0.027312
0.006072
0.007299
0.000000
0.023495
0.004313
0.000000
0.000000
0.023914
0.00000
0.00000
0.00000
Horton, J.R.
Cheng, X.
Yang, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
97.17
102.56
102.53
36.614
43.602
43.557
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
N
C
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
Y
90
N
C
N
91
N
N
Y
92
N
N
Y
93
N
C
Y
94
N
N
Y
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
N
C
N
121
R
C
N
122
N
N
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
C
N
150
R
C
N
151
N
O
N
152
S
C
N
153
N
O
N
154
N
C
N
155
R
C
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
C
N
164
N
N
N
165
N
N
Y
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
C
N
187
R
C
N
188
N
O
N
189
S
C
N
190
N
O
N
191
N
C
N
192
R
C
N
193
N
N
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
O
N
235
N
N
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
O
N
255
N
O
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
N
C
N
268
N
C
N
269
N
O
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
Y
281
N
C
Y
282
N
N
Y
283
N
C
Y
284
N
C
Y
285
N
N
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
S
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
N
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
S
N
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
N
N
390
S
C
N
391
N
C
N
392
N
O
N
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
N
417
N
C
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
N
434
N
O
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
R
C
N
448
N
O
N
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
N
N
461
S
C
N
462
N
C
N
463
N
O
N
464
N
C
N
465
N
C
N
466
N
C
N
467
N
O
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
Y
285
N
sing
Y
286
N
doub
Y
287
N
doub
N
288
N
sing
Y
289
N
sing
N
290
N
sing
Y
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
sing
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
doub
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
1362-4962
47
8375
8387
10.1093/nar/gkz381
31081034
Structural basis for preferential binding of human TCF4 to DNA containing 5-carboxylcytosine.
2019
10.2210/pdb6od4/pdb
pdb_00006od4
100
1
N
PIXEL
2018-08-16
DECTRIS EIGER X 16M
double crystal Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.00000
1.0
22-ID
APS
1.00000
SYNCHROTRON
APS BEAMLINE 22-ID
7401.737
Transcription factor 4
C-terminal bHLH domain (UNP residues 405-464)
4
man
polymer
3348.209
DNA (5'-D(*TP*AP*CP*AP*CP*GP*TP*GP*TP*A)-3')
2
syn
polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
18.015
water
40
nat
water
TCF-4, Class B basic helix-loop-helix protein 19, bHLHb19, Immunoglobulin transcription factor 2, ITF-2, SL3-3 enhancer factor 2, SEF-2
no
no
HMRRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRER
HMRRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRER
A,B,G,H
polypeptide(L)
no
no
(DT)(DT)(DA)(DC)(DA)(DC)(DG)(DT)(DG)(DT)(DA)
TTACACGTGTA
X,W
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
62
TCF4, BHLHB19, ITF2, SEF2
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21-Codon Plus(DE3)-RIL
