0.011144
0.006434
0.000000
0.000000
0.012868
0.000000
0.000000
0.000000
0.016811
0.000000
0.000000
0.000000
Lormand, J.D.
Sondermann, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
89.734
89.734
59.485
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
N
N
39
S
C
N
40
N
C
N
41
N
O
N
42
N
C
N
43
N
O
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
N
N
52
S
C
N
53
N
C
N
54
N
O
N
55
N
C
N
56
N
C
N
57
N
C
N
58
N
N
N
59
N
C
N
60
N
N
N
61
N
N
N
62
N
O
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
N
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
R
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
S
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
O
N
126
N
P
N
127
N
O
N
128
N
O
N
129
N
O
N
130
N
C
N
131
R
C
N
132
N
O
N
133
S
C
N
134
N
O
N
135
R
C
N
136
N
O
N
137
R
C
Y
138
N
N
Y
139
N
C
Y
140
N
N
Y
141
N
C
N
142
N
C
N
143
N
O
N
144
N
N
N
145
N
C
N
146
N
N
N
147
N
N
Y
148
N
C
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
N
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
O
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
NA
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
N
371
N
O
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
N
N
381
S
C
N
382
N
C
N
383
N
O
N
384
R
C
N
385
N
O
N
386
N
C
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
N
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
N
N
425
S
C
N
426
N
C
N
427
N
O
N
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
C
N
435
N
O
N
436
N
O
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
N
N
449
S
C
N
450
N
C
N
451
N
O
N
452
N
C
N
453
N
C
N
454
N
C
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
Y
146
N
sing
Y
147
N
sing
Y
148
N
doub
N
149
N
sing
Y
150
N
sing
N
151
N
sing
Y
152
N
doub
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
Y
219
N
sing
Y
220
N
doub
Y
221
N
doub
N
222
N
sing
Y
223
N
sing
N
224
N
sing
Y
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
Y
327
N
doub
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
Y
331
N
doub
N
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
Y
401
N
sing
Y
402
N
sing
N
403
N
sing
Y
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
Y
424
N
doub
Y
425
N
sing
Y
426
N
sing
N
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
US
Elife
2050-084X
8
10.7554/eLife.46313
31225796
A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
2019
0000-0003-2211-6234
0000-0002-3593-0318
10.2210/pdb6n6d/pdb
pdb_00006n6d
100
1
N
PIXEL
2018-02-11
DECTRIS PILATUS 6M
Si(111) crystal
SINGLE WAVELENGTH
M
x-ray
1
0.977
1.0
F1
CHESS
0.977
SYNCHROTRON
CHESS BEAMLINE F1
20954.910
Oligoribonuclease
3.1.-.-
1
man
polymer
629.454
RNA (5'-R(P*AP*G)-3')
1
syn
polymer
