0.025336
0.014628
0.000000
-0.000000
0.029255
0.000000
0.000000
-0.000000
0.003061
0.000000
0.000000
0.000000
0000-0002-7332-8889
Dokurno, P.
0000-0002-9385-806X
Szlavik, Z.
Ondi, L.
0000-0002-5781-1096
Csekei, M.
Paczal, A.
0000-0001-7557-0305
Szabo, Z.B.
0000-0003-4954-3025
Radics, G.
0000-0003-1007-8218
Murray, J.
0000-0002-8301-1607
Davidson, J.
Chen, I.
0000-0001-6759-7575
Davis, B.
0000-0002-8233-7461
Hubbard, R.E.
Pedder, C.
Surgenor, A.E.
Smith, J.
Robertson, A.
LeToumelin-Braizat, G.
Cauquil, N.
Zarka, M.
Demarles, D.
Perron-Sierra, F.
Geneste, O.
0000-0002-7675-3864
Kotschy, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
39.470
39.470
326.644
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C24 H21 Cl N2 O4 S
468.953
(2~{R})-2-[5-(3-chloranyl-2-methyl-4-oxidanyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
Y
183
N
C
Y
184
N
C
N
185
N
C
N
186
N
C
Y
187
N
C
Y
188
N
C
Y
189
N
C
Y
190
N
C
Y
191
N
C
Y
192
N
C
Y
193
N
C
Y
194
N
C
Y
195
N
C
Y
196
N
C
N
197
N
C
Y
198
N
C
N
199
N
CL
Y
200
N
C
N
201
N
O
Y
202
N
C
N
203
N
C
Y
204
N
S
Y
205
N
N
Y
206
N
N
Y
207
N
C
N
208
N
O
N
209
R
C
N
210
N
C
N
211
N
O
N
212
N
O
Y
213
N
C
Y
214
N
C
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
N
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
S
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
N
348
N
O
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
R
C
N
362
N
O
N
363
N
C
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
N
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
N
412
N
O
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
N
N
426
S
C
N
427
N
C
N
428
N
O
N
429
N
C
N
430
N
C
N
431
N
C
N
432
N
O
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
doub
Y
174
N
sing
Y
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
doub
Y
180
N
doub
Y
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
Y
185
N
sing
Y
186
N
doub
N
187
N
sing
Y
188
N
doub
Y
189
N
sing
N
190
N
sing
N
191
N
sing
Y
192
N
doub
Y
193
N
sing
N
194
N
sing
Y
195
N
doub
Y
196
N
sing
N
197
N
sing
Y
198
N
sing
Y
199
N
sing
Y
200
N
doub
Y
201
N
doub
Y
202
N
doub
N
203
N
sing
Y
204
N
sing
N
205
N
sing
Y
206
N
sing
Y
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
doub
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
62
6913
6924
10.1021/acs.jmedchem.9b00134
31339316
Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.
2019
10.2210/pdb6qz8/pdb
pdb_00006qz8
100
1
N
CCD
2010-06-16
ADSC QUANTUM 315r
Mirrors
SINGLE WAVELENGTH
M
x-ray
1
0.9762
1.0
ID23-1
ESRF
0.9762
SYNCHROTRON
ESRF BEAMLINE ID23-1
19493.154
Induced myeloid leukemia cell differentiation protein Mcl-1