Biological sequence
1
1.80
31.48
VAPOR DIFFUSION, SITTING DROP
5.6
20% PEG4000, 10% 2-propanol, 0.1 M sodium citrate tribasic dihydrate, pH 5.6
292
17.714
1
20
X
2
W
11
-4.296
X_DT2:DA11_W
1
-18.106
-0.042
-0.121
-0.620
5.385
1
20
X
3
W
10
-1.063
X_DA3:DT10_W
2
-6.523
0.230
0.360
-0.185
7.575
1
19
X
4
W
9
-0.346
X_DC4:DG9_W
3
-6.889
0.431
0.157
-0.220
-3.425
1
20
X
5
W
8
1.689
X_DA5:DT8_W
4
-11.811
-0.154
-0.003
-0.191
-2.605
1
19
X
6
W
7
-0.144
X_DC6:DG7_W
5
-16.915
-0.023
0.177
-0.168
6.038
1
19
X
7
W
6
1.505
X_DG7:DC6_W
6
-15.571
0.007
0.175
-0.174
5.779
1
20
X
8
W
5
2.240
X_DT8:DA5_W
7
-12.482
0.171
-0.036
-0.168
-5.108
1
19
X
9
W
4
-0.034
X_DG9:DC4_W
8
-5.598
-0.477
0.071
-0.203
-5.131
1
20
X
10
W
3
-0.239
X_DT10:DA3_W
9
-6.362
-0.060
0.289
-0.174
3.945
38.522
X
X
2
3
-5.052
W
W
11
10
3.964
-3.322
1.575
1.890
XX_DT2DA3:DT10DA11_WW
1
4.503
-6.847
38.129
3.365
-1.710
3.226
32.955
X
X
3
4
2.927
W
W
10
9
3.287
1.659
0.340
-0.990
XX_DA3DC4:DG9DT10_WW
2
-0.784
1.383
32.905
-2.027
-0.732
3.709
41.109
X
X
4
5
-3.924
W
W
9
8
3.732
-2.751
0.161
0.266
XX_DC4DA5:DT8DG9_WW
3
3.155
-4.500
40.904
0.719
0.160
3.257
33.316
X
X
5
6
3.907
W
W
8
7
3.225
2.234
-0.654
-0.210
XX_DA5DC6:DG7DT8_WW
4
-3.737
6.535
33.039
-0.737
0.522
3.548
35.889
X
X
6
7
19.211
W
W
7
6
3.422
11.637
0.057
0.950
XX_DC6DG7:DC6DG7_WW
5
0.628
-1.037
34.003
-0.284
0.006
3.305
33.099
X
X
7
8
3.613
W
W
6
5
3.275
2.052
0.589
-0.189
XX_DG7DT8:DA5DC6_WW
6
4.186
-7.372
32.778
-0.681
-0.321
3.708
40.282
X
X
8
9
-1.834
W
W
5
4
3.717
-1.261
-0.158
0.286
XX_DT8DG9:DC4DA5_WW
7
-3.124
4.541
40.147
0.577
-0.173
3.310
34.163
X
X
9
10
2.580
W
W
4
3
3.358
1.515
-0.273
-0.949
XX_DG9DT10:DA3DC4_WW
8
0.448
-0.762
34.128
-1.860
0.536
citation
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Author supporting evidence
Data collection
Database references
Refinement description
1
0
2019-05-29
1
1
2019-10-30
1
2
2020-01-01
1
3
2023-10-11
_citation.journal_volume
_citation.page_first
_citation.page_last
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM049245-23
N
RCSB
Y
RCSB
2019-03-25
REL
REL
EDO
1,2-ETHANEDIOL
HOH
water
9606
Human
Homo sapiens
sample
1
11
2QL2
PDB entry 2QL2
PDB
experimental model
EDO
201
3
EDO
EDO
201
W
HOH
33
4
HOH
HOH
701
A
HOH
12
4
HOH
HOH
702
A
HOH
34
4
HOH
HOH
703
A
HOH
11
4
HOH
HOH
704
A
HOH
24
4
HOH
HOH
705
A
HOH
48
4
HOH
HOH
706
A
HOH
42
4
HOH
HOH
707
A
HOH
14
4
HOH
HOH
708
A
HOH
38
4
HOH
HOH
709
A
HOH
29
4
HOH
HOH
710
A
HOH
28
4
HOH
HOH
711
A
HOH
7
4
HOH
HOH
701
B
HOH
30
4
HOH
HOH
702
B
HOH
16
4
HOH
HOH
703
B
HOH
4
4
HOH
HOH
704
B
HOH
17
4
HOH
HOH
705
B
HOH
43
4
HOH
HOH
706
B
HOH
1
4
HOH
HOH
707
B
HOH
46
4
HOH
HOH
708
B
HOH
2
4
HOH
HOH
701
G
HOH
15
4
HOH
HOH
702
G
HOH
44
4
HOH
HOH
703
G
HOH
47
4
HOH
HOH
701
H
HOH
8
4
HOH
HOH
702
H
HOH
9
4
HOH
HOH
101
X
HOH
41
4
HOH
HOH
102
X
HOH
23
4
HOH
HOH
103
X
HOH
27
4
HOH
HOH
104
X
HOH
5
4
HOH
HOH
105
X
HOH
19
4
HOH
HOH
106
X
HOH
36
4
HOH
HOH
107
X
HOH
40
4
HOH
HOH
108
X
HOH
35
4
HOH
HOH
109
X
HOH
22
4
HOH
HOH
301
W
HOH
21
4
HOH
HOH
302
W
HOH
6
4
HOH
HOH
303
W
HOH
26
4
HOH
HOH
304
W
HOH
20
4
HOH
HOH
305
W
HOH
39
4
HOH
HOH
306
W
