0.024522
0.000000
0.007666
0.000000
0.007601
0.000000
0.000000
0.000000
0.022747
0.00000
0.00000
0.00000
Kim, Y.
Stogios, P.
Skarina, T.
Di, R.
Joachimiak, A.
Center for Structural Genomics of Infectious Diseases (CSGID)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
107.36
90.00
40.780
131.570
46.060
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
O
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
N
N
100
S
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
N
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
N
N
120
S
C
N
121
N
C
N
122
N
O
N
123
N
C
N
124
N
C
N
125
N
C
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
N
C
N
140
N
C
N
141
N
O
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
N
C
Y
153
N
C
Y
154
N
N
Y
155
N
C
Y
156
N
C
Y
157
N
N
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
N
N
173
S
C
N
174
N
C
N
175
N
O
N
176
S
C
N
177
N
C
N
178
N
C
N
179
N
C
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
N
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
S
C
N
243
N
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
N
S
N
248
N
C
N
249
N
O
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
N
289
N
C
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
O
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
R
C
N
320
N
O
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
N
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
N
370
N
O
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
N
388
N
C
N
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
sing
Y
335
N
doub
N
336
N
sing
Y
337
N
doub
N
338
N
sing
Y
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
To Be Published
0353
Crystal Structure of the D-alanyl-D-alanine carboxypeptidase DacD from Francisella tularensis
10.2210/pdb6osu/pdb
pdb_00006osu
100
1
N
PIXEL
2018-03-06
DECTRIS PILATUS3 X 6M
SINGLE WAVELENGTH
M
x-ray
1
0.97918
1.0
19-ID
APS
0.97918
SYNCHROTRON
APS BEAMLINE 19-ID
46405.188
D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein) family protein
3.4.16.4
1
man
polymer
35.453
CHLORIDE ION
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
18.015
water
36
nat
water
D-alanyl-D-alanine carboxypeptidase family protein
no
no
SNAAPNISAYSDPYFNGANGLAQKDIIIRPANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKA
GNLSWDTMIPISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQTAKAIGMNNTH
FANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQDSVSIADRKQCLPKFDRATGNVIESYTVKDL
DDQAKDKCNKLFPKGDNFVLQNNRNRLLFTFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKL
LRYALSKYENVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAPIKTGQTVGNLV
ITLGDTKEEIASIPVVAMNNVSQKGWW
SNAAPNISAYSDPYFNGANGLAQKDIIIRPANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKA
GNLSWDTMIPISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQTAKAIGMNNTH
FANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQDSVSIADRKQCLPKFDRATGNVIESYTVKDL
DDQAKDKCNKLFPKGDNFVLQNNRNRLLFTFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKL
LRYALSKYENVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAPIKTGQTVGNLV
ITLGDTKEEIASIPVVAMNNVSQKGWW
A
CSGID-IDP02286
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
427
dacD, FTT_1029, BZ14_1819
177416
Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
SCHU S4 / Schu 4
469008
Escherichia coli BL21(DE3)
BL21 DE3 (gold)
Biological sequence
1
2.54
51.60
VAPOR DIFFUSION, SITTING DROP
10 %(w/v) PEG 6000, 0.1 M calcium chloride, 0.1 M Hepes pH 7.5, 10 mM Penicillin G
289
Center for Structural Genomics of Infectious Diseases
CSGID
NIAID, National Institute of Allergy and Infectious Diseases
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Author supporting evidence
Data collection
Database references
Refinement description
1
0
2019-05-15
1
1
2019-12-18
1
2
2023-10-11
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
Y
RCSB
Y
RCSB
2019-05-02
REL
REL
CL
CHLORIDE ION
EDO
1,2-ETHANEDIOL
HOH
water
4K91
PDBID 4K91
PDB
experimental model
CL
450
2
CL
CL
501
A
EDO
451
3
EDO
EDO
502
A
HOH
5
4
HOH
HOH
601
A
HOH
4
4
HOH
HOH
602
A
HOH
11
4
HOH
HOH
603
A
HOH
23
4
HOH
HOH
604
A
HOH
30
4
HOH
HOH
605
A
HOH
9
4
HOH
HOH
606
A
HOH
21
4
HOH
HOH
607
A
HOH
14
4
HOH
HOH
608
A
HOH
19
4
HOH
HOH
609
A
HOH
22
4
HOH
HOH
610
A
HOH
25
4
HOH
HOH
611
A
HOH
1
4
HOH
HOH
612
A
HOH
10
4
HOH
HOH
613
A
HOH
7
4
HOH
HOH
614
A
HOH
28
4
HOH
HOH
615
A
HOH
8
4
HOH
HOH
616
A
HOH
36
4
HOH
HOH
617
A
HOH
3
4
HOH
HOH
618
A
HOH
32
4
HOH
HOH
619
A
HOH
34
4
HOH
HOH
620
A
HOH
20
4
HOH
HOH
621
A
HOH
26
4
HOH
HOH
622
A
HOH
17
4
HOH
HOH
623
A
HOH
13
4
HOH
HOH
624
A
HOH
12
4
HOH
HOH
625
A
HOH
24
4
HOH
HOH
626
A
HOH
18
4
HOH
HOH
627
A
HOH
2
4
HOH
HOH
628
A
HOH
6
4
HOH
HOH
629
A
HOH
27
4
HOH
HOH
630
A
HOH
15
4
HOH
HOH
631
A
HOH
16
4
HOH
HOH
632
A
HOH
29
4
HOH
HOH
633
A
HOH
31
4
HOH
HOH
634
A
HOH
35
4
HOH
HOH
635
A
HOH
33
4
HOH
HOH
636
A
n
1
18
A
n
2
19
A
n
3
20
A
n
4
21
A
n
5
22
A
n
6
23
A
n
7
24
A
n
8
25
A
n
9
26
A
n
10
27
A
n
11
28
A
ASP
29
n
12
ASP
29
A
PRO
30
n
13
PRO
30
A
TYR
31
n
14
TYR
31
A
PHE
32
n
15
PHE
32
A
ASN
33
n
16
ASN
33
A
GLY
34
n
17
GLY
34
A
ALA
35
n
18
ALA
35
A
ASN
36
n
19
ASN
36
A
GLY
37
n
20
GLY
37
A
LEU
38
n
21
LEU
38
A
ALA
39
n
22
ALA
39
A
GLN
40
n
23
GLN
40
A
LYS
41
n
24
LYS
41
A
ASP
42
n
25
ASP
42
A