1
man
polymer
468.953
(2~{R})-2-[5-(3-chloranyl-2-methyl-4-oxidanyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid
1
syn
non-polymer
18.015
water
41
nat
water
Bcl-2-like protein 3,Bcl2-L-3,Bcl-2-related protein EAT/mcl1,mcl1/EAT
no
no
MHHHHHHLVPRGSEDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDI
KNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVE
FFHVEDLEGG
MHHHHHHLVPRGSEDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDI
KNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVE
FFHVEDLEGG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
170
MCL1, BCL2L3
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
pLysS
Biological sequence
1
1.88
34.71
VAPOR DIFFUSION, SITTING DROP
6.5
0.05M BIS-TRIS pH 6.5, 30% v/v Pentaerythritol ethoxylate (15/4 EO/OH), 0.05M Ammonium Sulphate
293
citation
citation_author
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Refinement description
Data collection
Database references
Refinement description
1
0
2019-08-07
1
1
2019-08-21
1
2
2019-09-18
1
3
2024-01-24
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation_author.identifier_ORCID
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
PDBE
Y
PDBE
2019-03-11
REL
REL
1
A
O
HOH
541
7.23
JL8
JL8
SUBJECT OF INVESTIGATION
JL8
(2~{R})-2-[5-(3-chloranyl-2-methyl-4-oxidanyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid
HOH
water
6QFQ
PDB
experimental model
8BS
401
2
JL8
JL8
401
A
HOH
30
3
HOH
HOH
501
A
HOH
32
3
HOH
HOH
502
A
HOH
41
3
HOH
HOH
503
A
HOH
8
3
HOH
HOH
504
A
HOH
28
3
HOH
HOH
505
A
HOH
39
3
HOH
HOH
506
A
HOH
23
3
HOH
HOH
507
A
HOH
2
3
HOH
HOH
508
A
HOH
16
3
HOH
HOH
509
A
HOH
10
3
HOH
HOH
510
A
HOH
15
3
HOH
HOH
511
A
HOH
13
3
HOH
HOH
512
A
HOH
5
3
HOH
HOH
513
A
HOH
29
3
HOH
HOH
514
A
HOH
17
3
HOH
HOH
515
A
HOH
36
3
HOH
HOH
516
A
HOH
7
3
HOH
HOH
517
A
HOH
18
3
HOH
HOH
518
A
HOH
19
3
HOH
HOH
519
A
HOH
4
3
HOH
HOH
520
A
HOH
24
3
HOH
HOH
521
A
HOH
14
3
HOH
HOH
522
A
HOH
1
3
HOH
HOH
523
A
HOH
6
3
HOH
HOH
524
A
HOH
33
3
HOH
HOH
525
A
HOH
3
3
HOH
HOH
526
A
HOH
9
3
HOH
HOH
527
A
HOH
31
3
HOH
HOH
528
A
HOH
11
3
HOH
HOH
529
A
HOH
12
3
HOH
HOH
530
A
HOH
21
3
HOH
HOH
531
A
HOH
42
3
HOH
HOH
532
A
HOH
26
3
HOH
HOH
533
A
HOH
27
3
HOH
HOH
534
A
HOH
34
3
HOH
HOH
535
A
HOH
25
3
HOH
HOH
536
A
HOH
40
3
HOH
HOH
537
A
HOH
38
3
HOH
HOH
538
A
HOH
22
3
HOH
HOH
539
A
HOH
35
3
HOH
HOH
540
A
HOH
37
3
HOH
HOH
541
A
n
1
158
A
n
2
159
A
n
3
160
A
n
4
161
A
n
5
162
A
n
6
163
A
n
7
164
A
n
8
165
A
n
9
166
A
n
10
167
A
n
11
168
A
n
12
169
A
SER
170
n
13
SER
170
A
GLU
171
n
14
GLU
171
A
ASP
172
n
15
ASP
172
A
GLU
173
n
16
GLU