22.990
SODIUM ION
1
syn
non-polymer
18.015
water
304
nat
water
no
no
MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQV
SEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLA
LDDIRESIAELQFYRKAVFKI
MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQV
SEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLA
LDDIRESIAELQFYRKAVFKI
A
polypeptide(L)
no
no
AG
AG
D
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
181
orn
666
Vibrio cholerae
469008
Escherichia coli BL21(DE3)
BL21DE3
Biological sequence
pET28a
1
3.20
61.60
VAPOR DIFFUSION, HANGING DROP
5.5
0.1 M BisTris (pH 5.5), 17% polyethylene glycol 3350, and 20% xylitol
293
citation
citation_author
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
repository
Initial release
Data collection
Database references
Author supporting evidence
Data collection
Database references
Derived calculations
Refinement description
1
0
2019-06-12
1
1
2019-10-16
1
2
2020-01-01
1
3
2023-10-11
_citation.country
_citation.journal_abbrev
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
R01GM123609
N
RCSB
Y
RCSB
2018-11-26
REL
REL
1
A
O
HOH
486
5.82
1
A
O
HOH
487
5.94
NA
SODIUM ION
HOH
water
32630
synthetic construct
sample
1
2
6N6A
PDB
experimental model
NA
1
3
NA
NA
701
D
HOH
303
4
HOH
HOH
201
A
HOH
237
4
HOH
HOH
202
A
HOH
238
4
HOH
HOH
203
A
HOH
156
4
HOH
HOH
204
A
HOH
187
4
HOH
HOH
205
A
HOH
299
4
HOH
HOH
206
A
HOH
292
4
HOH
HOH
207
A
HOH
220
4
HOH
HOH
208
A
HOH
131
4
HOH
HOH
209
A
HOH
119
4
HOH
HOH
210
A
HOH
65
4
HOH
HOH
211
A
HOH
78
4
HOH
HOH
212
A
HOH
146
4
HOH
HOH
213
A
HOH
177
4
HOH
HOH
214
A
HOH
42
4
HOH
HOH
215
A
HOH
160
4
HOH
HOH
216
A
HOH
3
4
HOH
HOH
217
A
HOH
267
4
HOH
HOH
218
A
HOH
28
4
HOH
HOH
219
A
HOH
15
4
HOH
HOH
220
A
HOH
139
4
HOH
HOH
221
A
HOH
97
4
HOH
HOH
222
A
HOH
141
4
HOH
HOH
223
A
HOH
109
4
HOH
HOH
224
A
HOH
66
4
HOH
HOH
225
A
HOH
108
4
HOH
HOH
226
A
HOH
144
4
HOH
HOH
227
A
HOH
251
4
HOH
HOH
228
A
HOH
67
4
HOH
HOH
229
A
HOH
198
4
HOH
HOH
230
A
HOH
151
4
HOH
HOH
231
A
HOH
23
4
HOH
HOH
232
A
HOH
68
4
HOH
HOH
233
A
HOH
41
4
HOH
HOH
234
A
HOH
116
4
HOH
HOH
235
A
HOH
27
4
HOH
HOH
236
A
HOH
129
4
HOH
HOH
237
A
HOH
81
4
HOH
HOH
238
A
HOH
136
4
HOH
HOH
239
A
HOH
14
4
HOH
HOH
240
A
HOH
270
4
HOH
HOH
241
A
HOH
217
4
HOH
HOH
242
A
HOH
83
4
HOH
HOH
243
A
HOH
31
4
HOH
HOH
244
A
HOH
130
4
HOH
HOH
245
A
HOH
22
4
HOH
HOH
246
A
HOH
104
4
HOH
HOH
247
A
HOH
121
4
HOH
HOH
248
A
HOH
1
4
HOH
HOH
249
A
HOH
118
4
HOH
HOH
250
A
HOH
140
4
HOH
HOH
251
A
HOH
63
4
HOH
HOH
252
A
HOH
37
4
HOH
HOH
253
A
HOH
191
4
HOH
HOH
254
A
HOH
125
4
HOH
HOH
255
A
HOH
60
4
HOH
HOH
256
A
HOH
143
4
HOH
HOH
257
A
HOH
232
4
HOH
HOH
258
A
HOH
89
4
HOH
HOH
259
A
HOH
161
4
HOH
HOH
260
A
HOH
33
4
HOH
HOH
261
