0.016980 0.000000 0.000000 -0.000000 0.015781 0.000000 0.000000 -0.000000 0.009987 0.00000 0.00000 0.00000 Miller, D.J. Watson, E.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 58.893 63.368 100.135 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 1091-6490 116 17280 17289 10.1073/pnas.1902889116 31350353 Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site. 2019 10.2210/pdb6nxk/pdb pdb_00006nxk 100 1 N PIXEL 2015-08-03 DECTRIS PILATUS 6M-F SINGLE WAVELENGTH M x-ray 1 0.97920 1.0 24-ID-C APS 0.97920 SYNCHROTRON APS BEAMLINE 24-ID-C 8576.831 Polyubiquitin-C 2 man polymer 10259.662 Anaphase-promoting complex subunit 2 WHB domain 2 man polymer 18.015 water 116 nat water APC2,Cyclosome subunit 2 no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG A,B polypeptide(L) no no GSESDSGMASQADQKEEELLLFWTYIQAMLTNLESLSLDRIYNMLRMFVVTGPALAEIDLQELQGYLQKKVRDQQLVYSA GVYRLPKNCS GSESDSGMASQADQKEEELLLFWTYIQAMLTNLESLSLDRIYNMLRMFVVTGPALAEIDLQELQGYLQKKVRDQQLVYSA GVYRLPKNCS C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 76 UBC 9606 Homo sapiens 1182032 Escherichia coli-Pichia pastoris shuttle vector pPpARG4 BL21(DE3)-RIL Biological sequence Human sample 1 90 ANAPC2, APC2, KIAA1406 9606 Homo sapiens 1182032 Escherichia coli-Pichia pastoris shuttle vector pPpARG4 BL21(DE3)-RIL Biological sequence 1 2.50 50.78 VAPOR DIFFUSION, HANGING DROP 0.1M HEPES pH 7.7, 27.5% PEG3350, 2.5mM APC2 WHB (735-C) + 2.08mM Ubiquitin protein co-mixed 277.15 citation citation_author chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Database references Data collection Database references Refinement description 1 0 2020-01-15 1 1 2021-02-03 1 2 2023-10-11 _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _database_2.pdbx_DOI _database_2.pdbx_database_accession N RCSB Y RCSB 2019-02-08 REL REL HOH water 4S1Z 4s1z, 4YII chain A PDB experimental model 4YII 4s1z, 4YII chain A PDB experimental model HOH 116 3 HOH HOH 101 A HOH 115 3 HOH HOH 102 A HOH 90 3 HOH HOH 103 A HOH 61 3 HOH HOH 104 A HOH 35 3 HOH HOH 105 A HOH 17 3 HOH HOH 106 A HOH 73 3 HOH HOH 107 A HOH 89 3 HOH HOH 108 A HOH 110 3 HOH HOH 109 A HOH 42 3 HOH HOH 110 A HOH 34 3 HOH HOH 111 A HOH 114 3 HOH HOH 112 A HOH 3 3 HOH HOH 113 A HOH 28 3 HOH HOH 114 A HOH 29 3 HOH HOH 115 A HOH 25 3 HOH HOH 116 A HOH 66 3 HOH HOH 117 A HOH 38 3 HOH HOH 118 A