173
A
LEU
174
n
17
LEU
174
A
TYR
175
n
18
TYR
175
A
ARG
176
n
19
ARG
176
A
GLN
177
n
20
GLN
177
A
SER
178
n
21
SER
178
A
LEU
179
n
22
LEU
179
A
GLU
180
n
23
GLU
180
A
ILE
181
n
24
ILE
181
A
ILE
182
n
25
ILE
182
A
SER
183
n
26
SER
183
A
ARG
184
n
27
ARG
184
A
TYR
185
n
28
TYR
185
A
LEU
186
n
29
LEU
186
A
ARG
187
n
30
ARG
187
A
GLU
188
n
31
GLU
188
A
GLN
189
n
32
GLN
189
A
ALA
190
n
33
ALA
190
A
THR
191
n
34
THR
191
A
GLY
192
n
35
GLY
192
A
ALA
193
n
36
ALA
193
A
LYS
194
n
37
LYS
194
A
ASP
195
n
38
ASP
195
A
THR
196
n
39
THR
196
A
LYS
197
n
40
LYS
197
A
PRO
198
n
41
PRO
198
A
MET
199
n
42
MET
199
A
GLY
200
n
43
GLY
200
A
ARG
201
n
44
ARG
201
A
SER
202
n
45
SER
202
A
GLY
203
n
46
GLY
203
A
ALA
204
n
47
ALA
204
A
THR
205
n
48
THR
205
A
SER
206
n
49
SER
206
A
ARG
207
n
50
ARG
207
A
LYS
208
n
51
LYS
208
A
ALA
209
n
52
ALA
209
A
LEU
210
n
53
LEU
210
A
GLU
211
n
54
GLU
211
A
THR
212
n
55
THR
212
A
LEU
213
n
56
LEU
213
A
ARG
214
n
57
ARG
214
A
ARG
215
n
58
ARG
215
A
VAL
216
n
59
VAL
216
A
GLY
217
n
60
GLY
217
A
ASP
218
n
61
ASP
218
A
GLY
219
n
62
GLY
219
A
VAL
220
n
63
VAL
220
A
GLN
221
n
64
GLN
221
A
ARG
222
n
65
ARG
222
A
ASN
223
n
66
ASN
223
A
HIS
224
n
67
HIS
224
A
GLU
225
n
68
GLU
225
A
THR
226
n
69
THR
226
A
ALA
227
n
70
ALA
227
A
PHE
228
n
71
PHE
228
A
GLN
229
n
72
GLN
229
A
GLY
230
n
73
GLY
230
A
MET
231
n
74
MET
231
A
LEU
232
n
75
LEU
232
A
ARG
233
n
76
ARG
233
A
LYS
234
n
77
LYS
234
A
LEU
235
n
78
LEU
235
A
ASP
236
n
79
ASP
236
A
ILE
237
n
80
ILE
237
A
LYS
238
n
81
LYS
238
A
ASN
239
n
82
ASN
239
A
GLU
240
n
83
GLU
240
A
ASP
241
n
84
ASP
241
A
ASP
242
n
85
ASP
242
A
VAL
243
n
86
VAL
243
A
LYS
244
n
87
LYS
244
A
SER
245
n
88
SER
245
A
LEU
246
n
89
LEU
246
A
SER
247
n
90
SER
247
A
ARG
248
n
91
ARG
248
A
VAL
249
n
92
VAL
249
A
MET
250
n
93
MET
250
A
ILE
251
n
94
ILE
251
A
HIS
252
n
95
HIS
252
A
VAL
253
n
96
VAL
253
A
PHE
254
n
97
PHE
254
A
SER
255
n
98
SER
255
A
ASP
256
n
99
ASP
256
A
GLY
257
n
100
GLY
257
A
VAL
258
n
101
VAL
258
A
THR
259
n
102
THR
259
A
ASN
260
n
103
ASN
260
A
TRP
261
n
104
TRP
261
A
GLY
262
n
105
GLY
262
A
ARG
263
n
106
ARG
263
A
ILE
264
n
107
ILE
264
A
VAL
265
n
108
VAL
265
A
THR
266
n
109
THR
266
A
LEU
267
n
110
LEU
267
A
ILE
268
n
111
ILE
268
A
SER
269
n
112
SER
269
A
PHE
270
n
113
PHE
270
A
GLY
271
n
114
GLY
271
A
ALA
272
n
115
ALA
272
A
PHE
273
n
116
PHE
273
A
VAL
274
n
117
VAL
274
A
ALA
275
n
118
ALA
275
A
LYS
276
n
119
LYS
276
A
HIS
277
n
120
HIS
277
A
LEU
278
n
121
LEU
278
A
LYS
279
n
122
LYS
279
A
THR
280
n
123
THR
280
A
ILE
281
n
124
ILE
281
A
ASN
282
n
125
ASN
282
A
GLN
283
n
126
GLN
283
A
GLU
284
n
127
GLU
284
A
SER
285
