1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
0000-0003-1829-0117
Liu, C.
0000-0001-9061-3828
Yang, Y.
0000-0002-5669-1176
Schatz, D.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
90.00
90.00
90.00
1.00
1.00
1.00
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
O
N
90
N
P
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
C
N
95
R
C
N
96
N
O
N
97
S
C
N
98
N
O
N
99
N
C
N
100
R
C
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
Y
105
N
C
N
106
N
N
Y
107
N
N
Y
108
N
C
Y
109
N
N
Y
110
N
C
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
O
N
126
N
P
N
127
N
O
N
128
N
O
N
129
N
O
N
130
N
C
N
131
R
C
N
132
N
O
N
133
S
C
N
134
N
O
N
135
N
C
N
136
R
C
N
137
N
N
N
138
N
C
N
139
N
O
N
140
N
N
N
141
N
C
N
142
N
N
N
143
N
C
N
144
N
C
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
P
N
161
N
O
N
162
N
O
N
163
N
O
N
164
N
C
N
165
R
C
N
166
N
O
N
167
S
C
N
168
N
O
N
169
N
C
N
170
R
C
Y
171
N
N
Y
172
N
C
Y
173
N
N
Y
174
N
C
N
175
N
C
N
176
N
O
N
177
N
N
N
178
N
C
N
179
N
N
N
180
N
N
Y
181
N
C
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
P
N
198
N
O
N
199
N
O
N
200
N
O
N
201
N
C
N
202
R
C
N
203
N
O
N
204
S
C
N
205
N
O
N
206
N
C
N
207
R
C
N
208
N
N
N
209
N
C
N
210
N
O
N
211
N
N
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
N
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
N
C
N
273
N
C
N
274
N
O
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
N
Y
288
N
C
Y
289
N
C
Y
290
N
N
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
S
C
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
N
C
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
C
N
354
N
N
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
N
376
N
C
N
377
N
S
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
N
394
N
O
N
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
N
C
N
436
N
O
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
N
N
446
S
C
N
447
N
C
N
448
N
O
N
449
R
C
N
450
N
O
N
451
N
C
N
452
N
O
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
N
N
463
S
C
N
464
N
C
N
465
N
O
N
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
N
Y
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
N
476
N
O
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
N
N
490
S
C
N
491
N
C
N
492
N
O
N
493
N
C
Y
494
N
C
Y
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
N
500
N
O
N
501
N
O
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
N
N
514
S
C
N
515
N
C
N
516
N
O
N
517
N
C
N
518
N
C
N
519
N
C
N
520
N
O
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
Y
464
N
doub
Y
465
N
sing
Y
466
N
sing
N
467
N
sing
Y
468
N
doub
Y
469
N
sing
Y
470
N
sing
N
471
N
sing
Y
472
N
sing
Y
473
N
doub
N
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
doub
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
Y
492
N
doub
Y
493
N
sing
Y
494
N
sing
N
495
N
sing
Y
496
N
doub
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
doub
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
UK
Nature
NATUAS
0006
1476-4687
575
540
544
10.1038/s41586-019-1753-7
31723264
Structures of a RAG-like transposase during cut-and-paste transposition.
2019
10.2210/pdb6pqx/pdb
pdb_00006pqx
Initial local fitting was done using UCSF Chimera, then manually adjusted and rebuilt in Coot. Final model was refined using Phenix real-space refinement.
RIGID BODY FIT
REAL
Correlation coefficient
6PQN
1
A
21-501
6PQN
PDB
experimental model
6PQX
6
3997
4.6
FSC 0.143 CUT-OFF
POINT
Solutions were made fresh from concentrated and filtered to avoid microbial contamination.
7.5
20
mM
NH2C(CH2OH)3
Tris
50
mM
KCl
potassium chloride
10
mM
CaCl2
calcium chloride
1
mM
C9H15O6P
Tris(2-carboxyethyl)phosphine
1
PHASE FLIPPING AND AMPLITUDE CORRECTION
1, 2, 3, 4
Hairpin forming complex of HzTransib with nicked TIR substrate DNA
0
RECOMBINANT
COMPLEX
NO
7113
Helicoverpa zea
Sf9
7108
Spodoptera frugiperda
PARTICLE
1
1
SINGLE PARTICLE
8
52.2
Images were collected in movie-mode at 5 frames per second.
SUPER-RESOLUTION
GATAN K2 SUMMIT (4k x 4k)
6PQX
40
1-40
300
COMA FREE
NITROGEN
Preliminary grid screening was performed manually.
FIELD EMISSION GUN
FLOOD BEAM
FEI TITAN KRIOS
BRIGHT FIELD
2.7
2400
1400
130000
FEI TITAN KRIOS AUTOGRID HOLDER
1
GIF Quantum LS
20
6PQX
C2
PARTICLE SELECTION
1
Gautomatch
0.56
IMAGE ACQUISITION
1
SerialEM
MASKING
CTF CORRECTION
1
RELION
3.0
LAYERLINE INDEXING
DIFFRACTION INDEXING
MODEL FITTING
1
UCSF Chimera
1.13
OTHER
MODEL REFINEMENT
1
PHENIX
1.15
INITIAL EULER ASSIGNMENT
1
RELION
3.0
FINAL EULER ASSIGNMENT
1
RELION
3.0
CLASSIFICATION
1
RELION
3.0
RECONSTRUCTION
1
RELION
3.0
0.3
Recombinantly expressed HzTransib transposase was mixed with chemically synthesized TIR substrate DNA. The complex was further purified on size-exclusion chromatography column. The final complex was monodisperse.
NO
NO
NO
YES
296
ETHANE
Blot for 3 seconds before plunging
6PQX
100
FEI VITROBOT MARK IV
56582.734
DNA-mediated transposase
2
man
polymer
4889.177
DNA (5'-D(P*TP*CP*TP*GP*GP*CP*CP*TP*AP*GP*AP*TP*CP*T)-3')
2
syn
polymer
4956.244
DNA (5'-D(P*CP*AP*CP*GP*GP*TP*GP*GP*AP*TP*CP*GP*AP*AP*AP*A)-3')
2
syn
polymer
9792.304
TIR substrate DNA transferred strand
2
syn
polymer
40.078
CALCIUM ION
4
syn
non-polymer
no
no
KPAPSTIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKAFVAVTDSSAKIALQALLDL
TVNRIFETIRSPDAIQNKQLILISKWGFDGASNQSRYKQNIESGQGDSSIFMTSLVPLKLTADGDTVWVNPKPCSPMYCR
PVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMMTMIDGKICTYLSEAKSNAACYLCLAKPTEMSKLDVI
ASKTISSGVYEFGLSTLHARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDDLNLLIDIVKQGSGTTN
DGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQAITSGEIIDVPKFKEYARTTAEKYVELYDWYYMSSTVHKLLIHGGD
IIAENAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNEDILNMLIISSDPLISFTRPKLDAHKRQTYFKETVELL
QLQDQEAPTEFHHHHHH
KPAPSTIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKAFVAVTDSSAKIALQALLDL
TVNRIFETIRSPDAIQNKQLILISKWGFDGASNQSRYKQNIESGQGDSSIFMTSLVPLKLTADGDTVWVNPKPCSPMYCR
PVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMMTMIDGKICTYLSEAKSNAACYLCLAKPTEMSKLDVI
ASKTISSGVYEFGLSTLHARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDDLNLLIDIVKQGSGTTN
DGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQAITSGEIIDVPKFKEYARTTAEKYVELYDWYYMSSTVHKLLIHGGD
IIAENAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNEDILNMLIISSDPLISFTRPKLDAHKRQTYFKETVELL
QLQDQEAPTEFHHHHHH
A,E
polypeptide(L)
no
no
(DG)(DA)(DT)(DC)(DT)(DG)(DG)(DC)(DC)(DT)(DA)(DG)(DA)(DT)(DC)(DT)
GATCTGGCCTAGATCT
B,F
polydeoxyribonucleotide
no
no
(DC)(DA)(DC)(DG)(DG)(DT)(DG)(DG)(DA)(DT)(DC)(DG)(DA)(DA)(DA)(DA)
CACGGTGGATCGAAAA
C,G
polydeoxyribonucleotide
no
no
(DT)(DT)(DT)(DT)(DC)(DG)(DA)(DT)(DC)(DC)(DA)(DC)(DC)(DG)(DT)(DG)(DA)(DG)(DA)(DT)
(DC)(DT)(DA)(DG)(DG)(DC)(DC)(DA)(DG)(DA)(DT)(DC)
TTTTCGATCCACCGTGAGATCTAGGCCAGATC
D,H
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Corn earworm moth
sample
1
497
7113
Helicoverpa zea
Sf9
7108
Spodoptera frugiperda
Biological sequence
-1.480
1
20
B
3
D
30
-0.131
B_DT3:DA30_D
1
3.640
-0.682
-0.118
0.130
-3.183
1
19
B
4
D
29
6.954
B_DC4:DG29_D
2
9.303
-0.177
0.204
0.339
-5.492
B
5
D
28
-20.720
B_DT5:DA28_D
3
-3.221
-0.498
-0.755
1.067
-4.802
1
B
6
D
27
-6.976
B_DG6:DC27_D
4
-4.619
0.255
-0.223
0.600
-1.853
1
19
B
7
D
26
0.685
B_DG7:DC26_D
5
0.121
0.332
-0.348
0.215
5.610
1
19
B
8
D
25
-1.172
B_DC8:DG25_D
6
-2.302
0.796
-0.556
-0.136
8.286
1
19
B
9
D
24
-4.139
B_DC9:DG24_D
7
-4.437
0.816
-0.743
-0.513
8.210
1
20
B
10
D
23
-6.756
B_DT10:DA23_D
8
-15.948
0.226
-0.882
-0.648
-7.944
1
20
B
11
D
22
-10.976
B_DA11:DT22_D
9
-19.366
0.453
-0.559
-0.025
-11.694
B
12
D
21
-17.424
B_DG12:DC21_D
10
-11.398
3.481
-0.806
0.145
-0.501
1
20
B
13
D
20
4.169
B_DA13:DT20_D
11
5.107
-1.019
-0.742
0.114
7.796
1
20
B
14
D
19
-3.048
B_DT14:DA19_D
12
4.415
-0.433
-1.066
-0.091
23.271
1
19
B
15
D
18
-5.820
B_DC15:DG18_D
13
14.566
-0.178
-2.235
-0.291
-32.439
1
20
C
18
D
15
-11.626
C_DA18:DT15_D
14
-13.526
0.380
-1.729
-0.394
-11.165
1
19
C
19
D
14
-0.350
C_DC19:DG14_D
15
1.335
0.150
-0.698
-0.430
-9.251
1
19
C
20
D
13
-2.209
C_DG20:DC13_D
16
3.917
-0.276
-0.859
-0.431
-4.283
1
19
C
21
D
12
-3.137
C_DG21:DC12_D
17
6.336
-0.404
-0.797
-0.358
13.342
1
20
C
22
D
11
-5.388
C_DT22:DA11_D
18
11.504
-0.589
-1.124
-0.298
-13.452
1
19
C
23
D
10
0.889
C_DG23:DC10_D
19
-4.950
-0.220
-0.933
-0.262
-13.965
1
19
C
24
D
9
1.678
C_DG24:DC9_D
20
-1.492
-0.271
-0.939
-0.249
-8.020
1
20
C
25
D
8
7.616
C_DA25:DT8_D
21
4.913
-0.029
-0.796
-0.258
0.335
1
20
C
26
D
7
-1.182
C_DT26:DA7_D
22
0.401
-0.278
-0.466
-0.180
-0.387
1
19
C
27
D
6
-2.511
C_DC27:DG6_D
23
-0.033
0.105
-0.308
-0.031
-1.148
1
19
C
28
D
5
-0.672
C_DG28:DC5_D
24
-11.819
0.096
-0.538
-0.070
9.140
1
20
C
29
D
4
3.341
C_DA29:DT4_D
25
-10.686
0.281
-0.252
-0.002
5.207
1
20
C
30
D
3
-3.335
C_DA30:DT3_D
26