A
HOH
88
4
HOH
HOH
262
A
HOH
74
4
HOH
HOH
263
A
HOH
94
4
HOH
HOH
264
A
HOH
287
4
HOH
HOH
265
A
HOH
181
4
HOH
HOH
266
A
HOH
87
4
HOH
HOH
267
A
HOH
184
4
HOH
HOH
268
A
HOH
51
4
HOH
HOH
269
A
HOH
273
4
HOH
HOH
270
A
HOH
80
4
HOH
HOH
271
A
HOH
202
4
HOH
HOH
272
A
HOH
100
4
HOH
HOH
273
A
HOH
224
4
HOH
HOH
274
A
HOH
86
4
HOH
HOH
275
A
HOH
128
4
HOH
HOH
276
A
HOH
57
4
HOH
HOH
277
A
HOH
18
4
HOH
HOH
278
A
HOH
30
4
HOH
HOH
279
A
HOH
26
4
HOH
HOH
280
A
HOH
102
4
HOH
HOH
281
A
HOH
114
4
HOH
HOH
282
A
HOH
148
4
HOH
HOH
283
A
HOH
48
4
HOH
HOH
284
A
HOH
275
4
HOH
HOH
285
A
HOH
52
4
HOH
HOH
286
A
HOH
24
4
HOH
HOH
287
A
HOH
35
4
HOH
HOH
288
A
HOH
77
4
HOH
HOH
289
A
HOH
101
4
HOH
HOH
290
A
HOH
21
4
HOH
HOH
291
A
HOH
59
4
HOH
HOH
292
A
HOH
235
4
HOH
HOH
293
A
HOH
34
4
HOH
HOH
294
A
HOH
36
4
HOH
HOH
295
A
HOH
8
4
HOH
HOH
296
A
HOH
258
4
HOH
HOH
297
A
HOH
75
4
HOH
HOH
298
A
HOH
49
4
HOH
HOH
299
A
HOH
84
4
HOH
HOH
300
A
HOH
91
4
HOH
HOH
301
A
HOH
262
4
HOH
HOH
302
A
HOH
79
4
HOH
HOH
303
A
HOH
234
4
HOH
HOH
304
A
HOH
29
4
HOH
HOH
305
A
HOH
145
4
HOH
HOH
306
A
HOH
56
4
HOH
HOH
307
A
HOH
46
4
HOH
HOH
308
A
HOH
127
4
HOH
HOH
309
A
HOH
233
4
HOH
HOH
310
A
HOH
165
4
HOH
HOH
311
A
HOH
192
4
HOH
HOH
312
A
HOH
212
4
HOH
HOH
313
A
HOH
69
4
HOH
HOH
314
A
HOH
7
4
HOH
HOH
315
A
HOH
16
4
HOH
HOH
316
A
HOH
167
4
HOH
HOH
317
A
HOH
70
4
HOH
HOH
318
A
HOH
73
4
HOH
HOH
319
A
HOH
5
4
HOH
HOH
320
A
HOH
152
4
HOH
HOH
321
A
HOH
134
4
HOH
HOH
322
A
HOH
47
4
HOH
HOH
323
A
HOH
169
4
HOH
HOH
324
A
HOH
53
4
HOH
HOH
325
A
HOH
142
4
HOH
HOH
326
A
HOH
17
4
HOH
HOH
327
A
HOH
54
4
HOH
HOH
328
A
HOH
25
4
HOH
HOH
329
A
HOH
40
4
HOH
HOH
330
A
HOH
72
4
HOH
HOH
331
A
HOH
246
4
HOH
HOH
332
A
HOH
58
4
HOH
HOH
333
A
HOH
153
4
HOH
HOH
334
A
HOH
176
4
HOH
HOH
335
A
HOH
206
4
HOH
HOH
336
A
HOH
44
4
HOH
HOH
337
A
HOH
296
4
HOH
HOH
338
A
HOH
43
4
HOH
HOH
339
A
HOH
120
4
HOH
HOH
340
A
HOH
95
4
HOH
HOH
341
A
HOH
282
4
HOH
HOH
342
A
HOH
124
4
HOH
HOH
343
A
HOH
4
4
HOH
HOH
344
A
HOH
38
4
HOH
HOH
345
A
HOH
135
4
HOH
HOH
346
A
HOH
268
4
HOH
HOH
347
A
HOH
138
4
HOH
HOH
348
A
HOH
92
4
HOH
HOH
349
A
HOH
256
4
HOH
HOH
350
A
HOH
113
4
HOH
HOH
351
A
HOH
293
4
HOH
HOH
352
A
HOH
50
4
HOH
HOH
353
A
HOH
209
4
HOH
HOH
354
A
HOH
55
4
HOH
HOH
355
A
HOH
196
4
HOH
HOH
356
A
HOH
76
4
HOH
HOH
357
A
HOH
99
4
HOH
HOH
358
A
HOH
174
4
HOH
HOH
359
A
HOH
115
4
HOH
HOH
360
A
HOH
231
4
HOH
HOH
361
A
HOH
133
4
HOH
HOH
362
A
HOH
225
4
HOH
HOH
363
A
HOH
216
4
HOH
HOH
364
A
HOH
180
4
HOH
HOH
365
A
HOH
71
4
HOH
HOH
366
A
HOH
105
4
HOH
HOH
367
A
HOH
39
4
HOH
HOH
368
A
HOH
269
4
HOH
HOH
369
A
HOH
13
4
HOH
HOH
370
A
HOH
32
4
HOH
HOH
371
A
HOH
211
4
HOH
HOH
372
A
HOH
300
4
HOH
HOH
373
A
HOH
215
4
HOH
HOH
374
A
HOH
126
4
HOH
HOH
375
A
HOH
