data_6O4J # _entry.id 6O4J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6O4J pdb_00006o4j 10.2210/pdb6o4j/pdb WWPDB D_1000239957 ? ? EMDB EMD-0619 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Amyloid Beta KLVFFAENVGS 16-26 D23N Iowa mutation' _pdbx_database_related.db_id EMD-0619 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6O4J _pdbx_database_status.recvd_initial_deposition_date 2019-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Griner, S.L.' 1 0000-0002-4500-2419 'Sawaya, M.R.' 2 0000-0003-0874-9043 'Rodriguez, J.A.' 3 0000-0001-8471-2504 'Cascio, D.' 4 0000-0002-3877-6803 'Gonen, T.' 5 0000-0002-9254-4069 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure based inhibitors of Amyloid Beta core suggest a common interface with Tau.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.46924 _citation.pdbx_database_id_PubMed 31612856 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Griner, S.L.' 1 ? primary 'Seidler, P.' 2 ? primary 'Bowler, J.' 3 ? primary 'Murray, K.A.' 4 ? primary 'Yang, T.P.' 5 0000-0002-4479-5154 primary 'Sahay, S.' 6 ? primary 'Sawaya, M.R.' 7 ? primary 'Cascio, D.' 8 ? primary 'Rodriguez, J.A.' 9 ? primary 'Philipp, S.' 10 ? primary 'Sosna, J.' 11 ? primary 'Glabe, C.G.' 12 ? primary 'Gonen, T.' 13 0000-0002-9254-4069 primary 'Eisenberg, D.S.' 14 0000-0003-2432-5419 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 114.180 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6O4J _cell.details ? _cell.formula_units_Z ? _cell.length_a 11.670 _cell.length_a_esd ? _cell.length_b 51.910 _cell.length_b_esd ? _cell.length_c 12.760 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Amyloid-beta precursor protein' _entity.formula_weight 1235.432 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation D23N _entity.pdbx_fragment 'UNP residues 687-697' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;APP, ABPP, APPI, Alzheimer disease amyloid protein, Amyloid precursor protein, Amyloid-beta A4 protein, Cerebral vascular amyloid peptide, CVAP, PreA4, Protease nexin-II, PN-II ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)KLVFFAENVGS(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XKLVFFAENVGSX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 LYS n 1 3 LEU n 1 4 VAL n 1 5 PHE n 1 6 PHE n 1 7 ALA n 1 8 GLU n 1 9 ASN n 1 10 VAL n 1 11 GLY n 1 12 SER n 1 13 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4_HUMAN _struct_ref.pdbx_db_accession P05067 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KLVFFAEDVGS _struct_ref.pdbx_align_begin 687 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6O4J A 2 ? 12 ? P05067 687 ? 697 ? 16 26 2 1 6O4J B 2 ? 12 ? P05067 687 ? 697 ? 16 26 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6O4J ACE A 1 ? UNP P05067 ? ? acetylation 15 1 1 6O4J ASN A 9 ? UNP P05067 ASP 694 'engineered mutation' 23 2 1 6O4J NH2 A 13 ? UNP P05067 ? ? amidation 27 3 2 6O4J ACE B 1 ? UNP P05067 ? ? acetylation 15 4 2 6O4J ASN B 9 ? UNP P05067 ASP 694 'engineered mutation' 23 5 2 6O4J NH2 B 13 ? UNP P05067 ? ? amidation 27 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6O4J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.43 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method UNSPECIFIED _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? # _diffrn.ambient_environment ? _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.area_resol_mean ? _diffrn_detector.details ? _diffrn_detector.detector ? _diffrn_detector.diffrn_id 1 _diffrn_detector.dtime ? _diffrn_detector.pdbx_collection_date 2014-11-07 _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_frequency ? _diffrn_detector.type ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type electron # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ELECTRON MICROSCOPE' _diffrn_source.take-off_angle ? _diffrn_source.target ? _diffrn_source.type ? _diffrn_source.voltage ? # _reflns.B_iso_Wilson_estimate 7.230 _reflns.entry_id 6O4J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.400 _reflns.d_resolution_low 11.640 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 2355 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 85.400 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.211 _reflns.pdbx_Rmerge_I_obs 0.240 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.060 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.886 _reflns.pdbx_scaling_rejects 15 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.246 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 47598 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.400 1.440 ? 