0.012246
0.000000
0.001792
-0.000000
0.014180
0.000000
0.000000
-0.000000
0.011988
0.00000
0.00000
0.00000
Young, B.
Tolbert, W.D.
Pazgier, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
98.33
90.00
81.658
70.520
84.305
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
R
C
N
251
R
C
N
252
R
C
N
253
S
C
N
254
R
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
N
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
O
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
R
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
N
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
N
407
N
C
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
Y
347
N
doub
Y
348
N
sing
Y
349
N
sing
N
350
N
sing
Y
351
N
doub
Y
352
N
sing
Y
353
N
sing
N
354
N
sing
Y
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
doub
N
382
N
sing
Y
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
US
J.Virol.
JOVIAM
0825
1098-5514
94
10.1128/JVI.01120-19
31776278
Boosting with AIDSVAX B/E Enhances Env Constant Region 1 and 2 Antibody-Dependent Cellular Cytotoxicity Breadth and Potency.
2020
0000-0002-6378-6288
10.2210/pdb6mfj/pdb
pdb_00006mfj
100
1
PIXEL
2018-01-18
DECTRIS PILATUS 6M
Si (111)
SINGLE WAVELENGTH
M
x-ray
1
0.97946
1.0
BL12-2
SSRL
0.97946
SYNCHROTRON
SSRL BEAMLINE BL12-2
24504.537
DH677.3 Fab heavy chain
2
man
polymer
23265.709
DH677.3 Fab light chain
2
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
2
syn
non-polymer
18.015
water
140
nat
water
no
no
QVQLVQSGAEVQKPGASVKVSCKASGYTFASYDINWVRQATGQGLEWMGWMNPKTGNTGYAQKFQGRVTLTRNTSISTAY
MELTSLRSEDTAVYYCATYRIIAAVGYRYFQYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV
TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QVQLVQSGAEVQKPGASVKVSCKASGYTFASYDINWVRQATGQGLEWMGWMNPKTGNTGYAQKFQGRVTLTRNTSISTAY
MELTSLRSEDTAVYYCATYRIIAAVGYRYFQYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV
TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
H,A
polypeptide(L)
no
no
DIQLTQSPSSLSASVGDSVTITCRASQGFGNYLAWYQQRPGKVPEVLIYAATTLQSGVPSRFSGSGSGTDFTLTISSLQP
EDVATYYCQKYNSAPFTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ
ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DIQLTQSPSSLSASVGDSVTITCRASQGFGNYLAWYQQRPGKVPEVLIYAATTLQSGVPSRFSGSGSGTDFTLTISSLQP
EDVATYYCQKYNSAPFTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ
ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
L,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
Human
sample
1
228
9606
Homo sapiens
HEK 293
9606
Homo sapiens
plasmid
Biological sequence
Human
Human
sample
1
214
9606
Homo sapiens
HEK 293
9606
Homo sapiens
plasmid
Biological sequence
1
2.51
51.07
VAPOR DIFFUSION, HANGING DROP
7.5
20% PEG 3000
100 mM HEPES pH 7.5
200 mM sodium chloride
294
pdbx_audit_support
chem_comp
citation
citation_author
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Author supporting evidence
Data collection
Database references
Data collection
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2019-09-25
1
1
2019-12-18
1
2
2020-04-01
1
3
2020-07-29
1
4
2023-10-11
_pdbx_audit_support.funding_organization
_chem_comp.type
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_chem_comp.name
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_role
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
R01AI116274
United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
P01AI120756
United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
R01AI129769
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
N
RCSB
Y
RCSB
2018-09-11
REL
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
3QEG
PDB
experimental model
NAG
500
3
NAG
NAG
500
H
NAG
500
3
NAG
NAG
500
A
HOH
26
4
HOH
HOH
601
H
HOH
108
4
HOH
HOH
602
H
HOH
25
4
HOH
HOH
603
H
HOH
101
4
HOH
HOH
604
H
HOH
129
4
HOH
HOH
605
H
HOH
42
4
HOH
HOH
606
H
HOH
50
4
HOH
HOH
607
H
HOH
110
4
HOH
HOH
608
H
HOH
97
4
HOH
HOH
609
H
HOH
12
4
HOH
HOH
610
H
HOH
73
4
HOH
HOH
611
H
HOH
65
4
HOH
HOH
612
H
HOH
115
4
HOH
HOH
613
H
HOH
90
4
HOH
HOH
614
H
HOH
140
4
HOH
HOH
615
H
HOH
8
4
HOH
HOH
616
H
HOH
120
4
HOH
HOH
617
H
HOH
36
4
HOH
HOH
618
H
HOH
139
4
HOH
HOH
619
H
HOH
27
4
HOH
HOH
620
H
HOH
77
4
HOH
HOH
621
H
HOH
71
4
HOH
HOH
622
H
HOH
86
4
HOH
HOH
623
H
HOH
49
4
HOH
HOH
624
H
HOH
46
4
HOH
HOH
625
H
HOH
3
4
HOH
HOH
626
H
HOH
135
4
HOH
HOH
627
H
HOH
72
4
HOH
HOH
301
L
HOH
18
4
HOH
HOH
302
L
HOH
22
4
HOH
HOH
303
L
HOH
40
4
HOH
HOH
304
L
HOH
4
4
HOH
HOH
305
L
HOH
20
4
HOH
HOH
306
L
HOH
24
4
HOH
HOH
307
L
HOH
104
4
HOH
HOH
308
L
HOH
51
4
HOH
HOH
309
L
HOH
132
4
HOH
HOH
310
L
HOH
16
4
HOH
HOH
311
L
HOH
57
4
HOH
HOH
312
L
HOH
75
4
HOH
HOH
313
L
HOH
114
4
HOH
HOH
314
L
HOH
48
4
HOH
HOH
315
L
HOH
56
4
HOH
HOH
316
L
HOH
74
4
HOH
HOH
317
L
HOH
39
4
HOH
HOH
318
L
HOH
54
4
HOH
HOH
319
L
HOH
53
4
HOH
HOH
320
L
HOH
52
4
HOH
HOH
321
L
HOH
94
4
HOH
HOH
322
L
HOH
17
4
HOH
HOH
323
L
HOH
79
4
HOH
HOH
