0.011016
0.006360
0.000000
0.000000
0.012720
0.000000
0.000000
0.000000
0.021939
0.00000
0.00000
0.00000
0000-0001-9315-5332
Bacik, J.P.
0000-0001-7062-1644
Ando, N.
0000-0003-4636-9578
Fasan, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
90.780
90.780
45.580
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-fructofuranose
beta-D-fructose; D-fructose; fructose
D-saccharide, beta linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
R
C
N
76
S
C
N
77
S
C
N
78
R
C
N
79
N
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
S
C
N
99
R
C
N
100
S
C
N
101
S
C
N
102
R
C
N
103
N
C
N
104
N
O
N
105
N
O
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
N
N
123
S
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
N
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
S
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
N
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
C
Y
175
N
C
Y
176
N
C
Y
177
N
C
Y
178
N
C
N
179
N
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
O
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
Y
192
N
C
Y
193
N
C
Y
194
N
C
Y
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
O
N
208
N
O
Y
209
N
N
N
210
N
N
Y
211
N
N
N
212
N
N
N
213
N
FE
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
Y
251
N
C
Y
252
N
N
Y
253
N
C
Y
254
N
C
Y
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
S
C
N
275
N
C
N
276
N
C
N
277
N
C
N
278
N
O
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
N
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
C
N
345
N
S
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
N
404
N
O
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
S
N
414
N
O
N
415
N
O
N
416
N
O
N
417
N
O
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
R
C
N
423
N
O
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
N
N
436
S
C
N
437
N
C
N
438
N
O
N
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
N
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
N
N
463
S
C
N
464
N
C
N
465
N
O
N
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
C
N
473
N
O
N
474
N
O
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
N
N
487
S
C
N
488
N
C
N
489
N
O
N
490
N
C
N
491
N
C
N
492
N
C
N
493
N
O
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
Y
176
N
doub
Y
177
N
sing
Y
178
N
sing
N
179
N
sing
Y
180
N
doub
N
181
N
sing
Y
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
sing
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
sing
Y
258
N
doub
Y
259
N
doub
N
260
N
sing
Y
261
N
sing
N
262
N
sing
Y
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
doub
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
doub
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
