0.026139 0.000000 0.007824 0.000000 0.023134 0.000000 0.000000 0.000000 0.022756 0.00000 0.00000 0.00000 Arnoux, P. Siponen, M.I. Pignol, D. Brandelet, G. De Groot, A. Blanchard, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 106.66 90.00 38.257 43.227 45.870 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N C N 124 N O N 125 N C N 126 N O N 127 N C N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C N 255 N C N 256 N C N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C N 272 N O N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 R C N 286 N O N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C Y 303 N C Y 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C N 309 N O N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C N 327 N C N 328 N C N 329 N O N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing Y 294 N doub Y 295 N sing Y 296 N sing N 297 N sing Y 298 N doub N 299 N sing Y 300 N doub N 301 N sing Y 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing UK Nucleic Acids Res. NARHAD 0389 1362-4962 47 11403 11417 10.1093/nar/gkz883 31598697 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. 2019 10.2210/pdb6rnz/pdb pdb_00006rnz 100 1 N PIXEL 2016-07-21 DECTRIS PILATUS3 2M SINGLE WAVELENGTH M x-ray 1 0.9660 1.0 MASSIF-1 ESRF 0.9660 SYNCHROTRON ESRF BEAMLINE MASSIF-1 7512.542 HTH-type transcriptional regulator DdrOC N-terminus 2 man polymer 92.094 GLYCEROL 3 syn non-polymer 18.015 water 255 nat water no no MKLHERLRELRSERGLRLKDVAEVAQISVPYLSDLERGRTNPSLETLQTLAGAYNITVHDLLEGVE MKLHERLRELRSERGLRLKDVAEVAQISVPYLSDLERGRTNPSLETLQTLAGAYNITVHDLLEGVE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 66 ddrOC, Deide_20570 310783 Deinococcus deserti 866768 Escherichia coli 'BL21-Gold(DE3)pLysS AG' Biological sequence 1 2.42 49.14 VAPOR DIFFUSION, SITTING DROP 0.1 M Bis-Tris propane pH 7, 2.5 M Ammonium Sulfate 293 citation citation_author citation chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model refine software repository Initial release Data collection Database references Database references Data collection Database references Refinement description 1 0 2019-10-09 1 1 2019-10-23 1 2 2019-12-04 1 3 2024-01-24 _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _citation.journal_volume _citation.page_first _citation.page_last _database_2.pdbx_DOI _database_2.pdbx_database_accession _refine.pdbx_diffrn_id _software.name Contains the full-length protein Contains the full-length seleno-methionine labelled protein N PDBE Y PDBE 2019-05-10 