n
128
SER
285
A
CYS
286
n
129
CYS
286
A
ILE
287
n
130
ILE
287
A
GLU
288
n
131
GLU
288
A
PRO
289
n
132
PRO
289
A
LEU
290
n
133
LEU
290
A
ALA
291
n
134
ALA
291
A
GLU
292
n
135
GLU
292
A
SER
293
n
136
SER
293
A
ILE
294
n
137
ILE
294
A
THR
295
n
138
THR
295
A
ASP
296
n
139
ASP
296
A
VAL
297
n
140
VAL
297
A
LEU
298
n
141
LEU
298
A
VAL
299
n
142
VAL
299
A
ARG
300
n
143
ARG
300
A
THR
301
n
144
THR
301
A
LYS
302
n
145
LYS
302
A
ARG
303
n
146
ARG
303
A
ASP
304
n
147
ASP
304
A
TRP
305
n
148
TRP
305
A
LEU
306
n
149
LEU
306
A
VAL
307
n
150
VAL
307
A
LYS
308
n
151
LYS
308
A
GLN
309
n
152
GLN
309
A
ARG
310
n
153
ARG
310
A
GLY
311
n
154
GLY
311
A
TRP
312
n
155
TRP
312
A
ASP
313
n
156
ASP
313
A
GLY
314
n
157
GLY
314
A
PHE
315
n
158
PHE
315
A
VAL
316
n
159
VAL
316
A
GLU
317
n
160
GLU
317
A
PHE
318
n
161
PHE
318
A
PHE
319
n
162
PHE
319
A
HIS
320
n
163
HIS
320
A
VAL
321
n
164
VAL
321
A
GLU
322
n
165
GLU
322
A
n
166
323
A
n
167
324
A
n
168
325
A
n
169
326
A
n
170
327
A
author_defined_assembly
1
monomeric
gel filtration
0
0
7850
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HOH
505
C
HOH
1
A
CG
LYS
197
A
CG
LYS
40
1
Y
1
A
CD
LYS
197
A
CD
LYS
40
1
Y
1
A
CE
LYS
197
A
CE
LYS
40
1
Y
1
A
NZ
LYS
197
A
NZ
LYS
40
1
Y
1
A
CG
ARG
201
A
CG
ARG
44
1
Y
1
A
CD
ARG
201
A
CD
ARG
44
1
Y
1
A
NE
ARG
201
A
NE
ARG
44
1
Y
1
A
CZ
ARG
201
A
CZ
ARG
44
1
Y
1
A
NH1
ARG
201
A
NH1
ARG
44
1
Y
1
A
NH2
ARG
201
A
NH2
ARG
44
1
Y
1
A
CG
GLU
240
A
CG
GLU
83
1
Y
1
A
CD
GLU
240
A
CD
GLU
83
1
Y
1
A
OE1
GLU
240
A
OE1
GLU
83
1
Y
1
A
OE2
GLU
240
A
OE2
GLU
83
1
Y
1
A
CG
ASP
241
A
CG
ASP
84
1
Y
1
A
OD1
ASP
241
A
OD1
ASP
84
1
Y
1
A
OD2
ASP
241
A
OD2
ASP
84
1
Y
1
A
CG
LYS
244
A
CG
LYS
87
1
Y
1
A
CD
LYS
244
A
CD
LYS
87
1
Y
1
A
CE
LYS
244
A
CE
LYS
87
1
Y
1
A
NZ
LYS
244
A
NZ
LYS
87
1
Y
1
A
CG
ARG
248
A
CG
ARG
91
1
Y
1
A
CD
ARG
248
A
CD
ARG
91
1
Y
1
A
NE
ARG
248
A
NE
ARG
91
1
Y
1
A
CZ
ARG
248
A
CZ
ARG
91
1
Y
1
A
NH1
ARG
248
A
NH1
ARG
91
1
Y
1
A
NH2
ARG
248
A
NH2
ARG
91
1
Y
1
A
CG
HIS
320
A
CG
HIS
163
1
Y
1
A
ND1
HIS
320
A
ND1
HIS
163
1
Y
1
A
CD2
HIS
320
A
CD2
HIS
163
1
Y
1
A
CE1
HIS
320
A
CE1
HIS
163
1
Y
1
A
NE2
HIS
320
A
NE2
HIS
163
1
Y
1
A
MET
158
A
MET
1
1
Y
1
A
HIS
159
A
HIS
2
1
Y
1
A
HIS
160
A
HIS
3
1
Y
1
A
HIS
161
A
HIS
4
1
Y
1
A
HIS
162
A
HIS
5
1
Y
1
A
HIS
163
A
HIS
6
1
Y
1
A
HIS
164
A
HIS
7
1
Y
1
A
LEU
165
A
LEU
8
1
Y
1
A
VAL
166
A
VAL
9
1
Y
1
A
PRO
167
A
PRO
10
1
Y
1
A
ARG
168
A
ARG
11
1
Y
1
A
GLY
169
A
GLY
12
1
Y
1
A
ASP
323
A
ASP
166
1
Y
1
A
LEU
324
A
LEU
167
1
Y
1
A
GLU
325
A
GLU
168
1
Y
1
A
GLY
326
A
GLY
169
1
Y
1
A
GLY
327
A
GLY
170
1
Y
1
A
A
O
O
SER
THR
170
301
2.06
1_555
12_554
1
A
A
O
O
HOH
HOH