ILE
43
n
26
ILE
43
A
ILE
44
n
27
ILE
44
A
ILE
45
n
28
ILE
45
A
ARG
46
n
29
ARG
46
A
PRO
47
n
30
PRO
47
A
ALA
48
n
31
ALA
48
A
ASN
49
n
32
ASN
49
A
ILE
50
n
33
ILE
50
A
GLU
51
n
34
GLU
51
A
LEU
52
n
35
LEU
52
A
ASP
53
n
36
ASP
53
A
ALA
54
n
37
ALA
54
A
PRO
55
n
38
PRO
55
A
ALA
56
n
39
ALA
56
A
TRP
57
n
40
TRP
57
A
VAL
58
n
41
VAL
58
A
THR
59
n
42
THR
59
A
MET
60
n
43
MET
60
A
ASP
61
n
44
ASP
61
A
TYR
62
n
45
TYR
62
A
ARG
63
n
46
ARG
63
A
THR
64
n
47
THR
64
A
GLY
65
n
48
GLY
65
A
ASP
66
n
49
ASP
66
A
ILE
67
n
50
ILE
67
A
VAL
68
n
51
VAL
68
A
SER
69
n
52
SER
69
A
GLU
70
n
53
GLU
70
A
LYS
71
n
54
LYS
71
A
ASN
72
n
55
ASN
72
A
MET
73
n
56
MET
73
A
ASP
74
n
57
ASP
74
A
VAL
75
n
58
VAL
75
A
ARG
76
n
59
ARG
76
A
ARG
77
n
60
ARG
77
A
ALA
78
n
61
ALA
78
A
PRO
79
n
62
PRO
79
A
ALA
80
n
63
ALA
80
A
SER
81
n
64
SER
81
A
LEU
82
n
65
LEU
82
A
THR
83
n
66
THR
83
A
LYS
84
n
67
LYS
84
A
ILE
85
n
68
ILE
85
A
MET
86
n
69
MET
86
A
THR
87
n
70
THR
87
A
SER
88
n
71
SER
88
A
TYR
89
n
72
TYR
89
A
ILE
90
n
73
ILE
90
A
VAL
91
n
74
VAL
91
A
ALA
92
n
75
ALA
92
A
SER
93
n
76
SER
93
A
GLU
94
n
77
GLU
94
A
ILE
95
n
78
ILE
95
A
LYS
96
n
79
LYS
96
A
ALA
97
n
80
ALA
97
A
GLY
98
n
81
GLY
98
A
ASN
99
n
82
ASN
99
A
LEU
100
n
83
LEU
100
A
SER
101
n
84
SER
101
A
TRP
102
n
85
TRP
102
A
ASP
103
n
86
ASP
103
A
THR
104
n
87
THR
104
A
MET
105
n
88
MET
105
A
ILE
106
n
89
ILE
106
A
PRO
107
n
90
PRO
107
A
ILE
108
n
91
ILE
108
A
SER
109
n
92
SER
109
A
GLU
110
n
93
GLU
110
A
ASN
111
n
94
ASN
111
A
ALA
112
n
95
ALA
112
A
ALA
113
n
96
ALA
113
A
SER
114
n
97
SER
114
A
THR
115
n
98
THR
115
A
GLY
116
n
99
GLY
116
A
GLY
117
n
100
GLY
117
A
SER
118
n
101
SER
118
A
LYS
119
n
102
LYS
119
A
MET
120
n
103
MET
120
A
TYR
121
n
104
TYR
121
A
VAL
122
n
105
VAL
122
A
LYS
123
n
106
LYS
123
A
ALA
124
n
107
ALA
124
A
GLY
125
n
108
GLY
125
A
ALA
126
n
109
ALA
126
A
LYS
127
n
110
LYS
127
A
VAL
128
n
111
VAL
128
A
SER
129
n
112
SER
129
A
VAL
130
n
113
VAL
130
A
ARG
131
n
114
ARG
131
A
ASN
132
n
115
ASN
132
A
LEU
133
n
116
LEU
133
A
VAL
134
n
117
VAL
134
A
THR
135
n
118
THR
135
A
GLY
136
n
119
GLY
136
A
MET
137
n
120
MET
137
A
ASP
138
n
121
ASP
138
A
VAL
139
n
122
VAL
139
A
VAL
140
n
123
VAL
140
A
SER
141
n
124
SER
141
A
GLY
142
n
125
GLY
142
A
ASN
143
n
126
ASN
143
A
ASP
144
n
127
ASP
144
A
ALA
145
n
128
ALA
145
A
THR
146
n
129
THR
146
A
ILE
147
n
130
ILE
147
A
ALA
148
n
131
ALA
148
A
LEU
149
n
132
LEU
149
A
ALA
150
n
133
ALA
150
A
GLU
151
n
134
GLU
151
A
TYR
152
n
135
TYR
152
A
ILE
153
n
136
ILE
153
A
GLY
154
n
137
GLY
154
A
GLY
155
n
138
GLY
155
A
THR
156
n
139
THR
156
A
THR
157
n
140
THR
157
A
GLN
158
n
141
GLN
158
A
ALA
159
n