-13.927
0.406
-0.464
-0.170
-1.968
1
20
C
31
D
2
-1.668
C_DA31:DT2_D
27
-7.063
0.421
-0.782
-0.375
5.369
1
20
C
32
D
1
-0.068
C_DA32:DT1_D
28
-1.005
0.341
-0.689
-0.420
-2.191
1
20
F
3
H
30
3.469
F_DT3:DA30_H
29
3.528
0.649
0.598
-0.450
-3.823
1
19
F
4
H
29
10.612
F_DC4:DG29_H
30
9.104
0.687
0.788
-0.621
-6.467
1
20
F
5
H
28
-17.211
F_DT5:DA28_H
31
-2.701
-0.244
0.007
-0.221
-5.829
1
19
F
6
H
27
-3.588
F_DG6:DC27_H
32
-3.625
-0.184
0.497
-0.587
-2.266
1
19
F
7
H
26
4.030
F_DG7:DC26_H
33
1.537
-0.675
0.323
-0.470
5.616
1
19
F
8
H
25
2.106
F_DC8:DG25_H
34
-0.656
-0.384
0.007
-0.218
8.912
1
19
F
9
H
24
-1.058
F_DC9:DG24_H
35
-2.530
-0.154
-0.370
0.101
9.553
1
20
F
10
H
23
-3.700
F_DT10:DA23_H
36
-14.395
-0.296
-0.552
0.263
-3.126
1
20
F
13
H
20
1.876
F_DA13:DT20_H
37
-2.957
0.307
-0.270
-0.171
7.090
1
20
F
14
H
19
-0.191
F_DT14:DA19_H
38
2.182
0.115
-0.572
-0.376
21.378
1
19
F
15
H
18
-3.179
F_DC15:DG18_H
39
12.677
0.000
-1.773
-0.740
-31.928
1
20
G
18
H
15
-8.045
G_DA18:DT15_H
40
-12.492
0.313
-1.322
0.281
-10.613
1
19
G
19
H
14
3.216
G_DC19:DG14_H
41
1.447
0.249
-0.154
0.139
-9.084
1
19
G
20
H
13
1.392
G_DG20:DC13_H
42
3.630
-0.004
-0.261
-0.043
3.322
1
19
G
21
H
12
-6.283
G_DG21:DC12_H
43
-0.873
0.330
0.490
-0.399
12.718
1
20
G
22
H
11
-1.813
G_DT22:DA11_H
44
11.715
-0.043
-0.453
-0.229
-15.891
1
19
G
23
H
10
3.349
G_DG23:DC10_H
45
-3.879
-0.257
-0.177
-0.119
-15.418
1
19
G
24
H
9
4.199
G_DG24:DC9_H
46
0.688
-0.136
-0.183
-0.072
-8.187
1
20
G
25
H
8
10.168
G_DA25:DT8_H
47
7.458
0.193
-0.019
-0.201
0.982
1
20
G
26
H
7
1.499
G_DT26:DA7_H
48
2.705
0.006
0.341
-0.295
1.197
1
19
G
27
H
6
0.269
G_DC27:DG6_H
49
1.639
0.246
0.550
-0.350
2.312
1
19
G
28
H
5
3.050
G_DG28:DC5_H
50
-4.162
-0.224
0.444
-0.395
12.294
1
20
G
29
H
4
3.842
G_DA29:DT4_H
51
-11.145
-0.064
0.560
-0.353
6.527
1
20
G
30
H
3
-0.128
G_DA30:DT3_H
52
-15.045
-0.173
0.373
-0.338
-1.718
1
20
G
31
H
2
1.514
G_DA31:DT2_H
53
-8.716
-0.224
0.036
-0.156
4.605
1
20
G
32
H
1
3.069
G_DA32:DT1_H
54
-2.641
-0.146
0.151
0.153
5.623
24.105
B
B
3
4
-5.995
D
D
30
29
6.131
-2.487
0.855
2.361
BB_DT3DC4:DG29DA30_DD
1
-4.166
10.043
23.619
7.098
-4.468
3.005
27.520
B
B
4
5
15.907
D
D
29
28
3.555
7.441
-2.684
0.255
BB_DC4DT5:DA28DG29_DD
2
4.592
-9.817
26.119
-1.342
6.801
3.328
30.247
B
B
5
6
14.822
D
D
28
27
3.474
7.652
0.111
-0.119
BB_DT5DG6:DC27DA28_DD
3
-1.280
2.479
29.258
-1.868
-0.486
3.139
35.359
B
B
6
7
4.373
D
D
27
26
3.135
2.653
0.107
0.192
BB_DG6DG7:DC26DC27_DD
4
-0.467
0.770
35.260
-0.059
-0.242
2.858
30.624
B
B
7
8
12.104
D
D
26
25
3.003
6.345
-0.233
-0.316
BB_DG7DC8:DG25DC26_DD
5
1.825
-3.481
29.920
-1.734
0.769
3.231
31.683
B
B
8
9
11.110
D
D
25
24
3.154
5.977
1.153
-0.255
BB_DC8DC9:DG24DG25_DD
6
7.350
-13.662
30.268
-1.568
-0.757
3.015
25.981
B
B
9
10
2.001
D
D
24
23
3.030
0.899
0.000
-0.161
BB_DC9DT10:DA23DG24_DD
7
1.941
-4.321
25.894
-0.588
0.495
3.298
46.107
B
B
10
11
2.399
D
D
23
22
3.210
1.878
0.661
1.978
BB_DT10DA11:DT22DA23_DD
8
1.188
-1.517
46.057
2.366
-0.743
3.280
42.307
B
B
11
12
4.446
D
D
22
21
3.250
3.206
-0.082
0.594
BB_DA11DG12:DC21DT22_DD
9
1.374
-1.905
42.169
0.496
0.255
2.326
21.915
B
B
12
13
3.887
D
D
21
20
2.973
1.375
0.099
0.445
BB_DG12DA13:DT20DC21_DD
10
-13.378
37.826
17.344
0.688
-4.970
2.947
34.686
B
B
13
14
5.520
D
D
20
19
3.080
3.286
-0.796
-1.282
BB_DA13DT14:DA19DT20_DD
11
0.106
-0.178
34.534
-2.616
1.350
3.658
23.979
B
B
14
15
21.068
D
D
19
18
3.618
8.561
-1.902
0.504
BB_DT14DC15:DG18DA19_DD
12
-1.286
3.164
22.383
-1.979
4.099
2.115
22.131
C
C
18
19
5.705
D
D
15
14
2.563
2.083
0.332
0.983
CC_DA18DC19:DG14DT15_DD
13
-11.385
31.176
18.895
1.949
-4.212
3.308
36.412
C
C
19
20
9.225
D
D
14
13
3.185
5.736
-0.128
1.054
CC_DC19DG20:DC13DG14_DD
14
-2.964
4.767
35.854
0.890
-0.207
2.841
30.784
C
C
20
21
8.706
D
D
13
12
3.021
4.605
1.804
-0.898
CC_DG20DG21:DC12DC13_DD
15
-0.288
0.544
30.444
-2.502
-3.448
2.550
27.565
C
C
21
22
9.316
D
D
12
11
2.930
4.405
-1.184
-0.914
CC_DG21DT22:DA11DC12_DD
16
4.034
-8.532
26.922
-2.830
3.320
5.247
45.535
C
C
22
23
58.201
D
D
11
10
5.415
38.355
-0.339
2.735
CC_DT22DG23:DC10DA11_DD
17
3.327
-5.048
24.792
-3.811
1.076
3.548
34.928
C
C
23
24
0.640
D
D
10
9
3.506
0.384
-0.592
0.689
CC_DG23DG24:DC9DC10_DD
18
-2.746
4.579
34.821
1.085
0.538
3.098
36.665
C
C
24
25
9.602
D
D
9
8
3.001
6.008
-0.146
0.845
CC_DG24DA25:DT8DC9_DD
19
-3.083
4.927
36.059
0.570
-0.165
2.734
27.307
C
C
25
26
14.396
D
D
8
7
3.022
6.720
-0.072
-0.796
CC_DA25DT26:DA7DT8_DD
20
-2.514
5.386
26.365
-3.184
-0.409
3.083
38.390
C
C
26
27
12.074
D
D
7
6
3.184
7.885
-0.366
-0.089
CC_DT26DC27:DG6DA7_DD
21
1.795
-2.749
37.560
-1.088
0.774
2.984
29.827
C
C
27
28
24.340
D
D
6
5
3.160
12.177
0.749
0.181
CC_DC27DG28:DC5DG6_DD
22
0.705
-1.410
27.271
-2.144
-1.310
2.879
32.401
C
C
28
29
-1.206
D
D
5
4
2.898
-0.673
0.153
0.401
CC_DG28DA29:DT4DC5_DD
23
-1.572
2.819
32.358
0.823
-0.519
3.257
33.688
C
C
29
30
4.333
D
D
4
3
3.256
2.509
-0.404
0.154
CC_DA29DA30:DT3DT4_DD
24
0.066
-0.113
33.597
-0.140
0.708
3.271
39.759
C
C
30
31
1.181
D
D
3
2
3.277
0.803
-0.094
-0.294
CC_DA30DA31:DT2DT3_DD
25
0.125
-0.184
39.751
-0.526
0.153
3.069
33.460
C
C
31
32
1.696
D
D
2
1
3.114
0.976
0.445
-0.605
CC_DA31DA32:DT1DT2_DD
26
-1.755
3.049
33.402
-1.204
-1.046
5.622
24.093
F
F
3
4
-5.977
H
H
30
29
6.134
-2.478
0.860
2.356
FF_DT3DC4:DG29DA30_HH
27
-4.224
10.189
23.597
7.086
-4.518
2.985
27.540
F
F
4
5
15.576
H
H
29
28
3.555
7.292
-2.696
0.243
FF_DC4DT5:DA28DG29_HH
28
4.761
-10.169
26.153
-1.323
6.860
3.330
30.253
F
F
5
6
14.917
H
H
28
27
3.474
7.701
0.126
-0.111
FF_DT5DG6:DC27DA28_HH
29
-1.201
2.325
29.255
-1.862
-0.499
3.139
35.355
F
F
6
7
4.493
H
H
27
26
3.136
2.726
0.111
0.190
FF_DG6DG7:DC26DC27_HH
30
-0.504
0.830
35.250
-0.073
-0.255
2.853
30.627
F
F
7
8
12.321
H
H
26
25
3.001
6.457
-0.236
-0.310
FF_DG7DC8:DG25DC26_HH
31
1.846
-3.523
29.898
-1.743
0.778
3.229
31.672
F
F
8
9
11.203
H
H
25
24
3.155
6.025
1.142
-0.250
FF_DC8DC9:DG24DG25_HH
32
7.308
-13.588
30.258
-1.569
-0.745
3.016
25.952
F
F
9
10
2.125
H
H
24
23
3.034
0.953
-0.010
-0.158
FF_DC9DT10:DA23DG24_HH
33
2.037
-4.541
25.856
-0.596
0.542
3.082
32.033
F
F
13
14
1.882
H
H
20
19
3.092
1.038
-0.644
-1.486
FF_DA13DT14:DA19DT20_HH
34
-2.375
4.308
31.930
-2.869
0.762
3.660
24.079
F
F
14
15
21.365
H
H
19
18
3.613
8.710
-1.898
0.494
FF_DT14DC15:DG18DA19_HH
35
-1.495
3.668
22.421
-2.038
3.998
2.106
22.231
G
G
18
19
6.629
H
H
15
14
2.560
2.429
0.354
0.981
GG_DA18DC19:DG14DT15_HH
36
-11.492
31.363
18.908
1.836
-4.264
3.307
36.423
G
G
19
20
9.265
H
H
14
13
3.184
5.763
-0.118
1.048
GG_DC19DG20:DC13DG14_HH
37
-2.910
4.678
35.865
0.876
-0.216
2.233
35.045
G
G
20
21
11.696
H
H
13
12
2.695
6.978
1.515
-0.962
GG_DG20DG21:DC12DC13_HH
38
-4.792
8.033
34.038
-2.400
-3.066
2.716
24.774
G
G
21
22
0.433
H
H
12
11
3.191
0.183
-1.222
-1.148
GG_DG21DT22:DA11DC12_HH
39
7.006
-16.549
23.777
-2.727
4.805
5.260
45.290
G
G
22
23
57.796
H
H
11
10
5.417
37.971
-0.342
2.731
GG_DT22DG23:DC10DA11_HH
40
3.541
-5.389
24.901
-3.785
1.128
3.549
34.938
G
G
23
24
0.699
H
H
10
9
3.508
0.419
-0.580
0.692
GG_DG23DG24:DC9DC10_HH
41
-2.687
4.480
34.835
1.085
0.528
3.095
36.651
G
G
24
25
9.662
H
H
9
8
2.997
6.043
-0.136
0.848
GG_DG24DA25:DT8DC9_HH
42
-3.089
4.939
36.038
0.570
-0.182
2.729
27.285
G
G
25
26
14.554
H
H
8
7
3.023
6.787
-0.066
-0.801
GG_DA25DT26:DA7DT8_HH
43
-2.440
5.232
26.332
-3.213
-0.405
3.081
38.395
G
G
26
27
12.046
H
H
7
6
3.181
7.867
-0.365
-0.085
GG_DT26DC27:DG6DA7_HH
44
1.801
-2.758
37.569
-1.080
0.773
2.997
28.214
G
G
27
28
18.193
H
H
6
5
3.062
8.728
0.933
0.189
GG_DC27DG28:DC5DG6_HH
45
0.721
-1.503
26.847
-1.544
-1.754
2.963
31.504
G
G
28
29
4.400
H
H
5
4
2.938
2.386
0.130
0.408
GG_DG28DA29:DT4DC5_HH
46
0.772
-1.423
31.406
0.350
-0.110
3.287
35.047
G
G
29
30
4.962
H
H
4
3
3.279
2.985
-0.388
0.187
GG_DA29DA30:DT3DT4_HH
47
-0.408
0.678
34.921
-0.140
0.584
3.274
39.774
G
G
30
31
1.200
H
H
3
2
3.280
0.817
-0.094
-0.282
GG_DA30DA31:DT2DT3_HH
48
0.031
-0.045
39.766
-0.509
0.142
3.065
33.497
G
G
31
32
1.903
H
H
2
1
3.114
1.096
0.442
-0.602
GG_DA31DA32:DT1DT2_HH
49
-1.879
3.262
33.428
-1.214
-1.059
citation
citation_author
citation
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
em_3d_fitting_list
pdbx_initial_refinement_model
repository
Initial release
Database references
Database references
Author supporting evidence
Data collection
Database references
Refinement description
1
0
2019-10-09
1
1
2019-11-27
1
2
2019-12-04
1
3
2019-12-18
1
4
2024-03-20
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation_author.identifier_ORCID
_citation.journal_volume
_citation.page_first
_citation.page_last
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_em_3d_fitting_list.accession_code
_em_3d_fitting_list.initial_refinement_model_id
_em_3d_fitting_list.source_name
_em_3d_fitting_list.type