2.880 ? 1966 209 ? 163 78.000 ? ? ? ? 0.652 ? ? ? ? ? ? ? ? 12.061 ? ? ? ? 0.682 ? ? 1 1 0.697 ? 1.440 1.480 ? 4.040 ? 2641 203 ? 169 83.300 ? ? ? ? 0.576 ? ? ? ? ? ? ? ? 15.627 ? ? ? ? 0.596 ? ? 2 1 0.671 ? 1.480 1.520 ? 4.870 ? 2499 169 ? 153 90.500 ? ? ? ? 0.489 ? ? ? ? ? ? ? ? 16.333 ? ? ? ? 0.503 ? ? 3 1 0.788 ? 1.520 1.570 ? 6.450 ? 3239 189 ? 164 86.800 ? ? ? ? 0.396 ? ? ? ? ? ? ? ? 19.750 ? ? ? ? 0.406 ? ? 4 1 0.923 ? 1.570 1.620 ? 6.490 ? 3893 194 ? 169 87.100 ? ? ? ? 0.471 ? ? ? ? ? ? ? ? 23.036 ? ? ? ? 0.481 ? ? 5 1 0.930 ? 1.620 1.680 ? 6.810 ? 3633 189 ? 154 81.500 ? ? ? ? 0.468 ? ? ? ? ? ? ? ? 23.591 ? ? ? ? 0.479 ? ? 6 1 0.882 ? 1.680 1.740 ? 6.840 ? 2443 144 ? 127 88.200 ? ? ? ? 0.394 ? ? ? ? ? ? ? ? 19.236 ? ? ? ? 0.404 ? ? 7 1 0.899 ? 1.740 1.810 ? 8.410 ? 3453 159 ? 143 89.900 ? ? ? ? 0.373 ? ? ? ? ? ? ? ? 24.147 ? ? ? ? 0.380 ? ? 8 1 0.956 ? 1.810 1.890 ? 8.900 ? 3144 170 ? 144 84.700 ? ? ? ? 0.325 ? ? ? ? ? ? ? ? 21.833 ? ? ? ? 0.332 ? ? 9 1 0.984 ? 1.890 1.980 ? 11.660 ? 2661 150 ? 125 83.300 ? ? ? ? 0.262 ? ? ? ? ? ? ? ? 21.288 ? ? ? ? 0.269 ? ? 10 1 0.987 ? 1.980 2.090 ? 11.430 ? 2581 135 ? 120 88.900 ? ? ? ? 0.277 ? ? ? ? ? ? ? ? 21.508 ? ? ? ? 0.284 ? ? 11 1 0.987 ? 2.090 2.220 ? 12.830 ? 2640 138 ? 120 87.000 ? ? ? ? 0.257 ? ? ? ? ? ? ? ? 22.000 ? ? ? ? 0.262 ? ? 12 1 0.977 ? 2.220 2.370 ? 11.670 ? 2309 129 ? 110 85.300 ? ? ? ? 0.269 ? ? ? ? ? ? ? ? 20.991 ? ? ? ? 0.276 ? ? 13 1 0.961 ? 2.370 2.560 ? 13.440 ? 2353 121 ? 104 86.000 ? ? ? ? 0.217 ? ? ? ? ? ? ? ? 22.625 ? ? ? ? 0.221 ? ? 14 1 0.993 ? 2.560 2.800 ? 12.620 ? 1772 102 ? 87 85.300 ? ? ? ? 0.217 ? ? ? ? ? ? ? ? 20.368 ? ? ? ? 0.223 ? ? 15 1 0.986 ? 2.800 3.130 ? 14.750 ? 1945 105 ? 86 81.900 ? ? ? ? 0.217 ? ? ? ? ? ? ? ? 22.616 ? ? ? ? 0.221 ? ? 16 1 0.983 ? 3.130 3.620 ? 15.480 ? 1451 75 ? 70 93.300 ? ? ? ? 0.179 ? ? ? ? ? ? ? ? 20.729 ? ? ? ? 0.183 ? ? 17 1 0.994 ? 3.620 4.430 ? 17.460 ? 1638 90 ? 73 81.100 ? ? ? ? 0.157 ? ? ? ? ? ? ? ? 22.438 ? ? ? ? 0.160 ? ? 18 1 0.995 ? 4.430 6.270 ? 16.610 ? 1004 57 ? 49 86.000 ? ? ? ? 0.163 ? ? ? ? ? ? ? ? 20.490 ? ? ? ? 0.167 ? ? 19 1 0.998 ? 6.270 11.640 ? 11.440 ? 333 29 ? 25 86.200 ? ? ? ? 0.298 ? ? ? ? ? ? ? ? 13.320 ? ? ? ? 0.308 ? ? 20 1 0.987 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 23.080 _refine.B_iso_mean 9.4646 _refine.B_iso_min 1.470 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6O4J _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4020 _refine.ls_d_res_low 11.6400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 2354 _refine.ls_number_reflns_R_free 236 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 86.1600 _refine.ls_percent_reflns_R_free 10.0300 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2419 _refine.ls_R_factor_R_free 0.2832 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2368 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.520 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 2Y2A' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.5100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine_hist.d_res_high 1.4020 _refine_hist.d_res_low 11.6400 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 178 _refine_hist.pdbx_number_residues_total 26 _refine_hist.pdbx_number_atoms_protein 178 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON CRYSTALLOGRAPHY' ? 0.014 ? 180 ? f_bond_d ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 1.458 ? 240 ? f_angle_d ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.067 ? 26 ? f_chiral_restr ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.006 ? 32 ? f_plane_restr ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 15.776 ? 60 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_weight 1 'ELECTRON CRYSTALLOGRAPHY' 1 1 TORSIONAL A 80 24.960 ? ? ? ? ? ? ? 2 'ELECTRON CRYSTALLOGRAPHY' 1 2 TORSIONAL B 80 24.960 ? ? ? ? ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'ELECTRON CRYSTALLOGRAPHY' 1.4017 1.7650 1153 . 115 1038 86.0000 . . . 0.3334 0.0000 0.2802 . . . . . . 2 . . . 'ELECTRON CRYSTALLOGRAPHY' 1.7650 11.6409 1201 . 121 1080 87.0000 . . . 0.2623 0.0000 0.2187 . . . . . . 2 . . . # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 'chain A' 1 2 'chain B' # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ACE 1 . A NH2 13 . A ACE 15 A NH2 27 ? 'chain A' 1 2 1 B ACE 1 . B NH2 13 . B ACE 15 B NH2 27 ? 'chain B' # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 6O4J _struct.title 'Amyloid Beta KLVFFAENVGS 16-26 D23N Iowa mutation' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6O4J _struct_keywords.text 'amyloid, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A LYS 2 N ? ? A ACE 15 A LYS 16 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A SER 12 C ? ? ? 