535
536
2.11
1_555
8_555
1
A
VAL
258
-59.95
171.23
1
A
ARG
310
77.21
31.65
122.000
42.3640
21.410
0.1300
0.0600
0.0000
0.1300
-0.0000
-0.4200
0.9510
0.9040
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.2864
0.2037
0.2072
2.1500
9.9400
437
8545
4.9000
97.3300
5.8000
0.1520
0.2745
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.2740
0.2440
0.8000
0.8000
1.2000
6qfq
2.1500
9.9400
41
1273
30.71
47.75
32
0
1200
153
0.009
0.013
1261
0.001
0.018
1169
1.575
1.682
1705
1.349
1.595
2666
5.059
5.000
154
32.651
21.000
70
17.975
15.000
220
26.098
15.000
12
0.078
0.200
163
0.007
0.020
1415
0.001
0.020
278
0.2870
0.0000
0.2380
2.2600
65
1144
1209
10
98.7700
2.12
32.7
6QZ8
9561
0.051
1
22.5
8.5
99.2
0.123
2.12
2.24
8.9
1
8.0
99.0
data reduction
MOSFLM
3.3.16
refinement
REFMAC
5.8.0238
data extraction
PDB_EXTRACT
3.24
data scaling
SCALA
phasing
MOLREP
N
Structure of Mcl-1 in complex with compound 10d
1
N
N
2
N
N
3
N
N
A
ASP
172
A
ASP
15
HELX_P
A
GLY
192
A
GLY
35
1
AA1
21
A
SER
202
A
SER
45
HELX_P
A
HIS
224
A
HIS
67
1
AA2
23
A
HIS
224
A
HIS
67
HELX_P
A
ASP
236
A
ASP
79
1
AA3
13
A
ASN
239
A
ASN
82
HELX_P
A
GLY
257
A
GLY
100
1
AA4
19
A
ASN
260
A
ASN
103
HELX_P
A
ILE
281
A
ILE
124
1
AA5
22
A
GLN
283
A
GLN
126
HELX_P
A
SER
285
A
SER
128
5
AA6
3
A
CYS
286
A
CYS
129
HELX_P
A
GLN
309
A
GLN
152
1
AA7
24
A
ARG
310
A
ARG
153
HELX_P
A
PHE
319
A
PHE
162
1
AA8
10
APOPTOSIS
Apoptosis-inhibitor complex, Mcl1, Small molecule inhibitor, APOPTOSIS
MCL1_HUMAN
UNP
1
171
Q07820
EDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM
IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
171
327
6QZ8
171
327
Q07820
A
1
14
170
1
initiating methionine
MET
158
6QZ8
A
Q07820
UNP
1
1
expression tag
HIS
159
6QZ8
A
Q07820
UNP
2
1
expression tag
HIS
160
6QZ8
A
Q07820
UNP
3
1
expression tag
HIS
161
6QZ8
A
Q07820
UNP
4
1
expression tag
HIS
162
6QZ8
A
Q07820
UNP
5
1
expression tag
HIS
163
6QZ8
A
Q07820
UNP
6
1
expression tag
HIS
164
6QZ8
A
Q07820
UNP
7
1
expression tag
LEU
165
6QZ8
A
Q07820
UNP
8
1
expression tag
VAL
166
6QZ8
A
Q07820
UNP
9
1
expression tag
PRO
167
6QZ8
A
Q07820
UNP
10
1
expression tag
ARG
168
6QZ8
A
Q07820
UNP
11
1
expression tag
GLY
169
6QZ8
A
Q07820
UNP
12
1
expression tag
SER
170
6QZ8
A
Q07820
UNP
13
binding site for residue JL8 A 401
A
JL8
401
Software
11
A
HIS
224
A
HIS
67
11
8_555
A
ALA
227
A
ALA
70
11
1_555
A
MET
231
A
MET
74
11
1_555
A
VAL
249
A
VAL
92
11
1_555
A
ARG
263
A
ARG
106
11
1_555
A
THR
266
A
THR
109
11
1_555
A
LEU
267
A
LEU
110
11
1_555
A
HOH
505
C
HOH
11
8_555
A
HOH
505
C
HOH
11
1_555
A
HOH
521
C
HOH
11
1_555
A
HOH
523
C
HOH
11
1_555
179
P 65 2 2