HOH 49 3 HOH HOH 119 A HOH 109 3 HOH HOH 120 A HOH 58 3 HOH HOH 121 A HOH 6 3 HOH HOH 101 B HOH 93 3 HOH HOH 102 B HOH 101 3 HOH HOH 103 B HOH 30 3 HOH HOH 104 B HOH 113 3 HOH HOH 105 B HOH 23 3 HOH HOH 106 B HOH 86 3 HOH HOH 107 B HOH 26 3 HOH HOH 108 B HOH 67 3 HOH HOH 109 B HOH 96 3 HOH HOH 110 B HOH 112 3 HOH HOH 111 B HOH 74 3 HOH HOH 112 B HOH 51 3 HOH HOH 113 B HOH 79 3 HOH HOH 114 B HOH 37 3 HOH HOH 115 B HOH 59 3 HOH HOH 116 B HOH 52 3 HOH HOH 117 B HOH 44 3 HOH HOH 118 B HOH 27 3 HOH HOH 119 B HOH 100 3 HOH HOH 120 B HOH 107 3 HOH HOH 121 B HOH 47 3 HOH HOH 122 B HOH 78 3 HOH HOH 123 B HOH 88 3 HOH HOH 901 C HOH 81 3 HOH HOH 902 C HOH 16 3 HOH HOH 903 C HOH 70 3 HOH HOH 904 C HOH 31 3 HOH HOH 905 C HOH 99 3 HOH HOH 906 C HOH 106 3 HOH HOH 907 C HOH 91 3 HOH HOH 908 C HOH 69 3 HOH HOH 909 C HOH 48 3 HOH HOH 910 C HOH 103 3 HOH HOH 911 C HOH 46 3 HOH HOH 912 C HOH 87 3 HOH HOH 913 C HOH 19 3 HOH HOH 914 C HOH 8 3 HOH HOH 915 C HOH 62 3 HOH HOH 916 C HOH 4 3 HOH HOH 917 C HOH 84 3 HOH HOH 918 C HOH 104 3 HOH HOH 919 C HOH 64 3 HOH HOH 920 C HOH 39 3 HOH HOH 921 C HOH 68 3 HOH HOH 922 C HOH 9 3 HOH HOH 923 C HOH 85 3 HOH HOH 924 C HOH 83 3 HOH HOH 925 C HOH 105 3 HOH HOH 926 C HOH 7 3 HOH HOH 927 C HOH 43 3 HOH HOH 928 C HOH 33 3 HOH HOH 929 C HOH 12 3 HOH HOH 930 C HOH 45 3 HOH HOH 931 C HOH 22 3 HOH HOH 932 C HOH 57 3 HOH HOH 933 C HOH 94 3 HOH HOH 934 C HOH 60 3 HOH HOH 935 C HOH 11 3 HOH HOH 936 C HOH 24 3 HOH HOH 937 C HOH 5 3 HOH HOH 938 C HOH 14 3 HOH HOH 939 C HOH 72 3 HOH HOH 940 C HOH 76 3 HOH HOH 941 C HOH 18 3 HOH HOH 942 C HOH 80 3 HOH HOH 943 C HOH 77 3 HOH HOH 944 C HOH 63 3 HOH HOH 945 C HOH 32 3 HOH HOH 946 C HOH 75 3 HOH HOH 947 C HOH 36 3 HOH HOH 901 D HOH 82 3 HOH HOH 902 D HOH 20 3 HOH HOH 903 D HOH 92 3 HOH HOH 904 D HOH 21 3 HOH HOH 905 D HOH 10 3 HOH HOH 906 D HOH 1 3 HOH HOH 907 D HOH 41 3 HOH HOH 908 D HOH 15 3 HOH HOH 909 D HOH 97 3 HOH HOH 910 D HOH 13 3 HOH HOH 911 D HOH 108 3 HOH HOH 912 D HOH 53 3 HOH HOH 913 D HOH 50 3 HOH HOH 914 D HOH 55 3 HOH HOH 915 D HOH 40 3 HOH HOH 916 D HOH 95 3 HOH HOH 917 D HOH 56 3 HOH HOH 918 D HOH 2 3 HOH HOH 919 D HOH 54 3 HOH HOH 920 D HOH 111 3 HOH HOH 921 D HOH 65 3 HOH HOH 922 D HOH 98 3 HOH HOH 923 D HOH 102 3 HOH HOH 924 D HOH 71 3 HOH HOH 925 D MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A PHE 4 n 4 PHE 