195
4
HOH
HOH
376
A
HOH
203
4
HOH
HOH
377
A
HOH
208
4
HOH
HOH
378
A
HOH
266
4
HOH
HOH
379
A
HOH
182
4
HOH
HOH
380
A
HOH
204
4
HOH
HOH
381
A
HOH
45
4
HOH
HOH
382
A
HOH
241
4
HOH
HOH
383
A
HOH
157
4
HOH
HOH
384
A
HOH
290
4
HOH
HOH
385
A
HOH
103
4
HOH
HOH
386
A
HOH
154
4
HOH
HOH
387
A
HOH
193
4
HOH
HOH
388
A
HOH
284
4
HOH
HOH
389
A
HOH
278
4
HOH
HOH
390
A
HOH
264
4
HOH
HOH
391
A
HOH
305
4
HOH
HOH
392
A
HOH
197
4
HOH
HOH
393
A
HOH
250
4
HOH
HOH
394
A
HOH
255
4
HOH
HOH
395
A
HOH
207
4
HOH
HOH
396
A
HOH
213
4
HOH
HOH
397
A
HOH
283
4
HOH
HOH
398
A
HOH
150
4
HOH
HOH
399
A
HOH
229
4
HOH
HOH
400
A
HOH
122
4
HOH
HOH
401
A
HOH
301
4
HOH
HOH
402
A
HOH
240
4
HOH
HOH
403
A
HOH
166
4
HOH
HOH
404
A
HOH
137
4
HOH
HOH
405
A
HOH
261
4
HOH
HOH
406
A
HOH
85
4
HOH
HOH
407
A
HOH
304
4
HOH
HOH
408
A
HOH
199
4
HOH
HOH
409
A
HOH
254
4
HOH
HOH
410
A
HOH
272
4
HOH
HOH
411
A
HOH
171
4
HOH
HOH
412
A
HOH
218
4
HOH
HOH
413
A
HOH
158
4
HOH
HOH
414
A
HOH
194
4
HOH
HOH
415
A
HOH
308
4
HOH
HOH
416
A
HOH
263
4
HOH
HOH
417
A
HOH
200
4
HOH
HOH
418
A
HOH
236
4
HOH
HOH
419
A
HOH
190
4
HOH
HOH
420
A
HOH
247
4
HOH
HOH
421
A
HOH
90
4
HOH
HOH
422
A
HOH
230
4
HOH
HOH
423
A
HOH
214
4
HOH
HOH
424
A
HOH
183
4
HOH
HOH
425
A
HOH
281
4
HOH
HOH
426
A
HOH
253
4
HOH
HOH
427
A
HOH
248
4
HOH
HOH
428
A
HOH
9
4
HOH
HOH
429
A
HOH
228
4
HOH
HOH
430
A
HOH
178
4
HOH
HOH
431
A
HOH
112
4
HOH
HOH
432
A
HOH
164
4
HOH
HOH
433
A
HOH
96
4
HOH
HOH
434
A
HOH
106
4
HOH
HOH
435
A
HOH
111
4
HOH
HOH
436
A
HOH
107
4
HOH
HOH
437
A
HOH
163
4
HOH
HOH
438
A
HOH
222
4
HOH
HOH
439
A
HOH
162
4
HOH
HOH
440
A
HOH
98
4
HOH
HOH
441
A
HOH
242
4
HOH
HOH
442
A
HOH
172
4
HOH
HOH
443
A
HOH
175
4
HOH
HOH
444
A
HOH
260
4
HOH
HOH
445
A
HOH
291
4
HOH
HOH
446
A
HOH
257
4
HOH
HOH
447
A
HOH
243
4
HOH
HOH
448
A
HOH
221
4
HOH
HOH
449
A
HOH
286
4
HOH
HOH
450
A
HOH
297
4
HOH
HOH
451
A
HOH
201
4
HOH
HOH
452
A
HOH
155
4
HOH
HOH
453
A
HOH
64
4
HOH
HOH
454
A
HOH
93
4
HOH
HOH
455
A
HOH
173
4
HOH
HOH
456
A
HOH
170
4
HOH
HOH
457
A
HOH
149
4
HOH
HOH
458
A
HOH
279
4
HOH
HOH
459
A
HOH
302
4
HOH
HOH
460
A
HOH
307
4
HOH
HOH
461
A
HOH
61
4
HOH
HOH
462
A
HOH
110
4
HOH
HOH
463
A
HOH
82
4
HOH
HOH
464
A
HOH
186
4
HOH
HOH
465
A
HOH
294
4
HOH
HOH
466
A
HOH
280
4
HOH
HOH
467
A
HOH
132
4
HOH
HOH
468
A
HOH
147
4
HOH
HOH
469
A
HOH
289
4
HOH
HOH
470
A
HOH
306
4
HOH
HOH
471
A
HOH
285
4
HOH
HOH
472
A
HOH
62
4
HOH
HOH
473
A
HOH
252
4
HOH
HOH
474
A
HOH
259
4
HOH
HOH
475
A
HOH
185
4
HOH
HOH
476
A
HOH
219
4
HOH
HOH
477
A
HOH
276
4
HOH
HOH
478
A
HOH
159
4
HOH
HOH
479
A
HOH
244
4
HOH
HOH
480
A
HOH
271
4
HOH
HOH
481
A
HOH
274
4
HOH
HOH
482
A
HOH
249
4
HOH
HOH
483
A
HOH
295
4
HOH
HOH
484
A
HOH
189
4
HOH
HOH
485
A
HOH
210
4
HOH
HOH
486
A
HOH
179
4
HOH
HOH
487
A
HOH
20