142
ALA
159
A
PHE
160
n
143
PHE
160
A
THR
161
n
144
THR
161
A
ASP
162
n
145
ASP
162
A
LEU
163
n
146
LEU
163
A
MET
164
n
147
MET
164
A
ASN
165
n
148
ASN
165
A
GLN
166
n
149
GLN
166
A
THR
167
n
150
THR
167
A
ALA
168
n
151
ALA
168
A
LYS
169
n
152
LYS
169
A
ALA
170
n
153
ALA
170
A
ILE
171
n
154
ILE
171
A
GLY
172
n
155
GLY
172
A
MET
173
n
156
MET
173
A
ASN
174
n
157
ASN
174
A
ASN
175
n
158
ASN
175
A
THR
176
n
159
THR
176
A
HIS
177
n
160
HIS
177
A
PHE
178
n
161
PHE
178
A
ALA
179
n
162
ALA
179
A
ASN
180
n
163
ASN
180
A
PRO
181
n
164
PRO
181
A
ASP
182
n
165
ASP
182
A
GLY
183
n
166
GLY
183
A
LEU
184
n
167
LEU
184
A
PRO
185
n
168
PRO
185
A
GLY
186
n
169
GLY
186
A
GLY
187
n
170
GLY
187
A
GLU
188
n
171
GLU
188
A
GLN
189
n
172
GLN
189
A
TYR
190
n
173
TYR
190
A
THR
191
n
174
THR
191
A
THR
192
n
175
THR
192
A
ALA
193
n
176
ALA
193
A
HIS
194
n
177
HIS
194
A
ASP
195
n
178
ASP
195
A
MET
196
n
179
MET
196
A
ALA
197
n
180
ALA
197
A
LEU
198
n
181
LEU
198
A
LEU
199
n
182
LEU
199
A
ALA
200
n
183
ALA
200
A
ARG
201
n
184
ARG
201
A
SER
202
n
185
SER
202
A
TYR
203
n
186
TYR
203
A
ILE
204
n
187
ILE
204
A
TYR
205
n
188
TYR
205
A
ASN
206
n
189
ASN
206
A
PHE
207
n
190
PHE
207
A
PRO
208
n
191
PRO
208
A
GLU
209
n
192
GLU
209
A
ALA
210
n
193
ALA
210
A
TYR
211
n
194
TYR
211
A
LYS
212
n
195
LYS
212
A
VAL
213
n
196
VAL
213
A
TYR
214
n
197
TYR
214
A
ASP
215
n
198
ASP
215
A
ASP
216
n
199
ASP
216
A
LYS
217
n
200
LYS
217
A
GLY
218
n
201
GLY
218
A
LEU
219
n
202
LEU
219
A
VAL
220
n
203
VAL
220
A
TRP
221
n
204
TRP
221
A
ASN
222
n
205
ASN
222
A
ALA
223
n
206
ALA
223
A
THR
224
n
207
THR
224
A
LYS
225
n
208
LYS
225
A
GLN
226
n
209
GLN
226
A
ASP
227
n
210
ASP
227
A
SER
228
n
211
SER
228
A
VAL
229
n
212
VAL
229
A
SER
230
n
213
SER
230
A
ILE
231
n
214
ILE
231
A
ALA
232
n
215
ALA
232
A
ASP
233
n
216
ASP
233
A
ARG
234
n
217
ARG
234
A
LYS
235
n
218
LYS
235
A
GLN
236
n
219
GLN
236
A
CYS
237
n
220
CYS
237
A
LEU
238
n
221
LEU
238
A
PRO
239
n
222
PRO
239
A
LYS
240
n
223
LYS
240
A
PHE
241
n
224
PHE
241
A
ASP
242
n
225
ASP
242
A
ARG
243
n
226
ARG
243
A
ALA
244
n
227
ALA
244
A
THR
245
n
228
THR
245
A
GLY
246
n
229
GLY
246
A
ASN
247
n
230
ASN
247
A
VAL
248
n
231
VAL
248
A
ILE
249
n
232
ILE
249
A
GLU
250
n
233
GLU
250
A
SER
251
n
234
SER
251
A
TYR
252
n
235
TYR
252
A
THR
253
n
236
THR
253
A
VAL
254
n
237
VAL
254
A
LYS
255
n
238
LYS
255
A
ASP
256
n
239
ASP
256
A
LEU
257
n
240
LEU
257
A
ASP
258
n
241
ASP
258
A
ASP
259
n
242
ASP
259
A
GLN
260
n
243
GLN
260
A
ALA
261
n
244
ALA
261
A
LYS
262
n
245
LYS
262
A
ASP
263
n
246
ASP
263
A
LYS
264
n
247
LYS
264
A
CYS
265
n
248
CYS
265
A
ASN
266
n
249
ASN
266
A
LYS
267
n
250
LYS
267