4 A VAL 5 n 5 VAL 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A LEU 8 n 8 LEU 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A LYS 11 n 11 LYS 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A THR 14 n 14 THR 14 A LEU 15 n 15 LEU 15 A GLU 16 n 16 GLU 16 A VAL 17 n 17 VAL 17 A GLU 18 n 18 GLU 18 A PRO 19 n 19 PRO 19 A SER 20 n 20 SER 20 A ASP 21 n 21 ASP 21 A THR 22 n 22 THR 22 A ILE 23 n 23 ILE 23 A GLU 24 n 24 GLU 24 A ASN 25 n 25 ASN 25 A VAL 26 n 26 VAL 26 A LYS 27 n 27 LYS 27 A ALA 28 n 28 ALA 28 A LYS 29 n 29 LYS 29 A ILE 30 n 30 ILE 30 A GLN 31 n 31 GLN 31 A ASP 32 n 32 ASP 32 A LYS 33 n 33 LYS 33 A GLU 34 n 34 GLU 34 A GLY 35 n 35 GLY 35 A ILE 36 n 36 ILE 36 A PRO 37 n 37 PRO 37 A PRO 38 n 38 PRO 38 A ASP 39 n 39 ASP 39 A GLN 40 n 40 GLN 40 A GLN 41 n 41 GLN 41 A ARG 42 n 42 ARG 42 A LEU 43 n 43 LEU 43 A ILE 44 n 44 ILE 44 A PHE 45 n 45 PHE 45 A ALA 46 n 46 ALA 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A GLN 49 n 49 GLN 49 A LEU 50 n 50 LEU 50 A GLU 51 n 51 GLU 51 A ASP 52 n 52 ASP 52 A GLY 53 n 53 GLY 53 A ARG 54 n 54 ARG 54 A THR 55 n 55 THR 55 A LEU 56 n 56 LEU 56 A SER 57 n 57 SER 57 A ASP 58 n 58 ASP 58 A TYR 59 n 59 TYR 59 A ASN 60 n 60 ASN 60 A ILE 61 n 61 ILE 61 A GLN 62 n 62 GLN 62 A LYS 63 n 63 LYS 63 A GLU 64 n 64 GLU 64 A SER 65 n 65 SER 65 A THR 66 n 66 THR 66 A LEU 67 n 67 LEU 67 A HIS 68 n 68 HIS 68 A LEU 69 n 69 LEU 69 A VAL 70 n 70 VAL 70 A LEU 71 n 71 LEU 71 A ARG 72 n 72 ARG 72 A LEU 73 n 73 LEU 73 A n 74 74 A n 75 75 A n 76 76 A MET 1 n 1 MET 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B PHE 4 n 4 PHE 4 B VAL 5 n 5 VAL 5 B LYS 6 n 6 LYS 6 B THR 7 n 7 THR 7 B LEU 8 n 8 LEU 8 B THR 9 n 9 THR 9 B GLY 10 n 10 GLY 10 B LYS 11 n 11 LYS 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B THR 14 n 14 THR 14 B LEU 15 n 15 LEU 15 B GLU 16 n 16 GLU 16 B VAL 17 n 17 VAL 17 B GLU 18 n 18 GLU 18 B PRO 19 n 19 PRO 19 B SER 20 n 20 SER 20 B ASP 21 n 21 ASP 21 B THR 22 n 22 THR 22 B ILE 23 n 23 ILE 23 B GLU 24 n 24 GLU 24 B ASN 25 n 25 ASN 25 B VAL 26 n 26 VAL 26 B LYS 27 n 27 LYS 27 B ALA 28 n 28 ALA 28 B LYS 29 n 29 LYS 29 B ILE 30 n 30 ILE 30 B GLN 31 n 31 GLN 31 B ASP 32 n 32 ASP 32 B LYS 33 n 33 LYS 33 B GLU 34 n 34 GLU 34 B GLY 35 n 35 GLY 35 B ILE 36 n 36 ILE 36 B PRO 37 n 37 PRO 37 B PRO 38 n 38 PRO 38 B ASP 39 n 39 ASP 39 B GLN 