United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
1R01AI137079
20452 contains the same protein complexed with intact TIR substrate DNA
20453 contains the same protein and DNA, but represents a different conformation
Cryo-EM structure of HzTransib/nicked TIR substrate DNA hairpin forming complex (HFC)
N
RCSB
Y
RCSB
2019-07-10
REL
CA
CALCIUM ION
7113
Helicoverpa zea
sample
1
16
7113
Helicoverpa zea
sample
1
16
7113
Helicoverpa zea
sample
1
32
N
6PQN
PDB
experimental model
CA
601
5
CA
CA
601
A
CA
602
5
CA
CA
602
A
CA
601
5
CA
CA
601
E
CA
602
5
CA
CA
602
E
n
1
17
A
n
2
18
A
n
3
19
A
n
4
20
A
SER
21
n
5
SER
21
A
THR
22
n
6
THR
22
A
ILE
23
n
7
ILE
23
A
PHE
24
n
8
PHE
24
A
SER
25
n
9
SER
25
A
PRO
26
n
10
PRO
26
A
GLU
27
n
11
GLU
27
A
LYS
28
n
12
LYS
28
A
ALA
29
n
13
ALA
29
A
LEU
30
n
14
LEU
30
A
GLY
31
n
15
GLY
31
A
LEU
32
n
16
LEU
32
A
LEU
33
n
17
LEU
33
A
LEU
34
n
18
LEU
34
A
SER
35
n
19
SER
35
A
LEU
36
n
20
LEU
36
A
LYS
37
n
21
LYS
37
A
LEU
38
n
22
LEU
38
A
SER
39
n
23
SER
39
A
LYS
40
n
24
LYS
40
A
TRP
41
n
25
TRP
41
A
GLN
42
n
26
GLN
42
A
TYR
43
n
27
TYR
43
A
ILE
44
n
28
ILE
44
A
THR
45
n
29
THR
45
A
LEU
46
n
30
LEU
46
A
ARG
47
n
31
ARG
47
A
GLU
48
n
32
GLU
48
A
THR
49
n
33
THR
49
A
THR
50
n
34
THR
50
A
ILE
51
n
35
ILE
51
A
ARG
52
n
36
ARG
52
A
GLU
53
n
37
GLU
53
A
GLY
54
n
38
GLY
54
A
SER
55
n
39
SER
55
A
LYS
56
n
40
LYS
56
A
GLU
57
n
41
GLU
57
A
ILE
58
n
42
ILE
58
A
TYR
59
n
43
TYR
59
A
PRO
60
n
44
PRO
60
A
SER
61
n
45
SER
61
A
TYR
62
n
46
TYR
62
A
TYR
63
n
47
TYR
63
A
LYS
64
n
48
LYS
64
A
VAL
65
n
49
VAL
65
A
GLN
66
n
50
GLN
66
A
LYS
67
n
51
LYS
67
A
ALA
68
n
52
ALA
68
A
LYS
69
n
53
LYS
69
A
LEU
70
n
54
LEU
70
A
GLN
71
n
55
GLN
71
A
CYS
72
n
56
CYS
72
A
TYR
73
n
57
TYR
73
A
PRO
74
n
58
PRO
74
A
PRO
75
n
59
PRO
75
A
LYS
76
n
60
LYS
76
A
ALA
77
n
61
ALA
77
A
PHE
78
n
62
PHE
78
A
VAL
79
n
63
VAL
79
A
ALA
80
n
64
ALA
80
A
VAL
81
n
65
VAL
81
A
THR
82
n
66
THR
82
A
ASP
83
n
67
ASP
83
A
SER
84
n
68
SER
84
A
SER
85
n
69
SER
85
A
ALA
86
n
70
ALA
86
A
LYS
87
n
71
LYS
87
A
ILE
88
n
72
ILE
88
A
ALA
89
n
73
ALA
89
A
LEU
90
n
74
LEU
90
A
GLN
91
n
75
GLN
91
A
ALA
92
n
76
ALA
92
A
LEU
93
n
77
LEU
93
A
LEU
94
n
78
LEU
94
A
ASP
95
n
79
ASP
95
A
LEU
96
n
80
LEU
96
A
THR
97
n
81
THR
97
A
VAL
98
n
82
VAL
98
A
ASN
99
n
83
ASN
99
A
ARG
100
n
84
ARG
100
A
ILE
101
n
85
ILE
101
A
PHE
102
n
86
PHE
102
A
GLU
103
n
87
GLU
103
A
THR
104
n
88
THR
104
A
ILE
105
n
89
ILE
105
A
ARG
106
n
90
ARG
106
A
SER
107
n
91
SER
107
A
PRO
108
n
92
PRO
108
A
ASP
109
n
93
ASP
109
A
ALA
110
n
94
ALA
110
A
ILE
111
n
95
ILE
111
A
GLN
112
n
96
GLN
112
A
ASN
113
n
97
ASN
113
A
LYS
114
n
98
LYS
114
A
GLN
115
n
99
GLN
115
A
LEU
116
n
100
LEU
116
A
ILE
117
n
101
ILE
117
A
LEU
118
n
102
LEU
118
A
ILE
119
n
103
ILE
119
A
SER
120
n
104
SER
120
A
LYS
121
n
105
LYS
121
A
TRP
122
n
106
TRP
122
A
GLY
123
n
107
GLY
123
A
PHE
124
n
108
PHE
124
A
ASP
125
n
109
ASP
125
A
GLY
126
n
110
GLY
126
A
ALA
127
n
111
ALA
127
A
SER
128
n
112
SER
128
A
ASN
129
n
113
ASN
129
A
GLN
130
n
114
GLN
130
A
SER
131
n
115
SER
131
A
ARG
132
n
116
ARG
132
A
TYR
133
n
117
TYR
133
A
LYS
134
n
118
LYS
134
A
GLN
135
n
119
GLN
135
A
ASN
136
n
120
ASN
136
A
ILE
137
n
121
ILE
137
A
GLU
138
n
122
GLU
138
A
SER
139
n
123
SER
139
A
GLY
140
n
124
GLY
140
A
GLN
141
n
125
GLN
141
A
GLY
142
n
126
GLY
142
A
ASP
143
n
127
ASP
143
A
SER
144
n
128
SER
144
A
SER
145
n
129
SER
145
A
ILE
146
n
130
ILE
146
A
PHE
147
n
131
PHE
147
A
MET
148
n
132
MET
148
A
THR
149
n
133
THR
149
A
SER
150
n
134
SER
150
A
LEU
151
n
135
LEU
151
A
VAL
152
n
136
VAL
152
A
PRO
153
n
137
PRO
153
A
LEU
154
n
138
LEU
154
A
LYS
155
n
139
LYS
155
A
LEU
156
n
140
LEU
156
A
THR
157
n
141
THR
157
A
ALA
158
n
142
ALA
158
A
ASP
159
n
143
ASP
159
A
GLY
160
n
144
GLY
160
A
ASP
161
n
145
ASP
161
A
THR
162
n
146
THR
162
A
VAL
163
n
147
VAL
163
A
TRP
164
n
148
TRP
164
A
VAL
165
n
149
VAL
165
A
ASN
166
n
150
ASN
166
A
PRO
167
n
151
PRO
167
A
LYS
168
n
152
LYS
168
A
PRO
169
n
153
PRO
169
A
CYS
170
n
154
CYS
170
A
SER
171
n
155
SER
171
A
PRO
172
n
156
PRO
172
A
MET
173
n
157
MET
173
A
TYR
174
n
158
TYR
174
A
CYS
175
n
159
CYS
175
A
ARG
176
n
160
ARG
176
A
PRO
177
n
161
PRO
177
A
VAL
178
n
162
VAL
178
A
GLN
179
n
163
GLN
179
A
PHE
180
n
164
PHE
180
A
SER
181
n
165
SER
181
A
PHE
182
n
166
PHE
182
A
VAL
183
n
167
VAL
183
A
LYS
184
n
168
LYS
184
A
GLU
185
n
169
GLU
185
A
THR
186
n
170
THR
186
A
LYS
187
n
171
LYS
187
A
ASP
188
n
172
ASP
188
A
VAL
189
n
173
VAL
189
A
VAL
190
n
174
VAL
190
A
ILE
191
n
175
ILE
191
A
ASN
192
n
176
ASN
192
A
GLU
193
n
177
GLU
193
A
LYS
194
n
178
LYS
194
A
THR
195
n
179
THR
195
A
ALA
196
n
180
ALA
196
A
MET
197
n
181
MET
197
A
ASP
198
n
182
ASP
198
A
ASP
199
n
183
ASP
199
A
GLU
200
n
184
GLU
200
A
ILE
201
n
185
ILE
201
A
GLU
202
n
186
GLU
202
A
ALA
203
n
187
ALA
203
A
LEU
204
n
188
LEU
204
A
VAL
205
n
189
VAL
205
A
PRO
206
n
190
PRO
206
A
SER
207
n
191
SER
207
A
LYS
208
n
192
LYS
208
A
CYS
209
n
193
CYS
209
A
GLN
210
n
194
GLN
210
A
GLY
211
n
195
GLY
211
A
HIS
212
n
196
HIS
212
A
GLU
213
n
197
GLU
213
A
ILE
214
n
198
ILE
214
A
SER
215
n
199
SER
215
A
HIS
216
n
200
HIS
216
A
LYS
217
n
201
LYS
217
A
LEU
218
n
202
LEU
218
A
MET
219
n
203
MET
219
A
MET
220
n
204
MET
220
A
THR
221
n
205
THR
221
A
MET
222
n
206
MET
222
A
ILE
223
n
207
ILE
223
A
ASP
224
n
208
ASP
224
A
GLY
225
n
209
GLY
225
A
LYS
226
n
210
LYS
226
A
ILE
227
n
211
ILE
227
A
CYS
228
n
212
CYS
228
A
THR
229
n
213
THR
229
A
TYR
230
n
214
TYR
230
A
LEU
231
n
215
LEU
231
A
SER
232
n
216
SER
232
A
GLU
233
n
217
GLU
233
A
ALA
234
n
218
ALA
234
A
LYS
235
n
219
LYS
235
A
SER
236
n
220
SER
236
A
ASN
237
n
221
ASN
237
A
ALA
238
n
222
ALA
238
A
ALA
239
n
223
ALA
239
A
CYS
240
n
224
CYS
240
A
TYR
241
n
225
TYR
241
A
LEU
242
n
226
LEU
242
A
CYS
243
n
227
CYS
243
A
LEU
244
n
228
LEU
244
A
ALA
245
n
229
ALA
245
A
LYS
246
n
230
LYS
246
A
PRO
247
n
231
PRO
247
A
THR
248
n
232
THR
248
A
GLU
249
n
233
GLU
249
A
MET
250
n
234
MET
250
A
SER
251
n
235
SER
251
A
LYS
252
n
236
LYS
252
A
LEU
253
n
237
LEU
253
A
ASP
254
n
238
ASP
254
A
VAL
255
n
239
VAL
255
A
ILE
256
n
240
ILE
256
A
ALA
257
n
241
ALA
257
A
SER
258
n
242
SER
258
A
LYS
259
n
243
LYS
259
A
THR
260
n
244
THR
260
A
ILE
261
n
245
ILE
261
A
SER
262
n
246
SER
262
A
SER
263
n
247
SER
263
A
GLY
264
n
248
GLY
264
A
VAL
265
n
249
VAL
265
A
TYR
266
n
250
TYR
266
A
GLU
267
n
251
GLU
267
A
PHE
268
n
252
PHE
268
A
GLY
269
n
253
GLY
269
A
LEU
270
n
254
LEU
270
A
SER
271
n
255
SER
271
A
THR
272
n
256
THR
272
A
LEU
273
n
257
LEU
273
A
HIS
274
n
258
HIS
274
A
ALA
275
n
259
ALA
275
A
ARG
276
n
260
ARG
276
A
ILE
277
n
261
ILE
277
A
ASN
278
n
262
ASN
278
A
VAL
279
n
263
VAL
279
A
MET
280
n
264
MET
280
A
GLU
281
n
265
GLU
281
A
CYS
282
n
266
CYS
282
A
LEU
283
n
267
LEU
283
A
LEU
284
n
268
LEU
284
A
HIS
285
n
269
HIS
285
A
ILE
286
n
270
ILE
286
A
ALA
287
n
271
ALA
287
A
TYR
288
n
272
TYR
288
A
ARG
289
n
273
ARG
289
A
LEU
290
n
274
LEU
290
A
ASP
291
n
275
ASP
291
A
PHE
292
n
276
PHE
292
A
LYS
293
n
277
LYS
293
A
LYS
294
n
278
LYS
294
A
TRP
295
n
279
TRP
295
A
SER
296
n
280
SER
296
A
ALA
297
n
281
ALA
297
A
ARG
298
n
282
ARG
298
A
GLY
299
n
283
GLY
299
A
ALA
300
n
284
GLU
300
A
GLY
301
n
285
GLY
301
A
HIS
302
n
286
HIS
302
A
GLN
303
n
287
GLN
303
A
GLU
304
n
288
GLU
304
A
LEU
305
n
289
LEU
305
A
LEU
306
n
290
LEU
306
A
HIS
307
n
291
HIS
307
A
SER
308
n
292
SER
308
A
ARG
309
n
293
ARG
309
A
LYS
310
n
294
LYS
310
A
LYS
311
n
295
LYS
311
A
LEU
312
n
296
LEU
312
A
ILE
313
n
297
ILE
313
A
GLN
314
n
298
GLN
314
A
ASP
315
n
299
ASP
315
A
ARG
316
n
300
ARG
316
A
PHE
317
n
301
PHE
317
A
LYS
318
n
302
LYS
318
A
ASP
319
n
303
ASP
319
A
ASP
320
n
304
ASP
320
A
LEU
321
n
305
LEU
321
A
ASN
322
n
306
ASN
322
A
LEU
323
n
307
LEU
323
A
LEU
324
n
308
LEU
324
A
ILE
325
n
309
ILE
325
A
ASP
326
n
310
ASP
326
A
ILE
327
n
311
ILE
327
A
VAL
328
n
312
VAL
328
A
LYS
329
n
313
LYS
329
A
GLN
330
n
314
GLN
330
A
GLY
331
n
315
GLY
331
A
SER
332
n
316
SER
332
A
GLY
333
n
317
GLY
333
A
THR
334
n
318
THR
334
A
THR
335
n
319
THR
335
A
ASN
336
n
320
ASN
336
A
ASP
337
n
321
ASP
337
A
GLY
338
n
322
GLY
338
A
ASN
339
n
323
ASN
339
A
THR
340
n
324
THR
340
A
ALA
341
n
325
ALA
341
A
ARG
342
n
326
ARG
342
A
ARG
343
n
327
ARG
343
A
PHE
344
n
328
PHE
344
A
PHE
345
n
329
PHE
345
A
GLU
346
n
330
GLU
346
A
PHE
347
n
331
PHE
347
A
PRO
348
n
332
PRO
348
A
ASP
349
n
333
ASP
349
A
LYS
350
n
334
LYS
350
A
THR
351
n
335
THR
351
A
ALA
352
n
336
ALA
352
A
ALA
353
n
337
ALA
353
A
ILE
354
n
338
ILE
354
A
THR
355
n
339
THR
355
A
GLY
356
n
340
GLY
356
A
LEU
357
n
341
LEU
357
A
ASP
358
n
342
ASP
358
A
GLU
359
n
343
GLU
359
A
ASP
360
n
344
ASP
360
A
LEU
361
n
345
LEU
361
A
ILE
362
n
346
ILE
362
A
ARG
363
n
347
ARG
363
A
ARG
364
n
348
ARG
364
A
PHE
365
n
349
PHE
365
A
SER
366
n
350
SER
366
A
VAL
367
n
351
VAL
367
A
ILE
368
n
352
ILE
368
A
LEU
369
n
353
LEU
369
A
GLN
370
n