A
LEU
268
n
251
LEU
268
A
PHE
269
n
252
PHE
269
A
PRO
270
n
253
PRO
270
A
LYS
271
n
254
LYS
271
A
GLY
272
n
255
GLY
272
A
ASP
273
n
256
ASP
273
A
ASN
274
n
257
ASN
274
A
PHE
275
n
258
PHE
275
A
VAL
276
n
259
VAL
276
A
LEU
277
n
260
LEU
277
A
GLN
278
n
261
GLN
278
A
ASN
279
n
262
ASN
279
A
ASN
280
n
263
ASN
280
A
ARG
281
n
264
ARG
281
A
ASN
282
n
265
ASN
282
A
ARG
283
n
266
ARG
283
A
LEU
284
n
267
LEU
284
A
LEU
285
n
268
LEU
285
A
PHE
286
n
269
PHE
286
A
THR
287
n
270
THR
287
A
PHE
288
n
271
PHE
288
A
ASP
289
n
272
ASP
289
A
GLY
290
n
273
GLY
290
A
ALA
291
n
274
ALA
291
A
ASP
292
n
275
ASP
292
A
GLY
293
n
276
GLY
293
A
MET
294
n
277
MET
294
A
LYS
295
n
278
LYS
295
A
THR
296
n
279
THR
296
A
GLY
297
n
280
GLY
297
A
HIS
298
n
281
HIS
298
A
THR
299
n
282
THR
299
A
ASP
300
n
283
ASP
300
A
ALA
301
n
284
ALA
301
A
ALA
302
n
285
ALA
302
A
GLY
303
n
286
GLY
303
A
TYR
304
n
287
TYR
304
A
CYS
305
n
288
CYS
305
A
LEU
306
n
289
LEU
306
A
VAL
307
n
290
VAL
307
A
SER
308
n
291
SER
308
A
SER
309
n
292
SER
309
A
ALA
310
n
293
ALA
310
A
LYS
311
n
294
LYS
311
A
GLN
312
n
295
GLN
312
A
ASP
313
n
296
ASP
313
A
GLY
314
n
297
GLY
314
A
GLU
315
n
298
GLU
315
A
ARG
316
n
299
ARG
316
A
PHE
317
n
300
PHE
317
A
ILE
318
n
301
ILE
318
A
SER
319
n
302
SER
319
A
VAL
320
n
303
VAL
320
A
VAL
321
n
304
VAL
321
A
LEU
322
n
305
LEU
322
A
GLY
323
n
306
GLY
323
A
THR
324
n
307
THR
324
A
THR
325
n
308
THR
325
A
SER
326
n
309
SER
326
A
SER
327
n
310
SER
327
A
ALA
328
n
311
ALA
328
A
LYS
329
n
312
LYS
329
A
ARG
330
n
313
ARG
330
A
ASP
331
n
314
ASP
331
A
SER
332
n
315
SER
332
A
GLU
333
n
316
GLU
333
A
SER
334
n
317
SER
334
A
ALA
335
n
318
ALA
335
A
LYS
336
n
319
LYS
336
A
LEU
337
n
320
LEU
337
A
LEU
338
n
321
LEU
338
A
ARG
339
n
322
ARG
339
A
TYR
340
n
323
TYR
340
A
ALA
341
n
324
ALA
341
A
LEU
342
n
325
LEU
342
A
SER
343
n
326
SER
343
A
LYS
344
n
327
LYS
344
A
TYR
345
n
328
TYR
345
A
GLU
346
n
329
GLU
346
A
ASN
347
n
330
ASN
347
A
VAL
348
n
331
VAL
348
A
LEU
349
n
332
LEU
349
A
LEU
350
n
333
LEU
350
A
TYR
351
n
334
TYR
351
A
LYS
352
n
335
LYS
352
A
ALA
353
n
336
ALA
353
A
ASN
354
n
337
ASN
354
A
SER
355
n
338
SER
355
A
PRO
356
n
339
PRO
356
A
VAL
357
n
340
VAL
357
A
THR
358
n
341
THR
358
A
ILE
359
n
342
ILE
359
A
SER
360
n
343
SER
360
A
ALA
361
n
344
ALA
361
A
ASP
362
n
345
ASP
362
A
ASN
363
n
346
ASN
363
A
ILE
364
n
347
ILE
364
A
PRO
365
n
348
PRO
365
A
ASN
366
n
349
ASN
366
A
ALA
367
n
350
ALA
367
A
LYS
368
n
351
LYS
368
A
ALA
369
n
352
ALA
369
A
GLY
370
n
353
GLY
370
A
GLN
371
n
354
GLN
371
A
LYS
372
n
355
LYS
372
A
LEU
373
n
356
LEU
373
A
THR
374
n
357
THR
374
A
VAL
375
n
358
VAL
375
A
ALA
376
n
359