40 n 40 GLN 40 B GLN 41 n 41 GLN 41 B ARG 42 n 42 ARG 42 B LEU 43 n 43 LEU 43 B ILE 44 n 44 ILE 44 B PHE 45 n 45 PHE 45 B ALA 46 n 46 ALA 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B GLN 49 n 49 GLN 49 B LEU 50 n 50 LEU 50 B GLU 51 n 51 GLU 51 B ASP 52 n 52 ASP 52 B GLY 53 n 53 GLY 53 B ARG 54 n 54 ARG 54 B THR 55 n 55 THR 55 B LEU 56 n 56 LEU 56 B SER 57 n 57 SER 57 B ASP 58 n 58 ASP 58 B TYR 59 n 59 TYR 59 B ASN 60 n 60 ASN 60 B ILE 61 n 61 ILE 61 B GLN 62 n 62 GLN 62 B LYS 63 n 63 LYS 63 B GLU 64 n 64 GLU 64 B SER 65 n 65 SER 65 B THR 66 n 66 THR 66 B LEU 67 n 67 LEU 67 B HIS 68 n 68 HIS 68 B LEU 69 n 69 LEU 69 B VAL 70 n 70 VAL 70 B LEU 71 n 71 LEU 71 B ARG 72 n 72 ARG 72 B LEU 73 n 73 LEU 73 B n 74 74 B n 75 75 B n 76 76 B n 1 733 C n 2 734 C n 3 735 C n 4 736 C n 5 737 C n 6 738 C n 7 739 C n 8 740 C n 9 741 C n 10 742 C n 11 743 C n 12 744 C ASP 745 n 13 ASP 745 C GLN 746 n 14 GLN 746 C LYS 747 n 15 LYS 747 C GLU 748 n 16 GLU 748 C GLU 749 n 17 GLU 749 C GLU 750 n 18 GLU 750 C LEU 751 n 19 LEU 751 C LEU 752 n 20 LEU 752 C LEU 753 n 21 LEU 753 C PHE 754 n 22 PHE 754 C TRP 755 n 23 TRP 755 C THR 756 n 24 THR 756 C TYR 757 n 25 TYR 757 C ILE 758 n 26 ILE 758 C GLN 759 n 27 GLN 759 C ALA 760 n 28 ALA 760 C MET 761 n 29 MET 761 C LEU 762 n 30 LEU 762 C THR 763 n 31 THR 763 C ASN 764 n 32 ASN 764 C LEU 765 n 33 LEU 765 C GLU 766 n 34 GLU 766 C SER 767 n 35 SER 767 C LEU 768 n 36 LEU 768 C SER 769 n 37 SER 769 C LEU 770 n 38 LEU 770 C ASP 771 n 39 ASP 771 C ARG 772 n 40 ARG 772 C ILE 773 n 41 ILE 773 C TYR 774 n 42 TYR 774 C ASN 775 n 43 ASN 775 C MET 776 n 44 MET 776 C LEU 777 n 45 LEU 777 C ARG 778 n 46 ARG 778 C MET 779 n 47 MET 779 C PHE 780 n 48 PHE 780 C VAL 781 n 49 VAL 781 C VAL 782 n 50 VAL 782 C THR 783 n 51 THR 783 C GLY 784 n 52 GLY 784 C PRO 785 n 53 PRO 785 C ALA 786 n 54 ALA 786 C LEU 787 n 55 LEU 787 C ALA 788 n 56 ALA 788 C GLU 789 n 57 GLU 789 C ILE 790 n 58 ILE 790 C ASP 791 n 59 ASP 791 C LEU 792 n 60 LEU 792 C GLN 793 n 61 GLN 793 C GLU 794 n 62 GLU 794 C LEU 795 n 63 LEU 795 C GLN 796 n 64 GLN 796 C GLY 797 n 65 GLY 797 C TYR 798 n 66 TYR 798 C LEU 799 n 67 LEU 799 C GLN 800 n 68 GLN 800 C LYS 801 n 69 LYS 801 C LYS 802 n 70 LYS 802 C VAL 803 n 71 VAL 803 C ARG 804 n 72 ARG 804 C ASP 805 n 73 ASP 805 C GLN 806 n 74 GLN 806 C GLN 807 n 75 GLN 807 C LEU 808 n 