324
L
HOH
69
4
HOH
HOH
325
L
HOH
21
4
HOH
HOH
326
L
HOH
1
4
HOH
HOH
327
L
HOH
62
4
HOH
HOH
328
L
HOH
81
4
HOH
HOH
329
L
HOH
2
4
HOH
HOH
330
L
HOH
64
4
HOH
HOH
331
L
HOH
106
4
HOH
HOH
332
L
HOH
38
4
HOH
HOH
333
L
HOH
109
4
HOH
HOH
334
L
HOH
113
4
HOH
HOH
335
L
HOH
127
4
HOH
HOH
336
L
HOH
126
4
HOH
HOH
337
L
HOH
134
4
HOH
HOH
338
L
HOH
103
4
HOH
HOH
601
A
HOH
35
4
HOH
HOH
602
A
HOH
78
4
HOH
HOH
603
A
HOH
96
4
HOH
HOH
604
A
HOH
41
4
HOH
HOH
605
A
HOH
47
4
HOH
HOH
606
A
HOH
44
4
HOH
HOH
607
A
HOH
29
4
HOH
HOH
608
A
HOH
105
4
HOH
HOH
609
A
HOH
121
4
HOH
HOH
610
A
HOH
58
4
HOH
HOH
611
A
HOH
32
4
HOH
HOH
612
A
HOH
99
4
HOH
HOH
613
A
HOH
119
4
HOH
HOH
614
A
HOH
88
4
HOH
HOH
615
A
HOH
66
4
HOH
HOH
616
A
HOH
122
4
HOH
HOH
617
A
HOH
10
4
HOH
HOH
618
A
HOH
11
4
HOH
HOH
619
A
HOH
95
4
HOH
HOH
620
A
HOH
92
4
HOH
HOH
621
A
HOH
87
4
HOH
HOH
622
A
HOH
28
4
HOH
HOH
623
A
HOH
30
4
HOH
HOH
624
A
HOH
63
4
HOH
HOH
625
A
HOH
85
4
HOH
HOH
626
A
HOH
93
4
HOH
HOH
627
A
HOH
124
4
HOH
HOH
628
A
HOH
136
4
HOH
HOH
629
A
HOH
5
4
HOH
HOH
301
B
HOH
55
4
HOH
HOH
302
B
HOH
67
4
HOH
HOH
303
B
HOH
9
4
HOH
HOH
304
B
HOH
61
4
HOH
HOH
305
B
HOH
98
4
HOH
HOH
306
B
HOH
107
4
HOH
HOH
307
B
HOH
33
4
HOH
HOH
308
B
HOH
128
4
HOH
HOH
309
B
HOH
59
4
HOH
HOH
310
B
HOH
80
4
HOH
HOH
311
B
HOH
19
4
HOH
HOH
312
B
HOH
45
4
HOH
HOH
313
B
HOH
14
4
HOH
HOH
314
B
HOH
112
4
HOH
HOH
315
B
HOH
31
4
HOH
HOH
316
B
HOH
13
4
HOH
HOH
317
B
HOH
89
4
HOH
HOH
318
B
HOH
76
4
HOH
HOH
319
B
HOH
34
4
HOH
HOH
320
B
HOH
91
4
HOH
HOH
321
B
HOH
15
4
HOH
HOH
322
B
HOH
123
4
HOH
HOH
323
B
HOH
133
4
HOH
HOH
324
B
HOH
130
4
HOH
HOH
325
B
HOH
82
4
HOH
HOH
326
B
HOH
37
4
HOH
HOH
327
B
HOH
7
4
HOH
HOH
328
B
HOH
102
4
HOH
HOH
329
B
HOH
137
4
HOH
HOH
330
B
HOH
111
4
HOH
HOH
331
B
HOH
138
4
HOH
HOH
332
B
HOH
100
4
HOH
HOH
333
B
HOH
23
4
HOH
HOH
334
B
HOH
60
4
HOH
HOH
335
B
HOH
70
4
HOH
HOH
336
B
HOH
43
4
HOH
HOH
337
B
HOH
118
4
HOH
HOH
338
B
HOH
6
4
HOH
HOH
339
B
HOH
117
4
HOH
HOH
340
B
HOH
125
4
HOH
HOH
341
B
HOH
68
4
HOH
HOH
342
B
HOH
116
4
HOH
HOH
343
B
HOH
84
4
HOH
HOH
344
B
HOH
83
4
HOH
HOH
345
B
HOH
131
4
HOH
HOH
346
B
GLN
1
n
1
GLN
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLN
6
n
6
GLN
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
ALA
9
n
9
ALA
9
H
GLU
10
n
10
GLU
10
H
VAL
11
n
11
VAL
11
H
GLN
12
n
12
GLN
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
ALA
16
n
16
ALA
16
H
SER
17
n
17
SER
17
H
VAL
18
n
18
VAL
18
H
LYS
19
n
19
LYS
19
H
VAL
20
n
20
VAL
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
LYS
23
n
23
LYS
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
THR
28
n
28
THR
28
H
PHE
29
n
29
PHE
29
H
ALA
30
n
30
ALA
30
H
SER
31
n
31
SER
31
H
TYR
32
n
32
TYR
32
H
ASP
33
n
33
ASP
33
H
ILE
34
n
34
ILE
34
H
ASN
35
n
35
ASN
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
ARG
38
n
38
ARG
38
H
GLN
39
n
39
GLN
39
H
ALA
40
n
40
ALA
40
H
THR
41
n
41
THR
41
H
GLY
42
n
42
GLY
42
H
GLN
43
n
43
GLN
43
H
GLY
44
n
44
GLY
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
MET
48
n
48
MET
48
H
GLY
49
n
49
GLY
49
H
TRP
50
n
50
TRP
50
H
MET
51
n
51
MET
51
H
ASN
52
n
52
ASN
52
H
PRO
52
n
53
A
PRO
52
H
LYS
53
n
54
LYS
53
H
THR
54
n
55
THR
54
H
GLY
55
n
56
GLY
55
H
ASN
56
n
57
ASN
56
H
THR
57
n
58
THR
57
H
GLY
58
n
59
GLY
58
H
TYR
59
n
60
TYR
59
H
ALA
60
n
61
ALA
60
H
GLN
61
n
62
GLN
61
H
LYS
62
n
63
LYS
62
H
PHE
63
n
64
PHE
63
H
GLN
64
n
65
GLN
64
H
GLY
65
n
66
GLY
65
H
ARG
66
n
67
ARG
66
H
VAL
67
n
68
VAL
67
H
THR
68
n
69
THR
68
H
LEU
69
n
70
LEU
69
H
THR
70
n
71
THR
70
H
ARG
71
n
72
ARG
71
H
ASN
72
n
73
ASN
72
H
THR
73
n
74
THR
73
H
SER
74
n
75
SER
74
H
ILE
75
n
76
ILE
75
H
SER
76
n
77
SER
76
H
THR
77
n
78
THR
77
H
ALA
78
n
79
ALA
78
H
TYR
79
n
80
TYR
79
H
MET
80
n
81
MET
80
H
GLU
81
n
82
GLU
81
H
LEU
82
n
83
LEU
82
H
THR
82
n
84
A
THR
82
H
SER
82
n
85
B
SER
82
H
LEU
82
n
86
C
LEU
82
H
ARG
83
n
87
ARG
83
H
SER
84
n
88
SER
84
H
GLU
85
n
89
GLU
85
H
ASP
86
n
90
ASP
86
H
THR
87
n
91
THR
87
H
ALA
88
n
92
ALA
88
H
VAL
89
n
93
VAL
89
H
TYR
90
n
94
TYR
90
H
TYR
91
n
95
TYR
91
H
CYS
92
n
96
CYS
92
H
ALA
93
n
97
ALA
93
H
THR
94
n
98
THR
94
H
TYR
95
n
99
TYR
95
H
ARG
96
n
100
ARG
96
H
ILE
97
n
101
ILE
97
H
ILE
98
n
102
ILE
98
H
ALA
99
n
103
ALA
99
H
ALA
100
n
104
ALA
100
H
VAL
100
n
105
A
VAL
100
H
GLY
100
n
106
B
GLY
100
H
TYR
100
n
107
C
TYR
100
H
ARG
100
n
108
D
ARG
100
H
TYR
100
n
109
E
TYR
100
H
PHE
100
n
110
F
PHE
100
H
GLN
101
n
111
GLN
101
H
TYR
102
n
112
TYR
102
H
TRP
103
n
113
TRP
103
H
GLY
104
n
114
GLY
104
H
GLN
105
n
115
GLN
105
H
GLY
106
n
116
GLY
106
H
THR
107
n
117
THR
107
H
LEU
108
n
118
LEU
108
H
VAL
109
n
119
VAL
109
H
THR
110
n
120
THR
110
H
VAL
111
n
121
VAL
111
H
SER
112
n
122
SER
112
H
SER
113
n
123
SER
113
H
ALA
114
n
124
ALA
114
H
SER
115
n
125
SER
115
H
THR
116
n
126
THR
116
H
LYS
117
n
127
LYS
117
H
GLY
118
n
128
GLY
118
H
PRO
119
n
129
PRO
119
H
SER