1_555 A NH2 13 N ? ? A SER 26 A NH2 27 1_555 ? ? ? ? ? ? ? 1.234 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B LYS 2 N ? ? B ACE 15 B LYS 16 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? B SER 12 C ? ? ? 1_555 B NH2 13 N ? ? B SER 26 B NH2 27 1_555 ? ? ? ? ? ? ? 1.236 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 3 ? ALA A 7 ? LEU A 17 ALA A 21 AA1 2 LYS B 2 ? PHE B 6 ? LYS B 16 PHE B 20 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ALA _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 7 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 21 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LYS _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 2 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 16 # _atom_sites.entry_id 6O4J _atom_sites.fract_transf_matrix[1][1] 0.085690 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.038475 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019264 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.085907 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 C C . ACE A 1 1 ? 5.068 8.573 8.839 1.00 11.66 ? 15 ACE A C 1 HETATM 2 O O . ACE A 1 1 ? 6.002 8.093 9.466 1.00 14.02 ? 15 ACE A O 1 HETATM 3 C CH3 . ACE A 1 1 ? 5.313 9.279 7.510 1.00 7.84 ? 15 ACE A CH3 1 ATOM 4 N N . LYS A 1 2 ? 3.818 8.518 9.274 1.00 10.98 ? 16 LYS A N 1 ATOM 5 C CA . LYS A 1 2 ? 3.482 7.815 10.494 1.00 7.68 ? 16 LYS A CA 1 ATOM 6 C C . LYS A 1 2 ? 2.214 6.993 10.270 1.00 9.98 ? 16 LYS A C 1 ATOM 7 O O . LYS A 1 2 ? 1.262 7.449 9.627 1.00 4.40 ? 16 LYS A O 1 ATOM 8 C CB . LYS A 1 2 ? 3.306 8.799 11.645 1.00 8.36 ? 16 LYS A CB 1 ATOM 9 C CG . LYS A 1 2 ? 2.974 8.132 12.972 1.00 15.83 ? 16 LYS A CG 1 ATOM 10 C CD . LYS A 1 2 ? 2.923 9.135 14.107 1.00 18.85 ? 16 LYS A CD 1 ATOM 11 C CE . LYS A 1 2 ? 4.156 9.013 14.996 1.00 23.08 ? 16 LYS A CE 1 ATOM 12 N NZ . LYS A 1 2 ? 4.215 10.062 16.065 1.00 19.14 ? 16 LYS A NZ 1 ATOM 13 N N . LEU A 1 3 ? 2.210 5.784 10.810 1.00 4.64 ? 17 LEU A N 1 ATOM 14 C CA . LEU A 1 3 ? 1.125 4.840 10.601 1.00 3.70 ? 17 LEU A CA 1 ATOM 15 C C . LEU A 1 3 ? 0.928 4.023 11.865 1.00 2.41 ? 17 LEU A C 1 ATOM 16 O O . LEU A 1 3 ? 1.887 3.518 12.426 1.00 3.40 ? 17 LEU A O 1 ATOM 17 C CB . LEU A 1 3 ? 1.467 3.956 9.409 1.00 13.62 ? 17 LEU A CB 1 ATOM 18 C CG . LEU A 1 3 ? 0.801 2.637 9.064 1.00 18.81 ? 17 LEU A CG 1 ATOM 19 C CD1 . LEU A 1 3 ? 1.113 2.389 7.594 1.00 8.01 ? 17 LEU A CD1 1 ATOM 20 C CD2 . LEU A 1 3 ? 1.313 1.486 9.945 1.00 13.89 ? 17 LEU A CD2 1 ATOM 21 N N . VAL A 1 4 ? -0.306 3.894 12.323 1.00 3.99 ? 18 VAL A N 1 ATOM 22 C CA . VAL A 1 4 ? -0.555 3.098 13.512 1.00 5.10 ? 18 VAL A CA 1 ATOM 23 C C . VAL A 1 4 ? -1.771 2.209 13.254 1.00 2.35 ? 18 VAL A C 1 ATOM 24 O O . VAL A 1 4 ? -2.804 2.663 12.742 1.00 3.62 ? 18 VAL A O 1 ATOM 25 C CB . VAL A 1 4 ? -0.735 3.991 14.774 1.00 5.06 ? 18 VAL A CB 1 ATOM 26 C CG1 . VAL A 1 4 ? -1.884 4.940 14.612 1.00 11.37 ? 18 VAL A CG1 1 ATOM 27 C CG2 . VAL A 1 4 ? -0.902 3.140 16.052 1.00 9.76 ? 18 VAL A CG2 1 ATOM 28 N N . PHE A 1 5 ? -1.616 0.929 13.566 1.00 3.11 ? 19 PHE A N 1 ATOM 29 C CA . PHE A 1 5 ? -2.674 -0.051 13.419 1.00 2.04 ? 19 PHE A CA 1 ATOM 30 C C . PHE A 1 5 ? -2.909 -0.741 14.764 1.00 3.21 ? 19 PHE A C 1 ATOM 31 O O . PHE A 1 5 ? -1.957 -1.175 15.414 1.00 5.37 ? 19 PHE A O 1 ATOM 32 C CB . PHE A 1 5 ? -2.323 -1.075 12.344 1.00 4.26 ? 19 PHE A CB 1 ATOM 33 C CG . PHE A 1 5 ? -3.351 -2.157 12.206 1.00 4.12 ? 19 PHE A CG 1 ATOM 34 C CD1 . PHE A 1 5 ? -3.259 -3.319 12.969 1.00 7.14 ? 19 PHE A CD1 1 ATOM 35 C CD2 . PHE A 1 5 ? -4.430 -2.004 11.342 1.00 6.16 ? 19 PHE A CD2 1 ATOM 36 C CE1 . PHE A 1 5 ? -4.216 -4.314 12.869 1.00 8.95 ? 19 PHE A CE1 1 ATOM 37 C CE2 . PHE A 1 5 ? -5.394 -3.003 11.224 1.00 6.91 ? 19 PHE A CE2 1 ATOM 38 C CZ . PHE A 1 5 ? -5.281 -4.157 11.996 1.00 5.99 ? 19 PHE A CZ 1 ATOM 39 N N . PHE A 1 6 ? -4.156 -0.864 15.180 1.00 3.82 ? 20 PHE A N 1 ATOM 40 C CA . PHE A 1 6 ? -4.435 -1.577 16.407 1.00 3.93 ? 20 PHE A CA 1 ATOM 41 C C . PHE A 1 6 ? -5.710 -2.384 16.223 1.00 3.18 ? 20 PHE A C 1 ATOM 42 O O . PHE A 1 6 ? -6.707 -1.874 15.717 1.00 3.96 ? 20 PHE A O 1 ATOM 43 C CB . PHE A 1 6 ? -4.561 -0.604 17.573 1.00 4.62 ? 20 PHE A CB 1 ATOM 44 C CG . PHE A 1 6 ? -4.986 -1.245 18.845 1.00 3.75 ? 20 PHE A CG 1 ATOM 45 C CD1 . PHE A 1 6 ? -4.078 -1.962 19.608 1.00 6.88 ? 20 PHE A CD1 1 ATOM 46 C CD2 . PHE A 1 6 ? -6.301 -1.155 19.265 1.00 5.42 ? 20 PHE A CD2 1 ATOM 47 C CE1 . PHE A 1 6 ? -4.484 -2.569 20.785 1.00 5.77 ? 