ALA
376
A
SER
377
n
360
SER
377
A
ASN
378
n
361
ASN
378
A
GLN
379
n
362
GLN
379
A
ASN
380
n
363
ASN
380
A
ILE
381
n
364
ILE
381
A
TYR
382
n
365
TYR
382
A
LYS
383
n
366
LYS
383
A
THR
384
n
367
THR
384
A
VAL
385
n
368
VAL
385
A
PRO
386
n
369
PRO
386
A
LYS
387
n
370
LYS
387
A
THR
388
n
371
THR
388
A
TYR
389
n
372
TYR
389
A
VAL
390
n
373
VAL
390
A
PRO
391
n
374
PRO
391
A
TYR
392
n
375
TYR
392
A
LEU
393
n
376
LEU
393
A
LYS
394
n
377
LYS
394
A
GLN
395
n
378
GLN
395
A
GLY
396
n
379
GLY
396
A
ILE
397
n
380
ILE
397
A
GLU
398
n
381
GLU
398
A
PHE
399
n
382
PHE
399
A
ASN
400
n
383
ASN
400
A
PRO
401
n
384
PRO
401
A
ASN
402
n
385
ASN
402
A
LEU
403
n
386
LEU
403
A
ASN
404
n
387
ASN
404
A
ALA
405
n
388
ALA
405
A
PRO
406
n
389
PRO
406
A
ILE
407
n
390
ILE
407
A
LYS
408
n
391
LYS
408
A
THR
409
n
392
THR
409
A
GLY
410
n
393
GLY
410
A
GLN
411
n
394
GLN
411
A
THR
412
n
395
THR
412
A
VAL
413
n
396
VAL
413
A
GLY
414
n
397
GLY
414
A
ASN
415
n
398
ASN
415
A
LEU
416
n
399
LEU
416
A
VAL
417
n
400
VAL
417
A
ILE
418
n
401
ILE
418
A
THR
419
n
402
THR
419
A
LEU
420
n
403
LEU
420
A
GLY
421
n
404
GLY
421
A
ASP
422
n
405
ASP
422
A
THR
423
n
406
THR
423
A
LYS
424
n
407
LYS
424
A
GLU
425
n
408
GLU
425
A
GLU
426
n
409
GLU
426
A
ILE
427
n
410
ILE
427
A
ALA
428
n
411
ALA
428
A
SER
429
n
412
SER
429
A
ILE
430
n
413
ILE
430
A
PRO
431
n
414
PRO
431
A
VAL
432
n
415
VAL
432
A
VAL
433
n
416
VAL
433
A
ALA
434
n
417
ALA
434
A
MET
435
n
418
MET
435
A
ASN
436
n
419
ASN
436
A
ASN
437
n
420
ASN
437
A
VAL
438
n
421
VAL
438
A
SER
439
n
422
SER
439
A
GLN
440
n
423
GLN
440
A
LYS
441
n
424
LYS
441
A
n
425
442
A
n
426
443
A
n
427
444
A
1.1806
0.3534
3.1932
0.5400
0.4920
8.7383
-0.0528
0.0716
-0.0250
0.2336
0.0188
-0.0217
-0.3074
-1.1759
0.2206
0.6053
0.0945
-0.0988
0.7456
-0.0179
0.6933
refined
40.7750
71.9762
75.7519
X-RAY DIFFRACTION
1.8637
0.4641
1.0258
3.6253
1.0889
4.3795
-0.0295
0.3514
0.0351
-0.2737
-0.0665
0.1696
-0.2042
-0.0436
0.1377
0.3055
0.0696
-0.0213
0.4266
0.0312
0.4647
refined
21.9220
62.6685
34.7532
X-RAY DIFFRACTION
3.0986
0.5781
0.9336
4.9260
0.1368
4.5132
0.0413
-0.2546
-0.6404
0.5351
-0.0606
1.0141
1.1902
-0.5462
-0.0463
1.0818
-0.1567
0.1042
0.5921
-0.0209
0.9240
refined
14.1870
33.6039
38.8346
X-RAY DIFFRACTION
2.1759
1.2026
0.9776
5.4086
1.7003
3.6993
0.0026
0.0113
-0.4641
0.3986
-0.1551
0.1203
0.6688
0.1630
0.0891
0.5366
0.0601
-0.0331
0.4358
0.0561
0.5558
refined
27.4069
53.1406
44.0609
X-RAY DIFFRACTION
2.0856
-0.7827
-0.5270
3.6667
0.6158
2.6270
-0.0944
-0.6245
0.0907
0.5042
0.1942
-0.0153
-0.4539
0.3523
-0.1372
0.5683
-0.0508
-0.0276
0.5892
0.0030
0.4553
refined
25.9537
78.5273
62.5644