354
GLN
370
A
ALA
371
n
355
ALA
371
A
ILE
372
n
356
ILE
372
A
THR
373
n
357
THR
373
A
SER
374
n
358
SER
374
A
GLY
375
n
359
GLY
375
A
GLU
376
n
360
GLU
376
A
ILE
377
n
361
ILE
377
A
ILE
378
n
362
ILE
378
A
ASP
379
n
363
ASP
379
A
VAL
380
n
364
VAL
380
A
PRO
381
n
365
PRO
381
A
LYS
382
n
366
LYS
382
A
PHE
383
n
367
PHE
383
A
LYS
384
n
368
LYS
384
A
GLU
385
n
369
GLU
385
A
TYR
386
n
370
TYR
386
A
ALA
387
n
371
ALA
387
A
ARG
388
n
372
ARG
388
A
THR
389
n
373
THR
389
A
THR
390
n
374
THR
390
A
ALA
391
n
375
ALA
391
A
GLU
392
n
376
GLU
392
A
LYS
393
n
377
LYS
393
A
TYR
394
n
378
TYR
394
A
VAL
395
n
379
VAL
395
A
GLU
396
n
380
GLU
396
A
LEU
397
n
381
LEU
397
A
TYR
398
n
382
TYR
398
A
ASP
399
n
383
ASP
399
A
TRP
400
n
384
TRP
400
A
TYR
401
n
385
TYR
401
A
TYR
402
n
386
TYR
402
A
MET
403
n
387
MET
403
A
SER
404
n
388
SER
404
A
SER
405
n
389
SER
405
A
THR
406
n
390
THR
406
A
VAL
407
n
391
VAL
407
A
HIS
408
n
392
HIS
408
A
LYS
409
n
393
LYS
409
A
LEU
410
n
394
LEU
410
A
LEU
411
n
395
LEU
411
A
ILE
412
n
396
ILE
412
A
HIS
413
n
397
HIS
413
A
GLY
414
n
398
GLY
414
A
GLY
415
n
399
GLY
415
A
ASP
416
n
400
ASP
416
A
ILE
417
n
401
ILE
417
A
ILE
418
n
402
ILE
418
A
ALA
419
n
403
ALA
419
A
GLU
420
n
404
GLU
420
A
ASN
421
n
405
ASN
421
A
ALA
422
n
406
ALA
422
A
ILE
423
n
407
ILE
423
A
VAL
424
n
408
VAL
424
A
PRO
425
n
409
PRO
425
A
ILE
426
n
410
ILE
426
A
GLY
427
n
411
GLY
427
A
SER
428
n
412
SER
428
A
LEU
429
n
413
LEU
429
A
SER
430
n
414
SER
430
A
GLU
431
n
415
GLU
431
A
GLU
432
n
416
GLU
432
A
ALA
433
n
417
ALA
433
A
SER
434
n
418
SER
434
A
GLU
435
n
419
GLU
435
A
ALA
436
n
420
ALA
436
A
ARG
437
n
421
ARG
437
A
ASN
438
n
422
ASN
438
A
LYS
439
n
423
LYS
439
A
ASP
440
n
424
ASP
440
A
PHE
441
n
425
PHE
441
A
ARG
442
n
426
ARG
442
A
ARG
443
n
427
ARG
443
A
PHE
444
n
428
PHE
444
A
ARG
445
n
429
ARG
445
A
GLU
446
n
430
GLU
446
A
HIS
447
n
431
HIS
447
A
HIS
448
n
432
HIS
448
A
SER
449
n
433
SER
449
A
ARG
450
n
434
ARG
450
A
LYS
451
n
435
LYS
451
A
LYS
452
n
436
LYS
452
A
SER
453
n
437
SER
453
A
ARG
454
n
438
ARG
454
A
GLN
455
n
439
GLN
455
A
ALA
456
n
440
ALA
456
A
SER
457
n
441
SER
457
A
ASN
458
n
442
ASN
458
A
GLU
459
n
443
GLU
459
A
ASP
460
n
444
ASP
460
A
ILE
461
n
445
ILE
461
A
LEU
462
n
446
LEU
462
A
ASN
463
n
447
ASN
463
A
MET
464
n
448
MET
464
A
LEU
465
n
449
LEU
465
A
ILE
466
n
450
ILE
466
A
ILE
467
n
451
ILE
467
A
SER
468
n
452
SER
468
A
SER
469
n
453
SER
469
A
ASP
470
n
454
ASP
470
A
PRO
471
n
455
PRO
471
A
LEU
472
n
456
LEU
472
A
ILE
473
n
457
ILE
473
A
SER
474
n
458
SER
474
A
PHE
475
n
459
PHE
475
A
THR
476
n
460
THR
476
A
ARG
477
n
461
ARG
477
A
PRO
478
n
462
PRO
478
A
LYS
479
n
463
LYS
479
A
LEU
480
n
464
LEU
480
A
ASP
481
n
465
ASP
481
A
ALA
482
n
466
ALA
482
A
HIS
483
n
467
HIS
483
A
LYS
484
n
468
LYS
484
A
ARG
485
n
469
ARG
485
A
GLN
486
n
470
GLN
486
A
THR
487
n
471
THR
487
A
TYR
488
n
472
TYR
488
A
PHE
489
n
473
PHE
489
A
LYS
490
n
474
LYS
490
A
GLU
491
n
475
GLU
491
A
THR
492
n
476
THR
492
A
VAL
493
n
477
VAL
493
A
GLU
494
n
478
GLU
494
A
LEU
495
n
479
LEU
495
A
LEU
496
n
480
LEU
496
A
GLN
497
n
481
GLN
497
A
LEU
498
n
482
LEU
498
A
GLN
499
n
483
GLN
499
A
ASP
500
n
484
ASP
500
A
n
485
501
A
n
486
502
A
n
487
503
A
n
488
504
A
n
489
505
A
n
490
506
A
n
491
507
A
n
492
508
A
n
493
509
A
n
494
510
A
n
495
511
A
n
496
512
A
n
497
513
A
n
1
1
B
n
2
2
B
DT
3
n
3
DT
3
B
DC
4
n
4
DC
4
B
DT
5
n
5
DT
5
B
DG
6
n
6
DG
6
B
DG
7
n
7
DG
7
B
DC
8
n
8
DC
8
B
DC
9
n
9
DC
9
B
DT
10
n
10
DT
10
B
DA
11
n
11
DA
11
B
DG
12
n
12
DG
12
B
DA
13
n
13
DA
13
B
DT
14
n
14
DT
14
B
DC
15
n
15
DC
15
B
DT
16
n
16
DT
16
B
DC
17
n
1
DC
17
C
DA
18
n
2
DA
18
C
DC
19
n
3
DC
19
C
DG
20
n
4
DG
20
C
DG
21
n
5
DG
21
C
DT
22
n
6
DT
22
C
DG
23
n
7
DG
23
C
DG
24
n
8
DG
24
C
DA
25
n
9
DA
25
C
DT
26
n
10
DT
26
C
DC
27
n
11
DC
27
C
DG
28
n
12
DG
28
C
DA
29
n
13
DA
29
C
DA
30
n
14
DA
30
C
DA
31
n
15
DA
31
C
DA
32
n
16
DA
32
C
DT
1
n
1
DT
1
D
DT
2
n
2
DT
2
D
DT
3
n
3
DT
3
D
DT
4
n
4
DT
4
D
DC
5
n
5
DC
5
D
DG
6
n
6
DG
6
D
DA
7
n
7
DA
7
D
DT
8
n
8
DT
8
D
DC
9
n
9
DC
9
D
DC
10
n
10
DC
10
D
DA
11
n
11
DA
11
D
DC
12
n
12
DC
12
D
DC
13
n
13
DC
13
D
DG
14
n
14
DG
14
D
DT
15
n
15
DT
15
D
DG
16
n
16
DG
16
D
DA
17
n
17
DA
17
D
DG
18
n
18
DG
18
D
DA
19
n
19
DA
19
D
DT
20
n
20
DT
20
D
DC
21
n
21
DC
21
D
DT
22
n
22
DT
22
D
DA
23
n
23
DA
23
D
DG
24
n
24
DG
24
D
DG
25
n
25
DG
25
D
DC
26
n
26
DC
26
D
DC
27
n
27
DC
27
D
DA
28
n
28
DA
28
D
DG
29
n
29
DG
29
D
DA
30
n
30
DA
30
D
n
31
31
D
n
32
32
D
n
1
17
E
n
2
18
E
n
3
19
E
n
4
20
E
SER
21
n
5
SER
21
E
THR
22
n
6
THR
22
E
ILE
23
n
7
ILE
23
E
PHE
24
n
8
PHE
24
E
SER
25
n
9
SER
25
E
PRO
26
n
10
PRO
26
E
GLU
27
n
11
GLU
27
E
LYS
28
n
12
LYS
28
E
ALA
29
n
13
ALA
29
E
LEU
30
n
14
LEU
30
E
GLY
31
n
15
GLY
31
E
LEU
32
n
16
LEU
32
E
LEU
33
n
17
LEU
33
E
LEU
34
n
18
LEU
34
E
SER
35
n
19
SER
35
E
LEU
36
n
20
LEU
36
E
LYS
37
n
21
LYS
37
E
LEU
38
n
22
LEU
38
E
SER
39
n
23
SER
39
E
LYS
40
n
24
LYS
40
E
TRP
41
n
25
TRP
41
E
GLN
42
n
26
GLN
42
E
TYR
43
n
27
TYR
43
E
ILE
44
n
28
ILE
44
E
THR
45
n
29
THR
45
E
LEU
46
n
30
LEU
46
E
ARG
47
n
31
ARG
47
E
GLU
48
n
32
GLU
48
E
THR
49
n
33
THR
49
E
THR
50
n
34
THR
50
E
ILE
51
n
35
ILE
51
E
ARG
52
n
36
ARG
52
E
GLU
53
n
37
GLU
53
E
GLY
54
n
38
GLY
54
E
SER
55
n
39
SER
55
E
LYS
56
n
40
LYS
56
E
GLU
57
n
41
GLU
57
E
ILE
58
n
42
ILE
58
E
TYR
59
n
43
TYR
59
E
PRO
60
n
44
PRO
60
E
SER
61
n
45
SER
61
E
TYR
62
n
46
TYR
62
E
TYR
63
n
47
TYR
63
E
LYS
64
n
48
LYS
64
E
VAL
65
n
49
VAL
65
E
GLN
66
n
50
GLN
66
E
LYS
67
n
51
LYS
67
E
ALA
68
n
52
ALA
68
E
LYS
69
n
53
LYS
69
E
LEU
70
n
54
LEU
70
E
GLN
71
n
55
GLN
71
E
CYS
72
n
56
CYS
72
E
TYR
73
n
57
TYR
73
E
PRO
74
n
58
PRO
74
E
PRO
75
n
59
PRO
75
E
LYS
76
n
60
LYS
76
E
ALA
77
n
61
ALA
77
E
PHE
78
n
62
PHE
78
E
VAL
79
n
63
VAL
79
E
ALA
80
n
64
ALA
80
E
VAL
81
n
65
VAL
81
E
THR
82
n
66
THR
82
E
ASP
83
n
67
ASP
83
E
SER
84
n
68
SER
84
E
SER
85
n
69
SER
85
E
ALA
86
n
70
ALA
86
E
LYS
87
n
71
LYS
87
E
ILE
88
n
72
ILE
88
E
ALA
89
n
73
ALA
89
E
LEU
90
n
74
LEU
90
E
GLN
91
n
75
GLN
91
E
ALA
92
n
76
ALA
92
E
LEU
93
n
77
LEU
93
E
LEU
94
n
78
LEU
94
E
ASP
95
n
79
ASP
95
E
LEU
96
n
80
LEU
96
E
THR
97
n
81
THR
97
E
VAL
98
n
82
VAL
98
E
ASN
99
n
83
ASN
99
E
ARG
100
n
84
ARG
100
E
ILE
101
n
85
ILE
101
E
PHE
102
n
86
PHE
102
E
GLU
103
n
87
GLU
103
E
THR
104
n
88
THR
104
E
ILE
105
n
89
ILE
105
E
ARG
106
n
90
ARG
106
E
SER
107
n
91
SER
107
E
PRO
108
n
92
PRO
108
E
ASP
109
n
93
ASP
109
E
ALA
110
n
94
ALA
110
E
ILE
111
n
95
ILE
111
E
GLN
112
n
96
GLN
112
E
ASN
113
n
97
ASN
113
E
LYS
114
n
98
LYS
114
E
GLN
115
n
99
GLN
115
E
LEU
116
n
100
LEU
116
E
ILE
117
n
101
ILE
117
E
LEU
118
n
102
LEU
118
E
ILE
119
n
103
ILE
119
E
SER
120
n
104
SER
120
E
LYS
121
n
105
LYS
121
E
TRP
122
n
106
TRP
122
E
GLY
123
n
107
GLY
123
E
PHE
124
n
108
PHE
124
E
ASP
125
n
109
ASP
125
E
GLY
126
n
110
GLY
126
E
ALA
127
n
111
ALA
127
E
SER
128
n
112
SER
128
E
ASN
129
n
113
ASN
129
E
GLN
130
n
114
GLN
130
E
SER
131
n
115
SER
131
E
ARG
132
n
116
ARG
132
E
TYR
133
n
117
TYR
133
E
LYS
134
n
118
LYS
134
E
GLN
135
n
119
GLN
135
E
ASN
136
n
120
ASN
136
E
ILE
137
n
121
ILE
137
E
GLU
138
n
122
GLU
138
E
SER
139
n
123
SER
139
E
GLY
140
n
124
GLY
140
E
GLN
141
n
125
GLN
141
E
GLY
142
n
126
GLY
142
E
ASP
143
n
127
ASP
143
E
SER
144
n
128
SER
144
E
SER
145
n
129
SER
145
E
ILE
146
n
130
ILE
146
E
PHE
147
n
131
PHE
147
E
MET
148
n
132
MET
148
E
THR
149
n
133
THR
149
E
SER
150
n
134
SER
150
E
LEU
151
n
135
LEU
151
E
VAL
152
n
136
VAL
152
E
PRO
153
n
137
PRO
153
E
LEU
154
n
138
LEU
154
E
LYS
155
n
139
LYS
155
E
LEU
156
n
140
LEU
156
E
THR
157
n
141
THR
157
E
ALA
158
n
142
ALA
158
E
ASP
159
n
143
ASP
159
E
GLY
160
n
144
GLY
160
E
ASP
161
n
145
ASP
161
E
THR
162
n
146
THR
162
E
VAL
163
n
147
VAL
163
E
TRP
164
n
148
TRP
164
E
VAL
165
n
149
VAL
165
E
ASN
166
n
150
ASN
166
E
PRO
167
n
151
PRO
167
E
LYS
168
n
152
LYS
168
E
PRO
169
n
153
PRO
169
E
CYS
170
n
154
CYS
170
E
SER
171
n
155
SER
171
E
PRO
172
n
156
PRO
172
E
MET
173
n
157
MET
173
E
TYR
174
n
158
TYR
174
E
CYS
175
n
159
CYS
175
E
ARG
176
n
160
ARG
176
E
PRO
177
n
161
PRO
177
E
VAL
178
n
162
VAL
178
E
GLN
179
n
163
GLN
179
E
PHE
180
n
164
PHE
180
E
SER
181
n
165
SER
181
E
PHE
182
n
166
PHE
182
E
VAL
183
n
167
VAL
183
E
LYS
184
n
168
LYS
184
E
GLU
185
n
169
GLU
185
E
THR
186
n
170
THR
186
E
LYS
187
n
171
LYS
187
E
ASP
188
n
172
ASP
188
E
VAL
189
n
173
VAL
189
E
VAL
190
n
174
VAL
190
E
ILE
191
n
175
ILE
191
E
ASN
192
n
176
ASN
192
E
GLU
193
n
177
GLU
193
E
LYS
194
n
178
LYS
194
E
THR
195
n
179
THR
195
E
ALA
196
n
180
ALA
196
E
MET
197
n
181
MET
197
E
ASP
198
n
182
ASP
198
E
ASP
199
n
183
ASP
199
E
GLU
200
n
184
GLU
200
E
ILE
201
n
185
ILE
201
E
GLU
202
n
186
GLU
202
E
ALA
203
n
187
ALA
203
E
LEU
204
n
188
LEU
204
E
VAL
205
n
189
VAL
205
E
PRO
206
n
190
PRO
206
E
SER
207
n
191
SER
207
E
LYS
208
n
192
LYS
208
E
CYS
209
n
193
CYS
209
E