4
HOH
HOH
801
D
HOH
10
4
HOH
HOH
802
D
HOH
11
4
HOH
HOH
803
D
HOH
205
4
HOH
HOH
804
D
HOH
6
4
HOH
HOH
805
D
HOH
239
4
HOH
HOH
806
D
HOH
223
4
HOH
HOH
807
D
HOH
226
4
HOH
HOH
808
D
HOH
123
4
HOH
HOH
809
D
HOH
117
4
HOH
HOH
810
D
HOH
298
4
HOH
HOH
811
D
HOH
2
4
HOH
HOH
812
D
HOH
265
4
HOH
HOH
813
D
HOH
188
4
HOH
HOH
814
D
HOH
12
4
HOH
HOH
815
D
HOH
168
4
HOH
HOH
816
D
HOH
227
4
HOH
HOH
817
D
MET
1
n
1
MET
1
A
SER
2
n
2
SER
2
A
PHE
3
n
3
PHE
3
A
SER
4
n
4
SER
4
A
ASP
5
n
5
ASP
5
A
GLN
6
n
6
GLN
6
A
ASN
7
n
7
ASN
7
A
LEU
8
n
8
LEU
8
A
ILE
9
n
9
ILE
9
A
TRP
10
n
10
TRP
10
A
ILE
11
n
11
ILE
11
A
ASP
12
n
12
ASP
12
A
LEU
13
n
13
LEU
13
A
GLU
14
n
14
GLU
14
A
MET
15
n
15
MET
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
LEU
18
n
18
LEU
18
A
ASP
19
n
19
ASP
19
A
PRO
20
n
20
PRO
20
A
GLU
21
n
21
GLU
21
A
MET
22
n
22
MET
22
A
HIS
23
n
23
HIS
23
A
LYS
24
n
24
LYS
24
A
ILE
25
n
25
ILE
25
A
ILE
26
n
26
ILE
26
A
GLU
27
n
27
GLU
27
A
MET
28
n
28
MET
28
A
ALA
29
n
29
ALA
29
A
THR
30
n
30
THR
30
A
ILE
31
n
31
ILE
31
A
VAL
32
n
32
VAL
32
A
THR
33
n
33
THR
33
A
ASP
34
n
34
ASP
34
A
SER
35
n
35
SER
35
A
GLU
36
n
36
GLU
36
A
LEU
37
n
37
LEU
37
A
ASN
38
n
38
ASN
38
A
ILE
39
n
39
ILE
39
A
LEU
40
n
40
LEU
40
A
ALA
41
n
41
ALA
41
A
GLU
42
n
42
GLU
42
A
GLY
43
n
43
GLY
43
A
PRO
44
n
44
PRO
44
A
VAL
45
n
45
VAL
45
A
ILE
46
n
46
ILE
46
A
ALA
47
n
47
ALA
47
A
ILE
48
n
48
ILE
48
A
HIS
49
n
49
HIS
49
A
GLN
50
n
50
GLN
50
A
PRO
51
n
51
PRO
51
A
GLU
52
n
52
GLU
52
A
SER
53
n
53
SER
53
A
GLU
54
n
54
GLU
54
A
LEU
55
n
55
LEU
55
A
ALA
56
n
56
ALA
56
A
LYS
57
n
57
LYS
57
A
MET
58
n
58
MET
58
A
ASP
59
n
59
ASP
59
A
GLU
60
n
60
GLU
60
A
TRP
61
n
61
TRP
61
A
CYS
62
n
62
CYS
62
A
THR
63
n
63
THR
63
A
THR
64
n
64
THR
64
A
THR
65
n
65
THR
65
A
HIS
66
n
66
HIS
66
A
THR
67
n
67
THR
67
A
ALA
68
n
68
ALA
68
A
SER
69
n
69
SER
69
A
GLY
70
n
70
GLY
70
A
LEU
71
n
71
LEU
71
A
VAL
72
n
72
VAL
72
A
ALA
73
n
73
ALA
73
A
ARG
74
n
74
ARG
74
A
VAL
75
n
75
VAL
75
A
ARG
76
n
76
ARG
76
A
GLN
77
n
77
GLN
77
A
SER
78
n
78
SER
78
A
GLN
79
n
79
GLN
79
A
VAL
80
n
80
VAL
80
A
SER
81
n
81
SER
81
A
GLU
82
n
82
GLU
82
A
GLU
83
n
83
GLU
83
A
GLU
84
n
84
GLU
84
A
ALA
85
n
85
ALA
85
A
ILE
86
n
86
ILE
86
A
ASP
87
n
87
ASP
87
A
GLN
88
n
88
GLN
88
A
THR
89
n
89
THR
89
A
LEU
90
n
90
LEU
90
A
ALA
91
n
91
ALA
91
A
PHE
92
n
92
PHE
92
A
LEU
93
n
93
LEU
93
A
LYS
94
n
94
LYS
94
A
GLN
95
n
95
GLN
95
A
TRP
96
n
96
TRP
96
A
VAL
97
n
97
VAL
97
A
PRO
98
n
98
PRO
98
A
GLU
99
n
99
GLU
99
A
GLY
100
n
100
GLY
100
A
LYS
101
n
101
LYS
101
A
SER
102
n
102
SER
102
A
PRO
103
n
103
PRO
103
A
ILE
104
n
104
ILE
104
A
CYS
105
n
105
CYS
105
A
GLY
106
n
106
GLY
106
A
ASN
107
n
107
ASN
107
A
SER
108
n
108
SER
108
A
ILE
109
n
109