doub
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
Y
438
N
doub
Y
439
N
sing
Y
440
N
sing
N
441
N
sing
Y
442
N
doub
Y
443
N
sing
Y
444
N
sing
N
445
N
sing
Y
446
N
sing
Y
447
N
doub
N
448
N
sing
Y
449
N
doub
N
450
N
sing
Y
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
doub
N
473
N
sing
Y
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
doub
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
US
Acs Catalysis
2155-5435
9
1514
1524
10.1021/acscatal.8b04073
31134138
Origin of high stereocontrol in olefin cyclopropanation catalyzed by an engineered carbene transferase.
2019
10.2210/pdb6m8f/pdb
pdb_00006m8f
100
1
PIXEL
2017-06-21
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.9768
1.0
F1
CHESS
0.9768
SYNCHROTRON
CHESS BEAMLINE F1
17298.094
Myoglobin
1
man
polymer
342.297
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
1
man
branched
96.063
SULFATE ION
3
syn
non-polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
18.015
water
224
nat
water
sucrose
no
no
MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKVGVTALTALGAILKKK
GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELGYQG
MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKVGVTALTALGAILKKK
GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELGYQG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Sperm whale
sample
1
154
MB
9755
Physeter catodon
562
Escherichia coli
Biological sequence
1
3.13
60.76
VAPOR DIFFUSION, HANGING DROP
A crystal was grown by mixing 1 ul of reservoir buffer (2 M ammonium sulfate, 0.2 M Tris pH 8.6) with 1 ul of protein in buffer (20 mM Tris pH 8.0, 1 mM EDTA). The crystal was cryoprotected by soaking it in a drop containing reservoir buffer supplemented with 25% sucrose for 5 minutes prior to being flash-cooled in liquid nitrogen
296
citation
atom_site
atom_site_anisotrop
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
pdbx_struct_conn_angle
struct_asym
struct_conn
struct_conn_type
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Data collection
Database references
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2019-01-23
1
1
2019-06-12
2
0
2020-07-29
2
1
2023-10-11
_citation.country
_citation.journal_abbrev
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_atom_site_anisotrop.id
_atom_site_anisotrop.pdbx_label_asym_id
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.src_method
_entity.type
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_struct_asym.entity_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
C
SUC
1
n
B
GLC
1
C
SUC
1
n
B
FRU
2
DFrufb
b-D-fructofuranose
b-D-Fruf
Fru
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
N
RCSB
Y
RCSB
2018-08-21
REL
REL
1
A
O
HOH