120
n
130
SER
120
H
VAL
121
n
131
VAL
121
H
PHE
122
n
132
PHE
122
H
PRO
123
n
133
PRO
123
H
LEU
124
n
134
LEU
124
H
ALA
125
n
135
ALA
125
H
PRO
126
n
136
PRO
126
H
SER
127
n
137
SER
127
H
SER
128
n
138
SER
128
H
n
139
129
H
n
140
130
H
n
141
131
H
n
142
132
H
n
143
133
H
GLY
134
n
144
GLY
134
H
THR
135
n
145
THR
135
H
ALA
136
n
146
ALA
136
H
ALA
137
n
147
ALA
137
H
LEU
138
n
148
LEU
138
H
GLY
139
n
149
GLY
139
H
CYS
140
n
150
CYS
140
H
LEU
141
n
151
LEU
141
H
VAL
142
n
152
VAL
142
H
LYS
143
n
153
LYS
143
H
ASP
144
n
154
ASP
144
H
TYR
145
n
155
TYR
145
H
PHE
146
n
156
PHE
146
H
PRO
147
n
157
PRO
147
H
GLU
148
n
158
GLU
148
H
PRO
149
n
159
PRO
149
H
VAL
150
n
160
VAL
150
H
THR
151
n
161
THR
151
H
VAL
152
n
162
VAL
152
H
SER
153
n
163
SER
153
H
TRP
154
n
164
TRP
154
H
ASN
155
n
165
ASN
155
H
SER
156
n
166
SER
156
H
GLY
157
n
167
GLY
157
H
ALA
158
n
168
ALA
158
H
LEU
159
n
169
LEU
159
H
THR
160
n
170
THR
160
H
SER
161
n
171
SER
161
H
GLY
162
n
172
GLY
162
H
VAL
163
n
173
VAL
163
H
HIS
164
n
174
HIS
164
H
THR
165
n
175
THR
165
H
PHE
166
n
176
PHE
166
H
PRO
167
n
177
PRO
167
H
ALA
168
n
178
ALA
168
H
VAL
169
n
179
VAL
169
H
LEU
170
n
180
LEU
170
H
GLN
171
n
181
GLN
171
H
SER
172
n
182
SER
172
H
SER
173
n
183
SER
173
H
GLY
174
n
184
GLY
174
H
LEU
175
n
185
LEU
175
H
TYR
176
n
186
TYR
176
H
SER
177
n
187
SER
177
H
LEU
178
n
188
LEU
178
H
SER
179
n
189
SER
179
H
SER
180
n
190
SER
180
H
VAL
181
n
191
VAL
181
H
VAL
182
n
192
VAL
182
H
THR
183
n
193
THR
183
H
VAL
184
n
194
VAL
184
H
PRO
185
n
195
PRO
185
H
SER
186
n
196
SER
186
H
SER
187
n
197
SER
187
H
SER
188
n
198
SER
188
H
LEU
189
n
199
LEU
189
H
GLY
190
n
200
GLY
190
H
THR
191
n
201
THR
191
H
GLN
192
n
202
GLN
192
H
THR
193
n
203
THR
193
H
TYR
194
n
204
TYR
194
H
ILE
195
n
205
ILE
195
H
CYS
196
n
206
CYS
196
H
ASN
197
n
207
ASN
197
H
VAL
198
n
208
VAL
198
H
ASN
199
n
209
ASN
199
H
HIS
200
n
210
HIS
200
H
LYS
201
n
211
LYS
201
H
PRO
202
n
212
PRO
202
H
SER
203
n
213
SER
203
H
ASN
204
n
214
ASN
204
H
THR
205
n
215
THR
205
H
LYS
206
n
216
LYS
206
H
VAL
207
n
217
VAL
207
H
ASP
208
n
218
ASP
208
H
LYS
209
n
219
LYS
209
H
ARG
210
n
220
ARG
210
H
VAL
211
n
221
VAL
211
H
GLU
212
n
222
GLU
212
H
PRO
213
n
223
PRO
213
H
LYS
214
n
224
LYS
214
H
n
225
215
H
n
226
216
H
n
227
217
H
n
228
218
H
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
GLN
3
n
3
GLN
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
SER
9
n
9
SER
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
SER
12
n
12
SER
12
L
ALA
13
n
13
ALA
13
L
SER
14
n
14
SER
14
L
VAL
15
n
15
VAL
15
L
GLY
16
n
16
GLY
16
L
ASP
17
n
17
ASP
17
L
SER
18
n
18
SER
18
L
VAL
19
n
19
VAL
19
L
THR
20
n
20
THR
20
L
ILE
21
n
21
ILE
21
L
THR
22
n
22
THR
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
ALA
25
n
25
ALA
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
GLY
28
n
28
GLY
28
L
PHE
29
n
29
PHE
29
L
GLY
30
n
30
GLY
30
L
ASN
31
n
31
ASN
31
L
TYR
32
n
32
TYR
32
L
LEU
33
n
33
LEU
33
L
ALA
34
n
34
ALA
34
L
TRP
35
n
35
TRP
35
L
TYR
36
n
36
TYR
36
L
GLN
37
n
37
GLN
37
L
GLN
38
n
38
GLN
38
L
ARG
39
n
39
ARG
39
L
PRO
40
n
40
PRO
40
L
GLY
41
n
41
GLY
41
L
LYS
42
n
42
LYS
42
L
VAL
43
n
43
VAL
43
L
PRO
44
n
44
PRO
44
L
GLU
45
n
45
GLU
45
L
VAL
46
n
46
VAL
46
L
LEU
47
n
47
LEU
47
L
ILE
48
n
48
ILE
48
L
TYR
49
n
49
TYR
49
L
ALA
50
n
50
ALA
50
L
ALA
51
n
51
ALA
51
L
THR
52
n
52
THR
52
L
THR
53
n
53
THR
53
L
LEU
54
n
54
LEU
54
L
GLN
55
n
55
GLN
55
L
SER
56
n
56
SER
56
L
GLY
57
n
57
GLY
57
L
VAL
58
n
58
VAL
58
L
PRO
59
n
59
PRO
59
L
SER
60
n
60
SER
60
L
ARG
61
n
61
ARG
61
L
PHE
62
n
62
PHE
62
L
SER
63
n
63
SER
63
L
GLY
64
n
64
GLY
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
GLY
68
n
68
GLY
68
L
THR
69
n
69
THR
69
L
ASP
70
n
70
ASP
70
L
PHE
71
n
71
PHE
71
L
THR
72
n
72
THR
72
L
LEU
73
n
73
LEU
73
L
THR
74
n
74
THR
74
L
ILE
75
n
75
ILE
75
L
SER
76
n
76
SER
76
L
SER
77
n
77
SER
77
L
LEU
78
n
78
LEU
78
L
GLN
79
n
79
GLN
79
L
PRO
80
n
80
PRO
80
L
GLU
81
n
81
GLU
81
L
ASP
82
n
82
ASP
82
L
VAL
83
n
83
VAL
83
L
ALA
84
n
84
ALA
84
L
THR
85
n
85
THR
85
L
TYR
86
n
86
TYR
86
L
TYR
87
n
87
TYR
87
L
CYS
88
n
88
CYS
88
L
GLN
89
n
89
GLN
89
L
LYS
90
n
90
LYS
90
L
TYR
91
n
91
TYR
91
L
ASN
92
n
92
ASN
92
L
SER
93
n
93
SER
93
L
ALA
94
n
94
ALA
94
L
PRO
95
n
95
PRO
95
L
PHE
96
n
96
PHE
96
L
THR
97
n
97
THR
97
L
PHE
98
n
98
PHE
98
L
GLY
99
n
99
GLY
99
L
GLN
100
n
100
GLN
100
L
GLY
101
n
101
GLY
101
L
THR
102
n
102
THR
102
L
ARG
103
n
103
ARG
103
L
LEU
104
n
104
LEU
104
L
GLU
105
n
105
GLU
105
L
ILE
106
n
106
ILE
106
L
LYS
107
n
107
LYS
107
L
ARG
108
n
108
ARG
108
L
THR
109
n
109
THR
109
L
VAL
110
n
110
VAL
110
L
ALA
111
n
111
ALA
111
L
ALA
112
n
112
ALA
112
L
PRO
113
n
113
PRO
113
L
SER
114
n
114
SER
114
L
VAL
115
n
115
VAL
115
L
PHE
116
n
116
PHE
116
L
ILE
117
n
117
ILE
117
L
PHE
118
n
118
PHE
118
L
PRO
119
n
119
PRO
119
L
PRO
120
n
120
PRO
120
L
