CYS
38
C
O
LEU
85
B
O
LEU
85
C
O
THR
88
B
O
THR
88
C
N
SER
77
B
N
SER
77
C
O
MET
71
B
O
MET
71
C
N
SER
68
B
N
SER
68
C
O
CYS
65
B
O
CYS
65
C
N
THR
21
B
N
THR
21
C
N
VAL
18
B
N
VAL
18
C
O
GLY
29
B
O
GLY
29
C
N
LEU
32
B
N
LEU
32
C
O
LYS
35
B
O
LYS
35
C
N
CYS
38
B
N
CYS
38
C
O
LEU
85
B
O
LEU
85
C
O
GLN
84
B
O
GLN
84
C
N
GLN
81
B
N
GLN
81
C
N
SER
100
B
N
SER
100
C
O
VAL
155
B
O
VAL
155
C
O
ARG
156
B
O
ARG
156
C
N
VAL
149
B
N
VAL
149
C
O
TYR
148
B
O
TYR
148
C
N
THR
111
B
N
THR
111
C
N
ALA
114
B
N
ALA
114
C
O
GLN
121
B
O
GLN
121
C
N
SER
100
B
N
SER
100
C
O
VAL
155
B
O
VAL
155
C
N
MET
160
B
N
MET
160
C
O
THR
173
B
O
THR
173
A
O
LEU
73
C
O
LEU
73
A
N
VAL
66
C
N
VAL
66
A
O
CYS
65
C
O
CYS
65
A
N
THR
21
C
N
THR
21
A
N
VAL
18
C
N
VAL
18
A
O
GLY
29
C
O
GLY
29
A
N
LEU
32
C
N
LEU
32
A
O
LYS
35
C
O
LYS
35
A
N
CYS
38
C
N
CYS
38
A
O
LEU
85
C
O
LEU
85
A
O
GLN
84
C
O
GLN
84
A
N
GLN
81
C
N
GLN
81
A
N
SER
100
C
N
SER
100
A
O
VAL
155
C
O
VAL
155
A
O
VAL
158
C
O
VAL
158
A
N
GLY
147
C
N
GLY
147
A
O
TYR
148
C
O
TYR
148
A
N
THR
111
C
N
THR
111
A
N
ALA
114
C
N
ALA
114
A
O
GLN
121
C
O
GLN
121
A
N
SER
100
C
N
SER
100
A
O
VAL
155
C
O
VAL
155
A
N
MET
160
C
N
MET
160
A
O
THR
173
C
O
THR
173
1
B
VAL
298
A
VAL
298
1
Y
1
B
LYS
299
A
LYS
299
1
Y
1
B
LEU
300
A
LEU
300
1
Y
1
B
GLN
301
A
GLN
301
1
Y
1
C
LYS
299
B
LYS
299
1
Y
1
C
LEU
300
B
LEU
300
1
Y
1
C
GLN
301
B
GLN
301
1
Y
1
A
VAL
298
C
VAL
298
1
Y
1
A
LYS
299
C
LYS
299
1
Y
1
A
LEU
300
C
LEU
300
1
Y
1
A
GLN
301
C
GLN
301
1
Y
1
C
E
SG
C20
CYS
PJE
143
5
1.76
1
B
D
SG
C20
CYS
PJE
143
5
1.77
1
A
F
SG
C20
CYS
PJE
143
5
1.77
1
B
A
OG
O
SER
PHE
1
138
2.04
1
17.38
2.30
115.30
132.68
B
B
B
CA
CB
CG
LEU
LEU
LEU
244
244
244
N
1
D
D
C
N
VAL
LEU
3
4
0.144
0.023
1.336
1.480
Y
1
E
E
C
N
VAL
LEU
3
4
0.142
0.023
1.336
1.478
Y
1
F
F
C
N
VAL
LEU
3
4
0.148
0.023
1.336
1.484
Y
1
B
F
CD1
C3
LEU
010
244
6
1.50
1_555
2_555
1
B
F
CD1
C2
LEU
010
244
6
1.76
1_555
2_555
1
B
ASP
33
54.98
-121.17
1
B
CYS
44
-101.13
-79.59
1
B
SER
45
77.82
-31.42
1
B
ASP
46
-93.83
34.86
1
B
MET
47
59.48
-177.07
1
B
THR
48
42.47
-124.79
1
B
GLN