523
6.46
1
A
O
HOH
524
6.55
oligosaccharide
DFrufb2-1DGlcpa
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}
2
PDB-CARE
LINUCS
C1
O2
GLC
FRU
1
2
2
O1
HO2
sing
n
n
SO4
SULFATE ION
HEM
PROTOPORPHYRIN IX CONTAINING FE
HOH
water
1JW8
PDB
experimental model
Nutrient
oligosaccharide with reducing-end-to-reducing-end glycosidic bond
sucrose
Oligosaccharide
SO4
159
3
SO4
SO4
201
A
HEM
155
4
HEM
HEM
202
A
SO4
1
3
SO4
SO4
203
A
SO4
2
3
SO4
SO4
204
A
HOH
165
5
HOH
HOH
301
A
HOH
98
5
HOH
HOH
302
A
HOH
179
5
HOH
HOH
303
A
HOH
142
5
HOH
HOH
304
A
HOH
118
5
HOH
HOH
305
A
HOH
102
5
HOH
HOH
306
A
HOH
174
5
HOH
HOH
307
A
HOH
175
5
HOH
HOH
308
A
HOH
256
5
HOH
HOH
309
A
HOH
187
5
HOH
HOH
310
A
HOH
152
5
HOH
HOH
311
A
HOH
81
5
HOH
HOH
312
A
HOH
111
5
HOH
HOH
313
A
HOH
129
5
HOH
HOH
314
A
HOH
74
5
HOH
HOH
315
A
HOH
36
5
HOH
HOH
316
A
HOH
154
5
HOH
HOH
317
A
HOH
92
5
HOH
HOH
318
A
HOH
257
5
HOH
HOH
319
A
HOH
114
5
HOH
HOH
320
A
HOH
236
5
HOH
HOH
321
A
HOH
181
5
HOH
HOH
322
A
HOH
69
5
HOH
HOH
323
A
HOH
76
5
HOH
HOH
324
A
HOH
93
5
HOH
HOH
325
A
HOH
26
5
HOH
HOH
326
A
HOH
124
5
HOH
HOH
327
A
HOH
75
5
HOH
HOH
328
A
HOH
198
5
HOH
HOH
329
A
HOH
97
5
HOH
HOH
330
A
HOH
4
5
HOH
HOH
331
A
HOH
131
5
HOH
HOH
332
A
HOH
91
5
HOH
HOH
333
A
HOH
251
5
HOH
HOH
334
A
HOH
186
5
HOH
HOH
335
A
HOH
40
5
HOH
HOH
336
A
HOH
21
5
HOH
HOH
337
A
HOH
45
5
HOH
HOH
338
A
HOH
29
5
HOH
HOH
339
A
HOH
15
5
HOH
HOH
340
A
HOH
116
5
HOH
HOH
341
A
HOH
77
5
HOH
HOH
342
A
HOH
79
5
HOH
HOH
343
A
HOH
57
5
HOH
HOH
344
A
HOH
155
5
HOH
HOH
345
A
HOH
18
5
HOH
HOH
346
A
HOH
32
5
HOH
HOH
347
A
HOH
163
5
HOH
HOH
348
A
HOH
240
5
HOH
HOH
349
A
HOH
218
5
HOH
HOH
350
A
HOH
41
5
HOH
HOH
351
A
HOH
246
5
HOH
HOH
352
A
HOH
43
5
HOH
HOH
353
A
HOH
46
5
HOH
HOH
354
A
HOH
90
5
HOH
HOH
355
A
HOH
51
5
HOH
HOH
356
A
HOH
137
5
HOH
HOH
357
A
HOH
8
5
HOH
HOH
358
A
HOH
19
5
HOH
HOH
359
A
HOH
1
5
HOH
HOH
360
A
HOH
11
5
HOH
HOH
361
A
HOH
20
5
HOH
HOH
362
A
HOH
67
5
HOH
HOH
363
A
HOH
33
5
HOH
HOH
364
A
HOH
192
5
HOH
HOH
365
A
HOH
6
5
HOH
HOH
366
A
HOH
133
5
HOH
HOH
367
A
HOH
31
5
HOH
HOH
368
A
HOH
48
5
HOH
HOH
369
A
HOH
103
5
HOH
HOH
370
A
HOH
65
5
HOH
HOH
371
A
HOH
7
5
HOH
HOH
372
A
HOH
5
5
HOH
HOH
373
A
HOH
2
5
HOH
HOH
374
A
HOH
37
5
HOH
HOH
375
A
HOH
22
5
HOH
HOH
376
A
HOH
54
5
HOH
HOH
377
A
HOH
86
5
HOH
HOH
378
A
HOH
60
5
HOH
HOH
379
A
HOH
139
5
HOH
HOH
380
A
HOH
55
5
HOH
HOH
381
A
HOH
71
5
HOH
HOH
382
A
HOH
144
5
HOH
HOH
383
A
HOH
39
5
HOH
HOH
384
A
HOH
127
5
HOH
HOH
385
A
HOH
184
5
HOH
HOH
386
A
HOH
53
5
HOH
HOH
387
A
HOH
85
5
HOH
HOH
388
A
HOH
151
5
HOH
HOH
389
A
HOH
206
5
HOH
HOH
390
A
HOH
101
5
HOH
HOH
391
A
HOH
231
5
HOH
HOH
392
A
HOH
58
5
HOH
HOH
393
A
HOH
12
5
HOH
HOH
394
A
HOH
158
5
HOH
HOH
395
A
HOH
100
5