HOH
18
4
HOH
HOH
307
W
HIS
567
n
1
HIS
567
A
MET
568
n
2
MET
568
A
ARG
569
n
3
ARG
569
A
ARG
570
n
4
ARG
570
A
MET
571
n
5
MET
571
A
ALA
572
n
6
ALA
572
A
ASN
573
n
7
ASN
573
A
ASN
574
n
8
ASN
574
A
ALA
575
n
9
ALA
575
A
ARG
576
n
10
ARG
576
A
GLU
577
n
11
GLU
577
A
ARG
578
n
12
ARG
578
A
LEU
579
n
13
LEU
579
A
ARG
580
n
14
ARG
580
A
VAL
581
n
15
VAL
581
A
ARG
582
n
16
ARG
582
A
ASP
583
n
17
ASP
583
A
ILE
584
n
18
ILE
584
A
ASN
585
n
19
ASN
585
A
GLU
586
n
20
GLU
586
A
ALA
587
n
21
ALA
587
A
PHE
588
n
22
PHE
588
A
LYS
589
n
23
LYS
589
A
GLU
590
n
24
GLU
590
A
LEU
591
n
25
LEU
591
A
GLY
592
n
26
GLY
592
A
ARG
593
n
27
ARG
593
A
MET
594
n
28
MET
594
A
VAL
595
n
29
VAL
595
A
GLN
596
n
30
GLN
596
A
LEU
597
n
31
LEU
597
A
HIS
598
n
32
HIS
598
A
LEU
599
n
33
LEU
599
A
LYS
600
n
34
LYS
600
A
SER
601
n
35
SER
601
A
ASP
602
n
36
ASP
602
A
LYS
603
n
37
LYS
603
A
PRO
604
n
38
PRO
604
A
GLN
605
n
39
GLN
605
A
THR
606
n
40
THR
606
A
LYS
607
n
41
LYS
607
A
LEU
608
n
42
LEU
608
A
LEU
609
n
43
LEU
609
A
ILE
610
n
44
ILE
610
A
LEU
611
n
45
LEU
611
A
HIS
612
n
46
HIS
612
A
GLN
613
n
47
GLN
613
A
ALA
614
n
48
ALA
614
A
VAL
615
n
49
VAL
615
A
ALA
616
n
50
ALA
616
A
VAL
617
n
51
VAL
617
A
ILE
618
n
52
ILE
618
A
LEU
619
n
53
LEU
619
A
SER
620
n
54
SER
620
A
LEU
621
n
55
LEU
621
A
GLU
622
n
56
GLU
622
A
GLN
623
n
57
GLN
623
A
GLN
624
n
58
GLN
624
A
VAL
625
n
59
VAL
625
A
ARG
626
n
60
ARG
626
A
GLU
627
n
61
GLU
627
A
n
62
628
A
HIS
567
n
1
HIS
567
B
MET
568
n
2
MET
568
B
ARG
569
n
3
ARG
569
B
ARG
570
n
4
ARG
570
B
MET
571
n
5
MET
571
B
ALA
572
n
6
ALA
572
B
ASN
573
n
7
ASN
573
B
ASN
574
n
8
ASN
574
B
ALA
575
n
9
ALA
575
B
ARG
576
n
10
ARG
576
B
GLU
577
n
11
GLU
577
B
ARG
578
n
12
ARG
578
B
LEU
579
n
13
LEU
579
B
ARG
580
n
14
ARG
580
B
VAL
581
n
15
VAL
581
B
ARG
582
n
16
ARG
582
B
ASP
583
n
17
ASP
583
B
ILE
584
n
18
ILE
584
B
ASN
585
n
19
ASN
585
B
GLU
586
n
20
GLU
586
B
ALA
587
n
21
ALA
587
B
PHE
588
n
22
PHE
588
B
LYS
589
n
23
LYS
589
B
GLU
590
n
24
GLU
590
B
LEU
591
n
25
LEU
591
B
GLY
592
n
26
GLY
592
B
ARG
593
n
27
ARG
593
B
MET
594
n
28
MET
594
B
VAL
595
n
29
VAL
595
B
GLN
596
n
30
GLN
596
B
LEU
597
n
31
LEU
597
B
HIS
598
n
32
HIS
598
B
LEU
599
n
33
LEU
599
B
LYS
600
n
34
LYS
600
B
SER
601
n
35
SER
601
B
ASP
602
n
36
ASP
602
B
LYS
603
n
37
LYS
603
B
PRO
604
n
38
PRO
604
B
GLN
605
n
39
GLN
605
B
THR
606
n
40
THR
606
B
LYS
607
n
41
LYS
607
B
LEU
608
n
42
LEU
608
B
LEU
609
n
43
LEU
609
B
ILE
610
n
44
ILE
610
B
LEU
611
n
45
LEU
611
B
HIS
612
n
46
HIS
612
B
GLN
613
n
47
GLN
613
B
ALA
614
n
48
ALA
614
B
VAL
615
n
49
VAL
615
B
ALA
616
n
50
ALA
616
B
VAL
617
n
51
VAL
617
B
ILE
618
n
52
ILE
618
B
LEU
619
n
53
LEU
619
B
SER
620
n
54
SER
620
B
LEU
621
n
55
LEU
621
B
GLU
622
n
56
GLU
622
B
GLN
623
n
57
GLN
623
B
GLN
624
n
58
GLN
624
B
VAL
625
n
59
VAL
625
B
ARG
626
n
60
ARG
626
B
GLU
627
n
61
GLU
627
B
n
62
628
B
n
1
567
G
n
2
568
G
n
3
569
G
n
4
570
G
n
5
571
G
n
6
572
G
ASN
573
n
7
ASN
573
G
ASN
574
n
8
ASN
574
G
ALA
575
n
9
ALA
575
G
ARG
576
n
10
ARG
576
G
GLU
577
n
11
GLU
577
G
ARG
578
n
12
ARG
578
G
LEU
579
n
13
LEU
579
G
ARG
580
n
14
ARG
580
G
VAL
581
n
15
VAL