162
-142.21
-36.41
1
B
GLN
187
-83.27
42.94
1
B
ARG
213
66.04
-63.32
1
B
ASN
215
-142.77
22.07
1
B
ALA
296
-129.47
-71.08
1
C
ASP
33
58.43
-118.57
1
C
MET
47
74.57
157.04
1
C
ASP
49
-151.86
77.40
1
C
ASP
51
-101.02
58.98
1
C
GLN
162
-142.29
-29.65
1
C
PRO
182
-91.04
46.50
1
C
GLN
187
-85.62
46.54
1
C
ASN
212
-98.89
31.14
1
A
ASP
33
57.66
-120.54
1
A
CYS
44
-91.14
-81.13
1
A
SER
45
63.94
-3.94
1
A
MET
47
58.87
178.18
1
A
THR
48
44.80
-114.34
1
A
ASP
51
-114.78
69.75
1
A
THR
151
-105.81
71.61
1
A
GLN
162
-144.20
-30.19
1
A
SER
269
-93.55
31.40
1
A
ALA
296
-128.74
-57.38
0.270
0.226
0.229
2.65
36.96
1502
29710
5.060
99.3
0.380
1
FREE R-VALUE
1.370
MOLECULAR REPLACEMENT
31.250
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
2.65
36.96
11
7002
0
0
6991
0.004
7156
0.772
9736
13.557
4126
0.050
1109
0.004
1243
0.3862
0.3087
2.7304
123
2435
95.00
0.3456
0.2936
2.8279
126
2564
99.00
0.3615
0.2764
2.9411
140
2536
100.00
0.3062
0.2895
3.0749
137
2576
100.00
0.2901
0.2756
3.2369
131
2569
100.00
0.3222
0.2797
3.4396
145
2555
100.00
0.3002
0.2543
3.7049
116
2586
100.00
0.2692
0.2303
4.0774
150
2585
100.00
0.2636
0.1927
4.6664
131
2568
100.00
0.2445
0.1954
5.8753
145
2589
100.00
0.2045
0.1782
36.9647
158
2645
99.00
2.650
50.000
6JIJ
29741
1
15.2000
3.300
99.7
2.65
2.70
1
refinement
PHENIX
(1.14_3260: ???)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
N
The Crystal Structure of Main Protease from Mouse Hepatitis Virus A59 in Complex with an inhibitor
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
B
VAL
13
A
VAL
13
HELX_P
B
PRO
15
A
PRO
15
5
AA1
3
B
HIS
41
A
HIS
41
HELX_P
B
CYS
44
A
CYS
44
5
AA2
4
B
ASP
51
A
ASP
51
HELX_P
B
VAL
59
A
VAL
59
1
AA3
9
B
THR
60
A
THR
60
HELX_P
B
PHE
64
A
PHE
64
5
AA4
5
B
GLN
198
A
GLN
198
HELX_P
B
ASN
212
A
ASN
212
1
AA5
15
B
SER
224
A
SER
224
HELX_P
B
MET
233
A
MET
233
1
AA6
10
B
ASP
243
A
ASP
243
HELX_P
B
GLY
254
A
GLY
254
1
AA7
12
B
THR
256
A
THR
256
HELX_P
B
HIS
268
A
HIS
268
1
AA8
13
B
THR
287
A
THR
287
HELX_P
B
ALA
296
A
ALA
296
1
AA9
10
C
VAL
13
B
VAL
13
HELX_P
C
PRO
15
B
PRO