HOH
HOH
396
A
HOH
113
5
HOH
HOH
397
A
HOH
159
5
HOH
HOH
398
A
HOH
66
5
HOH
HOH
399
A
HOH
125
5
HOH
HOH
400
A
HOH
14
5
HOH
HOH
401
A
HOH
24
5
HOH
HOH
402
A
HOH
132
5
HOH
HOH
403
A
HOH
225
5
HOH
HOH
404
A
HOH
89
5
HOH
HOH
405
A
HOH
255
5
HOH
HOH
406
A
HOH
3
5
HOH
HOH
407
A
HOH
188
5
HOH
HOH
408
A
HOH
112
5
HOH
HOH
409
A
HOH
25
5
HOH
HOH
410
A
HOH
42
5
HOH
HOH
411
A
HOH
172
5
HOH
HOH
412
A
HOH
83
5
HOH
HOH
413
A
HOH
195
5
HOH
HOH
414
A
HOH
99
5
HOH
HOH
415
A
HOH
84
5
HOH
HOH
416
A
HOH
135
5
HOH
HOH
417
A
HOH
44
5
HOH
HOH
418
A
HOH
205
5
HOH
HOH
419
A
HOH
52
5
HOH
HOH
420
A
HOH
35
5
HOH
HOH
421
A
HOH
73
5
HOH
HOH
422
A
HOH
34
5
HOH
HOH
423
A
HOH
62
5
HOH
HOH
424
A
HOH
50
5
HOH
HOH
425
A
HOH
180
5
HOH
HOH
426
A
HOH
68
5
HOH
HOH
427
A
HOH
87
5
HOH
HOH
428
A
HOH
59
5
HOH
HOH
429
A
HOH
238
5
HOH
HOH
430
A
HOH
252
5
HOH
HOH
431
A
HOH
220
5
HOH
HOH
432
A
HOH
204
5
HOH
HOH
433
A
HOH
123
5
HOH
HOH
434
A
HOH
161
5
HOH
HOH
435
A
HOH
190
5
HOH
HOH
436
A
HOH
10
5
HOH
HOH
437
A
HOH
221
5
HOH
HOH
438
A
HOH
226
5
HOH
HOH
439
A
HOH
177
5
HOH
HOH
440
A
HOH
223
5
HOH
HOH
441
A
HOH
183
5
HOH
HOH
442
A
HOH
17
5
HOH
HOH
443
A
HOH
27
5
HOH
HOH
444
A
HOH
185
5
HOH
HOH
445
A
HOH
234
5
HOH
HOH
446
A
HOH
241
5
HOH
HOH
447
A
HOH
217
5
HOH
HOH
448
A
HOH
107
5
HOH
HOH
449
A
HOH
104
5
HOH
HOH
450
A
HOH
134
5
HOH
HOH
451
A
HOH
13
5
HOH
HOH
452
A
HOH
143
5
HOH
HOH
453
A
HOH
227
5
HOH
HOH
454
A
HOH
250
5
HOH
HOH
455
A
HOH
122
5
HOH
HOH
456
A
HOH
64
5
HOH
HOH
457
A
HOH
237
5
HOH
HOH
458
A
HOH
56
5
HOH
HOH
459
A
HOH
167
5
HOH
HOH
460
A
HOH
168
5
HOH
HOH
461
A
HOH
202
5
HOH
HOH
462
A
HOH
191
5
HOH
HOH
463
A
HOH
9
5
HOH
HOH
464
A
HOH
16
5
HOH
HOH
465
A
HOH
30
5
HOH
HOH
466
A
HOH
88
5
HOH
HOH
467
A
HOH
128
5
HOH
HOH
468
A
HOH
208
5
HOH
HOH
469
A
HOH
119
5
HOH
HOH
470
A
HOH
229
5
HOH
HOH
471
A
HOH
150
5
HOH
HOH
472
A
HOH
193
5
HOH
HOH
473
A
HOH
244
5
HOH
HOH
474
A
HOH
61
5
HOH
HOH
475
A
HOH
157
5
HOH
HOH
476
A
HOH
115
5
HOH
HOH
477
A
HOH
199
5
HOH
HOH
478
A
HOH
47
5
HOH
HOH
479
A
HOH
160
5
HOH
HOH
480
A
HOH
72
5
HOH
HOH
481
A
HOH
23
5
HOH
HOH
482
A
HOH
149
5
HOH
HOH
483
A
HOH
239
5
HOH
HOH
484
A
HOH
121
5
HOH
HOH
485
A
HOH
216
5
HOH
HOH
486
A
HOH
153
5
HOH
HOH
487
A
HOH
106
5
HOH
HOH
488
A
HOH
138
5
HOH
HOH
489
A
HOH
228
5
HOH
HOH
490
A
HOH
207
5
HOH
HOH
491
A
HOH
254
5
HOH
HOH
492
A
HOH
70
5
HOH
HOH
493
A
HOH
164
5
HOH
HOH
494
A
HOH
110
5
HOH
HOH
495
A
HOH
200
5
HOH
HOH
496
A
HOH
49
5
HOH
HOH
497
A
HOH
80
5
HOH
HOH
498
A
HOH
210
5
HOH
HOH
499
A
HOH
156
5
HOH
HOH
500
A
HOH
245
5
HOH
HOH
501
A
HOH
197
5
HOH
HOH
502
A
HOH
130
5
HOH
HOH
503
A
HOH
222
5
HOH
HOH
504
A
HOH
194
5
HOH
HOH
505
A
HOH
147
5
HOH
HOH
506
A
HOH
219
5
HOH
HOH
507
A
HOH
201
5
HOH
HOH
508
A
HOH
242
5
HOH
HOH