20 PHE A CE1 1 ATOM 48 C CE2 . PHE A 1 6 ? -6.706 -1.757 20.445 1.00 7.54 ? 20 PHE A CE2 1 ATOM 49 C CZ . PHE A 1 6 ? -5.799 -2.468 21.200 1.00 7.04 ? 20 PHE A CZ 1 ATOM 50 N N . ALA A 1 7 ? -5.673 -3.645 16.616 1.00 3.03 ? 21 ALA A N 1 ATOM 51 C CA . ALA A 1 7 ? -6.851 -4.499 16.535 1.00 5.04 ? 21 ALA A CA 1 ATOM 52 C C . ALA A 1 7 ? -6.976 -5.381 17.763 1.00 5.88 ? 21 ALA A C 1 ATOM 53 O O . ALA A 1 7 ? -5.984 -5.841 18.314 1.00 10.26 ? 21 ALA A O 1 ATOM 54 C CB . ALA A 1 7 ? -6.801 -5.350 15.284 1.00 6.14 ? 21 ALA A CB 1 ATOM 55 N N . GLU A 1 8 ? -8.202 -5.614 18.193 1.00 7.16 ? 22 GLU A N 1 ATOM 56 C CA . GLU A 1 8 ? -8.425 -6.444 19.353 1.00 9.27 ? 22 GLU A CA 1 ATOM 57 C C . GLU A 1 8 ? -9.743 -7.134 19.144 1.00 9.80 ? 22 GLU A C 1 ATOM 58 O O . GLU A 1 8 ? -10.672 -6.549 18.589 1.00 12.80 ? 22 GLU A O 1 ATOM 59 C CB . GLU A 1 8 ? -8.429 -5.610 20.636 1.00 10.73 ? 22 GLU A CB 1 ATOM 60 C CG . GLU A 1 8 ? -8.751 -6.398 21.910 1.00 17.00 ? 22 GLU A CG 1 ATOM 61 C CD . GLU A 1 8 ? -7.632 -7.338 22.341 1.00 13.63 ? 22 GLU A CD 1 ATOM 62 O OE1 . GLU A 1 8 ? -7.464 -8.389 21.685 1.00 16.48 ? 22 GLU A OE1 1 ATOM 63 O OE2 . GLU A 1 8 ? -6.947 -7.036 23.347 1.00 15.38 ? 22 GLU A OE2 1 ATOM 64 N N . ASN A 1 9 ? -9.830 -8.378 19.582 1.00 8.03 ? 23 ASN A N 1 ATOM 65 C CA . ASN A 1 9 ? -11.072 -9.106 19.480 1.00 8.51 ? 23 ASN A CA 1 ATOM 66 C C . ASN A 1 9 ? -11.435 -9.690 20.839 1.00 10.49 ? 23 ASN A C 1 ATOM 67 O O . ASN A 1 9 ? -10.877 -10.700 21.276 1.00 10.82 ? 23 ASN A O 1 ATOM 68 C CB . ASN A 1 9 ? -10.971 -10.188 18.404 1.00 8.26 ? 23 ASN A CB 1 ATOM 69 C CG . ASN A 1 9 ? -12.312 -10.799 18.068 1.00 9.50 ? 23 ASN A CG 1 ATOM 70 O OD1 . ASN A 1 9 ? -13.338 -10.442 18.659 1.00 8.57 ? 23 ASN A OD1 1 ATOM 71 N ND2 . ASN A 1 9 ? -12.319 -11.721 17.111 1.00 11.88 ? 23 ASN A ND2 1 ATOM 72 N N . VAL A 1 10 ? -12.353 -9.012 21.516 1.00 6.46 ? 24 VAL A N 1 ATOM 73 C CA . VAL A 1 10 ? -12.905 -9.514 22.761 1.00 9.79 ? 24 VAL A CA 1 ATOM 74 C C . VAL A 1 10 ? -14.404 -9.754 22.586 1.00 13.61 ? 24 VAL A C 1 ATOM 75 O O . VAL A 1 10 ? -15.160 -9.772 23.551 1.00 12.59 ? 24 VAL A O 1 ATOM 76 C CB . VAL A 1 10 ? -12.647 -8.548 23.938 1.00 11.87 ? 24 VAL A CB 1 ATOM 77 C CG1 . VAL A 1 10 ? -11.162 -8.430 24.197 1.00 12.13 ? 24 VAL A CG1 1 ATOM 78 C CG2 . VAL A 1 10 ? -13.260 -7.178 23.663 1.00 10.33 ? 24 VAL A CG2 1 ATOM 79 N N . GLY A 1 11 ? -14.818 -9.965 21.341 1.00 14.54 ? 25 GLY A N 1 ATOM 80 C CA . GLY A 1 11 ? -16.227 -10.096 21.007 1.00 13.19 ? 25 GLY A CA 1 ATOM 81 C C . GLY A 1 11 ? -16.959 -11.242 21.685 1.00 16.88 ? 25 GLY A C 1 ATOM 82 O O . GLY A 1 11 ? -16.377 -12.290 21.970 1.00 19.28 ? 25 GLY A O 1 ATOM 83 N N . SER A 1 12 ? -18.244 -11.031 21.949 1.00 21.76 ? 26 SER A N 1 ATOM 84 C CA . SER A 1 12 ? -19.120 -12.074 22.479 1.00 17.91 ? 26 SER A CA 1 ATOM 85 C C . SER A 1 12 ? -19.878 -12.736 21.325 1.00 20.56 ? 26 SER A C 1 ATOM 86 O O . SER A 1 12 ? -19.661 -12.397 20.159 1.00 22.78 ? 26 SER A O 1 ATOM 87 C CB . SER A 1 12 ? -20.102 -11.498 23.511 1.00 15.69 ? 26 SER A CB 1 ATOM 88 O OG . SER A 1 12 ? -19.441 -11.045 24.682 1.00 17.87 ? 26 SER A OG 1 HETATM 89 N N . NH2 A 1 13 ? -20.730 -13.609 21.514 1.00 20.59 ? 27 NH2 A N 1 HETATM 90 C C . ACE B 1 1 ? -3.077 -6.483 20.050 1.00 7.82 ? 15 ACE B C 1 HETATM 91 O O . ACE B 1 1 ? -1.910 -6.502 20.451 1.00 10.20 ? 15 ACE B O 1 HETATM 92 C CH3 . ACE B 1 1 ? -4.241 -6.415 21.025 1.00 10.15 ? 15 ACE B CH3 1 ATOM 93 N N . LYS B 1 2 ? -3.412 -6.558 18.769 1.00 9.91 ? 16 LYS B N 1 ATOM 94 C CA . LYS B 1 2 ? -2.422 -6.562 17.696 1.00 6.86 ? 16 LYS B CA 1 ATOM 95 C C . LYS B 1 2 ? -2.057 -5.120 17.380 1.00 7.88 ? 16 LYS B C 1 ATOM 96 O O . LYS B 1 2 ? -2.925 -4.341 16.995 1.00 6.00 ? 16 LYS B O 1 ATOM 97 C CB . LYS B 1 2 ? -2.986 -7.278 16.459 1.00 12.22 ? 16 LYS B CB 1 ATOM 98 C CG . LYS B 1 2 ? -2.045 -7.400 15.268 1.00 13.79 ? 16 LYS B CG 1 ATOM 99 C CD . LYS B 1 2 ? -0.837 -8.286 15.590 1.00 18.79 ? 16 LYS B CD 1 ATOM 100 C CE . LYS B 1 2 ? 0.175 -8.329 14.445 1.00 16.91 ? 16 LYS B CE 1 ATOM 101 N NZ . LYS B 1 2 ? -0.393 -8.976 13.226 1.00 15.90 ? 16 LYS B NZ 1 ATOM 102 N N . LEU B 1 3 ? -0.796 -4.752 17.566 1.00 5.61 ? 17 LEU B N 1 ATOM 103 C CA . LEU B 1 3 ? -0.364 -3.367 17.386 1.00 8.36 ? 17 LEU B CA 1 ATOM 104 C C . LEU B 1 3 ? 0.750 -3.324 16.358 1.00 6.06 ? 17 LEU B C 1 ATOM 105 O O . LEU B 1 3 ? 1.711 -4.086 16.454 1.00 7.71 ? 17 LEU B O 1 ATOM 106 C CB . LEU B 1 3 ? 0.104 -2.771 18.722 1.00 8.31 ? 17 LEU B CB 1 ATOM 107 C CG . LEU B 1 3 ? 0.434 -1.278 18.886 1.00 9.54 ? 17 LEU B CG 1 ATOM 108 C CD1 . LEU B 1 3 ? 1.805 -0.909 18.357 1.00 10.25 ? 