ILE
109
A
GLY
110
n
110
GLY
110
A
GLN
111
n
111
GLN
111
A
ASP
112
n
112
ASP
112
A
ARG
113
n
113
ARG
113
A
ARG
114
n
114
ARG
114
A
PHE
115
n
115
PHE
115
A
LEU
116
n
116
LEU
116
A
TYR
117
n
117
TYR
117
A
LYS
118
n
118
LYS
118
A
HIS
119
n
119
HIS
119
A
MET
120
n
120
MET
120
A
PRO
121
n
121
PRO
121
A
ARG
122
n
122
ARG
122
A
LEU
123
n
123
LEU
123
A
GLU
124
n
124
GLU
124
A
ALA
125
n
125
ALA
125
A
TYR
126
n
126
TYR
126
A
PHE
127
n
127
PHE
127
A
HIS
128
n
128
HIS
128
A
TYR
129
n
129
TYR
129
A
ARG
130
n
130
ARG
130
A
TYR
131
n
131
TYR
131
A
ILE
132
n
132
ILE
132
A
ASP
133
n
133
ASP
133
A
VAL
134
n
134
VAL
134
A
SER
135
n
135
SER
135
A
THR
136
n
136
THR
136
A
ILE
137
n
137
ILE
137
A
LYS
138
n
138
LYS
138
A
GLU
139
n
139
GLU
139
A
LEU
140
n
140
LEU
140
A
THR
141
n
141
THR
141
A
ARG
142
n
142
ARG
142
A
ARG
143
n
143
ARG
143
A
TRP
144
n
144
TRP
144
A
GLN
145
n
145
GLN
145
A
PRO
146
n
146
PRO
146
A
GLU
147
n
147
GLU
147
A
VAL
148
n
148
VAL
148
A
LEU
149
n
149
LEU
149
A
LYS
150
n
150
LYS
150
A
GLU
151
n
151
GLU
151
A
PHE
152
n
152
PHE
152
A
SER
153
n
153
SER
153
A
LYS
154
n
154
LYS
154
A
THR
155
n
155
THR
155
A
GLY
156
n
156
GLY
156
A
SER
157
n
157
SER
157
A
HIS
158
n
158
HIS
158
A
LEU
159
n
159
LEU
159
A
ALA
160
n
160
ALA
160
A
LEU
161
n
161
LEU
161
A
ASP
162
n
162
ASP
162
A
ASP
163
n
163
ASP
163
A
ILE
164
n
164
ILE
164
A
ARG
165
n
165
ARG
165
A
GLU
166
n
166
GLU
166
A
SER
167
n
167
SER
167
A
ILE
168
n
168
ILE
168
A
ALA
169
n
169
ALA
169
A
GLU
170
n
170
GLU
170
A
LEU
171
n
171
LEU
171
A
GLN
172
n
172
GLN
172
A
PHE
173
n
173
PHE
173
A
TYR
174
n
174
TYR
174
A
ARG
175
n
175
ARG
175
A
LYS
176
n
176
LYS
176
A
ALA
177
n
177
ALA
177
A
VAL
178
n
178
VAL
178
A
PHE
179
n
179
PHE
179
A
LYS
180
n
180
LYS
180
A
ILE
181
n
181
ILE
181
A
A
603
n
1
A
603
D
G
604
n
2
G
604
D
4.5638
-1.8592
-1.7503
3.5558
1.2081
2.1060
-0.0060
0.1008
-0.0715
-0.2059
-0.0162
-0.0665
0.0308
-0.0205
0.0730
0.1582
-0.0066
-0.0145
0.0873
0.0052
0.0852
refined
-44.2248
6.6454
1.0769
X-RAY DIFFRACTION
1.7297
-0.9676
-1.4743
1.5552
0.7622
1.8168
0.0492
0.1431
0.0002
-0.1901
-0.0564
0.0210
-0.0715
-0.1853
0.0143
0.1767
-0.0050
-0.0070
0.1353
0.0039
0.1260
refined
-47.3122
14.0414
-2.0992
X-RAY DIFFRACTION
1.3655
-0.2776
0.3745
1.4854
-0.6420
1.1307
-0.0493
-0.0317
0.0030
0.0287
-0.0490
-0.2277
-0.1073
0.1016
0.1047
0.1685
-0.0129
0.0156
0.1411
-0.0056
0.1643
refined
-35.1196
6.2462
6.6883
X-RAY DIFFRACTION
A
1
A
24
X-RAY DIFFRACTION
1
(chain A and resid 1:24)
A
25
A
99
X-RAY DIFFRACTION
2
(chain A and resid 25:99)
A
100
A
181
X-RAY DIFFRACTION
3
(chain A and resid 100:181)
author_and_software_defined_assembly
PISA
2
dimeric
light scattering
1120
-22
9150
A
ASP
12
A
OD1
ASP
12
1_555
D
NA