509
A
HOH
253
5
HOH
HOH
510
A
HOH
209
5
HOH
HOH
511
A
HOH
109
5
HOH
HOH
512
A
HOH
105
5
HOH
HOH
513
A
HOH
196
5
HOH
HOH
514
A
HOH
95
5
HOH
HOH
515
A
HOH
182
5
HOH
HOH
516
A
HOH
141
5
HOH
HOH
517
A
HOH
78
5
HOH
HOH
518
A
HOH
117
5
HOH
HOH
519
A
HOH
38
5
HOH
HOH
520
A
HOH
214
5
HOH
HOH
521
A
HOH
213
5
HOH
HOH
522
A
HOH
96
5
HOH
HOH
523
A
HOH
146
5
HOH
HOH
524
A
MET
0
n
1
MET
0
A
VAL
1
n
2
VAL
1
A
LEU
2
n
3
LEU
2
A
SER
3
n
4
SER
3
A
GLU
4
n
5
GLU
4
A
GLY
5
n
6
GLY
5
A
GLU
6
n
7
GLU
6
A
TRP
7
n
8
TRP
7
A
GLN
8
n
9
GLN
8
A
LEU
9
n
10
LEU
9
A
VAL
10
n
11
VAL
10
A
LEU
11
n
12
LEU
11
A
HIS
12
n
13
HIS
12
A
VAL
13
n
14
VAL
13
A
TRP
14
n
15
TRP
14
A
ALA
15
n
16
ALA
15
A
LYS
16
n
17
LYS
16
A
VAL
17
n
18
VAL
17
A
GLU
18
n
19
GLU
18
A
ALA
19
n
20
ALA
19
A
ASP
20
n
21
ASP
20
A
VAL
21
n
22
VAL
21
A
ALA
22
n
23
ALA
22
A
GLY
23
n
24
GLY
23
A
HIS
24
n
25
HIS
24
A
GLY
25
n
26
GLY
25
A
GLN
26
n
27
GLN
26
A
ASP
27
n
28
ASP
27
A
ILE
28
n
29
ILE
28
A
LEU
29
n
30
LEU
29
A
ILE
30
n
31
ILE
30
A
ARG
31
n
32
ARG
31
A
LEU
32
n
33
LEU
32
A
PHE
33
n
34
PHE
33
A
LYS
34
n
35
LYS
34
A
SER
35
n
36
SER
35
A
HIS
36
n
37
HIS
36
A
PRO
37
n
38
PRO
37
A
GLU
38
n
39
GLU
38
A
THR
39
n
40
THR
39
A
LEU
40
n
41
LEU
40
A
GLU
41
n
42
GLU
41
A
LYS
42
n
43
LYS
42
A
PHE
43
n
44
PHE
43
A
ASP
44
n
45
ASP
44
A
ARG
45
n
46
ARG
45
A
PHE
46
n
47
PHE
46
A
LYS
47
n
48
LYS
47
A
HIS
48
n
49
HIS
48
A
LEU
49
n
50
LEU
49
A
LYS
50
n
51
LYS
50
A
THR
51
n
52
THR
51
A
GLU
52
n
53
GLU
52
A
ALA
53
n
54
ALA
53
A
GLU
54
n
55
GLU
54
A
MET
55
n
56
MET
55
A
LYS
56
n
57
LYS
56
A
ALA
57
n
58
ALA
57
A
SER
58
n
59
SER
58
A
GLU
59
n
60
GLU
59
A
ASP
60
n
61
ASP
60
A
LEU
61
n
62
LEU
61
A
LYS
62
n
63
LYS
62
A
LYS
63
n
64
LYS
63
A
VAL
64
n
65
VAL
64
A
GLY
65
n
66
GLY
65
A
VAL
66
n
67
VAL
66
A
THR
67
n
68
THR
67
A
ALA
68
n
69
ALA
68
A
LEU
69
n
70
LEU
69
A
THR
70
n
71
THR
70
A
ALA
71
n
72
ALA
71
A
LEU
72
n
73
LEU
72
A
GLY
73
n
74
GLY
73
A
ALA
74
n
75
ALA
74
A
ILE
75
n
76
ILE
75
A
LEU
76
n
77
LEU
76
A
LYS
77
n
78
LYS
77
A
LYS
78
n
79
LYS
78
A
LYS
79
n
80
LYS
79
A
GLY
80
n
81
GLY
80
A
HIS
81
n
82
HIS
81
A
HIS
82
n
83
HIS
82
A
GLU
83
n
84
GLU
83
A
ALA
84
n
85
ALA
84
A
GLU
85
n
86
GLU
85
A
LEU
86
n
87
LEU
86
A
LYS
87
n
88
LYS
87
A
PRO
88
n
89
PRO
88
A
LEU
89
n
90
LEU
89
A
ALA
90
n
91
ALA
90
A
GLN
91
n
92
GLN
91
A
SER
92
n
93
SER
92
A
HIS
93
n
94
HIS
93
A
ALA
94
n
95
ALA
94
A
THR
95
n
96
THR
95
A
LYS
96
n
97
LYS
96
A
HIS
97
n
98
HIS
97
A
LYS
98
n
99
LYS
98
A
ILE
99
n
100
ILE
99
A
PRO
100
n
101
PRO
100
A
ILE
101
n
102
ILE
101
A
LYS
102
n
103
LYS
102
A
TYR
103
n
104
TYR
103
A
LEU
104
n
105
LEU
104
A
GLU
105
n
106
GLU
105
A
PHE
106
n
107
PHE
106
A
ILE
107
n
108
ILE
107
A
SER
108
n
109
SER
108
A
GLU
109
n
110
GLU
109
A
ALA