SER
121
n
121
SER
121
L
ASP
122
n
122
ASP
122
L
GLU
123
n
123
GLU
123
L
GLN
124
n
124
GLN
124
L
LEU
125
n
125
LEU
125
L
LYS
126
n
126
LYS
126
L
SER
127
n
127
SER
127
L
GLY
128
n
128
GLY
128
L
THR
129
n
129
THR
129
L
ALA
130
n
130
ALA
130
L
SER
131
n
131
SER
131
L
VAL
132
n
132
VAL
132
L
VAL
133
n
133
VAL
133
L
CYS
134
n
134
CYS
134
L
LEU
135
n
135
LEU
135
L
LEU
136
n
136
LEU
136
L
ASN
137
n
137
ASN
137
L
ASN
138
n
138
ASN
138
L
PHE
139
n
139
PHE
139
L
TYR
140
n
140
TYR
140
L
PRO
141
n
141
PRO
141
L
ARG
142
n
142
ARG
142
L
GLU
143
n
143
GLU
143
L
ALA
144
n
144
ALA
144
L
LYS
145
n
145
LYS
145
L
VAL
146
n
146
VAL
146
L
GLN
147
n
147
GLN
147
L
TRP
148
n
148
TRP
148
L
LYS
149
n
149
LYS
149
L
VAL
150
n
150
VAL
150
L
ASP
151
n
151
ASP
151
L
ASN
152
n
152
ASN
152
L
ALA
153
n
153
ALA
153
L
LEU
154
n
154
LEU
154
L
GLN
155
n
155
GLN
155
L
SER
156
n
156
SER
156
L
GLY
157
n
157
GLY
157
L
ASN
158
n
158
ASN
158
L
SER
159
n
159
SER
159
L
GLN
160
n
160
GLN
160
L
GLU
161
n
161
GLU
161
L
SER
162
n
162
SER
162
L
VAL
163
n
163
VAL
163
L
THR
164
n
164
THR
164
L
GLU
165
n
165
GLU
165
L
GLN
166
n
166
GLN
166
L
ASP
167
n
167
ASP
167
L
SER
168
n
168
SER
168
L
LYS
169
n
169
LYS
169
L
ASP
170
n
170
ASP
170
L
SER
171
n
171
SER
171
L
THR
172
n
172
THR
172
L
TYR
173
n
173
TYR
173
L
SER
174
n
174
SER
174
L
LEU
175
n
175
LEU
175
L
SER
176
n
176
SER
176
L
SER
177
n
177
SER
177
L
THR
178
n
178
THR
178
L
LEU
179
n
179
LEU
179
L
THR
180
n
180
THR
180
L
LEU
181
n
181
LEU
181
L
SER
182
n
182
SER
182
L
LYS
183
n
183
LYS
183
L
ALA
184
n
184
ALA
184
L
ASP
185
n
185
ASP
185
L
TYR
186
n
186
TYR
186
L
GLU
187
n
187
GLU
187
L
LYS
188
n
188
LYS
188
L
HIS
189
n
189
HIS
189
L
LYS
190
n
190
LYS
190
L
VAL
191
n
191
VAL
191
L
TYR
192
n
192
TYR
192
L
ALA
193
n
193
ALA
193
L
CYS
194
n
194
CYS
194
L
GLU
195
n
195
GLU
195
L
VAL
196
n
196
VAL
196
L
THR
197
n
197
THR
197
L
HIS
198
n
198
HIS
198
L
GLN
199
n
199
GLN
199
L
GLY
200
n
200
GLY
200
L
LEU
201
n
201
LEU
201
L
SER
202
n
202
SER
202
L
SER
203
n
203
SER
203
L
PRO
204
n
204
PRO
204
L
VAL
205
n
205
VAL
205
L
THR
206
n
206
THR
206
L
LYS
207
n
207
LYS
207
L
SER
208
n
208
SER
208
L
PHE
209
n
209
PHE
209
L
ASN
210
n
210
ASN
210
L
ARG
211
n
211
ARG
211
L
GLY
212
n
212
GLY
212
L
GLU
213
n
213
GLU
213
L
n
214
214
L
GLN
1
n
1
GLN
1
A
VAL
2
n
2
VAL
2
A
GLN
3
n
3
GLN
3
A
LEU
4
n
4
LEU
4
A
VAL
5
n
5
VAL
5
A
GLN
6
n
6
GLN
6
A
SER
7
n
7
SER
7
A
GLY
8
n
8
GLY
8
A
ALA
9
n
9
ALA
9
A
GLU
10
n
10
GLU
10
A
VAL
11
n
11
VAL
11
A
GLN
12
n
12
GLN
12
A
LYS
13
n
13
LYS
13
A
PRO
14
n
14
PRO
14
A
GLY
15
n
15
GLY
15
A
ALA
16
n
16
ALA
16
A
SER
17
n
17
SER
17
A
VAL
18
n
18
VAL
18
A
LYS
19
n
19
LYS
19
A
VAL
20
n
20
VAL
20
A
SER
21
n
21
SER
21
A
CYS
22
n
22
CYS
22
A
LYS
23
n
23
LYS
23
A
ALA
24
n
24
ALA
24
A
SER
25
n
25
SER
25
A
GLY
26
n
26
GLY
26
A
TYR
27
n
27
TYR
27
A
THR
28
n
28
THR
28
A
PHE
29
n
29
PHE
29
A
ALA
30
n
30
ALA
30
A
SER
31
n
31
SER
31
A
TYR
32
n
32
TYR
32
A
ASP
33
n
33
ASP
33
A
ILE
34
n
34
ILE
34
A
ASN
35
n
35
ASN
35
A
TRP
36
n
36
TRP
36
A
VAL
37
n
37
VAL
37
A
ARG
38
n
38
ARG
38
A
GLN
39
n
39
GLN
39
A
ALA
40
n
40
ALA
40
A
THR
41
n
41
THR
41
A
GLY
42
n
42
GLY
42
A
GLN
43
n
43
GLN
43
A
GLY
44
n
44
GLY
44
A
LEU
45
n
45
LEU
45
A
GLU
46
n
46
GLU
46
A
TRP
47
n
47
TRP
47
A
MET
48
n
48
MET
48
A
GLY
49
n
49
GLY
49
A
TRP
50
n
50
TRP
50
A
MET
51
n
51
MET
51
A
ASN
52
n
52
ASN
52
A
PRO
52
n
53
A
PRO
52
A
LYS
53
n
54
LYS
53
A
THR
54
n
55
THR
54
A
GLY
55
n
56
GLY
55
A
ASN
56
n
57
ASN
56
A
THR
57
n
58
THR
57
A
GLY
58
n
59
GLY
58
A
TYR
59
n
60
TYR
59
A
ALA
60
n
61
ALA
60
A
GLN
61
n
62
GLN
61
A
LYS
62
n
63
LYS
62
A
PHE
63
n
64
PHE
63
A
GLN
64
n
65
GLN
64
A
GLY
65
n
66
GLY
65
A
ARG
66
n
67
ARG
66
A
VAL
67
n
68
VAL
67
A
THR
68
n
69
THR
68
A
LEU
69
n
70
LEU
69
A
THR
70
n
71
THR
70
A
ARG
71
n
72
ARG
71
A
ASN
72
n
73
ASN
72
A
THR
73
n
74
THR
73
A
SER
74
n
75
SER
74
A
ILE
75
n
76
ILE
75
A
SER
76
n
77
SER
76
A
THR
77
n
78
THR
77
A
ALA
78
n
79
ALA
78
A
TYR
79
n
80
TYR
79
A
MET
80
n
81
MET
80
A
GLU
81
n
82
GLU
81
A
LEU
82
n
83
LEU
82
A
THR
82
n
84
A
THR
82
A
SER
82
n
85
B
SER
82
A
LEU
82
n
86
C
LEU
82
A
ARG
83
n
87
ARG
83
A
SER
84
n
88
SER
84
A
GLU
85
n
89
GLU
85
A
ASP
86
n
90
ASP
86
A
THR
87
n
91
THR
87
A
ALA
88
n
92
ALA
88
A
VAL
89
n
93
VAL
89
A
TYR
90
n
94
TYR
90
A
TYR
91
n
95
TYR
91
A
CYS
92
n
96
CYS
92
A
ALA
93
n
97
ALA
93
A
THR
94
n
98
THR
94
A
TYR
95
n
99
TYR
95
A
ARG
96
n
100
ARG
96
A
ILE
97
n
101
ILE
97
A
ILE
98
n
102
ILE
98
A
ALA
99
n
103
ALA
99
A
ALA
100
n
104
ALA
100
A
VAL
100
n
105
A
VAL
100
A
GLY
100
n
106
B
GLY
100
A
TYR
100
n
107
C
TYR
100
A
ARG
100
n
108
D
ARG
100
A
TYR
100
n
109
E
TYR
100
A
PHE
100
n
110
F
PHE
100
A
GLN
101
n
111
GLN
101
A
TYR
102
n
112
TYR
102
A
TRP
103
n
113
TRP
103
A
GLY
104
n
114
GLY
104
A
GLN
105
n
115
GLN
105
A
GLY
106
n
116
GLY
106
A
THR
107
n
117
THR
107
A
LEU
108
n
118
LEU
108
A
VAL
109
n
119
VAL
109
A
THR
110
n
120
THR