GLN
210
n
194
GLN
210
E
GLY
211
n
195
GLY
211
E
HIS
212
n
196
HIS
212
E
GLU
213
n
197
GLU
213
E
ILE
214
n
198
ILE
214
E
SER
215
n
199
SER
215
E
HIS
216
n
200
HIS
216
E
LYS
217
n
201
LYS
217
E
LEU
218
n
202
LEU
218
E
MET
219
n
203
MET
219
E
MET
220
n
204
MET
220
E
THR
221
n
205
THR
221
E
MET
222
n
206
MET
222
E
ILE
223
n
207
ILE
223
E
ASP
224
n
208
ASP
224
E
GLY
225
n
209
GLY
225
E
LYS
226
n
210
LYS
226
E
ILE
227
n
211
ILE
227
E
CYS
228
n
212
CYS
228
E
THR
229
n
213
THR
229
E
TYR
230
n
214
TYR
230
E
LEU
231
n
215
LEU
231
E
SER
232
n
216
SER
232
E
GLU
233
n
217
GLU
233
E
ALA
234
n
218
ALA
234
E
LYS
235
n
219
LYS
235
E
SER
236
n
220
SER
236
E
ASN
237
n
221
ASN
237
E
ALA
238
n
222
ALA
238
E
ALA
239
n
223
ALA
239
E
CYS
240
n
224
CYS
240
E
TYR
241
n
225
TYR
241
E
LEU
242
n
226
LEU
242
E
CYS
243
n
227
CYS
243
E
LEU
244
n
228
LEU
244
E
ALA
245
n
229
ALA
245
E
LYS
246
n
230
LYS
246
E
PRO
247
n
231
PRO
247
E
THR
248
n
232
THR
248
E
GLU
249
n
233
GLU
249
E
MET
250
n
234
MET
250
E
SER
251
n
235
SER
251
E
LYS
252
n
236
LYS
252
E
LEU
253
n
237
LEU
253
E
ASP
254
n
238
ASP
254
E
VAL
255
n
239
VAL
255
E
ILE
256
n
240
ILE
256
E
ALA
257
n
241
ALA
257
E
SER
258
n
242
SER
258
E
LYS
259
n
243
LYS
259
E
THR
260
n
244
THR
260
E
ILE
261
n
245
ILE
261
E
SER
262
n
246
SER
262
E
SER
263
n
247
SER
263
E
GLY
264
n
248
GLY
264
E
VAL
265
n
249
VAL
265
E
TYR
266
n
250
TYR
266
E
GLU
267
n
251
GLU
267
E
PHE
268
n
252
PHE
268
E
GLY
269
n
253
GLY
269
E
LEU
270
n
254
LEU
270
E
SER
271
n
255
SER
271
E
THR
272
n
256
THR
272
E
LEU
273
n
257
LEU
273
E
HIS
274
n
258
HIS
274
E
ALA
275
n
259
ALA
275
E
ARG
276
n
260
ARG
276
E
ILE
277
n
261
ILE
277
E
ASN
278
n
262
ASN
278
E
VAL
279
n
263
VAL
279
E
MET
280
n
264
MET
280
E
GLU
281
n
265
GLU
281
E
CYS
282
n
266
CYS
282
E
LEU
283
n
267
LEU
283
E
LEU
284
n
268
LEU
284
E
HIS
285
n
269
HIS
285
E
ILE
286
n
270
ILE
286
E
ALA
287
n
271
ALA
287
E
TYR
288
n
272
TYR
288
E
ARG
289
n
273
ARG
289
E
LEU
290
n
274
LEU
290
E
ASP
291
n
275
ASP
291
E
PHE
292
n
276
PHE
292
E
LYS
293
n
277
LYS
293
E
LYS
294
n
278
LYS
294
E
TRP
295
n
279
TRP
295
E
SER
296
n
280
SER
296
E
ALA
297
n
281
ALA
297
E
ARG
298
n
282
ARG
298
E
GLY
299
n
283
GLY
299
E
ALA
300
n
284
GLU
300
E
GLY
301
n
285
GLY
301
E
HIS
302
n
286
HIS
302
E
GLN
303
n
287
GLN
303
E
GLU
304
n
288
GLU
304
E
LEU
305
n
289
LEU
305
E
LEU
306
n
290
LEU
306
E
HIS
307
n
291
HIS
307
E
SER
308
n
292
SER
308
E
ARG
309
n
293
ARG
309
E
LYS
310
n
294
LYS
310
E
LYS
311
n
295
LYS
311
E
LEU
312
n
296
LEU
312
E
ILE
313
n
297
ILE
313
E
GLN
314
n
298
GLN
314
E
ASP
315
n
299
ASP
315
E
ARG
316
n
300
ARG
316
E
PHE
317
n
301
PHE
317
E
LYS
318
n
302
LYS
318
E
ASP
319
n
303
ASP
319
E
ASP
320
n
304
ASP
320
E
LEU
321
n
305
LEU
321
E
ASN
322
n
306
ASN
322
E
LEU
323
n
307
LEU
323
E
LEU
324
n
308
LEU
324
E
ILE
325
n
309
ILE
325
E
ASP
326
n
310
ASP
326
E
ILE
327
n
311
ILE
327
E
VAL
328
n
312
VAL
328
E
LYS
329
n
313
LYS
329
E
GLN
330
n
314
GLN
330
E
GLY
331
n
315
GLY
331
E
SER
332
n
316
SER
332
E
GLY
333
n
317
GLY
333
E
THR
334
n
318
THR
334
E
THR
335
n
319
THR
335
E
ASN
336
n
320
ASN
336
E
ASP
337
n
321
ASP
337
E
GLY
338
n
322
GLY
338
E
ASN
339
n
323
ASN
339
E
THR
340
n
324
THR
340
E
ALA
341
n
325
ALA
341
E
ARG
342
n
326
ARG
342
E
ARG
343
n
327
ARG
343
E
PHE
344
n
328
PHE
344
E
PHE
345
n
329
PHE
345
E
GLU
346
n
330
GLU
346
E
PHE
347
n
331
PHE
347
E
PRO
348
n
332
PRO
348
E
ASP
349
n
333
ASP
349
E
LYS
350
n
334
LYS
350
E
THR
351
n
335
THR
351
E
ALA
352
n
336
ALA
352
E
ALA
353
n
337
ALA
353
E
ILE
354
n
338
ILE
354
E
THR
355
n
339
THR
355
E
GLY
356
n
340
GLY
356
E
LEU
357
n
341
LEU
357
E
ASP
358
n
342
ASP
358
E
GLU
359
n
343
GLU
359
E
ASP
360
n
344
ASP
360
E
LEU
361
n
345
LEU
361
E
ILE
362
n
346
ILE
362
E
ARG
363
n
347
ARG
363
E
ARG
364
n
348
ARG
364
E
PHE
365
n
349
PHE
365
E
SER
366
n
350
SER
366
E
VAL
367
n
351
VAL
367
E
ILE
368
n
352
ILE
368
E
LEU
369
n
353
LEU
369
E
GLN
370
n
354
GLN
370
E
ALA
371
n
355
ALA
371
E
ILE
372
n
356
ILE
372
E
THR
373
n
357
THR
373
E
SER
374
n
358
SER
374
E
GLY
375
n
359
GLY
375
E
GLU
376
n
360
GLU
376
E
ILE
377
n
361
ILE
377
E
ILE
378
n
362
ILE
378
E
ASP
379
n
363
ASP
379
E
VAL
380
n
364
VAL
380
E
PRO
381
n
365
PRO
381
E
LYS
382
n
366
LYS
382
E
PHE
383
n
367
PHE
383
E
LYS
384
n
368
LYS
384
E
GLU
385
n
369
GLU
385
E
TYR
386
n
370
TYR
386
E
ALA
387
n
371
ALA
387
E
ARG
388
n
372
ARG
388
E
THR
389
n
373
THR
389
E
THR
390
n
374
THR
390
E
ALA
391
n
375
ALA
391
E
GLU
392
n
376
GLU
392
E
LYS
393
n
377
LYS
393
E
TYR
394
n
378
TYR
394
E
VAL
395
n
379
VAL
395
E
GLU
396
n
380
GLU
396
E
LEU
397
n
381
LEU
397
E
TYR
398
n
382
TYR
398
E
ASP
399
n
383
ASP
399
E
TRP
400
n
384
TRP
400
E
TYR
401
n
385
TYR
401
E
TYR
402
n
386
TYR
402
E
MET
403
n
387
MET
403
E
SER
404
n
388
SER
404
E
SER
405
n
389
SER
405
E
THR
406
n
390
THR
406
E
VAL
407
n
391
VAL
407
E
HIS
408
n
392
HIS
408
E
LYS
409
n
393
LYS
409
E
LEU
410
n
394
LEU
410
E
LEU
411
n
395
LEU
411
E
ILE
412
n
396
ILE
412
E
HIS
413
n
397
HIS
413
E
GLY
414
n
398
GLY
414
E
GLY
415
n
399
GLY
415
E
ASP
416
n
400
ASP
416
E
ILE
417
n
401
ILE
417
E
ILE
418
n
402
ILE
418
E
ALA
419
n
403
ALA
419
E
GLU
420
n
404
GLU
420
E
ASN
421
n
405
ASN
421
E
ALA
422
n
406
ALA
422
E
ILE
423
n
407
ILE
423
E
VAL
424
n
408
VAL
424
E
PRO
425
n
409
PRO
425
E
ILE
426
n
410
ILE
426
E
GLY
427
n
411
GLY
427
E
SER
428
n
412
SER
428
E
LEU
429
n
413
LEU
429
E
SER
430
n
414
SER
430
E
GLU
431
n
415
GLU
431
E
GLU
432
n
416
GLU
432
E
ALA
433
n
417
ALA
433
E
SER
434
n
418
SER
434
E
GLU
435
n
419
GLU
435
E
ALA
436
n
420
ALA
436
E
ARG
437
n
421
ARG
437
E
ASN
438
n
422
ASN
438
E
LYS
439
n
423
LYS
439
E
ASP
440
n
424
ASP
440
E
PHE
441
n
425
PHE
441
E
ARG
442
n
426
ARG
442
E
ARG
443
n
427
ARG
443
E
PHE
444
n
428
PHE
444
E
ARG
445
n
429
ARG
445
E
GLU
446
n
430
GLU
446
E
HIS
447
n
431
HIS
447
E
HIS
448
n
432
HIS
448
E
SER
449
n
433
SER
449
E
ARG
450
n
434
ARG
450
E
LYS
451
n
435
LYS
451
E
LYS
452
n
436
LYS
452
E
SER
453
n
437
SER
453
E
ARG
454
n
438
ARG
454
E
GLN
455
n
439
GLN
455
E
ALA
456
n
440
ALA
456
E
SER
457
n
441
SER
457
E
ASN
458
n
442
ASN
458
E
GLU
459
n
443
GLU
459
E
ASP
460
n
444
ASP
460
E
ILE
461
n
445
ILE
461
E
LEU
462
n
446
LEU
462
E
ASN
463
n
447
ASN
463
E
MET
464
n
448
MET
464
E
LEU
465
n
449
LEU
465
E
ILE
466
n
450
ILE
466
E
ILE
467
n
451
ILE
467
E
SER
468
n
452
SER
468
E
SER
469
n
453
SER
469
E
ASP
470
n
454
ASP
470
E
PRO
471
n
455
PRO
471
E
LEU
472
n
456
LEU
472
E
ILE
473
n
457
ILE
473
E
SER
474
n
458
SER
474
E
PHE
475
n
459
PHE
475
E
THR
476
n
460
THR
476
E
ARG
477
n
461
ARG
477
E
PRO
478
n
462
PRO
478
E
LYS
479
n
463
LYS
479
E
LEU
480
n
464
LEU
480
E
ASP
481
n
465
ASP
481
E
ALA
482
n
466
ALA
482
E
HIS
483
n
467
HIS
483
E
LYS
484
n
468
LYS
484
E
ARG
485
n
469
ARG
485
E
GLN
486
n
470
GLN
486
E
THR
487
n
471
THR
487
E
TYR
488
n
472
TYR
488
E
PHE
489
n
473
PHE
489
E
LYS
490
n
474
LYS
490
E
GLU
491
n
475
GLU
491
E
THR
492
n
476
THR
492
E
VAL
493
n
477
VAL
493
E
GLU
494
n
478
GLU
494
E
LEU
495
n
479
LEU
495
E
LEU
496
n
480
LEU
496
E
GLN
497
n
481
GLN
497
E
LEU
498
n
482
LEU
498
E
GLN
499
n
483
GLN
499
E
ASP
500
n
484
ASP
500
E
n
485
501
E
n
486
502
E
n
487
503
E
n
488
504
E
n
489
505
E
n
490
506
E
n
491
507
E
n
492
508
E
n
493
509
E
n
494
510
E
n
495
511
E
n
496
512
E
n
497
513
E
n
1
1
F
n
2
2
F
DT
3
n
3
DT
3
F
DC
4
n
4
DC
4
F
DT
5
n
5
DT
5
F
DG
6
n
6
DG
6
F
DG
7
n
7
DG
7
F
DC
8
n
8
DC
8
F
DC
9
n
9
DC
9
F
DT
10
n
10
DT
10
F
DA
11
n
11
DA
11
F
DG
12
n
12
DG
12
F
DA
13
n
13
DA
13
F
DT
14
n
14
DT
14
F
DC
15
n
15
DC
15
F
DT
16
n
16
DT
16
F
DC
17
n
1
DC
17
G
DA
18
n
2
DA
18
G
DC
19
n
3
DC
19
G
DG
20
n
4
DG
20
G
DG
21
n
5
DG
21
G
DT
22
n
6
DT
22
G
DG
23
n
7
DG
23
G
DG
24
n
8
DG
24
G
DA
25
n
9
DA
25
G
DT
26
n
10
DT
26
G
DC
27
n
11
DC
27
G
DG
28
n
12
DG
28
G
DA
29
n
13
DA
29
G
DA
30
n
14
DA
30
G
DA
31
n
15
DA
31
G
DA
32
n
16
DA
32
G
DT
1
n
1
DT
1
H
DT
2
n
2
DT
2
H
DT
3
n
3
DT
3
H
DT
4
n
4
DT
4
H
DC
5
n
5
DC
5
H
DG
6
n
6
DG
6
H
DA
7
n
7
DA
7
H
DT
8
n
8
DT
8
H
DC
9
n
9
DC
9
H
DC
10
n
10
DC
10
H
DA
11
n
11
DA
11
H
DC
12
n
12
DC
12
H
DC
13
n
13
DC
13
H
DG
14
n
14
DG
14
H
DT
15
n
15
DT
15
H
DG
16
n
16
DG
16
H
DA
17
n
17
DA
17
H
DG
18
n
18
DG
18
H
DA
19
n
19
DA
19
H
DT
20
n
20
DT
20
H
DC
21
n
21
DC
21
H
DT
22
n
22
DT
22
H
DA
23
n
23
DA
23
H
DG
24
n
24
DG
24
H
DG
25
n
25
DG
25
H
DC
26
n
26
DC
26
H
DC
27
n
27
DC
27
H
DA
28
n
28
DA
28
H
DG
29
n
29
DG
29
H
DA
30
n
30
DA
30
H
n
31
31
H
n
32
32
H
author_defined_assembly
8
octameric
The whole assembly was purified by gel filtration. A protein standard containing 6 different protein ranging from 1.7 kDa to 670 kDa was also passed through the same gel filtration column. Comparison of the two chromatography profiles indicate the assembly has an approximate molecular mass of 230 kDa, which is about the same as the combined molecular weight of two copies of HzTransib transposase and two TIR substrate DNA.