110
n
111
ALA
110
A
ILE
111
n
112
ILE
111
A
ILE
112
n
113
ILE
112
A
HIS
113
n
114
HIS
113
A
VAL
114
n
115
VAL
114
A
LEU
115
n
116
LEU
115
A
HIS
116
n
117
HIS
116
A
SER
117
n
118
SER
117
A
ARG
118
n
119
ARG
118
A
HIS
119
n
120
HIS
119
A
PRO
120
n
121
PRO
120
A
GLY
121
n
122
GLY
121
A
ASN
122
n
123
ASN
122
A
PHE
123
n
124
PHE
123
A
GLY
124
n
125
GLY
124
A
ALA
125
n
126
ALA
125
A
ASP
126
n
127
ASP
126
A
ALA
127
n
128
ALA
127
A
GLN
128
n
129
GLN
128
A
GLY
129
n
130
GLY
129
A
ALA
130
n
131
ALA
130
A
MET
131
n
132
MET
131
A
ASN
132
n
133
ASN
132
A
LYS
133
n
134
LYS
133
A
ALA
134
n
135
ALA
134
A
LEU
135
n
136
LEU
135
A
GLU
136
n
137
GLU
136
A
LEU
137
n
138
LEU
137
A
PHE
138
n
139
PHE
138
A
ARG
139
n
140
ARG
139
A
LYS
140
n
141
LYS
140
A
ASP
141
n
142
ASP
141
A
ILE
142
n
143
ILE
142
A
ALA
143
n
144
ALA
143
A
ALA
144
n
145
ALA
144
A
LYS
145
n
146
LYS
145
A
TYR
146
n
147
TYR
146
A
LYS
147
n
148
LYS
147
A
GLU
148
n
149
GLU
148
A
LEU
149
n
150
LEU
149
A
GLY
150
n
151
GLY
150
A
TYR
151
n
152
TYR
151
A
GLN
152
n
153
GLN
152
A
GLY
153
n
154
GLY
153
A
author_and_software_defined_assembly
PISA
1
monomeric
none
A
HIS
93
A
NE2
HIS
94
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
NA
HEM
1_555
90.3
A
HIS
93
A
NE2
HIS
94
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
NB
HEM
1_555
91.2
A
HEM
202
D
NA
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
NB
HEM
1_555
89.5
A
HIS
93
A
NE2
HIS
94
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
NC
HEM
1_555
94.3
A
HEM
202
D
NA
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
NC
HEM
1_555
175.4
A
HEM
202
D
NB
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
NC
HEM
1_555
89.9
A
HIS
93
A
NE2
HIS
94
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
ND
HEM
1_555
93.6
A
HEM
202
D
NA
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
ND
HEM
1_555
90.4
A
HEM
202
D
NB
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
ND
HEM
1_555
175.1
A
HEM
202
D
NC
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HEM
202
D
ND
HEM
1_555
89.8
A
HIS
93
A
NE2
HIS
94
1_555
A
HEM
202
D
FE
HEM
1_555
A
HOH
395
G
O
HOH
1_555
176.8
A
HEM
202
D
NA
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HOH
395
G
O
HOH
1_555
86.5
A
HEM
202
D
NB
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HOH
395
G
O
HOH
1_555
89.4
A
HEM
202
D
NC
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HOH
395
G
O
HOH
1_555
88.9
A
HEM
202
D
ND
HEM
1_555
A
HEM
202
D
FE
HEM
1_555
A
HOH
395
G
O
HOH
1_555
85.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HOH
492
G
HOH
1
A
CG
LYS
102
A
CG
LYS
103
1
Y
1
A
CD
LYS
102
A
CD
LYS
103
1
Y
1
A
CE
LYS
102
A
CE
LYS
103
1
Y
1
A
NZ
LYS
102
A
NZ
LYS
103
1
Y
1
A
ASP
20
-157.08