110
A
VAL
111
n
121
VAL
111
A
SER
112
n
122
SER
112
A
SER
113
n
123
SER
113
A
ALA
114
n
124
ALA
114
A
SER
115
n
125
SER
115
A
THR
116
n
126
THR
116
A
LYS
117
n
127
LYS
117
A
GLY
118
n
128
GLY
118
A
PRO
119
n
129
PRO
119
A
SER
120
n
130
SER
120
A
VAL
121
n
131
VAL
121
A
PHE
122
n
132
PHE
122
A
PRO
123
n
133
PRO
123
A
LEU
124
n
134
LEU
124
A
ALA
125
n
135
ALA
125
A
PRO
126
n
136
PRO
126
A
SER
127
n
137
SER
127
A
n
138
128
A
n
139
129
A
n
140
130
A
n
141
131
A
n
142
132
A
n
143
133
A
n
144
134
A
THR
135
n
145
THR
135
A
ALA
136
n
146
ALA
136
A
ALA
137
n
147
ALA
137
A
LEU
138
n
148
LEU
138
A
GLY
139
n
149
GLY
139
A
CYS
140
n
150
CYS
140
A
LEU
141
n
151
LEU
141
A
VAL
142
n
152
VAL
142
A
LYS
143
n
153
LYS
143
A
ASP
144
n
154
ASP
144
A
TYR
145
n
155
TYR
145
A
PHE
146
n
156
PHE
146
A
PRO
147
n
157
PRO
147
A
GLU
148
n
158
GLU
148
A
PRO
149
n
159
PRO
149
A
VAL
150
n
160
VAL
150
A
THR
151
n
161
THR
151
A
VAL
152
n
162
VAL
152
A
SER
153
n
163
SER
153
A
TRP
154
n
164
TRP
154
A
ASN
155
n
165
ASN
155
A
SER
156
n
166
SER
156
A
GLY
157
n
167
GLY
157
A
ALA
158
n
168
ALA
158
A
LEU
159
n
169
LEU
159
A
THR
160
n
170
THR
160
A
SER
161
n
171
SER
161
A
GLY
162
n
172
GLY
162
A
VAL
163
n
173
VAL
163
A
HIS
164
n
174
HIS
164
A
THR
165
n
175
THR
165
A
PHE
166
n
176
PHE
166
A
PRO
167
n
177
PRO
167
A
ALA
168
n
178
ALA
168
A
VAL
169
n
179
VAL
169
A
LEU
170
n
180
LEU
170
A
GLN
171
n
181
GLN
171
A
SER
172
n
182
SER
172
A
SER
173
n
183
SER
173
A
GLY
174
n
184
GLY
174
A
LEU
175
n
185
LEU
175
A
TYR
176
n
186
TYR
176
A
SER
177
n
187
SER
177
A
LEU
178
n
188
LEU
178
A
SER
179
n
189
SER
179
A
SER
180
n
190
SER
180
A
VAL
181
n
191
VAL
181
A
VAL
182
n
192
VAL
182
A
THR
183
n
193
THR
183
A
VAL
184
n
194
VAL
184
A
PRO
185
n
195
PRO
185
A
SER
186
n
196
SER
186
A
SER
187
n
197
SER
187
A
SER
188
n
198
SER
188
A
LEU
189
n
199
LEU
189
A
GLY
190
n
200
GLY
190
A
THR
191
n
201
THR
191
A
GLN
192
n
202
GLN
192
A
THR
193
n
203
THR
193
A
TYR
194
n
204
TYR
194
A
ILE
195
n
205
ILE
195
A
CYS
196
n
206
CYS
196
A
ASN
197
n
207
ASN
197
A
VAL
198
n
208
VAL
198
A
ASN
199
n
209
ASN
199
A
HIS
200
n
210
HIS
200
A
LYS
201
n
211
LYS
201
A
PRO
202
n
212
PRO
202
A
SER
203
n
213
SER
203
A
ASN
204
n
214
ASN
204
A
THR
205
n
215
THR
205
A
LYS
206
n
216
LYS
206
A
VAL
207
n
217
VAL
207
A
ASP
208
n
218
ASP
208
A
LYS
209
n
219
LYS
209
A
ARG
210
n
220
ARG
210
A
VAL
211
n
221
VAL
211
A
GLU
212
n
222
GLU
212
A
PRO
213
n
223
PRO
213
A
LYS
214
n
224
LYS
214
A
n
225
215
A
n
226
216
A
n
227
217
A
n
228
218
A
ASP
1
n
1
ASP
1
B
ILE
2
n
2
ILE
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
THR
5
n
5
THR
5
B
GLN
6
n
6
GLN
6
B
SER
7
n
7
SER
7
B
PRO
8
n
8
PRO
8
B
SER
9
n
9
SER
9
B
SER
10
n
10
SER
10
B
LEU
11
n
11
LEU
11
B
SER
12
n
12
SER
12
B
ALA
13
n
13
ALA
13
B
SER
14
n
14
SER
14
B
VAL
15
n
15
VAL
15
B
GLY
16
n
16
GLY
16
B
ASP
17
n
17
ASP
17
B
SER
18
n
18
SER
18
B
VAL
19
n
19
VAL
19
B
THR
20
n
20
THR
20
B
ILE
21
n
21
ILE
21
B
THR
22
n
22
THR
22
B
CYS
23
n
23
CYS
23
B
ARG
24
n
24
ARG
24
B
ALA
25
n
25
ALA
25
B
SER
26
n
26
SER
26
B
GLN
27
n
27
GLN
27
B
GLY
28
n
28
GLY
28
B
PHE
29
n
29
PHE
29
B
GLY
30
n
30
GLY
30
B
ASN
31
n
31
ASN
31
B
TYR
32
n
32
TYR
32
B
LEU
33
n
33
LEU
33
B
ALA
34
n
34
ALA
34
B
TRP
35
n
35
TRP
35
B
TYR
36
n
36
TYR
36
B
GLN
37
n
37
GLN
37
B
GLN
38
n
38
GLN
38
B
ARG
39
n
39
ARG
39
B
PRO
40
n
40
PRO
40
B
GLY
41
n
41
GLY
41
B
LYS
42
n
42
LYS
42
B
VAL
43
n
43
VAL
43
B
PRO
44
n
44
PRO
44
B
GLU
45
n
45
GLU
45
B
VAL
46
n
46
VAL
46
B
LEU
47
n
47
LEU
47
B
ILE
48
n
48
ILE
48
B
TYR
49
n
49
TYR
49
B
ALA
50
n
50
ALA
50
B
ALA
51
n
51
ALA
51
B
THR
52
n
52
THR
52
B
THR
53
n
53
THR
53
B
LEU
54
n
54
LEU
54
B
GLN
55
n
55
GLN
55
B
SER
56
n
56
SER
56
B
GLY
57
n
57
GLY
57
B
VAL
58
n
58
VAL
58
B
PRO
59
n
59
PRO
59
B
SER
60
n
60
SER
60
B
ARG
61
n
61
ARG
61
B
PHE
62
n
62
PHE
62
B
SER
63
n
63
SER
63
B
GLY
64
n
64
GLY
64
B
SER
65
n
65
SER
65
B
GLY
66
n
66
GLY
66
B
SER
67
n
67
SER
67
B
GLY
68
n
68
GLY
68
B
THR
69
n
69
THR
69
B
ASP
70
n
70
ASP
70
B
PHE
71
n
71
PHE
71
B
THR
72
n
72
THR
72
B
LEU
73
n
73
LEU
73
B
THR
74
n
74
THR
74
B
ILE
75
n
75
ILE
75
B
SER
76
n
76
SER
76
B
SER
77
n
77
SER
77
B
LEU
78
n
78
LEU
78
B
GLN
79
n
79
GLN
79
B
PRO
80
n
80
PRO
80
B
GLU
81
n
81
GLU
81
B
ASP
82
n
82
ASP
82
B
VAL
83
n
83
VAL
83
B
ALA
84
n
84
ALA
84
B
THR
85
n
85
THR
85
B
TYR
86
n
86
TYR
86
B
TYR
87
n
87
TYR
87
B
CYS
88
n
88
CYS
88
B
GLN
89
n
89
GLN
89
B
LYS
90
n
90
LYS
90
B
TYR
91
n
91
TYR
91
B
ASN
92
n
92
ASN
92
B
SER
93
n
93
SER
93
B
ALA
94
n
94
ALA
94
B
PRO
95
n
95
PRO
95
B
PHE
96
n
96
PHE
96
B
THR
97
n
97
THR
97
B
PHE
98
n
98
PHE
98
B
GLY
99
n
99
GLY
99
B
GLN
100
n
100
GLN
100
B
GLY
101
n
101
GLY
101
B
THR
102
n
102
THR
102
B
ARG
103
n
103
ARG
103
B
LEU
104
n
104
LEU
104
B
GLU
105
n
105
GLU
105
B
ILE
106
n
106
ILE
106
B
LYS
107
n
107
LYS
107
B
ARG
108
n
108
ARG
108
B
THR
109
n
109
THR
109
B
VAL
110
n
110
VAL
110
B
ALA
111
n