gel filtration
A
ASP
125
A
OD1
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
A
ASP
125
A
OD2
ASP
109
1_555
54.6
A
ASP
125
A
OD1
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
A
GLY
126
A
O
GLY
110
1_555
95.8
A
ASP
125
A
OD2
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
A
GLY
126
A
O
GLY
110
1_555
76.1
A
ASP
125
A
OD1
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
A
GLU
435
A
OE2
GLU
419
1_555
70.1
A
ASP
125
A
OD2
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
A
GLU
435
A
OE2
GLU
419
1_555
97.6
A
GLY
126
A
O
GLY
110
1_555
A
CA
601
I
CA
CA
1_555
A
GLU
435
A
OE2
GLU
419
1_555
165.3
A
ASP
125
A
OD1
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
D
DG
16
D
O3'
DG
16
1_555
127.5
A
ASP
125
A
OD2
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
D
DG
16
D
O3'
DG
16
1_555
140.8
A
GLY
126
A
O
GLY
110
1_555
A
CA
601
I
CA
CA
1_555
D
DG
16
D
O3'
DG
16
1_555
133.1
A
GLU
435
A
OE2
GLU
419
1_555
A
CA
601
I
CA
CA
1_555
D
DG
16
D
O3'
DG
16
1_555
59.2
A
ASP
125
A
OD1
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
153.5
A
ASP
125
A
OD2
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
103.3
A
GLY
126
A
O
GLY
110
1_555
A
CA
601
I
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
92.0
A
GLU
435
A
OE2
GLU
419
1_555
A
CA
601
I
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
102.4
D
DG
16
D
O3'
DG
16
1_555
A
CA
601
I
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
58.2
A
ASP
224
A
OD2
ASP
208
1_555
A
CA
602
J
CA
CA
1_555
B
DT
16
B
O3'
DT
16
1_555
152.6
A
ASP
224
A
OD2
ASP
208
1_555
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP1
DA
17
1_555
130.1
B
DT
16
B
O3'
DT
16
1_555
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP1
DA
17
1_555
61.8
A
ASP
224
A
OD2
ASP
208
1_555
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
120.7
B
DT
16
B
O3'
DT
16
1_555
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
86.7
D
DA
17
D
OP1
DA
17
1_555
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
56.8
E
ASP
125
E
OD1
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
E
ASP
125
E
OD2
ASP
109
1_555
53.6
E
ASP
125
E
OD1
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
E
GLY
126
E
O
GLY
110
1_555
93.7
E
ASP
125
E
OD2
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
E
GLY
126
E
O
GLY
110
1_555
75.2
E
ASP
125
E
OD1
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
E
GLU
435
E
OE2
GLU
419
1_555
69.2
E
ASP
125
E
OD2
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
E
GLU
435
E
OE2
GLU
419
1_555
97.0
E
GLY
126
E
O
GLY
110
1_555
E
CA
601
K
CA
CA
1_555
E
GLU
435
E
OE2
GLU
419
1_555
162.3
E
ASP
125
E
OD1
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
H
DG
16
H
O3'
DG
16
1_555
133.9
E
ASP
125
E
OD2
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
H
DG
16
H
O3'
DG
16
1_555
158.8
E
GLY
126
E
O
GLY
110
1_555
E
CA
601
K
CA
CA
1_555
H
DG
16
H
O3'
DG
16
1_555
119.0
E
GLU
435
E
OE2
GLU
419
1_555
E
CA
601
K
CA
CA
1_555
H
DG
16
H
O3'
DG
16
1_555
73.4
E
ASP
125
E
OD1
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
H
DA
17
H
OP2
DA
17
1_555
173.8
E
ASP
125
E
OD2
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
H
DA
17
H
OP2
DA
17
1_555
120.9
E
GLY
126
E
O
GLY
110
1_555
E
CA
601
K
CA
CA
1_555
H
DA
17
H
OP2
DA
17
1_555
81.6
E
GLU
435
E
OE2
GLU
419
1_555
E
CA
601
K
CA
CA
1_555
H
DA
17
H
OP2
DA
17
1_555
115.8
H
DG
16
H
O3'
DG
16
1_555
E
CA
601
K
CA
CA
1_555
H
DA
17
H
OP2
DA
17
1_555
52.3
E
ASP
224
E
OD2
ASP
208
1_555
E
CA
602
L
CA
CA
1_555
H
DA
17
H
OP1
DA
17
1_555
152.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
80
A
N
ALA
64
A
O
LYS
87
A
O
LYS
71
A
N
ALA
86
A
N
ALA
70
A
O
PHE
180
A
O
PHE
164
A
O
ARG
176
A
O
ARG
160
A
N
LEU
151
A
N
LEU
135
A
N
LEU
156
A
N
LEU
140
A
O
TRP
164
A
O
TRP
148
A
N
ALA
80
A
N
ALA
64
A
O
LYS
87
A
O
LYS
71
A
N
ALA
86
A
N
ALA
70
A
O
PHE
180
A
O
PHE
164
A
O
ARG
176
A
O
ARG
160
A
N
LEU
151
A
N
LEU
135
A
O
SER
150
A
O
SER
134
A
N
GLY
123
A
N
GLY
107
A
N
LEU
118
A
N
LEU
102
A
O
SER
215
A
O
SER
199
A
O
ILE
214
A
O
ILE
198
A
N
SER
207
A
N
SER
191
E
N
ALA
80
E
N
ALA
64
E
O
LYS
87
E
O
LYS
71
E
N
ALA
86
E
N
ALA
70
E
O
PHE
180
E
O
PHE
164
E
O
ARG
176
E
O
ARG
160
E
N
LEU
151
E
N
LEU
135
E
N
LEU
156
E
N
LEU
140
E
O
TRP
164
E
O
TRP
148
E
N
ALA
80
E
N
ALA
64
E
O
LYS
87
E
O
LYS
71
E
N
ALA
86
E
N
ALA
70
E
O
PHE
180
E
O
PHE
164
E
O
ARG
176
E
O
ARG
160
E
N
LEU
151
E
N
LEU
135
E
O
SER
150
E
O
SER
134
E
N
GLY
123
E
N
GLY
107
E
N
LEU
118
E
N
LEU
102
E
O
SER
215
E
O
SER
199
E
O
ILE
214
E
O
ILE
198
E
N
SER
207
E
N
SER
191
1
A
CG
GLU
300
A
CG
GLU
284
1
Y
1
A
CD
GLU
300
A
CD
GLU
284
1
Y
1
A
OE1
GLU
300
A
OE1
GLU
284
1
Y
1
A
OE2
GLU
300
A
OE2
GLU
284
1
Y
1
E
CG
GLU
300
E
CG
GLU
284
1
Y
1
E
CD
GLU
300
E
CD
GLU
284
1
Y
1
E
OE1
GLU
300
E
OE1
GLU
284
1
Y
1
E
OE2
GLU
300
E
OE2
GLU
284
1
Y
1
A
LYS
17
A
LYS
1
1
Y
1
A
PRO
18
A
PRO
2
1
Y
1
A
ALA
19
A
ALA
3
1
Y
1
A
PRO
20
A
PRO
4
1
Y
1
A
GLN
501
A
GLN
485
1
Y
1
A
GLU
502
A
GLU
486
1
Y
1
A
ALA
503
A
ALA
487
1
Y
1
A
PRO
504
A
PRO
488
1
Y
1
A
THR
505
A
THR
489
1
Y
1
A
GLU
506
A
GLU
490
1
Y
1
A
PHE
507
A
PHE
491
1
Y
1
A
HIS
508
A
HIS
492
1
Y
1
A
HIS
509
A
HIS
493
1
Y
1
A
HIS
510
A
HIS
494
1
Y
1
A
HIS
511
A
HIS
495
1
Y
1
A
HIS
512
A
HIS
496
1
Y
1
A
HIS
513
A
HIS
497
1
Y
1
B
DG
1
B
DG
1
1
Y
1
B
DA
2
B
DA
2
1
Y
1
D
DT
31
D
DT
31
1
Y
1
D
DC
32
D
DC
32
1
Y
1
E
LYS
17
E
LYS
1
1
Y
1
E
PRO
18
E
PRO
2
1
Y
1
E
ALA
19
E
ALA
3
1
Y
1
E
PRO
20
E
PRO
4
1
Y
1
E
GLN
501
E
GLN
485
1
Y
1
E
GLU
502
E
GLU
486
1
Y
1
E
ALA
503
E
ALA
487
1
Y
1
E
PRO
504
E
PRO
488
1
Y
1
E
THR
505
E
THR
489
1
Y
1
E
GLU
506
E
GLU
490
1
Y
1
E
PHE
507
E
PHE
491
1
Y
1
E
HIS
508
E
HIS
492
1
Y
1
E
HIS
509
E
HIS
493
1
Y
1
E
HIS
510
E
HIS
494
1
Y
1
E
HIS
511
E
HIS
495
1
Y
1
E
HIS
512
E
HIS
496
1
Y
1
E
HIS
513
E
HIS
497
1
Y
1
F
DG
1
F
DG
1
1
Y
1
F
DA
2
F
DA
2
1
Y
1
H
DT
31
H
DT
31
1
Y
1
H
DC
32
H
DC
32
1
Y
1
A
ILE
58
-154.92
-33.21
1
A
SER
107
-168.34
94.53
1
A
SER
128
-110.69
-147.63
1
A
ASN
136
45.30
75.77
1
A
ILE
137
-62.38
0.23
1
A
GLU
138
-28.38
125.49
1
A
GLN
141
63.98
-2.42
1
A
ASP
143
-116.01
79.58
1
A
SER
332
169.98
150.22
1
A
ASP
337
20.78
-104.76
1
A
ASN
421
-86.02
46.08
1
A
HIS
483
-91.63
32.67
1
E
ILE
58
-154.94
-33.21
1
E
SER
107
-168.39
94.54
1
E
SER
128
-110.71
-147.68
1
E
ASN
136
45.25
75.83
1
E
ILE
137
-62.47
0.28
1
E
GLU
138
-28.43
125.52
1
E
GLN
141
64.00
-2.50
1
E
ASP
143
-116.06
79.58
1
E
SER
332
170.04
150.26
1
E
ASP
337
20.84
-104.82
1
E
ASN
421
-86.06
46.11
1
E
HIS
483
-91.72
32.75
0.006
10552
0.950
14758
19.607
5970
0.058
1674
0.036
1506
refinement
PHENIX
1.16_3549:
N
Cryo-EM structure of HzTransib/nicked TIR substrate DNA hairpin forming complex (HFC)
1
N
N
2
N
N
3
N
N
4
N
N
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
SER
25
A
SER
9
HELX_P
A
LYS
37
A
LYS
21
1
AA1
13
A
SER
39
A
SER
23
HELX_P
A
GLU
53
A
GLU
37
1
AA2
15
A
SER
61
A
SER
45
HELX_P
A
TYR
73
A
TYR
57
1
AA3
13
A
ALA
89
A
ALA
73
HELX_P
A
ILE
105
A
ILE
89
1
AA4
17
A
SER
171
A
SER
155
HELX_P
A
CYS
175
A
CYS
159
5
AA5
5
A
THR
186
A
THR
170
HELX_P
A
ALA
203
A
ALA
187
1
AA6
18
A
ASP
224
A
ASP
208
HELX_P
A
SER
232
A
SER
216
1
AA7
9
A
LYS
246
A
LYS
230
HELX_P
A
SER
251
A
SER
235
1
AA8
6
A
LEU
253
A
LEU
237
HELX_P
A
SER
258
A
SER
242
1
AA9
6
A
GLY
264
A
GLY
248
HELX_P
A
PHE
268
A
PHE
252
5
AB1
5
A
SER
271
A
SER
255
HELX_P
A
LEU
290
A
LEU
274
1
AB2
20
A
GLY
301
A
GLY
285
HELX_P
A
ASN
322
A
ASN
306
1
AB3
22
A
GLY
338
A
GLY
322
HELX_P
A
PHE
347
A
PHE
331
1
AB4
10
A
PHE
347
A
PHE
331
HELX_P
A
GLY
356
A
GLY
340
1
AB5
10
A
ASP
358
A
ASP
342
HELX_P
A
GLY
375
A
GLY
359
1
AB6
18
A
ASP
379
A
ASP
363
HELX_P
A
TYR
398
A
TYR
382
1
AB7
20
A
SER
404
A
SER
388
HELX_P
A
ILE
412
A
ILE
396
1
AB8
9
A
HIS
413
A
HIS
397
HELX_P
A
ASN
421
A
ASN
405
1
AB9
9
A