X-RAY DIFFRACTION
3.6332
0.4034
-0.4378
9.6502
0.8087
2.6338
-0.0233
-0.1052
0.6152
-0.0265
-0.0942
0.5458
-1.0720
-0.1021
0.1479
0.8152
0.0498
-0.0340
0.5080
-0.0331
0.4623
refined
23.3743
89.3108
64.9926
X-RAY DIFFRACTION
3.7900
1.9390
-0.9027
8.3668
3.1832
2.5075
0.2561
-0.6775
0.8341
0.0152
-0.3871
0.5928
-1.0963
-0.1639
0.0120
1.0369
0.0620
-0.0221
0.7649
-0.0948
0.6812
refined
23.4490
94.5428
65.8334
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 29 through 55 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 56 through 215 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 216 through 268 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 269 through 326 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 327 through 371 )
X-RAY DIFFRACTION
6
chain 'A' and (resid 372 through 420 )
X-RAY DIFFRACTION
7
chain 'A' and (resid 421 through 441 )
author_and_software_defined_assembly
PISA
1
monomeric
none
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
69
A
O
SER
52
A
N
THR
59
A
N
THR
42
A
N
MET
60
A
N
MET
43
A
O
ILE
318
A
O
ILE
301
A
O
SER
319
A
O
SER
302
A
N
SER
308
A
N
SER
291
A
O
CYS
305
A
O
CYS
288
A
N
GLY
297
A
N
GLY
280
A
N
ILE
106
A
N
ILE
89
A
O
VAL
128
A
O
VAL
111
A
O
ASP
227
A
O
ASP
210
A
N
ASN
222
A
N
ASN
205
A
N
LEU
219
A
N
LEU
202
A
O
GLN
278
A
O
GLN
261
A
N
LYS
240
A
N
LYS
223
A
O
ILE
249
A
O
ILE
232
A
N
GLU
346
A
N
GLU
329
A
O
VAL
385
A
O
VAL
368
A
N
ILE
359
A
N
ILE
342
A
O
LEU
373
A
O
LEU
356
A
N
ALA
376
A
N
ALA
359
A
O
VAL
433
A
O
VAL
416
A
O
ILE
427
A
O
ILE
410
A
N
ILE
418
A
N
ILE
401
A
O
VAL
417
A
O
VAL
400
A
N
GLY
396
A
N
GLY
379
1
A
SER
18
A
SER
1
1
Y
1
A
ASN
19
A
ASN
2
1
Y
1
A
ALA
20
A
ALA
3
1
Y
1
A
ALA
21
A
ALA
4
1
Y
1
A
PRO
22
A
PRO
5
1
Y
1
A
ASN
23
A
ASN
6
1
Y
1
A
ILE
24
A
ILE
7
1
Y
1
A
SER
25
A
SER
8
1
Y
1
A
ALA
26
A
ALA
9
1
Y
1
A
TYR
27
A
TYR
10
1
Y
1
A
SER
28
A
SER
11
1
Y
1
A
GLY
442
A
GLY
425
1
Y
1
A
TRP
443
A
TRP
426
1
Y
1
A
TRP
444
A
TRP
427
1
Y
1
A
ALA
80
58.79
-146.67
1
A
TYR
121
72.17
55.05
1
A
GLN
189
-161.79
115.51
1
A
PRO
270
-62.80
-174.86
1
A
MET
294
-135.33
-63.05
75.2
0.2292
0.1824
0.1846
2.440
33.498
837
17084
4.90
99.19
0.31
1
THROUGHOUT
0.32
MOLECULAR REPLACEMENT
24.68
0.90
1.11
PDBID 4K91
2.440
33.498
36
3191
5
0
3150
0.003
3220
0.555
4368
15.826
1962
0.044
499
0.004
570
0.2920
0.2862
2.5929
129
2654
97.00
0.2768
0.2489
2.7930
139
2691
100.00
0.2809
0.2357
3.0739
154
2716
100.00
0.2899
0.2153
3.5183
133
2723
100.00
0.2020
0.1661
4.4310
147
2715
100.00
0.1954
0.1455
33.5015
135
2748
99.00
53.7
2.44
33.50
6OSU
17114
0.998
0.084
1
13.4
6.8
99.4
2.44
2.48
781
1
refinement
PHENIX
(1.13_2998: ???)