111
ALA
111
B
ALA
112
n
112
ALA
112
B
PRO
113
n
113
PRO
113
B
SER
114
n
114
SER
114
B
VAL
115
n
115
VAL
115
B
PHE
116
n
116
PHE
116
B
ILE
117
n
117
ILE
117
B
PHE
118
n
118
PHE
118
B
PRO
119
n
119
PRO
119
B
PRO
120
n
120
PRO
120
B
SER
121
n
121
SER
121
B
ASP
122
n
122
ASP
122
B
GLU
123
n
123
GLU
123
B
GLN
124
n
124
GLN
124
B
LEU
125
n
125
LEU
125
B
LYS
126
n
126
LYS
126
B
SER
127
n
127
SER
127
B
GLY
128
n
128
GLY
128
B
THR
129
n
129
THR
129
B
ALA
130
n
130
ALA
130
B
SER
131
n
131
SER
131
B
VAL
132
n
132
VAL
132
B
VAL
133
n
133
VAL
133
B
CYS
134
n
134
CYS
134
B
LEU
135
n
135
LEU
135
B
LEU
136
n
136
LEU
136
B
ASN
137
n
137
ASN
137
B
ASN
138
n
138
ASN
138
B
PHE
139
n
139
PHE
139
B
TYR
140
n
140
TYR
140
B
PRO
141
n
141
PRO
141
B
ARG
142
n
142
ARG
142
B
GLU
143
n
143
GLU
143
B
ALA
144
n
144
ALA
144
B
LYS
145
n
145
LYS
145
B
VAL
146
n
146
VAL
146
B
GLN
147
n
147
GLN
147
B
TRP
148
n
148
TRP
148
B
LYS
149
n
149
LYS
149
B
VAL
150
n
150
VAL
150
B
ASP
151
n
151
ASP
151
B
ASN
152
n
152
ASN
152
B
ALA
153
n
153
ALA
153
B
LEU
154
n
154
LEU
154
B
GLN
155
n
155
GLN
155
B
SER
156
n
156
SER
156
B
GLY
157
n
157
GLY
157
B
ASN
158
n
158
ASN
158
B
SER
159
n
159
SER
159
B
GLN
160
n
160
GLN
160
B
GLU
161
n
161
GLU
161
B
SER
162
n
162
SER
162
B
VAL
163
n
163
VAL
163
B
THR
164
n
164
THR
164
B
GLU
165
n
165
GLU
165
B
GLN
166
n
166
GLN
166
B
ASP
167
n
167
ASP
167
B
SER
168
n
168
SER
168
B
LYS
169
n
169
LYS
169
B
ASP
170
n
170
ASP
170
B
SER
171
n
171
SER
171
B
THR
172
n
172
THR
172
B
TYR
173
n
173
TYR
173
B
SER
174
n
174
SER
174
B
LEU
175
n
175
LEU
175
B
SER
176
n
176
SER
176
B
SER
177
n
177
SER
177
B
THR
178
n
178
THR
178
B
LEU
179
n
179
LEU
179
B
THR
180
n
180
THR
180
B
LEU
181
n
181
LEU
181
B
SER
182
n
182
SER
182
B
LYS
183
n
183
LYS
183
B
ALA
184
n
184
ALA
184
B
ASP
185
n
185
ASP
185
B
TYR
186
n
186
TYR
186
B
GLU
187
n
187
GLU
187
B
LYS
188
n
188
LYS
188
B
HIS
189
n
189
HIS
189
B
LYS
190
n
190
LYS
190
B
VAL
191
n
191
VAL
191
B
TYR
192
n
192
TYR
192
B
ALA
193
n
193
ALA
193
B
CYS
194
n
194
CYS
194
B
GLU
195
n
195
GLU
195
B
VAL
196
n
196
VAL
196
B
THR
197
n
197
THR
197
B
HIS
198
n
198
HIS
198
B
GLN
199
n
199
GLN
199
B
GLY
200
n
200
GLY
200
B
LEU
201
n
201
LEU
201
B
SER
202
n
202
SER
202
B
SER
203
n
203
SER
203
B
PRO
204
n
204
PRO
204
B
VAL
205
n
205
VAL
205
B
THR
206
n
206
THR
206
B
LYS
207
n
207
LYS
207
B
SER
208
n
208
SER
208
B
PHE
209
n
209
PHE
209
B
ASN
210
n
210
ASN
210
B
ARG
211
n
211
ARG
211
B
GLY
212
n
212
GLY
212
B
n
213
213
B
n
214
214
B
3.5236
-1.2477
-0.1410
1.6694
0.2307
0.9583
0.2211
0.2416
-0.1278
-0.2694
-0.1360
-0.0064
-0.0380
-0.0157
-0.0851
0.1490
-0.0175
-0.0229
0.1490
-0.0222
0.0243
refined
-39.5187
18.3297
-30.9323
X-RAY DIFFRACTION
2.9595
-0.4901
-0.8493
0.5624
0.2104
1.0299
0.0411
0.0443
0.0502
-0.0160
-0.0401
-0.0983
-0.0527
0.0766
-0.0010
0.0203
-0.0092
-0.0065
0.0321
0.0140
0.0220
refined
-29.9011
16.7474
-15.3084
X-RAY DIFFRACTION
1.9186
-0.7989
-1.8055
2.0298
1.7305
3.0750
0.0196
0.2443
0.0154
-0.0976
-0.0931
0.2176
-0.0909
-0.3079
0.0736
0.0399
0.0142
-0.0349
0.1747
0.0367
0.0590
refined
-66.3435
-6.3632
-18.4037
X-RAY DIFFRACTION
3.0729
-0.4271
-1.2627
0.6336
0.2580
1.1887
-0.0251
-0.1814
-0.0773
0.0480
0.0260
0.0903
0.0603
0.0448
-0.0008
0.0202
-0.0074
-0.0084
0.0604
0.0134
0.0269
refined
-59.8457
-6.0274
-0.9117
X-RAY DIFFRACTION
H
1
H
214
X-RAY DIFFRACTION
1
L
1
L
213
X-RAY DIFFRACTION
2
A
1
A
214
X-RAY DIFFRACTION
3
B
1
B
212
X-RAY DIFFRACTION
4
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
gel filtration
3520
-20
19670
3540
-19
19370
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
H
N
VAL
5
A
N
VAL
5
H
O
LYS
23
A
O
LYS
23
H
N
VAL
20
A
N
VAL
20
H
O
MET
80
A
O
MET
81
H
O
TYR
79
A
O
TYR
80
H
N
THR
70
A
N
THR
71
H
N
GLU
10
A
N
GLU
10
H
O
THR
110
A
O
THR
120
H
O
VAL
109
A
O
VAL
119
H
N
ALA
88
A
N
ALA
92
H
O
TYR
91
A
O
TYR
95
H
N
VAL
37
A
N
VAL
37
H
N
TRP
36
A
N
TRP
36
H
O
MET
48
A
O
MET
48
H
N
TRP
50
A
N
TRP
50
H
O
GLY
58
A
O
GLY
59
H
N
GLU
10
A
N
GLU
10
H
O
THR
110
A
O
THR
120
H
O
VAL
109
A
O
VAL
119
H
N
ALA
88
A
N
ALA
92
H
N
THR
94
A
N
THR
98
H
O
TYR
102
A
O
TYR
112
H
N
LEU
124
A
N
LEU
134
H
O
GLY
139
A
O
GLY
149
H
N
ALA
136
A
N
ALA
146
H
O
VAL
184
A
O
VAL
194
H
O
VAL
181
A
O
VAL
191
H
N
HIS
164
A
N
HIS
174
H
N
LEU
124
A
N
LEU
134
H
O
GLY
139
A
O
GLY
149
H
N
ALA
136
A
N
ALA
146
H
O
VAL
184
A
O
VAL
194
H
O
SER
177
A
O
SER
187
H
N
VAL
169
A
N
VAL
179
H
N
SER
153
A
N
SER
163
H
O
ASN
197
A
O
ASN
207
H
N
VAL
198
A
N
VAL
208
H
O
VAL
207
A
O
VAL
217
L
N
SER
7
B
N
SER
7
L
O
THR
22
B
O
THR
22
L
N
ILE
21
B
N
ILE
21
L
O
LEU
73
B
O
LEU
73
L
O
THR
74
B
O
THR
74
L
N
SER
63
B
N
SER
63
L
N
ALA
13
B
N
ALA
13
L
O
GLU
105
B
O
GLU
105
L
O
THR
102
B
O
THR
102
L
N
TYR
86
B
N
TYR
86
L
O
TYR
87
B
O
TYR
87
L
N
TYR
36
B
N
TYR
36
L
N
TRP
35
B
N
TRP
35
L
O
LEU
47
B
O
LEU
47
L
N
TYR
49
B
N
TYR
49
L
O
THR
53
B
O
THR
53
L
N
SER
114