GLU
431
A
GLU
415
HELX_P
A
HIS
448
A
HIS
432
1
AC1
18
A
SER
453
A
SER
437
HELX_P
A
SER
469
A
SER
453
1
AC2
17
A
ASP
470
A
ASP
454
HELX_P
A
THR
476
A
THR
460
1
AC3
7
A
PHE
489
A
PHE
473
HELX_P
A
LEU
496
A
LEU
480
1
AC4
8
E
SER
25
E
SER
9
HELX_P
E
LYS
37
E
LYS
21
1
AC5
13
E
SER
39
E
SER
23
HELX_P
E
GLU
53
E
GLU
37
1
AC6
15
E
SER
61
E
SER
45
HELX_P
E
TYR
73
E
TYR
57
1
AC7
13
E
ALA
89
E
ALA
73
HELX_P
E
ILE
105
E
ILE
89
1
AC8
17
E
SER
171
E
SER
155
HELX_P
E
CYS
175
E
CYS
159
5
AC9
5
E
THR
186
E
THR
170
HELX_P
E
ALA
203
E
ALA
187
1
AD1
18
E
ASP
224
E
ASP
208
HELX_P
E
SER
232
E
SER
216
1
AD2
9
E
LYS
246
E
LYS
230
HELX_P
E
SER
251
E
SER
235
1
AD3
6
E
LEU
253
E
LEU
237
HELX_P
E
SER
258
E
SER
242
1
AD4
6
E
GLY
264
E
GLY
248
HELX_P
E
PHE
268
E
PHE
252
5
AD5
5
E
SER
271
E
SER
255
HELX_P
E
LEU
290
E
LEU
274
1
AD6
20
E
GLY
301
E
GLY
285
HELX_P
E
ASN
322
E
ASN
306
1
AD7
22
E
GLY
338
E
GLY
322
HELX_P
E
PHE
347
E
PHE
331
1
AD8
10
E
PHE
347
E
PHE
331
HELX_P
E
GLY
356
E
GLY
340
1
AD9
10
E
ASP
358
E
ASP
342
HELX_P
E
GLY
375
E
GLY
359
1
AE1
18
E
ASP
379
E
ASP
363
HELX_P
E
TYR
398
E
TYR
382
1
AE2
20
E
SER
404
E
SER
388
HELX_P
E
ILE
412
E
ILE
396
1
AE3
9
E
HIS
413
E
HIS
397
HELX_P
E
ASN
421
E
ASN
405
1
AE4
9
E
GLU
431
E
GLU
415
HELX_P
E
HIS
448
E
HIS
432
1
AE5
18
E
SER
453
E
SER
437
HELX_P
E
SER
469
E
SER
453
1
AE6
17
E
ASP
470
E
ASP
454
HELX_P
E
THR
476
E
THR
460
1
AE7
7
E
PHE
489
E
PHE
473
HELX_P
E
LEU
496
E
LEU
480
1
AE8
8
metalc
2.391
A
ASP
125
A
OD1
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
metalc
2.371
A
ASP
125
A
OD2
ASP
109
1_555
A
CA
601
I
CA
CA
1_555
metalc
2.259
A
GLY
126
A
O
GLY
110
1_555
A
CA
601
I
CA
CA
1_555
metalc
2.497
A
ASP
224
A
OD2
ASP
208
1_555
A
CA
602
J
CA
CA
1_555
metalc
2.341
A
GLU
435
A
OE2
GLU
419
1_555
A
CA
601
I
CA
CA
1_555
metalc
2.725
A
CA
601
I
CA
CA
1_555
D
DG
16
D
O3'
DG
16
1_555
metalc
2.318
A
CA
601
I
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
metalc
2.801
A
CA
602
J
CA
CA
1_555
B
DT
16
B
O3'
DT
16
1_555
metalc
2.576
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP1
DA
17
1_555
metalc
2.739
A
CA
602
J
CA
CA
1_555
D
DA
17
D
OP2
DA
17
1_555
metalc
2.448
E
ASP
125
E
OD1
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
metalc
2.401
E
ASP
125
E
OD2
ASP
109
1_555
E
CA
601
K
CA
CA
1_555
metalc
2.282
E
GLY
126
E
O
GLY
110
1_555
E
CA
601
K
CA
CA
1_555
metalc
2.470
E
ASP
224
E
OD2
ASP
208
1_555
E
CA
602
L
CA
CA
1_555
metalc
2.337
E
GLU
435
E
OE2
GLU
419
1_555
E
CA
601
K
CA
CA
1_555
metalc
3.006
E
CA
601
K
CA
CA
1_555
H
DG
16
H
O3'
DG
16
1_555
metalc
2.525
E
CA
601
K
CA
CA
1_555
H
DA
17
H
OP2
DA
17
1_555
metalc
2.858
E
CA
602
L
CA
CA
1_555
H
DA
17
H
OP1
DA
17
1_555
hydrog
WATSON-CRICK
B
DT
3
B
N3
DT
3
1_555
D
DA
30
D
N1
DA
30
1_555
hydrog
WATSON-CRICK
B
DT
3
B
O4
DT
3
1_555
D
DA
30
D
N6
DA
30
1_555
hydrog
WATSON-CRICK
B
DC
4
B
N3
DC
4
1_555
D
DG
29
D
N1
DG
29
1_555
hydrog
WATSON-CRICK
B
DC
4
B
N4
DC
4
1_555
D
DG
29
D
O6
DG
29
1_555
hydrog
WATSON-CRICK
B
DC
4
B
O2
DC
4
1_555
D
DG
29
D
N2
DG
29
1_555
hydrog
DT-DA PAIR
B
DT
5
B
O4
DT
5
1_555
D
DA
28
D
N6
DA
28
1_555
hydrog
DG-DC PAIR
B
DG
6
B
O6
DG
6
1_555
D
DC
27
D
N4
DC
27
1_555
hydrog
WATSON-CRICK
B
DG
7
B
N1
DG
7
1_555
D
DC
26
D
N3
DC
26
1_555
hydrog
WATSON-CRICK
B
DG
7
B
N2
DG
7
1_555
D
DC
26
D
O2
DC
26
1_555
hydrog
WATSON-CRICK
B
DG
7
B
O6
DG
7
1_555
D
DC
26
D
N4
DC
26
1_555
hydrog
WATSON-CRICK
B
DC
8
B
N3
DC
8
1_555
D
DG
25
D
N1
DG
25
1_555
hydrog
WATSON-CRICK
B
DC
8
B
N4
DC
8
1_555
D
DG
25
D
O6
DG
25
1_555
hydrog
WATSON-CRICK
B
DC
8
B
O2
DC
8
1_555
D
DG
25
D
N2
DG
25
1_555
hydrog
WATSON-CRICK
B
DC
9
B
N3
DC
9
1_555
D
DG
24
D
N1
DG
24
1_555
hydrog
WATSON-CRICK
B
DC
9
B
N4
DC
9
1_555
D
DG
24
D
O6
DG
24
1_555
hydrog
WATSON-CRICK
B
DC
9
B
O2
DC
9
1_555
D
DG
24
D
N2
DG
24
1_555
hydrog
WATSON-CRICK
B
DT
10
B
N3
DT
10
1_555
D
DA
23
D
N1
DA
23
1_555
hydrog
WATSON-CRICK
B
DT
10
B
O4
DT
10
1_555
D
DA
23
D
N6
DA
23
1_555
hydrog
WATSON-CRICK
B
DA
11
B
N1
DA
11
1_555
D
DT
22
D
N3
DT
22
1_555
hydrog
WATSON-CRICK
B
DA
11
B
N6
DA
11
1_555
D
DT
22
D
O4
DT
22
1_555
hydrog
DG-DC PAIR
B
DG
12
B
N2
DG
12
1_555
D
DC
21
D
N3
DC
21
1_555
hydrog
WATSON-CRICK
B
DA
13
B
N1
DA
13
1_555
D
DT
20
D
N3
DT
20
1_555
hydrog
WATSON-CRICK
B
DA
13
B
N6
DA
13
1_555
D
DT
20
D
O4
DT
20
1_555
hydrog
WATSON-CRICK
B
DT
14
B
N3
DT
14
1_555
D
DA
19
D
N1
DA
19
1_555
hydrog
WATSON-CRICK
B
DT
14
B
O4
DT
14
1_555
D
DA
19
D
N6
DA
19
1_555
hydrog
WATSON-CRICK
B
DC
15
B
N3
DC
15
1_555
D
DG
18
D
N1
DG
18
1_555
hydrog
WATSON-CRICK
B
DC
15
B
N4
DC
15
1_555
D
DG
18
D
O6
DG
18
1_555
hydrog
WATSON-CRICK
B
DC
15
B
O2
DC
15
1_555
D
DG
18
D
N2
DG
18
1_555
hydrog
DT-DG MISPAIR
B
DT
16
B
O2
DT
16
1_555
D
DG
18
D
N1
DG
18
1_555
hydrog
WATSON-CRICK
C
DA
18
C
N1
DA
2
1_555
D
DT
15
D
N3
DT
15
1_555
hydrog
WATSON-CRICK
C
DA
18
C
N6
DA
2
1_555
D
DT
15
D
O4
DT
15
1_555
hydrog
TYPE_8_PAIR
C
DA
18
C
N1
DA
2
1_555
D
DG
16
D
N1
DG
16
1_555
hydrog
TYPE_8_PAIR
C
DA
18
C
N6
DA
2
1_555
D
DG
16
D
O6
DG
16
1_555
hydrog
WATSON-CRICK
C
DC
19
C
N3
DC
3
1_555
D
DG
14
D
N1
DG
14
1_555
hydrog
WATSON-CRICK
C
DC
19
C
N4
DC
3
1_555
D
DG
14
D
O6
DG
14
1_555
hydrog
WATSON-CRICK
C
DC
19
C
O2
DC
3
1_555
D
DG
14
D
N2
DG
14
1_555
hydrog
WATSON-CRICK
C
DG
20
C
N1
DG
4
1_555
D
DC
13
D
N3
DC
13
1_555
hydrog
WATSON-CRICK
C
DG
20
C
N2
DG
4
1_555
D
DC
13
D
O2
DC
13
1_555
hydrog
WATSON-CRICK
C
DG
20
C
O6
DG
4
1_555
D
DC
13
D
N4
DC
13
1_555
hydrog
WATSON-CRICK
C
DG
21
C
N1
DG
5
1_555
D
DC
12
D
N3
DC
12
1_555
hydrog
WATSON-CRICK
C
DG
21
C
N2
DG
5
1_555
D
DC
12
D
O2
DC
12
1_555
hydrog
WATSON-CRICK
C
DG
21
C
O6
DG
5
1_555
D
DC
12
D
N4
DC
12
1_555
hydrog
WATSON-CRICK
C
DG
21
C
N1
DG
5
1_555
D
DC
13
D
N3
DC
13
1_555
hydrog
WATSON-CRICK
C
DG
21
C
N2
DG
5
1_555
D
DC
13
D
O2
DC
13
1_555
hydrog
WATSON-CRICK
C
DG
21
C
O6
DG
5
1_555
D
DC
13
D
N4
DC
13
1_555
hydrog
WATSON-CRICK
C
DT
22
C
N3
DT
6
1_555
D
DA
11
D
N1
DA
11
1_555
hydrog
WATSON-CRICK
C
DT
22
C
O4
DT
6
1_555
D
DA
11
D
N6
DA
11
1_555
hydrog
WATSON-CRICK
C
DG
23
C
N1
DG
7
1_555
D
DC
10
D
N3
DC
10
1_555
hydrog
WATSON-CRICK
C
DG
23
C
N2
DG
7
1_555
D
DC
10
D
O2
DC
10
1_555
hydrog
WATSON-CRICK
C
DG
23
C
O6
DG
7
1_555
D
DC
10
D
N4
DC
10
1_555
hydrog
WATSON-CRICK
C
DG
24
C
N1
DG
8
1_555
D
DC
9
D
N3
DC
9
1_555
hydrog
WATSON-CRICK
C
DG
24
C
N2
DG
8
1_555
D
DC
9
D
O2
DC
9
1_555
hydrog
WATSON-CRICK
C
DG
24
C
O6
DG
8
1_555
D
DC
9
D
N4
DC
9
1_555
hydrog
WATSON-CRICK
C
DA
25
C
N1
DA
9
1_555
D
DT
8
D
N3
DT
8
1_555
hydrog
WATSON-CRICK
C
DA
25
C
N6
DA
9
1_555
D
DT
8
D
O4
DT
8
1_555
hydrog
WATSON-CRICK
C
DT
26
C
N3
DT
10
1_555
D
DA
7
D
N1
DA
7
1_555
hydrog
WATSON-CRICK
C
DT
26
C
O4
DT
10
1_555
D
DA
7
D
N6
DA
7
1_555
hydrog
WATSON-CRICK
C
DC
27
C
N3
DC
11
1_555
D
DG
6
D
N1
DG
6
1_555
hydrog
WATSON-CRICK
C
DC
27
C
N4
DC
11
1_555
D
DG
6
D
O6
DG
6
1_555
hydrog
WATSON-CRICK
C
DC
27
C
O2
DC
11
1_555
D
DG
6
D
N2
DG
6
1_555
hydrog
WATSON-CRICK
C
DG
28
C
N1
DG
12
1_555
D
DC
5
D
N3
DC
5
1_555
hydrog
WATSON-CRICK
C
DG
28
C
N2
DG
12
1_555
D
DC
5
D
O2
DC
5
1_555
hydrog
WATSON-CRICK
C
DG
28
C
O6
DG
12
1_555
D
DC
5
D
N4
DC
5
1_555
hydrog
WATSON-CRICK
C
DA
29
C
N1
DA
13
1_555
D
DT
4
D
N3
DT
4
1_555
hydrog
WATSON-CRICK
C
DA
29
C
N6
DA
13
1_555
D
DT
4
D
O4
DT
4
1_555
hydrog
WATSON-CRICK
C
DA
30
C
N1
DA
14
1_555
D
DT
3
D
N3
DT
3
1_555
hydrog
WATSON-CRICK
C
DA
30
C
N6
DA
14
1_555
D
DT
3
D
O4
DT
3
1_555
hydrog
WATSON-CRICK
C
DA
31
C
N1
DA
15
1_555
D
DT
2
D
N3
DT
2
1_555
hydrog
WATSON-CRICK
C
DA
31
C
N6
DA
15
1_555
D
DT
2
D
O4
DT
2
1_555
hydrog
WATSON-CRICK
C
DA
32
C
N1
DA
16
1_555
D
DT
1
D
N3
DT
1
1_555
hydrog
WATSON-CRICK
C
DA
32
C
N6
DA
16
1_555
D
DT
1
D
O4
DT
1
1_555
hydrog
WATSON-CRICK
F
DT
3
F
N3
DT
3
1_555
H
DA
30
H
N1
DA
30
1_555
hydrog
WATSON-CRICK
F
DT
3
F
O4
DT
3
1_555
H