76 LEU 808 C VAL 809 n 77 VAL 809 C TYR 810 n 78 TYR 810 C SER 811 n 79 SER 811 C ALA 812 n 80 ALA 812 C GLY 813 n 81 GLY 813 C VAL 814 n 82 VAL 814 C TYR 815 n 83 TYR 815 C ARG 816 n 84 ARG 816 C LEU 817 n 85 LEU 817 C PRO 818 n 86 PRO 818 C LYS 819 n 87 LYS 819 C ASN 820 n 88 ASN 820 C n 89 821 C n 90 822 C n 1 733 D n 2 734 D n 3 735 D n 4 736 D n 5 737 D n 6 738 D n 7 739 D n 8 740 D n 9 741 D n 10 742 D n 11 743 D n 12 744 D n 13 745 D GLN 746 n 14 GLN 746 D LYS 747 n 15 LYS 747 D GLU 748 n 16 GLU 748 D GLU 749 n 17 GLU 749 D GLU 750 n 18 GLU 750 D LEU 751 n 19 LEU 751 D LEU 752 n 20 LEU 752 D LEU 753 n 21 LEU 753 D PHE 754 n 22 PHE 754 D TRP 755 n 23 TRP 755 D THR 756 n 24 THR 756 D TYR 757 n 25 TYR 757 D ILE 758 n 26 ILE 758 D GLN 759 n 27 GLN 759 D ALA 760 n 28 ALA 760 D MET 761 n 29 MET 761 D LEU 762 n 30 LEU 762 D THR 763 n 31 THR 763 D ASN 764 n 32 ASN 764 D LEU 765 n 33 LEU 765 D GLU 766 n 34 GLU 766 D SER 767 n 35 SER 767 D LEU 768 n 36 LEU 768 D SER 769 n 37 SER 769 D LEU 770 n 38 LEU 770 D ASP 771 n 39 ASP 771 D ARG 772 n 40 ARG 772 D ILE 773 n 41 ILE 773 D TYR 774 n 42 TYR 774 D ASN 775 n 43 ASN 775 D MET 776 n 44 MET 776 D LEU 777 n 45 LEU 777 D ARG 778 n 46 ARG 778 D MET 779 n 47 MET 779 D PHE 780 n 48 PHE 780 D VAL 781 n 49 VAL 781 D VAL 782 n 50 VAL 782 D THR 783 n 51 THR 783 D GLY 784 n 52 GLY 784 D PRO 785 n 53 PRO 785 D ALA 786 n 54 ALA 786 D LEU 787 n 55 LEU 787 D ALA 788 n 56 ALA 788 D GLU 789 n 57 GLU 789 D ILE 790 n 58 ILE 790 D ASP 791 n 59 ASP 791 D LEU 792 n 60 LEU 792 D GLN 793 n 61 GLN 793 D GLU 794 n 62 GLU 794 D LEU 795 n 63 LEU 795 D GLN 796 n 64 GLN 796 D GLY 797 n 65 GLY 797 D TYR 798 n 66 TYR 798 D LEU 799 n 67 LEU 799 D GLN 800 n 68 GLN 800 D LYS 801 n 69 LYS 801 D LYS 802 n 70 LYS 802 D VAL 803 n 71 VAL 803 D ARG 804 n 72 ARG 804 D ASP 805 n 73 ASP 805 D GLN 806 n 74 GLN 806 D GLN 807 n 75 GLN 807 D LEU 808 n 76 LEU 808 D VAL 809 n 77 VAL 809 D TYR 810 n 78 TYR 810 D SER 811 n 79 SER 811 D ALA 812 n 80 ALA 812 D GLY 813 n 81 GLY 813 D VAL 814 n 82 VAL 814 D TYR 815 n 83 TYR 815 D ARG 816 n 84 ARG 816 D LEU 817 n 85 LEU 817 D PRO 818 n 86 PRO 818 D LYS 819 n 87 LYS 819 D n 88 820 D n 89 821 D n 90 822 D author_defined_assembly 2 dimeric author_defined_assembly 2 dimeric none 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 15 A O LEU 15 A N ILE 3 