701
C
NA
NA
1_555
A
HOH
217
D
O
HOH
1_555
93.7
A
ASP
12
A
OD1
ASP
12
1_555
D
NA
701
C
NA
NA
1_555
A
HOH
249
D
O
HOH
1_555
85.5
A
HOH
217
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
A
HOH
249
D
O
HOH
1_555
86.1
A
ASP
12
A
OD1
ASP
12
1_555
D
NA
701
C
NA
NA
1_555
D
A
603
B
O3'
A
1
1_555
155.3
A
HOH
217
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
D
A
603
B
O3'
A
1
1_555
108.1
A
HOH
249
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
D
A
603
B
O3'
A
1
1_555
84.7
A
ASP
12
A
OD1
ASP
12
1_555
D
NA
701
C
NA
NA
1_555
D
G
604
B
OP1
G
2
1_555
101.9
A
HOH
217
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
D
G
604
B
OP1
G
2
1_555
164.3
A
HOH
249
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
D
G
604
B
OP1
G
2
1_555
95.7
D
A
603
B
O3'
A
1
1_555
D
NA
701
C
NA
NA
1_555
D
G
604
B
OP1
G
2
1_555
56.7
A
ASP
12
A
OD1
ASP
12
1_555
D
NA
701
C
NA
NA
1_555
D
HOH
812
E
O
HOH
1_555
86.9
A
HOH
217
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
D
HOH
812
E
O
HOH
1_555
96.0
A
HOH
249
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
D
HOH
812
E
O
HOH
1_555
172.2
D
A
603
B
O3'
A
1
1_555
D
NA
701
C
NA
NA
1_555
D
HOH
812
E
O
HOH
1_555
101.7
D
G
604
B
OP1
G
2
1_555
D
NA
701
C
NA
NA
1_555
D
HOH
812
E
O
HOH
1_555
84.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
43
A
O
GLY
43
A
N
THR
30
A
N
THR
30
A
O
ILE
31
A
O
ILE
31
A
N
TRP
10
A
N
TRP
10
A
N
ILE
11
A
N
ILE
11
A
O
CYS
105
A
O
CYS
105
A
N
ILE
104
A
N
ILE
104
A
O
ILE
132
A
O
ILE
132
1
A
HOH
482
D
HOH
1
A
HOH
483
D
HOH
1
A
CG
MET
1
A
CG
MET
1
1
Y
1
A
SD
MET
1
A
SD
MET
1
1
Y
1
A
CE
MET
1
A
CE
MET
1
1
Y
1
D
D
P
OP3
A
A
603
603
-0.127
0.012
1.607
1.480
N
1
A
SER
2
-83.99
33.34
1
A
MET
120
-141.50
55.29
1
A
GLN
145
-157.60
75.12
79.890
24.4259
12.300
0.1578
0.1452
0.1459
1.5340
44.8670
2081
41592
5.0000
99.8100
0.1300
1
THROUGHOUT
1.340
MOLECULAR REPLACEMENT
15.3600
0.9000
1.1100
6N6A
1.5340
44.8670
308
1824
16.01
38.54
1
46
1469
183
0.2366
0.0000
0.2260
1.5697
134
2563
2697
15
97.0000
0.1988
0.0000
0.1897
1.6090
137
2606
2743
15
100.0000
0.2390
0.0000
0.1813
1.6525
140
2618
2758
15
100.0000
0.1818
0.0000
0.1669
1.7011
135
2594
2729
15
100.0000
0.1843
0.0000
0.1638
1.7560
138
2613
2751
15
100.0000
0.1771
0.0000
0.1627
1.8188
135
2620
2755
15
100.0000
0.1523
0.0000
0.1510
1.8916
136
2621
2757
15
100.0000
0.1493
0.0000
0.1481
1.9777
138
2620
2758
15
100.0000
0.1784
0.0000
0.1444
2.0820
138
2623
2761
15
100.0000
0.1633
0.0000
0.1425
2.2124
141
2625
2766
15
100.0000
0.1455
0.0000
0.1428
2.3832
139
2651
2790
15
100.0000
0.1497
0.0000
0.1469
2.6230
138
2647
2785
15
100.0000
0.1408
0.0000
0.1417
3.0025
140
2658
2798
15
100.0000
0.1465
0.0000
0.1328
3.7825
144
2678
2822
15