15
5
AB1
3
C
HIS
41
B
HIS
41
HELX_P
C
CYS
44
B
CYS
44
5
AB2
4
C
ASP
51
B
ASP
51
HELX_P
C
LEU
56
B
LEU
56
1
AB3
6
C
CYS
57
B
CYS
57
HELX_P
C
VAL
59
B
VAL
59
5
AB4
3
C
THR
60
B
THR
60
HELX_P
C
SER
62
B
SER
62
5
AB5
3
C
GLN
198
B
GLN
198
HELX_P
C
ASN
212
B
ASN
212
1
AB6
15
C
SER
224
B
SER
224
HELX_P
C
MET
233
B
MET
233
1
AB7
10
C
ASP
243
B
ASP
243
HELX_P
C
GLY
254
B
GLY
254
1
AB8
12
C
THR
256
B
THR
256
HELX_P
C
LEU
267
B
LEU
267
1
AB9
12
C
THR
287
B
THR
287
HELX_P
C
ALA
296
B
ALA
296
1
AC1
10
A
VAL
13
C
VAL
13
HELX_P
A
PRO
15
C
PRO
15
5
AC2
3
A
HIS
41
C
HIS
41
HELX_P
A
CYS
44
C
CYS
44
5
AC3
4
A
ASP
51
C
ASP
51
HELX_P
A
VAL
59
C
VAL
59
1
AC4
9
A
THR
60
C
THR
60
HELX_P
A
SER
62
C
SER
62
5
AC5
3
A
GLN
198
C
GLN
198
HELX_P
A
ASN
212
C
ASN
212
1
AC6
15
A
SER
224
C
SER
224
HELX_P
A
MET
233
C
MET
233
1
AC7
10
A
ASP
243
C
ASP
243
HELX_P
A
GLY
254
C
GLY
254
1
AC8
12
A
THR
256
C
THR
256
HELX_P
A
HIS
268
C
HIS
268
1
AC9
13
A
THR
287
C
THR
287
HELX_P
A
GLN
294
C
GLN
294
1
AD1
8
covale
1.450
both
D
02J
1
D
C
02J
1
1_555
D
ALA
2
D
N
ALA
2
1_555
covale
1.461
both
D
LEU
4
D
C
LEU
4
1_555
D
PJE
5
D
N
PJE
5
1_555
covale
1.426
both
D
PJE
5
D
C
PJE
5
1_555
D
010
6
D
O
010
6
1_555
covale
1.453
both
E
02J
1
E
C
02J
1
1_555
E
ALA
2
E
N
ALA
2
1_555
covale
1.462
both
E
LEU
4
E
C
LEU
4
1_555
E
PJE
5
E
N
PJE
5
1_555
covale
1.435
both
E
PJE
5
E
C
PJE
5
1_555
E
010
6
E
O
010
6
1_555
covale
1.454
both
F
02J
1
F
C
02J
1
1_555
F
ALA
2
F
N
ALA
2
1_555
covale
1.456
both
F
LEU
4
F
C
LEU
4
1_555
F
PJE
5
F
N
PJE
5
1_555
covale
1.424
both
F
PJE
5
F
C
PJE
5
1_555
F
010
6
F
O
010
6
1_555
HYDRALASE/INHIBITOR
Main Protease, Mouse Hepatitis Virus A59, HYDRALASE-INHIBITOR complex
Q66WN6_CVMA5
UNP
1
3334
Q66WN6
SGIVKMVSPTSKVEPCIVSVTYGNMTLNGLWLDDKVYCPRHVICSSADMTDPDYPNLLCRVTSSDFCVMSGRMSLTVMSY
QMQGCQLVLTVTLQNPNTPKYSFGVVKPGETFTVLAAYNGRPQGAFHVTLRSSHTIKGSFLCGSCGSVGYVLTGDSVRFV
YMHQLELSTGCHTGTDFSGNFYGPYRDAQVVQLPVQDYTQTVNVVAWLYAAIFNRCNWFVQSDSCSLEEFNVWAMTNGFS
SIKADLVLDALASMTGVTVEQVLAAIKRLHSGFQGKQILGSCVLEDELTPSDVYQQLAGVKLQ
6JIJ
PDB
2
1
6JIJ
3334
3636
6JIJ
1
301
Q66WN6
B