A N ILE 3 A N PHE 4 A N PHE 4 A O LEU 67 A O LEU 67 A O HIS 68 A O HIS 68 A N ILE 44 A N ILE 44 A N PHE 45 A N PHE 45 A O LYS 48 A O LYS 48 B O LEU 15 B O LEU 15 B N ILE 3 B N ILE 3 B N PHE 4 B N PHE 4 B O LEU 67 B O LEU 67 B O HIS 68 B O HIS 68 B N ILE 44 B N ILE 44 B N PHE 45 B N PHE 45 B O LYS 48 B O LYS 48 C N VAL 809 C N VAL 77 C O ARG 816 C O ARG 84 D N LEU 768 D N LEU 36 D O TYR 815 D O TYR 83 D O ARG 816 D O ARG 84 D N VAL 809 D N VAL 77 1 C CG ASP 745 C CG ASP 13 1 Y 1 C OD1 ASP 745 C OD1 ASP 13 1 Y 1 C OD2 ASP 745 C OD2 ASP 13 1 Y 1 C CG LYS 819 C CG LYS 87 1 Y 1 C CD LYS 819 C CD LYS 87 1 Y 1 C CE LYS 819 C CE LYS 87 1 Y 1 C NZ LYS 819 C NZ LYS 87 1 Y 1 D CG LYS 819 D CG LYS 87 1 Y 1 D CD LYS 819 D CD LYS 87 1 Y 1 D CE LYS 819 D CE LYS 87 1 Y 1 D NZ LYS 819 D NZ LYS 87 1 Y 1 A ARG 74 A ARG 74 1 Y 1 A GLY 75 A GLY 75 1 Y 1 A GLY 76 A GLY 76 1 Y 1 B ARG 74 B ARG 74 1 Y 1 B GLY 75 B GLY 75 1 Y 1 B GLY 76 B GLY 76 1 Y 1 C GLY 733 C GLY 1 1 Y 1 C SER 734 C SER 2 1 Y 1 C GLU 735 C GLU 3 1 Y 1 C SER 736 C SER 4 1 Y 1 C ASP 737 C ASP 5 1 Y 1 C SER 738 C SER 6 1 Y 1 C GLY 739 C GLY 7 1 Y 1 C MET 740 C MET 8 1 Y 1 C ALA 741 C ALA 9 1 Y 1 C SER 742 C SER 10 1 Y 1 C GLN 743 C GLN 11 1 Y 1 C ALA 744 C ALA 12 1 Y 1 C CYS 821 C CYS 89 1 Y 1 C SER 822 C SER 90 1 Y 1 D GLY 733 D GLY 1 1 Y 1 D SER 734 D SER 2 1 Y 1 D GLU 735 D GLU 3 1 Y 1 D SER 736 D SER 4 1 Y 1 D ASP 737 D ASP 5 1 Y 1 D SER 738 D SER 6 1 Y 1 D GLY 739 D GLY 7 1 Y 1 D MET 740 D MET 8 1 Y 1 D ALA 741 D ALA 9 1 Y 1 D SER 742 D SER 10 1 Y 1 D GLN 743 D GLN 11 1 Y 1 D ALA 744 D ALA 12 1 Y 1 D ASP 745 D ASP 13 1 Y 1 D ASN 820 D ASN 88 1 Y 1 D CYS 821 D CYS 89 1 Y 1 D SER 822 D SER 90 1 Y 1 A GLU 64 72.50 -2.88 1 C GLU 766 75.95 -46.36 1 D GLU 766 73.08 -59.19 48.829 -3.75 -0.00 -0.00 1.17 0.00 2.59 0.950 0.918 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.26620 0.22050 0.22287 2.20 53.55 980 17815 5.2 95.64 8.963 0.215 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.286 0.228 0.80 0.80 1.20 4s1z, 4YII chain A MAXIMUM LIKELIHOOD MASK 2.20 53.55 116 2511 0 0 2395 0.010 0.020 2436 0.002 0.020 2445 1.340 1.994 3289 0.898 3.000 5622 5.924 5.000 294 40.842 25.263 114 15.457 15.000 480 13.741 15.000 15 0.074 0.200 387 0.005 0.020 2690 0.001 0.020 521 2.708 4.590 1182 2.708 4.587 1181 3.998 6.869 1471 3.997 6.871 1472 3.757 5.134 