data collection
SBC-Collect
data reduction
DIALS
data reduction
xia2
data scaling
Aimless
phasing
HKL-3000
phasing
MOLREP
N
Crystal Structure of the D-alanyl-D-alanine carboxypeptidase DacD from Francisella tularensis
1
N
N
2
N
N
3
N
N
4
N
N
A
GLY
34
A
GLY
17
HELX_P
A
ALA
39
A
ALA
22
1
AA1
6
A
PRO
79
A
PRO
62
HELX_P
A
SER
81
A
SER
64
5
AA2
3
A
LEU
82
A
LEU
65
HELX_P
A
ALA
97
A
ALA
80
1
AA3
16
A
SER
109
A
SER
92
HELX_P
A
SER
114
A
SER
97
1
AA4
6
A
VAL
130
A
VAL
113
HELX_P
A
VAL
140
A
VAL
123
1
AA5
11
A
GLY
142
A
GLY
125
HELX_P
A
GLY
155
A
GLY
138
1
AA6
14
A
THR
156
A
THR
139
HELX_P
A
GLY
172
A
GLY
155
1
AA7
17
A
THR
192
A
THR
175
HELX_P
A
PHE
207
A
PHE
190
1
AA8
16
A
PHE
207
A
PHE
190
HELX_P
A
LYS
212
A
LYS
195
1
AA9
6
A
VAL
213
A
VAL
196
HELX_P
A
ASP
216
A
ASP
199
5
AB1
4
A
SER
230
A
SER
213
HELX_P
A
LEU
238
A
LEU
221
1
AB2
9
A
ASP
258
A
ASP
241
HELX_P
A
PHE
269
A
PHE
252
1
AB3
12
A
ARG
283
A
ARG
266
HELX_P
A
PHE
288
A
PHE
271
1
AB4
6
A
SER
326
A
SER
309
HELX_P
A
LYS
344
A
LYS
327
1
AB5
19
A
THR
388
A
THR
371
HELX_P
A
PRO
391
A
PRO
374
5
AB6
4
disulf
2.034
A
CYS
237
A
SG
CYS
220
1_555
A
CYS
265
A
SG
CYS
248
1_555
HYDROLASE
serine protease, penicillin binding protein, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, HYDROLASE
A
GLY
293
A
GLY
276
1
A
MET
294
A
MET
277
3.00
A
ALA
405
A
ALA
388
1
A
PRO
406
A
PRO
389
4.68
Q5NG28_FRATT
UNP
1
21
Q5NG28
APNISAYSDPYFNGANGLAQKDIIIRPANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNL
SWDTMIPISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQTAKAIGMNNTHFAN
PDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQDSVSIADRKQCLPKFDRATGNVIESYTVKDLDDQ
AKDKCNKLFPKGDNFVLQNNRNRLLFTFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRY
ALSKYENVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAPIKTGQTVGNLVITL
GDTKEEIASIPVVAMNNVSQKGWW
21
444
6OSU
21
444
Q5NG28
A
1
4
427
1
expression tag
SER
18
6OSU
A
Q5NG28
UNP
1
1
expression tag
ASN
19
6OSU
A
Q5NG28
UNP
2
1
expression tag
ALA
20
6OSU
A
Q5NG28
UNP
3
5
2
3
2
2
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
67
A
ILE
50
A
LYS
71
A
LYS
54
A
ALA
56
A
ALA
39
A
ASP
61
A
ASP
44
A
GLU
315
A
GLU
298
A
THR
324
A
THR
307
A
GLY
303
A
GLY
286
A
GLN
312
A
GLN
295
A
ALA
291
A
ALA
274
A
THR
299
A
THR
282
A
MET
105
A
MET
88
A
PRO
107
A
PRO
90
A
LYS
127
A
LYS
110
A
SER
129
A
SER
112
A
ASP
227
A
ASP
210
A
VAL
229
A
VAL
212
A
GLY
218
A
GLY
201
A
ASN
222
A
ASN
205
A
PHE
275
A
PHE
258
A
ASN
279
A
ASN
262
A
LYS
240
A
LYS
223
A
PHE
241
A
PHE
224
A
VAL
248
A
VAL
231
A
GLU
250
A
GLU
233
A
TYR
345
A
TYR
328
A
TYR
351
A
TYR
334
A
ILE
381
A
ILE
364
A
PRO
386
A
PRO
369
A
VAL
357
A
VAL
340
A
SER
360
A
SER
343
A
LYS
372
A
LYS
355
A
ALA
376
A
ALA
359
A
GLU
426
A
GLU
409
A
ALA
434
A
ALA
417
A
THR
412
A
THR
395
A
LEU
420
A
LEU
403
A
LEU
393
A
LEU
376
A
PHE
399
A
PHE
382
binding site for residue CL A 501
A
CL
501
Software
4
binding site for residue EDO A 502
A
EDO
502
Software
4
A
ASP
61
A
ASP
44
4
1_555
A
ARG
63
A
ARG
46
4
1_555
A
ARG
316
A
ARG
299
4
1_555
A
ASN
347
A
ASN
330
4
1_555
A
SER
118
A
SER
101
4
1_555
A
VAL
140
A
VAL
123
4
1_555
A
SER
141
A
SER
124
4
1_555
A
ARG
281
A
ARG
264
4
1_555
4
P 1 21 1