17 LEU B CD1 1 ATOM 109 C CD2 . LEU B 1 3 ? -0.630 -0.363 18.303 1.00 13.04 ? 17 LEU B CD2 1 ATOM 110 N N . VAL B 1 4 ? 0.624 -2.476 15.346 1.00 3.57 ? 18 VAL B N 1 ATOM 111 C CA . VAL B 1 4 ? 1.733 -2.274 14.413 1.00 5.97 ? 18 VAL B CA 1 ATOM 112 C C . VAL B 1 4 ? 1.945 -0.785 14.211 1.00 3.96 ? 18 VAL B C 1 ATOM 113 O O . VAL B 1 4 ? 1.007 -0.070 13.866 1.00 3.93 ? 18 VAL B O 1 ATOM 114 C CB . VAL B 1 4 ? 1.497 -2.935 13.047 1.00 3.69 ? 18 VAL B CB 1 ATOM 115 C CG1 . VAL B 1 4 ? 2.736 -2.759 12.155 1.00 7.07 ? 18 VAL B CG1 1 ATOM 116 C CG2 . VAL B 1 4 ? 1.146 -4.406 13.220 1.00 6.54 ? 18 VAL B CG2 1 ATOM 117 N N . PHE B 1 5 ? 3.178 -0.333 14.406 1.00 1.53 ? 19 PHE B N 1 ATOM 118 C CA . PHE B 1 5 ? 3.501 1.077 14.331 1.00 3.09 ? 19 PHE B CA 1 ATOM 119 C C . PHE B 1 5 ? 4.687 1.264 13.402 1.00 3.02 ? 19 PHE B C 1 ATOM 120 O O . PHE B 1 5 ? 5.638 0.500 13.460 1.00 3.28 ? 19 PHE B O 1 ATOM 121 C CB . PHE B 1 5 ? 3.818 1.652 15.714 1.00 3.59 ? 19 PHE B CB 1 ATOM 122 C CG . PHE B 1 5 ? 4.327 3.062 15.658 1.00 2.34 ? 19 PHE B CG 1 ATOM 123 C CD1 . PHE B 1 5 ? 3.461 4.102 15.382 1.00 5.98 ? 19 PHE B CD1 1 ATOM 124 C CD2 . PHE B 1 5 ? 5.678 3.341 15.818 1.00 2.66 ? 19 PHE B CD2 1 ATOM 125 C CE1 . PHE B 1 5 ? 3.918 5.409 15.295 1.00 11.66 ? 19 PHE B CE1 1 ATOM 126 C CE2 . PHE B 1 5 ? 6.143 4.653 15.730 1.00 14.30 ? 19 PHE B CE2 1 ATOM 127 C CZ . PHE B 1 5 ? 5.257 5.684 15.467 1.00 8.41 ? 19 PHE B CZ 1 ATOM 128 N N . PHE B 1 6 ? 4.623 2.279 12.552 1.00 1.47 ? 20 PHE B N 1 ATOM 129 C CA . PHE B 1 6 ? 5.746 2.586 11.693 1.00 2.33 ? 20 PHE B CA 1 ATOM 130 C C . PHE B 1 6 ? 5.857 4.077 11.506 1.00 3.15 ? 20 PHE B C 1 ATOM 131 O O . PHE B 1 6 ? 4.882 4.733 11.208 1.00 1.60 ? 20 PHE B O 1 ATOM 132 C CB . PHE B 1 6 ? 5.600 1.906 10.343 1.00 2.11 ? 20 PHE B CB 1 ATOM 133 C CG . PHE B 1 6 ? 6.722 2.196 9.409 1.00 4.50 ? 20 PHE B CG 1 ATOM 134 C CD1 . PHE B 1 6 ? 8.002 1.768 9.706 1.00 6.06 ? 20 PHE B CD1 1 ATOM 135 C CD2 . PHE B 1 6 ? 6.500 2.893 8.234 1.00 4.46 ? 20 PHE B CD2 1 ATOM 136 C CE1 . PHE B 1 6 ? 9.063 2.025 8.843 1.00 6.27 ? 20 PHE B CE1 1 ATOM 137 C CE2 . PHE B 1 6 ? 7.561 3.147 7.352 1.00 7.36 ? 20 PHE B CE2 1 ATOM 138 C CZ . PHE B 1 6 ? 8.845 2.724 7.673 1.00 7.66 ? 20 PHE B CZ 1 ATOM 139 N N . ALA B 1 7 ? 7.056 4.615 11.654 1.00 4.55 ? 21 ALA B N 1 ATOM 140 C CA . ALA B 1 7 ? 7.250 6.040 11.463 1.00 5.66 ? 21 ALA B CA 1 ATOM 141 C C . ALA B 1 7 ? 8.528 6.229 10.688 1.00 4.68 ? 21 ALA B C 1 ATOM 142 O O . ALA B 1 7 ? 9.483 5.477 10.872 1.00 4.01 ? 21 ALA B O 1 ATOM 143 C CB . ALA B 1 7 ? 7.302 6.761 12.776 1.00 7.91 ? 21 ALA B CB 1 ATOM 144 N N . GLU B 1 8 ? 8.533 7.213 9.809 1.00 7.09 ? 22 GLU B N 1 ATOM 145 C CA . GLU B 1 8 ? 9.704 7.441 8.992 1.00 6.88 ? 22 GLU B CA 1 ATOM 146 C C . GLU B 1 8 ? 9.841 8.895 8.632 1.00 6.38 ? 22 GLU B C 1 ATOM 147 O O . GLU B 1 8 ? 8.873 9.583 8.363 1.00 7.24 ? 22 GLU B O 1 ATOM 148 C CB . GLU B 1 8 ? 9.664 6.581 7.732 1.00 8.81 ? 22 GLU B CB 1 ATOM 149 C CG . GLU B 1 8 ? 8.634 6.969 6.691 1.00 13.32 ? 22 GLU B CG 1 ATOM 150 C CD . GLU B 1 8 ? 7.241 6.453 6.994 1.00 19.51 ? 22 GLU B CD 1 ATOM 151 O OE1 . GLU B 1 8 ? 7.006 5.976 8.127 1.00 15.63 ? 22 GLU B OE1 1 ATOM 152 O OE2 . GLU B 1 8 ? 6.376 6.492 6.086 1.00 18.69 ? 22 GLU B OE2 1 ATOM 153 N N . ASN B 1 9 ? 11.076 9.361 8.632 1.00 7.92 ? 23 ASN B N 1 ATOM 154 C CA . ASN B 1 9 ? 11.380 10.715 8.240 1.00 9.99 ? 23 ASN B CA 1 ATOM 155 C C . ASN B 1 9 ? 12.642 10.647 7.435 1.00 8.18 ? 23 ASN B C 1 ATOM 156 O O . ASN B 1 9 ? 13.746 10.714 7.981 1.00 10.65 ? 23 ASN B O 1 ATOM 157 C CB . ASN B 1 9 ? 11.552 11.621 9.455 1.00 12.81 ? 23 ASN B CB 1 ATOM 158 C CG . ASN B 1 9 ? 11.630 13.085 9.079 1.00 11.29 ? 23 ASN B CG 1 ATOM 159 O OD1 . ASN B 1 9 ? 11.844 13.426 7.920 1.00 17.38 ? 23 ASN B OD1 1 ATOM 160 N ND2 . ASN B 1 9 ? 11.452 13.963 10.066 1.00 18.43 ? 23 ASN B ND2 1 ATOM 161 N N . VAL B 1 10 ? 12.480 10.469 6.138 1.00 7.61 ? 24 VAL B N 1 ATOM 162 C CA . VAL B 1 10 ? 13.615 10.328 5.256 1.00 10.28 ? 24 VAL B CA 1 ATOM 163 C C . VAL B 1 10 ? 13.377 11.200 4.038 1.00 12.38 ? 24 VAL B C 1 ATOM 164 O O . VAL B 1 10 ? 12.333 11.123 3.383 1.00 13.94 ? 24 VAL B O 1 ATOM 165 C CB . VAL B 1 10 ? 13.857 8.851 4.867 1.00 13.95 ? 24 VAL B CB 1 ATOM 166 C CG1 . VAL B 1 10 ? 12.604 8.220 4.376 1.00 19.94 ? 24 VAL B CG1 1 ATOM 167 C CG2 . VAL B 1 10 ? 14.951 8.741 3.822 1.00 12.65 ? 24 VAL B CG2 1 ATOM 168 N N . GLY B 1 11 ? 14.340 12.073 3.767 1.00 14.05 ? 25 GLY B N 1 ATOM 169 C CA . GLY B 1 11 ? 14.241 12.969 2.632 1.00 16.06 ? 25 GLY B CA 1 ATOM 170 C C . GLY B 1 11 ? 14.195 12.183 1.342 1.00 12.15 ? 25 GLY B C 1 ATOM 171 O O . GLY B 1 11 ? 14.955 11.228 1.160 1.00 15.11 ? 