581
G
ARG
582
n
16
ARG
582
G
ASP
583
n
17
ASP
583
G
ILE
584
n
18
ILE
584
G
ASN
585
n
19
ASN
585
G
GLU
586
n
20
GLU
586
G
ALA
587
n
21
ALA
587
G
PHE
588
n
22
PHE
588
G
LYS
589
n
23
LYS
589
G
GLU
590
n
24
GLU
590
G
LEU
591
n
25
LEU
591
G
GLY
592
n
26
GLY
592
G
ARG
593
n
27
ARG
593
G
MET
594
n
28
MET
594
G
VAL
595
n
29
VAL
595
G
GLN
596
n
30
GLN
596
G
LEU
597
n
31
LEU
597
G
HIS
598
n
32
HIS
598
G
LEU
599
n
33
LEU
599
G
n
34
600
G
n
35
601
G
n
36
602
G
LYS
603
n
37
LYS
603
G
PRO
604
n
38
PRO
604
G
GLN
605
n
39
GLN
605
G
THR
606
n
40
THR
606
G
LYS
607
n
41
LYS
607
G
LEU
608
n
42
LEU
608
G
LEU
609
n
43
LEU
609
G
ILE
610
n
44
ILE
610
G
LEU
611
n
45
LEU
611
G
HIS
612
n
46
HIS
612
G
GLN
613
n
47
GLN
613
G
ALA
614
n
48
ALA
614
G
VAL
615
n
49
VAL
615
G
ALA
616
n
50
ALA
616
G
VAL
617
n
51
VAL
617
G
ILE
618
n
52
ILE
618
G
LEU
619
n
53
LEU
619
G
SER
620
n
54
SER
620
G
LEU
621
n
55
LEU
621
G
GLU
622
n
56
GLU
622
G
GLN
623
n
57
GLN
623
G
GLN
624
n
58
GLN
624
G
VAL
625
n
59
VAL
625
G
ARG
626
n
60
ARG
626
G
GLU
627
n
61
GLU
627
G
ARG
628
n
62
ARG
628
G
n
1
567
H
n
2
568
H
n
3
569
H
n
4
570
H
n
5
571
H
n
6
572
H
n
7
573
H
ASN
574
n
8
ASN
574
H
ALA
575
n
9
ALA
575
H
ARG
576
n
10
ARG
576
H
GLU
577
n
11
GLU
577
H
ARG
578
n
12
ARG
578
H
LEU
579
n
13
LEU
579
H
ARG
580
n
14
ARG
580
H
VAL
581
n
15
VAL
581
H
ARG
582
n
16
ARG
582
H
ASP
583
n
17
ASP
583
H
ILE
584
n
18
ILE
584
H
ASN
585
n
19
ASN
585
H
GLU
586
n
20
GLU
586
H
ALA
587
n
21
ALA
587
H
PHE
588
n
22
PHE
588
H
LYS
589
n
23
LYS
589
H
GLU
590
n
24
GLU
590
H
LEU
591
n
25
LEU
591
H
GLY
592
n
26
GLY
592
H
ARG
593
n
27
ARG
593
H
MET
594
n
28
MET
594
H
VAL
595
n
29
VAL
595
H
GLN
596
n
30
GLN
596
H
LEU
597
n
31
LEU
597
H
HIS
598
n
32
HIS
598
H
LEU
599
n
33
LEU
599
H
LYS
600
n
34
LYS
600
H
n
35
601
H
n
36
602
H
LYS
603
n
37
LYS
603
H
PRO
604
n
38
PRO
604
H
GLN
605
n
39
GLN
605
H
THR
606
n
40
THR
606
H
LYS
607
n
41
LYS
607
H
LEU
608
n
42
LEU
608
H
LEU
609
n
43
LEU
609
H
ILE
610
n
44
ILE
610
H
LEU
611
n
45
LEU
611
H
HIS
612
n
46
HIS
612
H
GLN
613
n
47
GLN
613
H
ALA
614
n
48
ALA
614
H
VAL
615
n
49
VAL
615
H
ALA
616
n
50
ALA
616
H
VAL
617
n
51
VAL
617
H
ILE
618
n
52
ILE
618
H
LEU
619
n
53
LEU
619
H
SER
620
n
54
SER
620
H
LEU
621
n
55
LEU
621
H
GLU
622
n
56
GLU
622
H
GLN
623
n
57
GLN
623
H
GLN
624
n
58
GLN
624
H
VAL
625
n
59
VAL
625
H
ARG
626
n
60
ARG
626
H
GLU
627
n
61
GLU
627
H
ARG
628
n
62
ARG
628
H
n
1
1
X
DT
2
n
2
DT
2
X
DA
3
n
3
DA
3
X
DC
4
n
4
DC
4
X
DA
5
n
5
DA
5
X
DC
6
n
6
DC
6
X
DG
7
n
7
DG
7
X
DT
8
n
8
DT
8
X
DG
9
n
9
DG
9
X
DT
10
n
10
DT
10
X
DA
11
n
11
DA
11
X
n
1
1
W
DT
2
n
2
DT
2
W
DA
3
n
3
DA
3
W
DC
4
n
4
DC
4
W
DA
5
n
5
DA
5
W
DC
6
n
6
DC
6
W
DG
7
n
7
DG
7
W
DT
8
n
8
DT
8
W
DG
9
n
9
DG
9
W
DT
10
n
10
DT
10
W
DA
11
n
11
DA
11
W
2.8787
0.5844
0.3541
2.9365
-1.0942
1.9189
-0.1412
0.1356
-0.4061
-0.3596
0.0375
-0.9621
0.4790
-0.0076
0.1733
0.4190
0.0898
0.0898
0.3001
-0.0289
0.3489
refined
-4.0017
-18.2139
-29.6092
X-RAY DIFFRACTION
0.3576
0.4040
-1.6000
1.2502
-1.9710
6.5972
0.5413
-0.5804
-0.0871
1.2575
-0.4340
-1.0172
-1.0172
2.0407
-0.0027
0.6240
-0.1920
-0.1628
0.5975
0.0205
0.5613
refined
0.3699
1.9671