73.81
1
A
PHE
46
-144.59
26.83
1
A
LYS
98
61.94
61.85
1
A
PHE
123
-141.46
49.78
0.1458
0.1263
0.1273
1.100
32.163
3765
76038
4.95
87.53
0.07
1
FREE R-VALUE
1.34
MOLECULAR REPLACEMENT
14.27
0.90
1.11
1JW8
ML
FLAT BULK SOLVENT MODEL
1.100
32.163
224
1521
81
0
1216
0.008
1408
1.134
1919
29.707
524
0.076
203
0.006
230
0.3356
0.3220
1.1139
35
595
20.00
0.3029
0.2753
1.1286
48
1107
36.00
0.2604
0.2685
1.1441
67
1433
47.00
0.2407
0.2331
1.1604
97
1735
58.00
0.2374
0.2130
1.1777
125
2072
68.00
0.2226
0.1954
1.1961
115
2286
75.00
0.2123
0.1877
1.2157
111
2479
82.00
0.2217
0.1717
1.2367
145
2667
87.00
0.2009
0.1569
1.2592
171
2840
94.00
0.1482
0.1352
1.2834
159
2978
98.00
0.1589
0.1275
1.3096
134
2989
98.00
0.1485
0.1179
1.3381
165
3059
100.00
0.1224
0.1107
1.3692
156
3040
100.00
0.1375
0.1112
1.4035
127
3069
100.00
0.1181
0.1128
1.4414
141
3072
100.00
0.1132
0.1066
1.4838
149
3047
100.00
0.1426
0.0990
1.5317
161
3072
100.00
0.1158
0.1006
1.5865
139
3082
100.00
0.1169
0.1084
1.6500
190
3012
100.00
0.1381
0.1068
1.7251
148
3065
100.00
0.1461
0.1104
1.8160
150
3098
100.00
0.1221
0.1105
1.9298
159
3042
100.00
0.1207
0.1149
2.0788
172
3063
100.00
0.1247
0.1059
2.2879
151
3077
100.00
0.1311
0.1131
2.6188
183
3056
100.00
0.1513
0.1291
3.2989
209
3063
100.00
0.1612
0.1434
32.1765
158
3175
100.00
1.10
39.43
6M8F
76057
0.999
0.051
0.025
1
13.5
4.3
87.7
0.448
1.10
1.16
5028
0.617
0.407
1
1.4
40.4
refinement
PHENIX
(1.10_2155: ???)
data reduction
MOSFLM
data scaling
SCALA
phasing
PHENIX
N
Engineered sperm whale myoglobin-based carbene transferase
1
N
N
2
N
N
3
N
N
4
N
N
3
N
N
3
N
N
5
N
N
A
SER
3
A
SER
4
HELX_P
A
GLU
18
A
GLU
19
1
AA1
16
A
ASP
20
A
ASP
21
HELX_P
A
HIS
36
A
HIS
37
1
AA2
17
A
PRO
37
A
PRO
38
HELX_P
A
PHE
43
A
PHE
44
5
AA3
7
A
THR
51
A
THR
52
HELX_P
A
SER
58
A
SER
59
1
AA4
8
A
SER
58
A
SER
59
HELX_P
A
LYS
78
A
LYS
79
1
AA5
21
A
HIS
82
A
HIS
83
HELX_P
A
LYS
96
A
LYS
97
1
AA6
15
A
PRO
100
A
PRO
101
HELX_P
A
HIS
119
A
HIS
120
1
AA7
20
A
PRO
120
A
PRO
121
HELX_P
A
PHE
123
A
PHE
124
5
AA8
4
A
GLY
124
A
GLY
125
HELX_P
A
LEU
149
A
LEU
150
1
AA9
26
covale
1.422
both
sing
B
GLC
1
B
C1
GLC
1_555
B
FRU
2
B
O2
FRU
1_555
metalc
2.112
A
HIS
93
A
NE2
HIS
94
1_555
A
HEM
202
D
FE
HEM
1_555
metalc
2.164
A
HEM
202
D
FE
HEM
1_555
A
HOH
395
G
O
HOH
1_555
TRANSFERASE
Metalloprotein, myoglobin, carbene transferase, cyclopropanation, heme, TRANSFERASE
MYG_PHYCD
UNP
1
1
P02185
MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKK
GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG
1
154
6M8F
0
153
P02185
A
1
1
154
1
HIS
conflict
VAL
64
6M8F
A
P02185
UNP
65
65
1
VAL
conflict
ALA
68
6M8F
A
P02185
UNP
69
69
1
ASP
conflict
ASN
122
6M8F
A
P02185
UNP
123
123
168
P 6