REL REL 1 A O HOH 321 5.92 1 A O HOH 322 5.95 1 A O HOH 323 6.31 1 A O HOH 324 6.88 1 B O HOH 228 6.12 1 B O HOH 229 6.14 1 B O HOH 230 6.86 1 B O HOH 231 6.88 GOL GLYCEROL HOH water 6RNX PDB experimental model GOL 100 2 GOL GOL 100 A GOL 101 2 GOL GOL 101 A GOL 102 2 GOL GOL 102 A HOH 227 3 HOH HOH 201 A HOH 138 3 HOH HOH 202 A HOH 232 3 HOH HOH 203 A HOH 28 3 HOH HOH 204 A HOH 173 3 HOH HOH 205 A HOH 50 3 HOH HOH 206 A HOH 240 3 HOH HOH 207 A HOH 241 3 HOH HOH 208 A HOH 199 3 HOH HOH 209 A HOH 225 3 HOH HOH 210 A HOH 3 3 HOH HOH 211 A HOH 223 3 HOH HOH 212 A HOH 235 3 HOH HOH 213 A HOH 41 3 HOH HOH 214 A HOH 9 3 HOH HOH 215 A HOH 213 3 HOH HOH 216 A HOH 194 3 HOH HOH 217 A HOH 18 3 HOH HOH 218 A HOH 52 3 HOH HOH 219 A HOH 137 3 HOH HOH 220 A HOH 226 3 HOH HOH 221 A HOH 152 3 HOH HOH 222 A HOH 243 3 HOH HOH 223 A HOH 92 3 HOH HOH 224 A HOH 146 3 HOH HOH 225 A HOH 4 3 HOH HOH 226 A HOH 182 3 HOH HOH 227 A HOH 141 3 HOH HOH 228 A HOH 22 3 HOH HOH 229 A HOH 125 3 HOH HOH 230 A HOH 198 3 HOH HOH 231 A HOH 239 3 HOH HOH 232 A HOH 118 3 HOH HOH 233 A HOH 17 3 HOH HOH 234 A HOH 80 3 HOH HOH 235 A HOH 43 3 HOH HOH 236 A HOH 224 3 HOH HOH 237 A HOH 169 3 HOH HOH 238 A HOH 37 3 HOH HOH 239 A HOH 111 3 HOH HOH 240 A HOH 185 3 HOH HOH 241 A HOH 249 3 HOH HOH 242 A HOH 67 3 HOH HOH 243 A HOH 25 3 HOH HOH 244 A HOH 149 3 HOH HOH 245 A HOH 86 3 HOH HOH 246 A HOH 66 3 HOH HOH 247 A HOH 162 3 HOH HOH 248 A HOH 110 3 HOH HOH 249 A HOH 181 3 HOH HOH 250 A HOH 200 3 HOH HOH 251 A HOH 164 3 HOH HOH 252 A HOH 64 3 HOH HOH 253 A HOH 69 3 HOH HOH 254 A HOH 221 3 HOH HOH 255 A HOH 150 3 HOH HOH 256 A HOH 210 3 HOH HOH 257 A HOH 214 3 HOH HOH 258 A HOH 32 3 HOH HOH 259 A HOH 218 3 HOH HOH 260 A HOH 196 3 HOH HOH 261 A HOH 46 3 HOH HOH 262 A HOH 51 3 HOH HOH 263 A HOH 128 3 HOH HOH 264 A HOH 63 3 HOH HOH 265 A HOH 8 3 HOH HOH 266 A HOH 195 3 HOH HOH 267 A HOH 211 3 HOH HOH 268 A HOH 191 3 HOH HOH 269 A HOH 76 3 HOH HOH 270 A HOH 33 3 HOH HOH 271 A HOH 47 3 HOH HOH 272 A HOH 13 3 HOH HOH 273 A HOH 179 3 HOH HOH 274 A HOH 53 3 HOH HOH 275 A HOH 244 3 HOH HOH 276 A HOH 101 3 HOH HOH 277 A HOH 167 3 HOH HOH 278 A HOH 233 3 HOH HOH 279 A HOH 130 3 HOH HOH 280 A HOH 14 3 HOH HOH 281 A HOH 201 3 HOH HOH 282 A HOH 109 3 HOH HOH 283 A HOH 104 3 HOH HOH 284 A HOH 156 3 HOH HOH 285 A HOH 107 3 HOH HOH 286 A HOH 143 3 HOH HOH 287 A HOH 135 3 HOH HOH 288 A HOH 42 3 HOH HOH 289 A HOH 96 3 HOH HOH 290 A HOH 126 3 HOH HOH 291 A HOH 93 3 HOH HOH 292 A HOH 145 3 HOH HOH 293 A HOH 87 3 HOH HOH 294 A HOH 139 3 HOH HOH 