1
1
301
3334
3636
6JIJ
1
301
Q66WN6
C
1
1
301
3334
3636
6JIJ
1
301
Q66WN6
A
1
1
301
1
6
6JIJ
1
6
6JIJ
D
2
1
6
1
6
6JIJ
1
6
6JIJ
E
2
1
6
1
6
6JIJ
1
6
6JIJ
F
2
1
6
1
SER
deletion
6JIJ
B
Q66WN6
UNP
3379
1
ALA
deletion
6JIJ
B
Q66WN6
UNP
3380
1
LEU
conflict
PHE
282
6JIJ
B
Q66WN6
UNP
3617
282
2
SER
deletion
6JIJ
C
Q66WN6
UNP
3379
2
ALA
deletion
6JIJ
C
Q66WN6
UNP
3380
2
LEU
conflict
PHE
282
6JIJ
C
Q66WN6
UNP
3617
282
3
SER
deletion
6JIJ
A
Q66WN6
UNP
3379
3
ALA
deletion
6JIJ
A
Q66WN6
UNP
3380
3
LEU
conflict
PHE
282
6JIJ
A
Q66WN6
UNP
3617
282
7
5
3
7
7
5
3
7
5
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
B
MET
71
A
MET
71
B
LEU
73
A
LEU
73
B
CYS
65
A
CYS
65
B
SER
68
A
SER
68
B
ILE
17
A
ILE
17
B
TYR
22
A
TYR
22
B
MET
25
A
MET
25
B
LEU
32
A
LEU
32
B
LYS
35
A
LYS
35
B
PRO
39
A
PRO
39
B
GLN
84
A
GLN
84
B
VAL
89
A
VAL
89
B
VAL
75
A
VAL
75
B
GLN
81
A
GLN
81
B
TYR
99
A
TYR
99
B
PHE
101
A
PHE
101
B
SER
154
A
SER
154
B
SER
166
A
SER
166
B
VAL
146
A
VAL
146
B
THR
151
A
THR
151
B
THR
109
A
THR
109
B
TYR
116
A
TYR
116
B
ARG
119
A
ARG
119
B
THR
127
A
THR
127
B
TYR
99
A
TYR
99
B
PHE
101
A
PHE
101
B
SER
154
A
SER
154
B
SER
166
A
SER
166
B
CYS
169
A
CYS
169
B
THR
173
A
THR
173
C
MET
71
B
MET
71
C
LEU
73
B
LEU
73
C
PHE
64
B
PHE
64
C
SER
68
B
SER
68
C
ILE
17
B
ILE
17
C
TYR
22
B
TYR
22
C
MET
25
B
MET
25
C
LEU
32
B
LEU
32
C
LYS
35
B
LYS
35
C
PRO
39
B
PRO
39
C
GLN
84
B
GLN
84
C
VAL
89
B
VAL
89
C
VAL
75
B
VAL
75
C
SER
77
B
SER
77
C
MET
71
B
MET
71
C
LEU
73
B
LEU
73
C
PHE
64
B
PHE
64
C
SER
68
B
SER
68
C
ILE
17
B
ILE
17
C
TYR
22
B
TYR
22
C
MET
25
B
MET
25
C
LEU
32
B
LEU
32
C
LYS
35
B
LYS
35
C
PRO
39
B
PRO
39
C
GLN
84
B
GLN
84
C
VAL
89
B
VAL
89
C
MET
80
B
MET
80
C
GLN
81
B
GLN
81
C
TYR
99
B
TYR
99
C
PHE
101
B
PHE
101
C
VAL
155
B
VAL
155
C
SER
166
B
SER
166
C
VAL
146
B
VAL
146
C
LEU
150
B
LEU
150
C
THR
109
B
THR
109
C
TYR
116
B
TYR
116
C
ARG
119
B
ARG
119
C
THR
127
B
THR
127
C
TYR
99
B
TYR
99
C
PHE
101
B
PHE
101
C
VAL
155
B
VAL
155
C
SER
166
B
SER
166
C
CYS
169
B
CYS
169
C
THR
173
B
THR
173
A
MET
71
C
MET
71
A
LEU
73
C
LEU
73
A
PHE
64
C