-25.8731
X-RAY DIFFRACTION
6.0235
-0.5990
1.7001
4.0628
-4.0547
5.1324
-0.1712
0.2447
0.7404
0.4146
0.2548
0.0602
-0.5987
-0.3035
-0.0223
0.2387
0.0308
0.0144
0.2206
-0.0288
0.3054
refined
-9.3931
4.8367
-32.8804
X-RAY DIFFRACTION
3.3584
-0.9305
1.4332
5.5819
-4.4906
3.4163
-0.2303
-0.3551
0.2493
0.6836
0.2325
-0.0576
-0.3604
-0.8275
-0.2122
0.3762
0.0469
0.1044
0.2937
-0.0344
0.2640
refined
-13.6580
-9.0011
-19.1070
X-RAY DIFFRACTION
4.9239
-3.8621
3.9484
2.9813
-2.5362
4.5971
0.5338
-0.0864
-0.5605
-1.0236
-0.4248
1.1854
1.2771
-0.7356
-0.8015
0.6037
-0.1709
-0.0219
0.4670
-0.0829
0.5121
refined
-17.8013
-9.3099
-39.3653
X-RAY DIFFRACTION
5.5672
0.0809
0.3056
3.4594
-3.1870
7.8872
-0.0703
0.7386
0.4173
-0.4185
-0.2210
-0.4982
0.1653
0.1349
0.2830
0.1657
0.0210
0.0439
0.3041
0.0162
0.2084
refined
-8.0193
-1.8111
-40.8811
X-RAY DIFFRACTION
5.7241
0.5129
-0.7241
7.6260
-5.1492
3.8146
0.1328
0.5540
-0.2452
-1.0719
0.2598
0.5034
0.6180
-0.9161
-0.2588
0.4520
-0.0202
-0.1172
0.2732
-0.0139
0.3830
refined
-5.7842
9.9224
-15.9990
X-RAY DIFFRACTION
8.5773
-0.3616
0.6519
3.4137
-3.0447
9.6937
-0.1185
-0.9933
-0.0944
0.2147
0.2424
0.3055
-0.1738
-0.5990
-0.1100
0.1906
-0.0421
-0.0108
0.3869
-0.0394
0.2814
refined
-1.2050
7.0132
1.1786
X-RAY DIFFRACTION
4.4233
0.2077
-0.4187
1.8509
-2.0353
6.1446
0.2734
-0.5516
0.2498
0.3508
-0.2791
-0.8553
-1.0847
0.3419
-0.1795
0.4247
-0.0743
0.0053
0.4560
0.0250
0.2526
refined
6.1599
16.5144
-6.8916
X-RAY DIFFRACTION
0.8022
-0.3738
0.5569
5.6590
-7.9337
2.0114
-0.0575
0.7296
-0.6318
-0.6876
-1.5397
-1.6595
0.5548
1.2969
1.3829
0.5644
0.0679
0.0600
0.7658
0.0593
0.6707
refined
9.0029
2.9221
-12.7134
X-RAY DIFFRACTION
8.1793
2.1656
-2.4954
3.6953
-2.0305
4.1247
-0.1143
-0.1490
-1.2873
-0.1675
-0.0054
-0.3067
0.4971
0.0108
0.0646
0.2342
-0.0166
-0.0428
0.3261
-0.0068
0.4129
refined
-0.4011
-1.1960
-5.7223
X-RAY DIFFRACTION
3.3822
3.4200
2.0645
8.7178
0.9233
9.7538
-0.0559
0.0401
-1.0391
-0.0612
0.3504
-0.7791
0.1410
0.1248
-0.2645
0.5308
0.0261
0.0709
0.2550
-0.0152
0.3452
refined
-8.9924
-20.9911
-18.2185
X-RAY DIFFRACTION
3.2401
1.1348
1.4558
8.0207
1.1387
9.9140
-0.2461
-0.7252
-0.2995
0.2595
0.1261
-0.1663
-0.1027
-0.8049
0.1139
0.4999
0.0853
0.0192
0.3076
0.0393
0.2232
refined
-8.4295
-20.8414
-18.4520
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 567 through 597 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 598 through 606 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 607 through 627 )
X-RAY DIFFRACTION
4
chain 'B' and (resid 567 through 597 )
X-RAY DIFFRACTION
5
chain 'B' and (resid 598 through 606 )
X-RAY DIFFRACTION
6
chain 'B' and (resid 607 through 627 )
X-RAY DIFFRACTION
7
chain 'G' and (resid 573 through 597 )
X-RAY DIFFRACTION
8
chain 'G' and (resid 598 through 628 )
X-RAY DIFFRACTION
9
chain 'H' and (resid 574 through 597 )
X-RAY DIFFRACTION
10
chain 'H' and (resid 598 through 606 )
X-RAY DIFFRACTION
11
chain 'H' and (resid 607 through 628 )
X-RAY DIFFRACTION
12
chain 'X' and (resid 2 through 11 )
X-RAY DIFFRACTION
13
chain 'W' and (resid 2 through 11 )
author_and_software_defined_assembly