295 A HOH 197 3 HOH HOH 296 A HOH 189 3 HOH HOH 297 A HOH 97 3 HOH HOH 298 A HOH 81 3 HOH HOH 299 A HOH 159 3 HOH HOH 300 A HOH 188 3 HOH HOH 301 A HOH 121 3 HOH HOH 302 A HOH 252 3 HOH HOH 303 A HOH 144 3 HOH HOH 304 A HOH 103 3 HOH HOH 305 A HOH 157 3 HOH HOH 306 A HOH 7 3 HOH HOH 307 A HOH 116 3 HOH HOH 308 A HOH 62 3 HOH HOH 309 A HOH 245 3 HOH HOH 310 A HOH 54 3 HOH HOH 311 A HOH 95 3 HOH HOH 312 A HOH 127 3 HOH HOH 313 A HOH 219 3 HOH HOH 314 A HOH 82 3 HOH HOH 315 A HOH 129 3 HOH HOH 316 A HOH 154 3 HOH HOH 317 A HOH 131 3 HOH HOH 318 A HOH 247 3 HOH HOH 319 A HOH 85 3 HOH HOH 320 A HOH 163 3 HOH HOH 321 A HOH 254 3 HOH HOH 322 A HOH 192 3 HOH HOH 323 A HOH 248 3 HOH HOH 324 A HOH 114 3 HOH HOH 101 B HOH 209 3 HOH HOH 102 B HOH 48 3 HOH HOH 103 B HOH 174 3 HOH HOH 104 B HOH 98 3 HOH HOH 105 B HOH 71 3 HOH HOH 106 B HOH 230 3 HOH HOH 107 B HOH 231 3 HOH HOH 108 B HOH 89 3 HOH HOH 109 B HOH 234 3 HOH HOH 110 B HOH 6 3 HOH HOH 111 B HOH 132 3 HOH HOH 112 B HOH 57 3 HOH HOH 113 B HOH 1 3 HOH HOH 114 B HOH 153 3 HOH HOH 115 B HOH 70 3 HOH HOH 116 B HOH 177 3 HOH HOH 117 B HOH 147 3 HOH HOH 118 B HOH 68 3 HOH HOH 119 B HOH 88 3 HOH HOH 120 B HOH 113 3 HOH HOH 121 B HOH 133 3 HOH HOH 122 B HOH 11 3 HOH HOH 123 B HOH 171 3 HOH HOH 124 B HOH 24 3 HOH HOH 125 B HOH 238 3 HOH HOH 126 B HOH 10 3 HOH HOH 127 B HOH 5 3 HOH HOH 128 B HOH 36 3 HOH HOH 129 B HOH 142 3 HOH HOH 130 B HOH 19 3 HOH HOH 131 B HOH 94 3 HOH HOH 132 B HOH 112 3 HOH HOH 133 B HOH 228 3 HOH HOH 134 B HOH 12 3 HOH HOH 135 B HOH 15 3 HOH HOH 136 B HOH 222 3 HOH HOH 137 B HOH 55 3 HOH HOH 138 B HOH 136 3 HOH HOH 139 B HOH 27 3 HOH HOH 140 B HOH 178 3 HOH HOH 141 B HOH 140 3 HOH HOH 142 B HOH 61 3 HOH HOH 143 B HOH 102 3 HOH HOH 144 B HOH 78 3 HOH HOH 145 B HOH 151 3 HOH HOH 146 B HOH 29 3 HOH HOH 147 B HOH 39 3 HOH HOH 148 B HOH 23 3 HOH HOH 149 B HOH 16 3 HOH HOH 150 B HOH 180 3 HOH HOH 151 B HOH 122 3 HOH HOH 152 B HOH 176 3 HOH HOH 153 B HOH 2 3 HOH HOH 154 B HOH 158 3 HOH HOH 155 B HOH 35 3 HOH HOH 156 B HOH 65 3 HOH HOH 157 B HOH 120 3 HOH HOH 158 B HOH 90 3 HOH HOH 159 B HOH 166 3 HOH HOH 160 B HOH 190 3 HOH HOH 161 B HOH 202 3 HOH HOH 162 B HOH 208 3 HOH HOH 163 B HOH 40 3 HOH HOH 164 B HOH 38 3 HOH HOH 165 B HOH 31 3 HOH HOH 166 B HOH 106 3 HOH HOH 167 B HOH 124 3 HOH HOH 168 B HOH 123 3 HOH HOH 169 B HOH 220 3 HOH HOH 170 B HOH 30 3 HOH HOH 171 B HOH 20 3 HOH HOH 172 B HOH 44 3 HOH HOH 173 B HOH 216 3 HOH HOH 174 B HOH 75 3 HOH HOH 175 B HOH 45 3 HOH HOH 176 B HOH 134 3 HOH HOH 177 B HOH 212 3 HOH HOH 178 