DA
30
H
N6
DA
30
1_555
hydrog
WATSON-CRICK
F
DC
4
F
N3
DC
4
1_555
H
DG
29
H
N1
DG
29
1_555
hydrog
WATSON-CRICK
F
DC
4
F
N4
DC
4
1_555
H
DG
29
H
O6
DG
29
1_555
hydrog
WATSON-CRICK
F
DC
4
F
O2
DC
4
1_555
H
DG
29
H
N2
DG
29
1_555
hydrog
WATSON-CRICK
F
DT
5
F
N3
DT
5
1_555
H
DA
28
H
N1
DA
28
1_555
hydrog
WATSON-CRICK
F
DT
5
F
O4
DT
5
1_555
H
DA
28
H
N6
DA
28
1_555
hydrog
WATSON-CRICK
F
DG
6
F
N1
DG
6
1_555
H
DC
27
H
N3
DC
27
1_555
hydrog
WATSON-CRICK
F
DG
6
F
N2
DG
6
1_555
H
DC
27
H
O2
DC
27
1_555
hydrog
WATSON-CRICK
F
DG
6
F
O6
DG
6
1_555
H
DC
27
H
N4
DC
27
1_555
hydrog
WATSON-CRICK
F
DG
7
F
N1
DG
7
1_555
H
DC
26
H
N3
DC
26
1_555
hydrog
WATSON-CRICK
F
DG
7
F
N2
DG
7
1_555
H
DC
26
H
O2
DC
26
1_555
hydrog
WATSON-CRICK
F
DG
7
F
O6
DG
7
1_555
H
DC
26
H
N4
DC
26
1_555
hydrog
WATSON-CRICK
F
DC
8
F
N3
DC
8
1_555
H
DG
25
H
N1
DG
25
1_555
hydrog
WATSON-CRICK
F
DC
8
F
N4
DC
8
1_555
H
DG
25
H
O6
DG
25
1_555
hydrog
WATSON-CRICK
F
DC
8
F
O2
DC
8
1_555
H
DG
25
H
N2
DG
25
1_555
hydrog
WATSON-CRICK
F
DC
9
F
N3
DC
9
1_555
H
DG
24
H
N1
DG
24
1_555
hydrog
WATSON-CRICK
F
DC
9
F
N4
DC
9
1_555
H
DG
24
H
O6
DG
24
1_555
hydrog
WATSON-CRICK
F
DC
9
F
O2
DC
9
1_555
H
DG
24
H
N2
DG
24
1_555
hydrog
WATSON-CRICK
F
DT
10
F
N3
DT
10
1_555
H
DA
23
H
N1
DA
23
1_555
hydrog
WATSON-CRICK
F
DT
10
F
O4
DT
10
1_555
H
DA
23
H
N6
DA
23
1_555
hydrog
WATSON-CRICK
F
DA
13
F
N1
DA
13
1_555
H
DT
20
H
N3
DT
20
1_555
hydrog
WATSON-CRICK
F
DA
13
F
N6
DA
13
1_555
H
DT
20
H
O4
DT
20
1_555
hydrog
WATSON-CRICK
F
DT
14
F
N3
DT
14
1_555
H
DA
19
H
N1
DA
19
1_555
hydrog
WATSON-CRICK
F
DT
14
F
O4
DT
14
1_555
H
DA
19
H
N6
DA
19
1_555
hydrog
WATSON-CRICK
F
DC
15
F
N3
DC
15
1_555
H
DG
18
H
N1
DG
18
1_555
hydrog
WATSON-CRICK
F
DC
15
F
N4
DC
15
1_555
H
DG
18
H
O6
DG
18
1_555
hydrog
WATSON-CRICK
F
DC
15
F
O2
DC
15
1_555
H
DG
18
H
N2
DG
18
1_555
hydrog
DT-DG MISPAIR
F
DT
16
F
O2
DT
16
1_555
H
DG
18
H
N1
DG
18
1_555
hydrog
WATSON-CRICK
G
DA
18
G
N1
DA
2
1_555
H
DT
15
H
N3
DT
15
1_555
hydrog
WATSON-CRICK
G
DA
18
G
N6
DA
2
1_555
H
DT
15
H
O4
DT
15
1_555
hydrog
WATSON-CRICK
G
DC
19
G
N3
DC
3
1_555
H
DG
14
H
N1
DG
14
1_555
hydrog
WATSON-CRICK
G
DC
19
G
N4
DC
3
1_555
H
DG
14
H
O6
DG
14
1_555
hydrog
WATSON-CRICK
G
DC
19
G
O2
DC
3
1_555
H
DG
14
H
N2
DG
14
1_555
hydrog
WATSON-CRICK
G
DG
20
G
N1
DG
4
1_555
H
DC
13
H
N3
DC
13
1_555
hydrog
WATSON-CRICK
G
DG
20
G
N2
DG
4
1_555
H
DC
13
H
O2
DC
13
1_555
hydrog
WATSON-CRICK
G
DG
20
G
O6
DG
4
1_555
H
DC
13
H
N4
DC
13
1_555
hydrog
WATSON-CRICK
G
DG
21
G
N1
DG
5
1_555
H
DC
12
H
N3
DC
12
1_555
hydrog
WATSON-CRICK
G
DG
21
G
N2
DG
5
1_555
H
DC
12
H
O2
DC
12
1_555
hydrog
WATSON-CRICK
G
DG
21
G
O6
DG
5
1_555
H
DC
12
H
N4
DC
12
1_555
hydrog
WATSON-CRICK
G
DT
22
G
N3
DT
6
1_555
H
DA
11
H
N1
DA
11
1_555
hydrog
WATSON-CRICK
G
DT
22
G
O4
DT
6
1_555
H
DA
11
H
N6
DA
11
1_555
hydrog
WATSON-CRICK
G
DG
23
G
N1
DG
7
1_555
H
DC
10
H
N3
DC
10
1_555
hydrog
WATSON-CRICK
G
DG
23
G
N2
DG
7
1_555
H
DC
10
H
O2
DC
10
1_555
hydrog
WATSON-CRICK
G
DG
23
G
O6
DG
7
1_555
H
DC
10
H
N4
DC
10
1_555
hydrog
WATSON-CRICK
G
DG
24
G
N1
DG
8
1_555
H
DC
9
H
N3
DC
9
1_555
hydrog
WATSON-CRICK
G
DG
24
G
N2
DG
8
1_555
H
DC
9
H
O2
DC
9
1_555
hydrog
WATSON-CRICK
G
DG
24
G
O6
DG
8
1_555
H
DC
9
H
N4
DC
9
1_555
hydrog
WATSON-CRICK
G
DA
25
G
N1
DA
9
1_555
H
DT
8
H
N3
DT
8
1_555
hydrog
WATSON-CRICK
G
DA
25
G
N6
DA
9
1_555
H
DT
8
H
O4
DT
8
1_555
hydrog
WATSON-CRICK
G
DT
26
G
N3
DT
10
1_555
H
DA
7
H
N1
DA
7
1_555
hydrog
WATSON-CRICK
G
DT
26
G
O4
DT
10
1_555
H
DA
7
H
N6
DA
7
1_555
hydrog
WATSON-CRICK
G
DC
27
G
N3
DC
11
1_555
H
DG
6
H
N1
DG
6
1_555
hydrog
WATSON-CRICK
G
DC
27
G
N4
DC
11
1_555
H
DG
6
H
O6
DG
6
1_555
hydrog
WATSON-CRICK
G
DC
27
G
O2
DC
11
1_555
H
DG
6
H
N2
DG
6
1_555
hydrog
WATSON-CRICK
G
DG
28
G
N1
DG
12
1_555
H
DC
5
H
N3
DC
5
1_555
hydrog
WATSON-CRICK
G
DG
28
G
N2
DG
12
1_555
H
DC
5
H
O2
DC
5
1_555
hydrog
WATSON-CRICK
G
DG
28
G
O6
DG
12
1_555
H
DC
5
H
N4
DC
5
1_555
hydrog
WATSON-CRICK
G
DA
29
G
N1
DA
13
1_555
H
DT
4
H
N3
DT
4
1_555
hydrog
WATSON-CRICK
G
DA
29
G
N6
DA
13
1_555
H
DT
4
H
O4
DT
4
1_555
hydrog
WATSON-CRICK
G
DA
30
G
N1
DA
14
1_555
H
DT
3
H
N3
DT
3
1_555
hydrog
WATSON-CRICK
G
DA
30
G
N6
DA
14
1_555
H
DT
3
H
O4
DT
3
1_555
hydrog
WATSON-CRICK
G
DA
31
G
N1
DA
15
1_555
H
DT
2
H
N3
DT
2
1_555
hydrog
WATSON-CRICK
G
DA
31
G
N6
DA
15
1_555
H
DT
2
H
O4
DT
2
1_555
hydrog
WATSON-CRICK
G
DA
32
G
N1
DA
16
1_555
H
DT
1
H
N3
DT
1
1_555
hydrog
WATSON-CRICK
G
DA
32
G
N6
DA
16
1_555
H
DT
1
H
O4
DT
1
1_555
recombination/dna
RAG-like transposase, DDE family enzyme, Transib, Terminal inverted repeat., RECOMBINATION, recombination-dna complex
B0F0C5_HELZE
UNP
1
17
B0F0C5
KPAPSTIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKAFVAVTDSSAKIALQALLDL
TVNRIFETIRSPDAIQNKQLILISKWGFDGASNQSRYKQNIESGQGDSSIFMTSLVPLKLTADGDTVWVNPKPCSPMYCR
PVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMMTMIDGKICTYLSEAKSNAACYLCLAKPTEMSKLDVI
ASKTISSGVYEFGLSTLHARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDDLNLLIDIVKQGSGTTN
DGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQAITSGEIIDVPKFKEYARTTAEKYVELYDWYYMSSTVHKLLIHGGD
IIAENAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNEDILNMLIISSDPLISFTRPKLDAHKRQTYFKETVELL
QLQDQEAPTEF
6PQX
PDB
2
1
6PQX
6PQX
PDB
3
1
6PQX
6PQX
PDB
4
1
6PQX
17
507
6PQX
17
507
B0F0C5
A
1
1
491
1
16
6PQX
1
16
6PQX
B
2
1
16
17
32
6PQX
17
32
6PQX
C
3
1
16
1
32
6PQX
1
32
6PQX
D
4
1
32
17
507
6PQX
17
507
B0F0C5
E
1
1
491
1
16
6PQX
1
16
6PQX
F
2
1
16
17
32
6PQX
17
32
6PQX
G
3
1
16
1
32
6PQX
1
32
6PQX
H
4
1
32
1
expression tag
HIS
508
6PQX
A
B0F0C5
UNP
492
1
expression tag
HIS
509
6PQX
A
B0F0C5
UNP
493
1
expression tag
HIS
510
6PQX
A
B0F0C5
UNP
494
1
expression tag
HIS
511
6PQX
A
B0F0C5
UNP
495
1
expression tag
HIS
512
6PQX
A
B0F0C5
UNP
496
1
expression tag
HIS
513
6PQX
A
B0F0C5
UNP
497
5
expression tag
HIS
508
6PQX
E
B0F0C5
UNP
492
5
expression tag
HIS
509
6PQX
E
B0F0C5
UNP
493
5
expression tag
HIS
510
6PQX
E
B0F0C5
UNP
494
5
expression tag
HIS
511
6PQX
E
B0F0C5
UNP
495
5
expression tag
HIS
512
6PQX
E
B0F0C5
UNP
496
5
expression tag
HIS
513
6PQX
E
B0F0C5
UNP
497
5
7
5
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
VAL
79
A
VAL
63
A
VAL
81
A
VAL
65
A
SER
85
A
SER
69
A
ILE
88
A
ILE
72
A
ARG
176
A
ARG
160
A
SER
181
A
SER
165
A
ILE
146
A
ILE
130
A
THR
157
A
THR
141
A
THR
162
A
THR
146
A
VAL
165
A
VAL
149
A
VAL
79
A
VAL
63
A
VAL
81
A
VAL
65
A
SER
85
A
SER
69
A
ILE
88
A
ILE
72
A
ARG
176
A
ARG
160
A
SER
181
A
SER
165
A
ILE
146
A
ILE
130
A
THR
157
A
THR
141
A
LEU
116
A
LEU
100
A
ALA
127
A
ALA
111
A
GLU
213
A
GLU
197
A
MET
222
A
MET
206
A
SER
207
A
SER
191
A
LYS
208
A
LYS
192
E
VAL
79
E
VAL
63
E
VAL
81
E
VAL
65
E
SER
85
E
SER
69
E
ILE
88
E
ILE
72
E
ARG
176
E
ARG
160
E
SER
181
E
SER
165
E
ILE
146
E
ILE
130
E
THR
157
E
THR
141
E
THR
162
E
THR
146
E
VAL
165
E
VAL
149
E
VAL
79
E
VAL
63
E
VAL
81
E
VAL
65
E
SER
85
E
SER
69
E
ILE
88
E
ILE
72
E
ARG
176
E
ARG
160
E
SER
181
E
SER
165
E
ILE
146
E
ILE
130
E
THR
157
E
THR
141
E
LEU
116
E
LEU
100
E
ALA
127
E
ALA
111
E
GLU
213
E
GLU
197
E
MET
222
E
MET
206
E
SER
207
E
SER
191
E
LYS
208
E
LYS
192
binding site for residue CA A 601
A
CA
601
Software
5
binding site for residue CA A 602
A
CA
602
Software
3
binding site for residue CA E 601
E
CA
601
Software
5
binding site for residue CA E 602
E
CA
602
Software
3
A
ASP
125
A
ASP
109
5
1_555
A
GLY
126
A
GLY
110
5
1_555
A
GLU
435
A
GLU
419
5
1_555
D
DG
16
D
DG
16
5
1_555
D
DA
17
D
DA
17
5
1_555
A
ASP
224
A
ASP
208
3
1_555
B
DT
16
B
DT
16
3
1_555
D
DA
17
D
DA
17
3
1_555
E
ASP
125
E
ASP
109
5
1_555
E
GLY
126
E
GLY
110
5
1_555
E
GLU
435
E
GLU
419
5
1_555
H
DG
16
H
DG
16
5
1_555
H
DA
17
H
DA
17
5
1_555
E
ASP
224
E
ASP
208
3
1_555
F
DT
16
F
DT
16
3
1_555
H
DA
17
H
DA
17
3
1_555
1
P 1