PISA
4
tetrameric
author_and_software_defined_assembly
PISA
2
dimeric
isothermal titration calorimetry
gel filtration
5040
-44
10390
1980
-27
7430
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
HIS
567
A
CG
HIS
1
1
Y
1
A
ND1
HIS
567
A
ND1
HIS
1
1
Y
1
A
CD2
HIS
567
A
CD2
HIS
1
1
Y
1
A
CE1
HIS
567
A
CE1
HIS
1
1
Y
1
A
NE2
HIS
567
A
NE2
HIS
1
1
Y
1
A
CG
ARG
576
A
CG
ARG
10
1
Y
1
A
CD
ARG
576
A
CD
ARG
10
1
Y
1
A
NE
ARG
576
A
NE
ARG
10
1
Y
1
A
CZ
ARG
576
A
CZ
ARG
10
1
Y
1
A
NH1
ARG
576
A
NH1
ARG
10
1
Y
1
A
NH2
ARG
576
A
NH2
ARG
10
1
Y
1
A
CG
LEU
579
A
CG
LEU
13
1
Y
1
A
CD1
LEU
579
A
CD1
LEU
13
1
Y
1
A
CD2
LEU
579
A
CD2
LEU
13
1
Y
1
A
CG
ARG
582
A
CG
ARG
16
1
Y
1
A
CD
ARG
582
A
CD
ARG
16
1
Y
1
A
NE
ARG
582
A
NE
ARG
16
1
Y
1
A
CZ
ARG
582
A
CZ
ARG
16
1
Y
1
A
NH1
ARG
582
A
NH1
ARG
16
1
Y
1
A
NH2
ARG
582
A
NH2
ARG
16
1
Y
1
A
CG
LYS
600
A
CG
LYS
34
1
Y
1
A
CD
LYS
600
A
CD
LYS
34
1
Y
1
A
CE
LYS
600
A
CE
LYS
34
1
Y
1
A
NZ
LYS
600
A
NZ
LYS
34
1
Y
1
A
OG
SER
601
A
OG
SER
35
1
Y
1
A
CG
ASP
602
A
CG
ASP
36
1
Y
1
A
OD1
ASP
602
A
OD1
ASP
36
1
Y
1
A
OD2
ASP
602
A
OD2
ASP
36
1
Y
1
A
CG
LYS
603
A
CG
LYS
37
1
Y
1
A
CD
LYS
603
A
CD
LYS
37
1
Y
1
A
CE
LYS
603
A
CE
LYS
37
1
Y
1
A
NZ
LYS
603
A
NZ
LYS
37
1
Y
1
B
CG
HIS
567
B
CG
HIS
1
1
Y
1
B
ND1
HIS
567
B
ND1
HIS
1
1
Y
1
B
CD2
HIS
567
B
CD2
HIS
1
1
Y
1
B
CE1
HIS
567
B
CE1
HIS
1
1
Y
1
B
NE2
HIS
567
B
NE2
HIS
1
1
Y
1
B
CG
ARG
569
B
CG
ARG
3
1
Y
1
B
CD
ARG
569
B
CD
ARG
3
1
Y
1
B
NE
ARG
569
B
NE
ARG
3
1
Y
1
B
CZ
ARG
569
B
CZ
ARG
3
1
Y
1
B
NH1
ARG
569
B
NH1
ARG
3
1
Y
1
B
NH2
ARG
569
B
NH2
ARG
3
1
Y
1
B
CG
ARG
576
B
CG
ARG
10
1
Y
1
B
CD
ARG
576
B
CD
ARG
10
1
Y
1
B
NE
ARG
576
B
NE
ARG
10
1
Y
1
B
CZ
ARG
576
B
CZ
ARG
10
1
Y
1
B
NH1
ARG
576
B
NH1
ARG
10
1
Y
1
B
NH2
ARG
576
B
NH2
ARG
10
1
Y
1
B
CG
GLU
586
B
CG
GLU
20
1
Y
1
B
CD
GLU
586
B
CD
GLU
20
1
Y
1
B
OE1
GLU
586
B
OE1
GLU
20
1
Y
1
B
OE2
GLU
586
B
OE2
GLU
20
1
Y
1
B
CG
LYS
600
B
CG
LYS
34
1
Y
1
B
CD
LYS
600
B
CD
LYS
34
1
Y
1
B
CE
LYS
600
B
CE
LYS
34
1
Y
1
B
NZ
LYS
600
B
NZ
LYS
34
1
Y
1
B
OG
SER
601
B
OG
SER
35
1
Y
1
B
CG
ASP
602
B
CG
ASP
36
1
Y
1
B
OD1
ASP
602
B
OD1
ASP
36
1
Y
1
B
OD2
ASP
602
B
OD2
ASP
36
1
Y
1
B
CG
LYS
603
B
CG
LYS
37
1
Y
1
B
CD
LYS
603
B
CD
LYS
37
1
Y
1
B
CE
LYS
603
B
CE
LYS
37
1
Y
1
B
NZ
LYS
603
B
NZ
LYS
37
1
Y
1
G
CG
ASN
573
C
CG
ASN
7
1
Y
1
G
OD1
ASN
573
C
OD1
ASN
7
1
Y
1
G
ND2
ASN
573
C
ND2
ASN
7
1
Y
1
G
CG
ASN
574
C
CG
ASN
8
1
Y
1
G
OD1
ASN
574
C
OD1
ASN
8
1
Y
1
G
ND2
ASN
574
C
ND2
ASN
8
1
Y
1
G
CG
GLU
577
C
CG
GLU
11
1
Y
1
G
CD
GLU
577
C
CD
GLU
11
1
Y
1
G
OE1
GLU
577
C
OE1
GLU
11
1
Y
1
G
OE2
GLU
577
C
OE2
GLU
11
1
Y
1
G
CG
ARG
582
C
CG
ARG
16
1
Y
1
G
CD
ARG
582
C
CD
ARG
16
1
Y
1
G
NE
ARG
582
C
NE
ARG
16
1
Y
1
G
CZ
ARG
582
C
CZ
ARG
16
1
Y
1
G
NH1
ARG
582
C
NH1
ARG
16
1
Y
1
G
NH2
ARG
582
C
NH2
ARG
16
1
Y
1
G
CG
ASP
583
C
CG
ASP
17
1
Y
1
G
OD1
ASP
583
C
OD1
ASP
17
1
Y
1
G
OD2
ASP
583
C
OD2
ASP
17
1
Y
1
G
CG
GLU
586
C
CG
GLU
20
1
Y
1
G
CD
GLU
586
C
CD
GLU
20
1
Y
1
G
OE1
GLU
586
C
OE1
GLU
20
1
Y
1
G
OE2
GLU
586
C
OE2
GLU
20
1
Y
1
G
CG
LYS
603
C
CG
LYS
37
1
Y
1
G
CD
LYS
603
C
CD
LYS
37
1
Y
1
G
CE
LYS
603
C
CE
LYS
37
1
Y
1
G
NZ