B HOH 83 3 HOH HOH 179 B HOH 242 3 HOH HOH 180 B HOH 193 3 HOH HOH 181 B HOH 60 3 HOH HOH 182 B HOH 175 3 HOH HOH 183 B HOH 205 3 HOH HOH 184 B HOH 72 3 HOH HOH 185 B HOH 168 3 HOH HOH 186 B HOH 49 3 HOH HOH 187 B HOH 26 3 HOH HOH 188 B HOH 237 3 HOH HOH 189 B HOH 100 3 HOH HOH 190 B HOH 99 3 HOH HOH 191 B HOH 79 3 HOH HOH 192 B HOH 183 3 HOH HOH 193 B HOH 115 3 HOH HOH 194 B HOH 74 3 HOH HOH 195 B HOH 56 3 HOH HOH 196 B HOH 34 3 HOH HOH 197 B HOH 172 3 HOH HOH 198 B HOH 203 3 HOH HOH 199 B HOH 21 3 HOH HOH 200 B HOH 161 3 HOH HOH 201 B HOH 59 3 HOH HOH 202 B HOH 250 3 HOH HOH 203 B HOH 91 3 HOH HOH 204 B HOH 184 3 HOH HOH 205 B HOH 117 3 HOH HOH 206 B HOH 119 3 HOH HOH 207 B HOH 187 3 HOH HOH 208 B HOH 108 3 HOH HOH 209 B HOH 236 3 HOH HOH 210 B HOH 58 3 HOH HOH 211 B HOH 186 3 HOH HOH 212 B HOH 170 3 HOH HOH 213 B HOH 77 3 HOH HOH 214 B HOH 155 3 HOH HOH 215 B HOH 105 3 HOH HOH 216 B HOH 215 3 HOH HOH 217 B HOH 148 3 HOH HOH 218 B HOH 229 3 HOH HOH 219 B HOH 160 3 HOH HOH 220 B HOH 73 3 HOH HOH 221 B HOH 251 3 HOH HOH 222 B HOH 84 3 HOH HOH 223 B HOH 255 3 HOH HOH 224 B HOH 217 3 HOH HOH 225 B HOH 204 3 HOH HOH 226 B HOH 246 3 HOH HOH 227 B HOH 253 3 HOH HOH 228 B HOH 165 3 HOH HOH 229 B HOH 207 3 HOH HOH 230 B HOH 206 3 HOH HOH 231 B MET 1 n 1 MET 1 A LYS 2 n 2 LYS 2 A LEU 3 n 3 LEU 3 A HIS 4 n 4 HIS 4 A GLU 5 n 5 GLU 5 A ARG 6 n 6 ARG 6 A LEU 7 n 7 LEU 7 A ARG 8 n 8 ARG 8 A GLU 9 n 9 GLU 9 A LEU 10 n 10 LEU 10 A ARG 11 n 11 ARG 11 A SER 12 n 12 SER 12 A GLU 13 n 13 GLU 13 A ARG 14 n 14 ARG 14 A GLY 15 n 15 GLY 15 A LEU 16 n 16 LEU 16 A ARG 17 n 17 ARG 17 A LEU 18 n 18 LEU 18 A LYS 19 n 19 LYS 19 A ASP 20 n 20 ASP 20 A VAL 21 n 21 VAL 21 A ALA 22 n 22 ALA 22 A GLU 23 n 23 GLU 23 A VAL 24 n 24 VAL 24 A ALA 25 n 25 ALA 25 A GLN 26 n 26 GLN 26 A ILE 27 n 27 ILE 27 A SER 28 n 28 SER 28 A VAL 29 n 29 VAL 29 A PRO 30 n 30 PRO 30 A TYR 31 n 31 TYR 31 A LEU 32 n 32 LEU 32 A SER 33 n 33 SER 33 A ASP 34 n 34 ASP 34 A LEU 35 n 35 LEU 35 A GLU 36 n 36 GLU 36 A ARG 37 n 37 ARG 37 A GLY 38 n 38 GLY 38 A ARG 39 n 39 ARG 39 A THR 40 n 40 THR 40 A ASN 41 n 41 ASN 41 A PRO 42 n 42 PRO 42 A SER 43 n 43 SER 43 A LEU 44 n 44 LEU 44 A GLU 45 n 45 GLU 45 A THR 46 n 46 THR 46 A LEU 47 n 47 LEU 47 A GLN 48 n 48 GLN 48 A THR 49 n 49 THR 49 A LEU 50 n 50 LEU 50 A ALA 51 n 51 ALA 51 A GLY 52 n 52 GLY 52 A ALA 53 n 53 ALA 53 A TYR 54 n 54 TYR 54 A ASN 55 n 55 ASN 55 A ILE 56 n 56 ILE 56 A THR 57 n 57 THR 57 A VAL 58 n 58 VAL 58 A HIS 59 n 59 HIS 59 A ASP 60 n 60 ASP 60 A LEU 61 n 61 LEU 61 A LEU 62 n 