B
N
SER
114
L
O
ASN
137
B
O
ASN
137
L
N
PHE
139
B
N
PHE
139
L
O
TYR
173
B
O
TYR
173
L
O
THR
178
B
O
THR
178
L
N
GLN
160
B
N
GLN
160
L
O
ALA
153
B
O
ALA
153
L
N
VAL
150
B
N
VAL
150
L
N
LYS
149
B
N
LYS
149
L
O
ALA
193
B
O
ALA
193
L
N
VAL
196
B
N
VAL
196
L
O
VAL
205
B
O
VAL
205
A
N
VAL
5
C
N
VAL
5
A
O
LYS
23
C
O
LYS
23
A
N
VAL
18
C
N
VAL
18
A
O
LEU
82
C
O
LEU
83
A
O
GLU
81
C
O
GLU
82
A
N
THR
68
C
N
THR
69
A
N
GLU
10
C
N
GLU
10
A
O
THR
110
C
O
THR
120
A
O
VAL
109
C
O
VAL
119
A
N
ALA
88
C
N
ALA
92
A
O
TYR
91
C
O
TYR
95
A
N
VAL
37
C
N
VAL
37
A
N
TRP
36
C
N
TRP
36
A
O
MET
48
C
O
MET
48
A
N
TRP
50
C
N
TRP
50
A
O
GLY
58
C
O
GLY
59
A
N
GLU
10
C
N
GLU
10
A
O
THR
110
C
O
THR
120
A
O
VAL
109
C
O
VAL
119
A
N
ALA
88
C
N
ALA
92
A
N
THR
94
C
N
THR
98
A
O
TYR
102
C
O
TYR
112
A
N
SER
120
C
N
SER
130
A
O
LYS
143
C
O
LYS
153
A
N
TYR
145
C
N
TYR
155
A
O
TYR
176
C
O
TYR
186
A
O
VAL
181
C
O
VAL
191
A
N
HIS
164
C
N
HIS
174
A
N
SER
120
C
N
SER
130
A
O
LYS
143
C
O
LYS
153
A
N
TYR
145
C
N
TYR
155
A
O
TYR
176
C
O
TYR
186
A
O
SER
177
C
O
SER
187
A
N
VAL
169
C
N
VAL
179
A
N
SER
153
C
N
SER
163
A
O
ASN
197
C
O
ASN
207
A
N
VAL
198
C
N
VAL
208
A
O
VAL
207
C
O
VAL
217
B
N
SER
7
D
N
SER
7
B
O
THR
22
D
O
THR
22
B
N
CYS
23
D
N
CYS
23
B
O
PHE
71
D
O
PHE
71
B
O
THR
74
D
O
THR
74
B
N
SER
63
D
N
SER
63
B
N
LEU
11
D
N
LEU
11
B
O
GLU
105
D
O
GLU
105
B
O
THR
102
D
O
THR
102
B
N
TYR
86
D
N
TYR
86
B
O
GLN
89
D
O
GLN
89
B
N
ALA
34
D
N
ALA
34
B
N
TRP
35
D
N
TRP
35
B
O
LEU
47
D
O
LEU
47
B
N
TYR
49
D
N
TYR
49
B
O
THR
53
D
O
THR
53
B
N
PHE
118
D
N
PHE
118
B
O
VAL
133
D
O
VAL
133
B
N
LEU
136
D
N
LEU
136
B
O
LEU
175
D
O
LEU
175
B
O
SER
176
D
O
SER
176
B
N
SER
162
D
N
SER
162
B
O
ALA
153
D
O
ALA
153
B
N
VAL
150
D
N
VAL
150
B
N
GLN
147
D
N
GLN
147
B
O
GLU
195
D
O
GLU
195
B
N
VAL
196
D
N
VAL
196
B
O
VAL
205
D
O
VAL
205
1
H
LYS
129
A
LYS
139
1
Y
1
H
SER
130
A
SER
140
1
Y
1
H
THR
131
A
THR
141
1
Y
1
H
SER
132
A
SER
142
1
Y
1
H
GLY
133
A
GLY
143
1
Y
1
H
SER
215
A
SER
225
1
Y
1
H
CYS
216
A
CYS
226
1
Y
1
H
ASP
217
A
ASP
227
1
Y
1
H
LYS
218
A
LYS
228
1
Y
1
L
CYS
214
B
CYS
214
1
Y
1
A
SER
128
C
SER
138
1
Y
1
A
LYS
129
C
LYS
139
1
Y
1
A
SER
130
C
SER
140
1
Y
1
A
THR
131
C
THR
141
1
Y
1
A
SER
132
C
SER
142
1
Y
1
A
GLY
133
C
GLY
143
1
Y
1
A
GLY
134
C
GLY
144
1
Y
1
A
SER
215
C
SER
225
1
Y
1
A
CYS
216
C
CYS
226
1
Y
1
A
ASP
217
C
ASP
227
1
Y
1
A
LYS
218
C
LYS
228
1
Y
1
B
GLU
213
D
GLU
213
1
Y
1
B
CYS
214
D
CYS
214
1
Y
1
A
A
CG2
O6
ILE
NAG
75
500
2.09
1
A
A
ND2
O5
ASN
NAG
72
500
2.15
1
B
B
O
OG
GLN
SER
124
127
2.18
1
H
SER
17
71.94
147.83
1
H
THR
160
-135.83
-44.23
1
H
SER
187
-63.40
2.14
1
L
ILE
2
55.85
101.57
1
L
PHE
29
-144.44
33.45
1
L
ALA
51
67.94
-40.07
1
L
SER
77
-159.99
73.07
1
L
ASN
152
76.27
-16.78
1
L
LYS
169
-136.10
-41.60
C
1
A
TYR
100
-108.83
56.44
1
A
ASP
144
65.40
60.03
1
B
PHE
29
-149.79
27.75
1
B
ALA
51
74.04
-49.36
1
B
ARG
211
-46.99
100.42
37.691
-0.71
0.00
-2.07
1.89
-0.00
-0.55
0.937
0.879
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.26134
0.19859
0.20152
2.62
43.03
1308
26929
4.6
97.85
29.576
0.295
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.350
0.80
0.80
1.20
3QEG
2.62
43.03
140
6731
28
0
6563
0.007
0.013
6759
0.001
0.017
6023
1.416
1.653
9215
1.289
1.572
14050
7.286
5.000
859
34.485
22.881
295
18.387
15.000
1059
17.948
15.000
28
0.057
0.200
910
0.005
0.020
7565
0.001
0.020
1391
0.608
2.325
3442
0.608
2.325
3440
1.057
3.484
4293
1.057
3.484
4293
0.809
2.406
3317
0.809
2.406
3318
1.399
3.576
4921
3.117
44.118
26595
3.106
44.096
26566
0.337
0.278
2.684
100
1912
20
96.13
2.62
50.0
6MFJ
28247
0.99
0.150
0.096
1
13.0
3.4
98.0
0.391
2.62
2.67
2.6
1351
0.84
0.252
1
3.2
98.0
refinement
REFMAC
5.8.0232
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
N
Crystal structure of the ADCC potent antibody DH677.3 Fab elicited in the RV305 vaccine trial.
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
H
THR
28
A
THR
28
HELX_P
H
TYR
32
A
TYR
32
5
AA1
5
H
GLN
61
A
GLN
62
HELX_P
H
GLN
64
A
GLN
65
5
AA2
4
H
THR
73
A
THR
74
HELX_P
H
ILE
75
A
ILE
76
5
AA3
3
H
ARG
83
A
ARG
87
HELX_P
H
ASP
86
A
ASP
90
5
AA4
4
H
SER
187
A
SER
197
HELX_P
H
LEU
189
A
LEU
199
5
AA5
3
H
LYS
201
A
LYS
211
HELX_P
H
ASN
204
A
ASN
214
5
AA6
4
L
GLN
79
B
GLN
79
HELX_P
L
VAL
83
B
VAL
83
5
AA7
5
L
SER
121
B
SER
121
HELX_P
L
LYS
126
B
LYS
126
1
AA8
6
L
LYS
183
B
LYS
183
HELX_P
L
HIS
189
B
HIS
189
1
AA9
7
A
THR
28
C
THR
28
HELX_P
A
TYR
32
C
TYR
32
5
AB1
5
A
GLN
61
C
GLN
62
HELX_P
A
GLN
64
C
GLN
65
5
AB2
4
A
THR
73
C
THR
74
HELX_P
A
ILE
75
C
ILE
76
5
AB3
3
A
ARG
83
C
ARG
87
HELX_P
A
ASP
86
C
ASP
90
5
AB4
4
A
SER
156
C
SER
166
HELX_P
A
ALA
158
C
ALA
168
5
AB5
3
A
PRO
185
C
PRO
195
HELX_P
A
LEU
189
C
LEU
199
5
AB6
5
B
GLN
79
D
GLN
79
HELX_P
B
VAL
83
D
VAL
83
5
AB7
5
B
SER
121
D
SER
121
HELX_P
B
GLY
128
D
GLY
128
1
AB8
8
B
LYS
183
D
LYS
183
HELX_P
B
LYS
188
D
LYS
188
1
AB9
6
disulf
2.071
H
CYS