25 GLY B O 1 ATOM 172 N N . SER B 1 12 ? 13.306 12.577 0.443 1.00 11.80 ? 26 SER B N 1 ATOM 173 C CA . SER B 1 12 ? 13.203 11.869 -0.815 1.00 10.53 ? 26 SER B CA 1 ATOM 174 C C . SER B 1 12 ? 12.994 12.828 -1.982 1.00 13.00 ? 26 SER B C 1 ATOM 175 O O . SER B 1 12 ? 12.520 13.948 -1.811 1.00 17.67 ? 26 SER B O 1 ATOM 176 C CB . SER B 1 12 ? 12.080 10.835 -0.740 1.00 10.99 ? 26 SER B CB 1 ATOM 177 O OG . SER B 1 12 ? 10.931 11.382 -0.124 1.00 14.76 ? 26 SER B OG 1 HETATM 178 N N . NH2 B 1 13 ? 13.315 12.503 -3.131 1.00 12.73 ? 27 NH2 B N 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 15 15 ACE ACE A . n A 1 2 LYS 2 16 16 LYS LYS A . n A 1 3 LEU 3 17 17 LEU LEU A . n A 1 4 VAL 4 18 18 VAL VAL A . n A 1 5 PHE 5 19 19 PHE PHE A . n A 1 6 PHE 6 20 20 PHE PHE A . n A 1 7 ALA 7 21 21 ALA ALA A . n A 1 8 GLU 8 22 22 GLU GLU A . n A 1 9 ASN 9 23 23 ASN ASN A . n A 1 10 VAL 10 24 24 VAL VAL A . n A 1 11 GLY 11 25 25 GLY GLY A . n A 1 12 SER 12 26 26 SER SER A . n A 1 13 NH2 13 27 27 NH2 NH2 A . n B 1 1 ACE 1 15 15 ACE ACE B . n B 1 2 LYS 2 16 16 LYS LYS B . n B 1 3 LEU 3 17 17 LEU LEU B . n B 1 4 VAL 4 18 18 VAL VAL B . n B 1 5 PHE 5 19 19 PHE PHE B . n B 1 6 PHE 6 20 20 PHE PHE B . n B 1 7 ALA 7 21 21 ALA ALA B . n B 1 8 GLU 8 22 22 GLU GLU B . n B 1 9 ASN 9 23 23 ASN ASN B . n B 1 10 VAL 10 24 24 VAL VAL B . n B 1 11 GLY 11 25 25 GLY GLY B . n B 1 12 SER 12 26 26 SER SER B . n B 1 13 NH2 13 27 27 NH2 NH2 B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 1 2 A,B 1 3 A,B 1 4 A,B 1 5 A,B 1 6 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -11.6700000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 11.6700000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 -5.2265549370 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 11.6404778033 5 'crystal symmetry operation' 1_456 x-1,y,z+1 1.0000000000 0.0000000000 0.0000000000 -16.8965549370 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 11.6404778033 6 'crystal symmetry operation' 1_656 x+1,y,z+1 1.0000000000 0.0000000000 0.0000000000 6.4434450630 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 11.6404778033 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-10-30 2 'Structure model' 1 1 2019-12-18 3 'Structure model' 1 2 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' em_3d_fitting_list 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_em_3d_fitting_list.accession_code' 5 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 6 3 'Structure model' '_em_3d_fitting_list.source_name' 7 3 'Structure model' '_em_3d_fitting_list.type' 8 3 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 9 3 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 10 3 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 11 3 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 12 3 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 13 3 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 14 3 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 15 3 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1 ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 2 ? refinement ? ? 'Paul D. Adams' PDAdams@lbl.gov ? ? ? ? C++ http://www.phenix-online.org/ ? PHENIX ? ? package . 3 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _em_3d_fitting.entry_id 6O4J _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.target_criteria 'Maximum likelihood' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 2Y2A _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 2Y2A # _em_3d_reconstruction.entry_id 6O4J _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution 1.402 _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.symmetry_type '3D CRYSTAL' _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Fibrils of Amyloid Beta segment 16-26' _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6O4J _em_image_scans.id 1 _em_image_scans.dimension_height 2048 _em_image_scans.dimension_width 2048 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6O4J _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.citation_id ? _em_sample_support.details unspecified _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.id 1 _em_sample_support.method ? _em_sample_support.specimen_id 1 # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 6O4J _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6O4J _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ASN N N N N 21 ASN CA C N S 22 ASN C C N N 23 ASN O O N N 24 ASN CB C N N 25 ASN CG C N N 26 ASN OD1 O N N 27 ASN ND2 N N N 28 ASN OXT O N N 29 ASN H H N N 30 ASN H2 H N N 31 ASN HA H N N 32 ASN HB2 H N N 33 ASN HB3 H