62 LEU 62 A GLU 63 n 63 GLU 63 A GLY 64 n 64 GLY 64 A VAL 65 n 65 VAL 65 A GLU 66 n 66 GLU 66 A MET 1 n 1 MET 1 B LYS 2 n 2 LYS 2 B LEU 3 n 3 LEU 3 B HIS 4 n 4 HIS 4 B GLU 5 n 5 GLU 5 B ARG 6 n 6 ARG 6 B LEU 7 n 7 LEU 7 B ARG 8 n 8 ARG 8 B GLU 9 n 9 GLU 9 B LEU 10 n 10 LEU 10 B ARG 11 n 11 ARG 11 B SER 12 n 12 SER 12 B GLU 13 n 13 GLU 13 B ARG 14 n 14 ARG 14 B GLY 15 n 15 GLY 15 B LEU 16 n 16 LEU 16 B ARG 17 n 17 ARG 17 B LEU 18 n 18 LEU 18 B LYS 19 n 19 LYS 19 B ASP 20 n 20 ASP 20 B VAL 21 n 21 VAL 21 B ALA 22 n 22 ALA 22 B GLU 23 n 23 GLU 23 B VAL 24 n 24 VAL 24 B ALA 25 n 25 ALA 25 B GLN 26 n 26 GLN 26 B ILE 27 n 27 ILE 27 B SER 28 n 28 SER 28 B VAL 29 n 29 VAL 29 B PRO 30 n 30 PRO 30 B TYR 31 n 31 TYR 31 B LEU 32 n 32 LEU 32 B SER 33 n 33 SER 33 B ASP 34 n 34 ASP 34 B LEU 35 n 35 LEU 35 B GLU 36 n 36 GLU 36 B ARG 37 n 37 ARG 37 B GLY 38 n 38 GLY 38 B ARG 39 n 39 ARG 39 B THR 40 n 40 THR 40 B ASN 41 n 41 ASN 41 B PRO 42 n 42 PRO 42 B SER 43 n 43 SER 43 B LEU 44 n 44 LEU 44 B GLU 45 n 45 GLU 45 B THR 46 n 46 THR 46 B LEU 47 n 47 LEU 47 B GLN 48 n 48 GLN 48 B THR 49 n 49 THR 49 B LEU 50 n 50 LEU 50 B ALA 51 n 51 ALA 51 B GLY 52 n 52 GLY 52 B ALA 53 n 53 ALA 53 B TYR 54 n 54 TYR 54 B ASN 55 n 55 ASN 55 B ILE 56 n 56 ILE 56 B THR 57 n 57 THR 57 B VAL 58 n 58 VAL 58 B HIS 59 n 59 HIS 59 B ASP 60 n 60 ASP 60 B LEU 61 n 61 LEU 61 B LEU 62 n 62 LEU 62 B GLU 63 n 63 GLU 63 B GLY 64 n 64 GLY 64 B VAL 65 n 65 VAL 65 B GLU 66 n 66 GLU 66 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric monomer gel filtration 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B B OG1 O THR HOH 40 101 2.04 A 1 A A O O HOH HOH 217 227 2.06 1 A A O O HOH HOH 313 314 2.06 1 A A O O HOH HOH 212 300 2.06 1 A A O O HOH HOH 205 270 2.14 1 4.26 0.50 120.30 124.56 A A A NE CZ NH1 ARG ARG ARG 14 14 14 N 1 3.54 0.50 120.30 123.84 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 1 11.38 1.70 111.00 122.38 A A A CB CG CD1 LEU LEU LEU 44 44 44 A A A N 1 -3.57 0.50 120.30 116.73 B B B NE CZ NH2 ARG ARG ARG 8 8 8 N 1 15.37 2.10 111.80 127.17 B B B CG CD NE ARG ARG ARG 39 39 39 N 1 5.49 0.50 120.30 125.79 B B B NE CZ NH1 ARG ARG ARG 39 39 39 N 1 -3.35 0.50 120.30 116.95 B B B NE CZ NH2 ARG ARG ARG 39 39 39 N 1 A A CD OE2 GLU GLU 5 5 -0.076 0.011 1.252 1.176 N 1 A A CB CG ASP ASP 20 20 0.189 0.021 1.513 1.702 N 1 A A CG OD2 ASP ASP 20 20 0.204 0.023 1.249 1.453 N 1 A A CD OE2 GLU GLU 45 45 -0.072 0.011 1.252 1.180 N 1 B B CZ NH2 ARG ARG 8 8 0.095 0.013 1.326 1.421 N 1 B B CD OE1 GLU GLU 23 23 -0.099 0.011 