100.0000
0.1535
0.0000
0.1349
44.8862
148
2774
2922
15
100.0000
1.534
47.235
6N6D
41621
41621
0.022
0.076
0.072
1
7.900
19.400
493098
11.800
99.800
0.894
1.534
1.620
0.900
5965
0.275
0.936
0.894
1
11.200
98.800
0.611
1.620
1.720
1.300
5702
0.182
0.638
0.611
1
12.000
100.000
0.407
1.720
1.830
1.900
5358
0.122
0.425
0.407
1
11.900
100.000
0.239
1.830
1.980
3.200
5006
0.071
0.250
0.239
1
12.100
100.000
0.137
1.980
2.170
5.600
4616
0.041
0.142
0.137
1
12.200
100.000
0.092
2.170
2.430
8.000
4183
0.028
0.097
0.092
1
12.000
100.000
0.065
2.430
2.800
10.900
3730
0.019
0.068
0.065
1
12.100
100.000
0.044
2.800
3.430
14.600
3153
0.014
0.046
0.044
1
11.700
100.000
0.034
3.430
4.850
17.600
2476
0.010
0.036
0.034
1
11.500
100.000
0.028
4.850
47.235
20.900
1432
0.008
0.029
0.028
1
11.400
99.800
data reduction
XDS
data scaling
SCALA
3.3.22
refinement
PHENIX
1.14_3260
data extraction
PDB_EXTRACT
3.24
phasing
PHENIX
N
Vibrio cholerae Oligoribonuclease bound to pAG
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
PRO
51
A
PRO
51
HELX_P
A
ALA
56
A
ALA
56
1
AA1
6
A
ASP
59
A
ASP
59
HELX_P
A
SER
69
A
SER
69
1
AA2
11
A
GLY
70
A
GLY
70
HELX_P
A
SER
78
A
SER
78
1
AA3
9
A
SER
81
A
SER
81
HELX_P
A
LYS
94
A
LYS
94
1
AA4
14
A
SER
108
A
SER
108
HELX_P
A
MET
120
A
MET
120
1
AA5
13
A
MET
120
A
MET
120
HELX_P
A
ALA
125
A
ALA
125
1
AA6
6
A
VAL
134
A
VAL
134
HELX_P
A
GLN
145
A
GLN
145
1
AA7
12
A
PRO
146
A
PRO
146
HELX_P
A
PHE
152
A
PHE
152
5
AA8
7
A
LEU
159
A
LEU
159
HELX_P
A
VAL
178
A
VAL
178
1
AA9
20
metalc
2.347
A
ASP
12
A
OD1
ASP
12
1_555
D
NA
701
C
NA
NA
1_555
metalc
2.359
A
HOH
217
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
metalc
2.396
A
HOH
249
D
O
HOH
1_555
D
NA
701
C
NA
NA
1_555
metalc
2.644
D
A
603
B
O3'
A
1
1_555
D
NA
701
C
NA
NA
1_555
metalc
2.456
D
G
604
B
OP1
G
2
1_555
D
NA
701
C
NA
NA
1_555
metalc
2.333
D
NA
701
C
NA
NA
1_555
D
HOH
812
E
O
HOH
1_555
rna binding protein/rna
3'-5' exoribonuclease, RNA BINDING PROTEIN, rna binding protein-rna complex
A0A0H6V4D7_VIBCL
UNP
1
1
A0A0H6V4D7
MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQV
SEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLA
LDDIRESIAELQFYRKAVFKI
6N6D
PDB
2
1
6N6D
1
181
6N6D
1
181
A0A0H6V4D7
A
1
1
181
603
604
6N6D
603
604
6N6D
D
2
1
2
5
anti-parallel
anti-parallel
parallel
parallel
A
ILE
39
A
ILE
39
A
ALA
47
A
ALA
47
A
ILE
25
A
ILE
25
A
THR
33
A
THR
33
A
LEU
8
A
LEU
8
A
MET
15
A
MET
15
A
ILE
104
A
ILE
104
A
GLY
106
A
GLY
106
A
TYR
131
A
TYR
131
A
ASP
133
A
ASP
133
binding site for residue NA D 701
D
NA
701
Software
6
A
ASP
12
A
ASP
12
6
1_555
A
HOH
217
D
HOH
6
1_555
A
HOH
249
D
HOH
6
1_555
D
A
603
B
A
1
6
1_555
D
G
604
B
G
2
6
1_555
D
HOH
812
E
HOH
6
1_555
154
P 32 2 1