LYS
603
C
NZ
LYS
37
1
Y
1
G
CG
GLU
627
C
CG
GLU
61
1
Y
1
G
CD
GLU
627
C
CD
GLU
61
1
Y
1
G
OE1
GLU
627
C
OE1
GLU
61
1
Y
1
G
OE2
GLU
627
C
OE2
GLU
61
1
Y
1
G
CG
ARG
628
C
CG
ARG
62
1
Y
1
G
CD
ARG
628
C
CD
ARG
62
1
Y
1
G
NE
ARG
628
C
NE
ARG
62
1
Y
1
G
CZ
ARG
628
C
CZ
ARG
62
1
Y
1
G
NH1
ARG
628
C
NH1
ARG
62
1
Y
1
G
NH2
ARG
628
C
NH2
ARG
62
1
Y
1
H
CG
ASN
574
D
CG
ASN
8
1
Y
1
H
OD1
ASN
574
D
OD1
ASN
8
1
Y
1
H
ND2
ASN
574
D
ND2
ASN
8
1
Y
1
H
CG
GLU
577
D
CG
GLU
11
1
Y
1
H
CD
GLU
577
D
CD
GLU
11
1
Y
1
H
OE1
GLU
577
D
OE1
GLU
11
1
Y
1
H
OE2
GLU
577
D
OE2
GLU
11
1
Y
1
H
CG
ARG
578
D
CG
ARG
12
1
Y
1
H
CD
ARG
578
D
CD
ARG
12
1
Y
1
H
NE
ARG
578
D
NE
ARG
12
1
Y
1
H
CZ
ARG
578
D
CZ
ARG
12
1
Y
1
H
NH1
ARG
578
D
NH1
ARG
12
1
Y
1
H
NH2
ARG
578
D
NH2
ARG
12
1
Y
1
H
CG
ARG
582
D
CG
ARG
16
1
Y
1
H
CD
ARG
582
D
CD
ARG
16
1
Y
1
H
NE
ARG
582
D
NE
ARG
16
1
Y
1
H
CZ
ARG
582
D
CZ
ARG
16
1
Y
1
H
NH1
ARG
582
D
NH1
ARG
16
1
Y
1
H
NH2
ARG
582
D
NH2
ARG
16
1
Y
1
H
CG
GLU
586
D
CG
GLU
20
1
Y
1
H
CD
GLU
586
D
CD
GLU
20
1
Y
1
H
OE1
GLU
586
D
OE1
GLU
20
1
Y
1
H
OE2
GLU
586
D
OE2
GLU
20
1
Y
1
H
CG
LYS
600
D
CG
LYS
34
1
Y
1
H
CD
LYS
600
D
CD
LYS
34
1
Y
1
H
CE
LYS
600
D
CE
LYS
34
1
Y
1
H
NZ
LYS
600
D
NZ
LYS
34
1
Y
1
H
CG
LYS
603
D
CG
LYS
37
1
Y
1
H
CD
LYS
603
D
CD
LYS
37
1
Y
1
H
CE
LYS
603
D
CE
LYS
37
1
Y
1
H
NZ
LYS
603
D
NZ
LYS
37
1
Y
1
H
CG
GLU
627
D
CG
GLU
61
1
Y
1
H
CD
GLU
627
D
CD
GLU
61
1
Y
1
H
OE1
GLU
627
D
OE1
GLU
61
1
Y
1
H
OE2
GLU
627
D
OE2
GLU
61
1
Y
1
H
CG
ARG
628
D
CG
ARG
62
1
Y
1
H
CD
ARG
628
D
CD
ARG
62
1
Y
1
H
NE
ARG
628
D
NE
ARG
62
1
Y
1
H
CZ
ARG
628
D
CZ
ARG
62
1
Y
1
H
NH1
ARG
628
D
NH1
ARG
62
1
Y
1
H
NH2
ARG
628
D
NH2
ARG
62
1
Y
1
X
P
DT
2
E
P
DT
2
1
Y
1
X
OP1
DT
2
E
OP1
DT
2
1
Y
1
X
OP2
DT
2
E
OP2
DT
2
1
Y
1
A
ARG
628
A
ARG
62
1
Y
1
B
ARG
628
B
ARG
62
1
Y
1
G
HIS
567
C
HIS
1
1
Y
1
G
MET
568
C
MET
2
1
Y
1
G
ARG
569
C
ARG
3
1
Y
1
G
ARG
570
C
ARG
4
1
Y
1
G
MET
571
C
MET
5
1
Y
1
G
ALA
572
C
ALA
6
1
Y
1
G
LYS
600
C
LYS
34
1
Y
1
G
SER
601
C
SER
35
1
Y
1
G
ASP
602
C
ASP
36
1
Y
1
H
HIS
567
D
HIS
1
1
Y
1
H
MET
568
D
MET
2
1
Y
1
H
ARG
569
D
ARG
3
1
Y
1
H
ARG
570
D
ARG
4
1
Y
1
H
MET
571
D
MET
5
1
Y
1
H
ALA
572
D
ALA
6
1
Y
1
H
ASN
573
D
ASN
7
1
Y
1
H
SER
601
D
SER
35
1
Y
1
H
ASP
602
D
ASP
36
1
Y
1
X
DT
1
E
DT
1
1
Y
1
W
DT
1
F
DT
1
1
Y
1
H
LEU
599
-129.39
-62.56
0.2668
0.2220
0.2242
1.699
41.817
1304
25959
5.02
93.26
0.17
1
THROUGHOUT
1.96
MOLECULAR REPLACEMENT
34.07
0.90
1.11
PDB entry 2QL2
1.699
41.817
40
2199
4
407
1748
0.002
2225
0.423
3080
18.605
1310
0.027
375
0.002
325
0.4161
0.3259
1.7669
110
1935
67.00
0.3722
0.3068
1.8474
137
2628
88.00
0.3283
0.2852
1.9448
146
2828
97.00
0.2737
0.2616
2.0666
152
2916
99.00
0.2875
0.2383
2.2261
153
2898
99.00
0.2928
0.2272
2.4502
153
2843
97.00
0.2666
0.2252
2.8046
148
2831
96.00
0.2279
0.2342
3.5333
149
2915
100.00
0.2575
0.1923
41.8293
156
2861
97.00
1.699
41.82
6OD4
26021
0.103
0.041
1
16.4
6.2
95.3
0.711
1.70
1.75
3.7
2269
0.522
0.418
1
3.2
83.1
refinement
PHENIX
(1.14_3260: ???)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
N
Human TCF4 C-terminal bHLH domain in Complex with 11-bp Oligonucleotide Containing E-box Sequence