1.252 1.153 N 1 B B CD OE2 GLU GLU 23 23 0.104 0.011 1.252 1.356 N 1 A A O O HOH HOH 246 275 1.98 1_555 2_556 1 A B O O HOH HOH 310 200 2.01 1_555 2_546 16.675 0.26 0.00 -0.31 -0.23 0.00 0.13 0.977 0.962 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.17701 0.12870 0.13114 1.35 43.94 1558 29520 5.0 98.20 2.038 0.036 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.051 0.053 0.80 0.80 1.20 6RNX MAXIMUM LIKELIHOOD MASK 1.35 43.94 255 1327 18 0 1054 0.029 0.019 1147 0.002 0.020 1132 2.375 2.021 1561 1.477 3.000 2626 4.242 5.000 150 31.905 23.214 56 13.594 15.000 222 23.005 15.000 15 0.159 0.200 189 0.013 0.020 1266 0.005 0.020 221 1.694 1.082 551 1.690 1.081 550 1.909 1.632 691 1.909 1.632 692 3.897 1.613 596 3.903 1.611 596 4.550 2.242 861 6.156 17.704 1420 6.154 17.716 1421 5.473 3.000 2279 38.979 5.000 156 12.856 5.000 2360 0.280 0.242 1.385 118 2085 20 95.66 1.35 44 6RNZ 31092 0.048 1 10.9 2.8 98.3 1.35 1.4 2968 1 refinement REFMAC 5.8.0158 data reduction XDS data scaling autoPROC phasing MOLREP N Crystal structure of the N-terminal HTH DNA-binding domain of the essential repressor DdrO from radiation-resistant Deinococcus bacteria (Deinococcus deserti) 1 N N 1 N N 2 N N 2 N N 2 N N 3 N N 3 N N A LYS 2 A LYS 2 HELX_P A ARG 14 A ARG 14 1 AA1 13 A ARG 17 A ARG 17 HELX_P A GLN 26 A GLN 26 1 AA2 10 A SER 28 A SER 28 HELX_P A ARG 37 A ARG 37 1 AA3 10 A SER 43 A SER 43 HELX_P A TYR 54 A TYR 54 1 AA4 12 A THR 57 A THR 57 HELX_P A GLU 63 A GLU 63 1 AA5 7 B LYS 2 B LYS 2 HELX_P B ARG 14 B ARG 14 1 AA6 13 B ARG 17 B ARG 17 HELX_P B GLN 26 B GLN 26 1 AA7 10 B SER 28 B SER 28 HELX_P B GLY 38 B GLY 38 1 AA8 11 B SER 43 B SER 43 HELX_P B TYR 54 B TYR 54 1 AA9 12 B THR 57 B THR 57 HELX_P B GLU 63 B GLU 63 1 AB1 7 DNA BINDING PROTEIN ----, DNA BINDING PROTEIN DDROC_DEIDV UNP 1 1 C1CYP4 MKLHERLRELRSERGLRLKDVAEVAQISVPYLSDLERGRTNPSLETLQTLAGAYNITVHDLLEGVE 1 66 6RNZ 1 66 C1CYP4 A 1 1 66 1 66 6RNZ 1 66 C1CYP4 B 1 1 66 binding site for residue GOL A 100 A GOL 100 Software 3 binding site for residue GOL A 101 A GOL 101 Software 9 binding site for residue GOL A 102 A GOL 102 Software 4 A GLY 15 A GLY 15 3 1_555 A LEU 16 A LEU 16 3 1_555 A HOH 230 F HOH 3 1_555 A LEU 44 A LEU 44 9 1_555 A GLN 48 A GLN 48 9 1_555 A VAL 58 A VAL 58 9 1_555 A HIS 59 A HIS 59 9 1_555 A HOH 204 F HOH 9 1_555 A HOH 246 F HOH 9 1_555 B VAL 65 B VAL 65 9 1_555 B GLU 66 B GLU 66 9 1_555 B HOH 105 G HOH 9 1_555 A SER 43 A SER 43 4 1_555 A THR 46 A THR 46 4 1_555 A HOH 203 F HOH 4 1_555 A HOH 218 F HOH 4 1_555 4 P 1 21 1