22
A
SG
CYS
22
1_555
H
CYS
92
A
SG
CYS
96
1_555
disulf
2.052
H
CYS
140
A
SG
CYS
150
1_555
H
CYS
196
A
SG
CYS
206
1_555
disulf
2.151
L
CYS
23
B
SG
CYS
23
1_555
L
CYS
88
B
SG
CYS
88
1_555
disulf
2.061
L
CYS
134
B
SG
CYS
134
1_555
L
CYS
194
B
SG
CYS
194
1_555
disulf
2.072
A
CYS
22
C
SG
CYS
22
1_555
A
CYS
92
C
SG
CYS
96
1_555
disulf
2.069
A
CYS
140
C
SG
CYS
150
1_555
A
CYS
196
C
SG
CYS
206
1_555
disulf
2.148
B
CYS
23
D
SG
CYS
23
1_555
B
CYS
88
D
SG
CYS
88
1_555
disulf
2.077
B
CYS
134
D
SG
CYS
134
1_555
B
CYS
194
D
SG
CYS
194
1_555
covale
1.501
one
N-Glycosylation
H
ASN
72
A
ND2
ASN
73
1_555
H
NAG
500
E
C1
NAG
1_555
covale
1.413
one
N-Glycosylation
A
ASN
72
C
ND2
ASN
73
1_555
A
NAG
500
F
C1
NAG
1_555
IMMUNE SYSTEM
ANTI-HIV-1 ENV ANTIBODY DH677.3, CD4I ANTIBODY, ADCC, HIV-1 ENV, IMMUNE SYSTEM, RV305 VACCINE TRIAL
H
PHE
146
A
PHE
156
1
H
PRO
147
A
PRO
157
-5.29
H
GLU
148
A
GLU
158
1
H
PRO
149
A
PRO
159
-1.87
L
SER
7
B
SER
7
1
L
PRO
8
B
PRO
8
-9.62
L
ALA
94
B
ALA
94
1
L
PRO
95
B
PRO
95
-0.37
L
TYR
140
B
TYR
140
1
L
PRO
141
B
PRO
141
6.15
A
PHE
146
C
PHE
156
1
A
PRO
147
C
PRO
157
-8.23
A
GLU
148
C
GLU
158
1
A
PRO
149
C
PRO
159
-7.51
B
SER
7
D
SER
7
1
B
PRO
8
D
PRO
8
-4.58
B
ALA
94
D
ALA
94
1
B
PRO
95
D
PRO
95
2.14
B
TYR
140
D
TYR
140
1
B
PRO
141
D
PRO
141
-2.09
6MFJ
PDB
1
1
6MFJ
6MFJ
PDB
2
1
6MFJ
1
218
6MFJ
1
218
6MFJ
H
1
1
228
1
214
6MFJ
1
214
6MFJ
L
2
1
214
1
218
6MFJ
1
218
6MFJ
A
1
1
228
1
214
6MFJ
1
214
6MFJ
B
2
1
214
4
6
4
4
4
3
4
6
4
4
4
6
4
4
4
3
4
6
4
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
H
GLN
3
A
GLN
3
H
GLN
6
A
GLN
6
H
VAL
18
A
VAL
18
H
SER
25
A
SER
25
H
THR
77
A
THR
78
H
LEU
82
A
LEU
83
H
VAL
67
A
VAL
68
H
ASN
72
A
ASN
73
H
GLU
10
A
GLU
10
H
GLN
12
A
GLN
12
H
THR
107
A
THR
117
H
VAL
111
A
VAL
121
H
ALA
88
A
ALA
92
H
THR
94
A
THR
98
H
ILE
34
A
ILE
34
H
ALA
40
A
ALA
40
H
GLU
46
A
GLU
46
H
MET
51
A
MET
51
H
THR
57
A
THR
58
H
TYR
59
A
TYR
60
H
GLU
10
A
GLU
10
H
GLN
12
A
GLN
12
H
THR
107
A
THR
117
H
VAL
111
A
VAL
121
H
ALA
88
A
ALA
92
H
THR
94
A
THR
98
H
TYR
102
A
TYR
112
H
TRP
103
A
TRP
113
H
SER
120
A
SER
130
H
LEU
124
A
LEU
134
H
THR
135
A
THR
145
H
TYR
145
A
TYR
155
H
TYR
176
A
TYR
186
H
PRO
185
A
PRO
195
H
VAL
163
A
VAL
173
H
THR
165
A
THR
175
H
SER
120
A
SER
130
H
LEU
124
A
LEU
134
H
THR
135
A
THR
145
H
TYR
145
A
TYR
155
H
TYR
176
A
TYR
186
H
PRO
185
A
PRO
195
H
VAL
169
A
VAL
179
H
LEU
170
A
LEU
180
H
THR
151
A
THR
161
H
TRP
154
A
TRP
164
H
ILE
195
A
ILE
205
H
HIS
200
A
HIS
210
H
THR
205
A
THR
215
H
ARG
210
A
ARG
220
L
LEU
4
B
LEU
4
L
SER
7
B
SER
7
L
VAL
19
B
VAL
19
L
ALA
25
B
ALA
25
L
ASP
70
B
ASP
70
L
ILE
75
B
ILE
75
L
PHE
62
B
PHE
62
L
SER
67
B
SER
67
L
SER
10
B
SER
10
L
ALA
13
B
ALA
13
L
THR
102
B
THR
102
L
ILE
106
B
ILE
106
L
ALA
84
B
ALA
84
L
LYS
90
B
LYS
90
L
LEU
33
B
LEU
33
L
GLN
38
B
GLN
38
L
GLU
45
B
GLU
45
L
TYR
49
B
TYR
49
L
THR
53
B
THR
53
L
LEU
54
B
LEU
54
L
SER
114
B
SER
114
L
PHE
118
B
PHE
118
L
THR
129
B
THR
129
L
PHE
139
B
PHE
139
L
TYR
173
B
TYR
173
L
SER
182
B
SER
182
L
SER
159
B
SER
159
L
VAL
163
B
VAL
163
L
ALA
153
B
ALA
153
L
LEU
154
B
LEU
154
L
ALA
144
B
ALA
144
L
VAL
150
B
VAL
150
L
VAL
191
B
VAL
191
L
HIS
198
B
HIS
198
L
VAL
205
B
VAL
205
L
ASN
210
B
ASN
210
A
GLN
3
C
GLN
3
A
GLN
6
C
GLN
6
A
VAL
18
C
VAL
18
A
SER
25
C
SER
25
A
THR
77
C
THR
78
A
LEU
82
C
LEU
83
A
VAL
67
C
VAL
68
A
ASN
72
C
ASN
73
A
GLU
10
C
GLU
10
A
GLN
12
C
GLN
12
A
THR
107
C
THR
117
A
VAL
111
C
VAL
121
A
ALA
88
C
ALA
92
A
TYR
95
C
TYR
99
A
ILE
34
C
ILE
34
A
ALA
40
C
ALA
40
A
LEU
45
C
LEU
45
A
MET
51
C
MET
51
A
THR
57
C
THR
58
A
TYR
59
C
TYR
60
A
GLU
10
C
GLU
10
A
GLN
12
C
GLN
12
A
THR
107
C
THR
117
A
VAL
111
C
VAL
121
A
ALA
88
C
ALA
92
A
TYR
95
C
TYR
99
A
PHE
100
C
PHE
110
A
TRP
103
C
TRP
113
F
A
SER
120
C
SER
130
A
LEU
124
C
LEU
134
A
ALA
136
C
ALA
146
A
TYR
145
C
TYR
155
A
TYR
176
C
TYR
186
A
VAL
184
C
VAL
194
A
VAL
163
C
VAL
173
A
THR
165
C
THR
175
A
SER
120
C
SER
130
A
LEU
124
C
LEU
134
A
ALA
136
C
ALA
146
A
TYR
145
C
TYR
155
A
TYR
176
C
TYR
186
A
VAL
184
C
VAL
194
A
VAL
169
C
VAL
179
A
LEU
170
C
LEU
180
A
VAL
150
C
VAL
160
A
TRP
154
C
TRP
164
A
TYR
194
C
TYR
204
A
HIS
200
C
HIS
210
A
THR
205
C
THR
215
A
VAL
211
C
VAL
221
B
LEU
4
D
LEU
4
B
SER
7
D
SER
7
B
VAL
19
D
VAL
19
B
ALA
25
D
ALA
25
B
ASP
70
D
ASP
70
B
ILE
75
D
ILE
75
B
PHE
62
D
PHE
62
B
SER
67
D
SER
67
B
SER
10
D
SER
10
B
SER
14
D
SER
14
B
THR
102
D
THR
102
B
LYS
107
D
LYS
107
B
ALA
84
D
ALA
84
B
LYS
90
D
LYS
90
B
LEU
33
D
LEU
33
B
GLN
38
D
GLN
38
B
GLU
45
D
GLU
45
B
TYR
49
D
TYR
49
B
THR
53
D
THR
53
B
LEU
54
D
LEU
54
B
SER
114
D
SER
114
B
PHE
118
D
PHE
118
B
THR
129
D
THR
129
B
PHE
139
D
PHE
139
B
TYR
173
D
TYR
173
B
SER
182
D
SER
182
B
SER
159
D
SER
159
B
VAL
163
D
VAL
163
B
ALA
153
D
ALA
153
B
LEU
154
D
LEU
154
B
LYS
145
D
LYS
145
B
VAL
150
D
VAL
150
B
VAL
191
D
VAL
191
B
THR
197
D
THR
197
B
VAL
205
D
VAL
205
B
ASN
210
D
ASN
210
4
P 1 21 1