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
HIS
567
A
HIS
1
HELX_P
A
LEU
597
A
LEU
31
1
AA1
31
A
THR
606
A
THR
40
HELX_P
A
GLU
627
A
GLU
61
1
AA2
22
B
MET
568
B
MET
2
HELX_P
B
LEU
597
B
LEU
31
1
AA3
30
B
THR
606
B
THR
40
HELX_P
B
ARG
626
B
ARG
60
1
AA4
21
G
ASN
574
C
ASN
8
HELX_P
G
GLN
596
C
GLN
30
1
AA5
23
G
THR
606
C
THR
40
HELX_P
G
GLU
627
C
GLU
61
1
AA6
22
H
ALA
575
D
ALA
9
HELX_P
H
GLN
596
D
GLN
30
1
AA7
22
H
THR
606
D
THR
40
HELX_P
H
GLU
627
D
GLU
61
1
AA8
22
hydrog
WATSON-CRICK
X
DT
2
E
N3
DT
2
1_555
W
DA
11
F
N1
DA
11
1_555
hydrog
WATSON-CRICK
X
DT
2
E
O4
DT
2
1_555
W
DA
11
F
N6
DA
11
1_555
hydrog
WATSON-CRICK
X
DA
3
E
N1
DA
3
1_555
W
DT
10
F
N3
DT
10
1_555
hydrog
WATSON-CRICK
X
DA
3
E
N6
DA
3
1_555
W
DT
10
F
O4
DT
10
1_555
hydrog
WATSON-CRICK
X
DC
4
E
N3
DC
4
1_555
W
DG
9
F
N1
DG
9
1_555
hydrog
WATSON-CRICK
X
DC
4
E
N4
DC
4
1_555
W
DG
9
F
O6
DG
9
1_555
hydrog
WATSON-CRICK
X
DC
4
E
O2
DC
4
1_555
W
DG
9
F
N2
DG
9
1_555
hydrog
WATSON-CRICK
X
DA
5
E
N1
DA
5
1_555
W
DT
8
F
N3
DT
8
1_555
hydrog
WATSON-CRICK
X
DA
5
E
N6
DA
5
1_555
W
DT
8
F
O4
DT
8
1_555
hydrog
WATSON-CRICK
X
DC
6
E
N3
DC
6
1_555
W
DG
7
F
N1
DG
7
1_555
hydrog
WATSON-CRICK
X
DC
6
E
N4
DC
6
1_555
W
DG
7
F
O6
DG
7
1_555
hydrog
WATSON-CRICK
X
DC
6
E
O2
DC
6
1_555
W
DG
7
F
N2
DG
7
1_555
hydrog
WATSON-CRICK
X
DG
7
E
N1
DG
7
1_555
W
DC
6
F
N3
DC
6
1_555
hydrog
WATSON-CRICK
X
DG
7
E
N2
DG
7
1_555
W
DC
6
F
O2
DC
6
1_555
hydrog
WATSON-CRICK
X
DG
7
E
O6
DG
7
1_555
W
DC
6
F
N4
DC
6
1_555
hydrog
WATSON-CRICK
X
DT
8
E
N3
DT
8
1_555
W
DA
5
F
N1
DA
5
1_555
hydrog
WATSON-CRICK
X
DT
8
E
O4
DT
8
1_555
W
DA
5
F
N6
DA
5
1_555
hydrog
WATSON-CRICK
X
DG
9
E
N1
DG
9
1_555
W
DC
4
F
N3
DC
4
1_555
hydrog
WATSON-CRICK
X
DG
9
E
N2
DG
9
1_555
W
DC
4
F
O2
DC
4
1_555
hydrog
WATSON-CRICK
X
DG
9
E
O6
DG
9
1_555
W
DC
4
F
N4
DC
4
1_555
hydrog
TYPE_11_PAIR
X
DG
9
E
N2
DG
9
1_555
X
DA
11
E
N7
DA
11
1_555
hydrog
TYPE_11_PAIR
X
DG
9
E
N3
DG
9
1_555
X
DA
11
E
N6
DA
11
1_555
hydrog
WATSON-CRICK
X
DT
10
E
N3
DT
10
1_555
W
DA
3
F
N1
DA
3
1_555
hydrog
WATSON-CRICK
X
DT
10
E
O4
DT
10
1_555
W
DA
3
F
N6
DA
3
1_555
hydrog
DA-DA MISPAIR
X
DA
11
E
N6
DA
11
1_555
W
DA
5
F
N3
DA
5
1_555
TRANSCRIPTION/DNA
protein-DNA complex, transcription factor, bHTH, E-Box, TRANSCRIPTION-DNA complex
ITF2_HUMAN
UNP
1
405
P15884
P15884-8
RRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRER
6OD4
PDB
2
1
6OD4
405
464
6OD4
569
628
P15884
A
1
3
62
405
464
6OD4
569
628
P15884
B
1
3
62
405
464
6OD4
569
628
P15884
G
1
3
62
405
464
6OD4
569
628
P15884
H
1
3
62
1
11
6OD4
1
11
6OD4
X
2
1
11
1
11
6OD4
1
11
6OD4
W
2
1
11
1
expression tag
HIS
567
6OD4
A
P15884
UNP
1
1
expression tag
MET
568
6OD4
A
P15884
UNP
2
2
expression tag
HIS
567
6OD4
B
P15884
UNP
1
2
expression tag
MET
568
6OD4
B
P15884
UNP
2
3
expression tag
HIS
567
6OD4
G
P15884
UNP
1
3
expression tag
MET
568
6OD4
G
P15884
UNP
2
4
expression tag
HIS
567
6OD4
H
P15884
UNP
1
4
expression tag
MET
568
6OD4
H
P15884
UNP
2
binding site for residue EDO W 201
W
EDO
201
Software
4
W
DG
9
F
DG
9
4
1_555
W
DT
10
F
DT
10
4
1_555
X
DA
5
E
DA
5
4
1_555
X
DC
6
E
DC
6
4
1_555
1
P 1