N N 34 ASN HD21 H N N 35 ASN HD22 H N N 36 ASN HXT H N N 37 ASP N N N N 38 ASP CA C N S 39 ASP C C N N 40 ASP O O N N 41 ASP CB C N N 42 ASP CG C N N 43 ASP OD1 O N N 44 ASP OD2 O N N 45 ASP OXT O N N 46 ASP H H N N 47 ASP H2 H N N 48 ASP HA H N N 49 ASP HB2 H N N 50 ASP HB3 H N N 51 ASP HD2 H N N 52 ASP HXT H N N 53 GLU N N N N 54 GLU CA C N S 55 GLU C C N N 56 GLU O O N N 57 GLU CB C N N 58 GLU CG C N N 59 GLU CD C N N 60 GLU OE1 O N N 61 GLU OE2 O N N 62 GLU OXT O N N 63 GLU H H N N 64 GLU H2 H N N 65 GLU HA H N N 66 GLU HB2 H N N 67 GLU HB3 H N N 68 GLU HG2 H N N 69 GLU HG3 H N N 70 GLU HE2 H N N 71 GLU HXT H N N 72 GLY N N N N 73 GLY CA C N N 74 GLY C C N N 75 GLY O O N N 76 GLY OXT O N N 77 GLY H H N N 78 GLY H2 H N N 79 GLY HA2 H N N 80 GLY HA3 H N N 81 GLY HXT H N N 82 LEU N N N N 83 LEU CA C N S 84 LEU C C N N 85 LEU O O N N 86 LEU CB C N N 87 LEU CG C N N 88 LEU CD1 C N N 89 LEU CD2 C N N 90 LEU OXT O N N 91 LEU H H N N 92 LEU H2 H N N 93 LEU HA H N N 94 LEU HB2 H N N 95 LEU HB3 H N N 96 LEU HG H N N 97 LEU HD11 H N N 98 LEU HD12 H N N 99 LEU HD13 H N N 100 LEU HD21 H N N 101 LEU HD22 H N N 102 LEU HD23 H N N 103 LEU HXT H N N 104 LYS N N N N 105 LYS CA C N S 106 LYS C C N N 107 LYS O O N N 108 LYS CB C N N 109 LYS CG C N N 110 LYS CD C N N 111 LYS CE C N N 112 LYS NZ N N N 113 LYS OXT O N N 114 LYS H H N N 115 LYS H2 H N N 116 LYS HA H N N 117 LYS HB2 H N N 118 LYS HB3 H N N 119 LYS HG2 H N N 120 LYS HG3 H N N 121 LYS HD2 H N N 122 LYS HD3 H N N 123 LYS HE2 H N N 124 LYS HE3 H N N 125 LYS HZ1 H N N 126 LYS HZ2 H N N 127 LYS HZ3 H N N 128 LYS HXT H N N 129 NH2 N N N N 130 NH2 HN1 H N N 131 NH2 HN2 H N N 132 PHE N N N N 133 PHE CA C N S 134 PHE C C N N 135 PHE O O N N 136 PHE CB C N N 137 PHE CG C Y N 138 PHE CD1 C Y N 139 PHE CD2 C Y N 140 PHE CE1 C Y N 141 PHE CE2 C Y N 142 PHE CZ C Y N 143 PHE OXT O N N 144 PHE H H N N 145 PHE H2 H N N 146 PHE HA H N N 147 PHE HB2 H N N 148 PHE HB3 H N N 149 PHE HD1 H N N 150 PHE HD2 H N N 151 PHE HE1 H N N 152 PHE HE2 H N N 153 PHE HZ H N N 154 PHE HXT H N N 155 SER N N N N 156 SER CA C N S 157 SER C C N N 158 SER O O N N 159 SER CB C N N 160 SER OG O N N 161 SER OXT O N N 162 SER H H N N 163 SER H2 H N N 164 SER HA H N N 165 SER HB2 H N N 166 SER HB3 H N N 167 SER HG H N N 168 SER HXT H N N 169 VAL N N N N 170 VAL CA C N S 171 VAL C C N N 172 VAL O O N N 173 VAL CB C N N 174 VAL CG1 C N N 175 VAL CG2 C N N 176 VAL OXT O N N 177 VAL H H N N 178 VAL H2 H N N 179 VAL HA H N N 180 VAL HB H N N 181 VAL HG11 H N N 182 VAL HG12 H N N 183 VAL HG13 H N N 184 VAL HG21 H N N 185 VAL HG22 H N N 186 VAL HG23 H N N 187 VAL HXT H N N 188 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ASN N CA sing N N 19 ASN N H sing N N 20 ASN N H2 sing N N 21 ASN CA C sing N N 22 ASN CA CB sing N N 23 ASN CA HA sing N N 24 ASN C O doub N N 25 ASN C OXT sing N N 26 ASN CB CG sing N N 27 ASN CB HB2 sing N N 28 ASN CB HB3 sing N N 29 ASN CG OD1 doub N N 30 ASN CG ND2 sing N N 31 ASN ND2 HD21 sing N N 32 ASN ND2 HD22 sing N N 33 ASN OXT HXT sing N N 34 ASP N CA sing N N 35 ASP N H sing N N 36 ASP N H2 sing N N 37 ASP CA C sing N N 38 ASP CA CB sing N N 39 ASP CA HA sing N N 40 ASP C O doub N N 41 ASP C OXT sing N N 42 ASP CB CG sing N N 43 ASP CB HB2 sing N N 44 ASP CB HB3 sing N N 45 ASP CG OD1 doub N N 46 ASP CG OD2 sing N N 47 ASP OD2 HD2 sing N N 48 ASP OXT HXT sing N N 49 GLU N CA sing N N 50 GLU N H sing N N 51 GLU N H2 sing N N 52 GLU CA C sing N N 53 GLU CA CB sing N N 54 GLU CA HA sing N N 55 GLU C O doub N N 56 GLU C OXT sing N N 57 GLU CB CG sing N N 58 GLU CB HB2 sing N N 59 GLU CB HB3 sing N N 60 GLU CG CD sing N N 61 GLU CG HG2 sing N N 62 GLU CG HG3 sing N N 63 GLU CD OE1 doub N N 64 GLU CD OE2 sing N N 65 GLU OE2 HE2 sing N N 66 GLU OXT HXT sing N N 67 GLY N CA sing N N 68 GLY N H sing N N 69 GLY N H2 sing N N 70 GLY CA C sing N N 71 GLY CA HA2 sing N N 72 GLY CA HA3 sing N N 73 GLY C O doub N N 74 GLY C OXT sing N N 75 GLY OXT HXT sing N N 76 LEU N CA sing N N 77 LEU N H sing N N 78 LEU N H2 sing N N 79 LEU CA C sing N N 80 LEU CA CB sing N N 81 LEU CA HA sing N N 82 LEU C O doub N N 83 LEU C OXT sing N N 84 LEU CB CG sing N N 85 LEU CB HB2 sing N N 86 LEU CB HB3 sing N N 87 LEU CG CD1 sing N N 88 LEU CG CD2 sing N N 89 LEU CG HG sing N N 90 LEU CD1 HD11 sing N N 91 LEU CD1 HD12 sing N N 92 LEU CD1 HD13 sing N N 93 LEU CD2 HD21 sing N N 94 LEU CD2 HD22 sing N N 95 LEU CD2 HD23 sing N N 96 LEU OXT HXT sing N N 97 LYS N CA sing N N 98 LYS N H sing N N 99 LYS N H2 sing N N 100 LYS CA C sing N N 101 LYS CA CB sing N N 102 LYS CA HA sing N N 103 LYS C O doub N N 104 LYS C OXT sing N N 