PHE
64
A
SER
68
C
SER
68
A
ILE
17
C
ILE
17
A
TYR
22
C
TYR
22
A
MET
25
C
MET
25
A
LEU
32
C
LEU
32
A
LYS
35
C
LYS
35
A
PRO
39
C
PRO
39
A
GLN
84
C
GLN
84
A
THR
88
C
THR
88
A
MET
80
C
MET
80
A
GLN
81
C
GLN
81
A
TYR
99
C
TYR
99
A
PHE
101
C
PHE
101
A
SER
154
C
SER
154
A
SER
166
C
SER
166
A
VAL
146
C
VAL
146
A
THR
151
C
THR
151
A
THR
109
C
THR
109
A
TYR
116
C
TYR
116
A
ARG
119
C
ARG
119
A
THR
127
C
THR
127
A
TYR
99
C
TYR
99
A
PHE
101
C
PHE
101
A
SER
154
C
SER
154
A
SER
166
C
SER
166
A
CYS
169
C
CYS
169
A
THR
173
C
THR
173
binding site for "N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
D
02J
1
CHAIN
16
20
14
B
MET
25
A
MET
25
16
1_555
B
HIS
41
A
HIS
41
16
1_555
B
PHE
138
A
PHE
138
16
1_555
B
LEU
139
A
LEU
139
16
1_555
B
GLY
141
A
GLY
141
16
1_555
B
SER
142
A
SER
142
16
1_555
B
CYS
143
A
CYS
143
16
1_555
B
HIS
161
A
HIS
161
16
1_555
B
GLN
162
A
GLN
162
16
1_555
B
LEU
163
A
LEU
163
16
1_555
B
GLU
164
A
GLU
164
16
1_555
B
HIS
170
A
HIS
170
16
1_555
B
GLN
187
A
GLN
187
16
1_555
B
VAL
188
A
VAL
188
16
1_555
B
VAL
189
A
VAL
189
16
1_555
E
010
6
E
010
6
16
2_656
B
ASP
46
A
ASP
46
20
2_656
B
MET
47
A
MET
47
20
2_656
C
MET
25
B
MET
25
20
1_555
C
HIS
41
B
HIS
41
20
1_555
C
TYR
52
B
TYR
52
20
1_555
C
PHE
138
B
PHE
138
20
1_555
C
LEU
139
B
LEU
139
20
1_555
C
CYS
140
B
CYS
140
20
1_555
C
GLY
141
B
GLY
141
20
1_555
C
CYS
143
B
CYS
143
20
1_555
C
HIS
161
B
HIS
161
20
1_555
C
GLN
162
B
GLN
162
20
1_555
C
LEU
163
B
LEU
163
20
1_555
C
GLU
164
B
GLU
164
20
1_555
C
HIS
170
B
HIS
170
20
1_555
C
ASP
185
B
ASP
185
20
1_555
C
GLN
187
B
GLN
187
20
1_555
C
VAL
188
B
VAL
188
20
1_555
C
VAL
189
B
VAL
189
20
1_555
D
02J
1
D
02J
1
20
2_656
A
MET
25
C
MET
25
14
1_555
A
HIS
41
C
HIS
41
14
1_555
A
PHE
138
C
PHE
138
14
1_555
A
GLY
141
C
GLY
141
14
1_555
A
CYS
143
C
CYS
143
14
1_555
A
HIS
161
C
HIS
161
14
1_555
A
GLN
162
C
GLN
162
14
1_555
A
LEU
163
C
LEU
163
14
1_555
A
GLU
164
C
GLU
164
14
1_555
A
HIS
170
C
HIS
170
14
1_555
A
GLN
187
C
GLN
187
14
1_555
A
VAL
188
C
VAL
188
14
1_555
A
VAL
189
C
VAL
189
14
1_555
B
LEU
244
A
LEU
244
14
2_555
5
C 1 2 1