1254 3.756 5.136 1255 6.109 7.496 1817 7.585 35.667 2688 7.561 35.547 2663 0.308 0.331 2.257 76 1335 20 98.67 2.20 53.55 6NXK 17815 -3 0.069 0.036 0.069 1 12 4.4 96.5 0.583 2.20 2.27 .303 0.583 1 4.4 99.0 refinement REFMAC 5.8.0135 data reduction XDS data scaling XDS phasing PHASER N Ubiquitin binding variants 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N A THR 22 A THR 22 HELX_P A GLY 35 A GLY 35 1 AA1 14 A PRO 37 A PRO 37 HELX_P A ASP 39 A ASP 39 5 AA2 3 A LEU 56 A LEU 56 HELX_P A ASN 60 A ASN 60 5 AA3 5 B THR 22 B THR 22 HELX_P B GLY 35 B GLY 35 1 AA4 14 B PRO 37 B PRO 37 HELX_P B ASP 39 B ASP 39 5 AA5 3 B LEU 56 B LEU 56 HELX_P B ASN 60 B ASN 60 5 AA6 5 C GLN 746 C GLN 14 HELX_P C GLU 766 C GLU 34 1 AA7 21 C SER 769 C SER 37 HELX_P C VAL 781 C VAL 49 1 AA8 13 C VAL 782 C VAL 50 HELX_P C THR 783 C THR 51 5 AA9 2 C GLY 784 C GLY 52 HELX_P C ALA 788 C ALA 56 5 AB1 5 C ASP 791 C ASP 59 HELX_P C ASP 805 C ASP 73 1 AB2 15 D LYS 747 D LYS 15 HELX_P D GLU 766 D GLU 34 1 AB3 20 D LEU 770 D LEU 38 HELX_P D GLY 784 D GLY 52 1 AB4 15 D PRO 785 D PRO 53 HELX_P D ALA 788 D ALA 56 5 AB5 4 D ASP 791 D ASP 59 HELX_P D ASP 805 D ASP 73 1 AB6 15 LIGASE APC, WHB, Ubiquitin, Diubiquitin, LIGASE UBC_HUMAN UNP 1 1 P0CG48 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ANC2_HUMAN UNP 2 735 Q9UJX6 ESDSGMASQADQKEEELLLFWTYIQAMLTNLESLSLDRIYNMLRMFVVTGPALAEIDLQELQGYLQKKVRDQQLVYSAGV YRLPKNCS 1 76 6NXK 1 76 P0CG48 A 1 1 76 1 76 6NXK 1 76 P0CG48 B 1 1 76 735 822 6NXK 735 822 Q9UJX6 C 2 3 90 735 822 6NXK 735 822 Q9UJX6 D 2 3 90 3 expression tag GLY 733 6NXK C Q9UJX6 UNP 1 3 expression tag SER 734 6NXK C Q9UJX6 UNP 2 4 expression tag GLY 733 6NXK D Q9UJX6 UNP 1 4 expression tag SER 734 6NXK D Q9UJX6 UNP 2 5 5 2 3 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 12 A THR 12 A GLU 16 A GLU 16 A GLN 2 A GLN 2 A LYS 6 A LYS 6 A THR 66 A THR 66 A LEU 71 A LEU 71 A GLN 41 A GLN 41 A PHE 45 A PHE 45 A LYS 48 A LYS 48 A GLN 49 A GLN 49 B THR 12 B THR 12 B GLU 16 B GLU 16 B GLN 2 B GLN 2 B THR 7 B THR 7 B THR 66 B THR 66 B LEU 71 B LEU 71 B GLN 41 B GLN 41 B PHE 45 B PHE 45 B LYS 48 B LYS 48 B GLN 49 B GLN 49 C VAL 809 C VAL 77 C SER 811 C SER 79 C VAL 814 C VAL 82 C ARG 816 C ARG 84 D LEU 768 D LEU 36 D SER 769 D SER 37 D VAL 814 D VAL 82 D ARG 816 D ARG 84 D VAL 809 D VAL 77 D SER 811 D SER 79 19 P 21 21 21