105 LYS CB CG sing N N 106 LYS CB HB2 sing N N 107 LYS CB HB3 sing N N 108 LYS CG CD sing N N 109 LYS CG HG2 sing N N 110 LYS CG HG3 sing N N 111 LYS CD CE sing N N 112 LYS CD HD2 sing N N 113 LYS CD HD3 sing N N 114 LYS CE NZ sing N N 115 LYS CE HE2 sing N N 116 LYS CE HE3 sing N N 117 LYS NZ HZ1 sing N N 118 LYS NZ HZ2 sing N N 119 LYS NZ HZ3 sing N N 120 LYS OXT HXT sing N N 121 NH2 N HN1 sing N N 122 NH2 N HN2 sing N N 123 PHE N CA sing N N 124 PHE N H sing N N 125 PHE N H2 sing N N 126 PHE CA C sing N N 127 PHE CA CB sing N N 128 PHE CA HA sing N N 129 PHE C O doub N N 130 PHE C OXT sing N N 131 PHE CB CG sing N N 132 PHE CB HB2 sing N N 133 PHE CB HB3 sing N N 134 PHE CG CD1 doub Y N 135 PHE CG CD2 sing Y N 136 PHE CD1 CE1 sing Y N 137 PHE CD1 HD1 sing N N 138 PHE CD2 CE2 doub Y N 139 PHE CD2 HD2 sing N N 140 PHE CE1 CZ doub Y N 141 PHE CE1 HE1 sing N N 142 PHE CE2 CZ sing Y N 143 PHE CE2 HE2 sing N N 144 PHE CZ HZ sing N N 145 PHE OXT HXT sing N N 146 SER N CA sing N N 147 SER N H sing N N 148 SER N H2 sing N N 149 SER CA C sing N N 150 SER CA CB sing N N 151 SER CA HA sing N N 152 SER C O doub N N 153 SER C OXT sing N N 154 SER CB OG sing N N 155 SER CB HB2 sing N N 156 SER CB HB3 sing N N 157 SER OG HG sing N N 158 SER OXT HXT sing N N 159 VAL N CA sing N N 160 VAL N H sing N N 161 VAL N H2 sing N N 162 VAL CA C sing N N 163 VAL CA CB sing N N 164 VAL CA HA sing N N 165 VAL C O doub N N 166 VAL C OXT sing N N 167 VAL CB CG1 sing N N 168 VAL CB CG2 sing N N 169 VAL CB HB sing N N 170 VAL CG1 HG11 sing N N 171 VAL CG1 HG12 sing N N 172 VAL CG1 HG13 sing N N 173 VAL CG2 HG21 sing N N 174 VAL CG2 HG22 sing N N 175 VAL CG2 HG23 sing N N 176 VAL OXT HXT sing N N 177 # _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.angle_alpha 90 _em_3d_crystal_entity.angle_beta 114.18 _em_3d_crystal_entity.angle_gamma 90 _em_3d_crystal_entity.length_a 11.67 _em_3d_crystal_entity.length_b 51.91 _em_3d_crystal_entity.length_c 12.76 _em_3d_crystal_entity.space_group_name p21 _em_3d_crystal_entity.space_group_num 4 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 200 mM MgCl2 'magnesium formate' 1 2 10 % C2H6OS DMSO 1 3 100 mM C4H11NO3 'Tris Base' 1 4 15 % C3H8O isopropanol # _em_crystal_formation.id 1 _em_crystal_formation.specimen_id 1 _em_crystal_formation.atmosphere air _em_crystal_formation.details ? _em_crystal_formation.instrument 'microcentrifuge tube' _em_crystal_formation.lipid_mixture ? _em_crystal_formation.lipid_protein_ratio ? _em_crystal_formation.temperature 310 _em_crystal_formation.time 4 _em_crystal_formation.time_unit DAY # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_diffraction.id 1 _em_diffraction.camera_length 1840 _em_diffraction.imaging_id 1 _em_diffraction.tilt_angle_list ? # _em_diffraction_shell.id 1 _em_diffraction_shell.em_diffraction_stats_id 1 _em_diffraction_shell.fourier_space_coverage 78.0 _em_diffraction_shell.high_resolution 1.40 _em_diffraction_shell.low_resolution 1.44 _em_diffraction_shell.multiplicity 12.1 _em_diffraction_shell.num_structure_factors 163 _em_diffraction_shell.phase_residual 0.01 # _em_diffraction_stats.id 1 _em_diffraction_stats.details ? _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.fourier_space_coverage 85.4 _em_diffraction_stats.high_resolution 1.40 _em_diffraction_stats.num_intensities_measured 47598 _em_diffraction_stats.num_structure_factors 2355 _em_diffraction_stats.overall_phase_error 0 _em_diffraction_stats.overall_phase_residual 0.01 _em_diffraction_stats.phase_error_rejection_criteria 0 _em_diffraction_stats.r_merge 0.240 _em_diffraction_stats.r_sym 0.240 # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 0.03 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)' _em_image_recording.num_diffraction_images 1331 _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'IMAGE ACQUISITION' ? ? ? ? ? 1 2 MASKING ? ? ? ? ? ? 3 'CTF CORRECTION' ? ? ? 1 ? ? 4 'LAYERLINE INDEXING' ? ? ? ? ? ? 5 'DIFFRACTION INDEXING' ? ? ? ? ? ? 6 'MODEL FITTING' ? Coot ? ? 1 ? 7 OTHER ? ? ? ? ? ? 8 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ? 9 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ? 10 'SYMMETRY DETERMINATION' ? ? ? 1 ? ? 11 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? ? 12 RECONSTRUCTION ? ? ? 1 ? ? 13 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 7.5 _em_specimen.details nanocrystals _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'R01 AG029430' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2Y2A _pdbx_initial_refinement_model.details 'PDB entry 2Y2A' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #