0.009254
0.005343
0.000000
0.000000
0.010685
0.000000
0.000000
0.000000
0.007503
0.00000
0.00000
0.00000
0000-0002-9843-3888
Gorecka, K.M.
0000-0002-9833-4281
Krepl, M.
0000-0001-9903-4689
Szlachcic, A.
0000-0003-2684-1775
Poznanski, J.
0000-0001-6558-6186
Sponer, J.
0000-0001-8632-0977
Nowotny, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
108.066
108.066
133.281
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
O
N
76
N
P
N
77
N
O
N
78
N
O
N
79
N
O
N
80
N
C
N
81
R
C
N
82
N
O
N
83
S
C
N
84
N
O
N
85
N
C
N
86
R
C
Y
87
N
N
Y
88
N
C
Y
89
N
N
Y
90
N
C
Y
91
N
C
N
92
N
N
Y
93
N
N
Y
94
N
C
Y
95
N
N
Y
96
N
C
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
C
N
117
R
C
N
118
N
O
N
119
S
C
N
120
N
O
N
121
N
C
N
122
R
C
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
N
N
127
N
C
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
P
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
C
N
151
R
C
N
152
N
O
N
153
S
C
N
154
N
O
N
155
N
C
N
156
R
C
Y
157
N
N
Y
158
N
C
Y
159
N
N
Y
160
N
C
N
161
N
C
N
162
N
O
N
163
N
N
N
164
N
C
N
165
N
N
N
166
N
N
Y
167
N
C
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
O
N
183
N
P
N
184
N
O
N
185
N
O
N
186
N
O
N
187
N
C
N
188
R
C
N
189
N
O
N
190
S
C
N
191
N
O
N
192
N
C
N
193
R
C
N
194
N
N
N
195
N
C
N
196
N
O
N
197
N
N
N
198
N
C
N
199
N
O
N
200
N
C
N
201
N
C
N
202
N
C
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
N
C
N
223
N
C
N
224
N
C
N
225
N
O
N
226
N
N
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
O
N
246
N
O
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
N
C
N
259
N
C
N
260
N
O
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
Y
272
N
C
Y
273
N
N
Y
274
N
C
Y
275
N
C
Y
276
N
N
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
S
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
C
N
341
N
C
N
342
N
C
N
343
N
N
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
N
365
N
C
N
366
N
S
N
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
NA
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
N
N
405
S
C
N
406
N
C
N
407
N
O
N
408
N
C
N
409
N
C
N
410
N
C
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
N
426
N
O
N
427
N
O
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
N
N
436
S
C
N
437
N
C
N
438
N
O
N
439
R
C
N
440
N
O
N
441
N
C
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
N
N
453
S
C
N
454
N
C
N
455
N
O
N
456
N
C
Y
457
N
C
Y
458
N
C
Y
459
N
C
Y
460
N
N
Y
461
N
C
Y
462
N
C
Y
463
N
C
Y
464
N
C
Y
465
N
C
N
466
N
O
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
N
N
480
S
C
N
481
N
C
N
482
N
O
N
483
N
C
Y
484
N
C
Y
485
N
C
Y
486
N
C
Y
487
N
C
Y
488
N
C
Y
489
N
C
N
490
N
O
N
491
N
O
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
N
N
504
S
C
N
505
N
C
N
506
N
O
N
507
N
C
N
508
N
C
N
509
N
C
N
510
N
O
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
Y
276
N
sing
Y
277
N
doub
Y
278
N
doub
N
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
Y
384
N
doub
Y
385
N
sing
Y
386
N
sing
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
doub
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
Y
453
N
doub
Y
454
N
sing
Y
455
N
sing
N
456
N
sing
Y
457
N
doub
Y
458
N
sing
Y
459
N
sing
N
460
N
sing
Y
461
N
sing
Y
462
N
doub
N
463
N
sing
Y
464
N
doub
N
465
N
sing
Y
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
doub
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
Y
481
N
doub
Y
482
N
sing
Y
483
N
sing
N
484
N
sing
Y
485
N
doub
N
486
N
sing
Y
487
N
doub
N
488
N
sing
Y
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
doub
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
UK
Nat Commun
2041-1723
10
4102
4102
10.1038/s41467-019-11900-8
31506434
RuvC uses dynamic probing of the Holliday junction to achieve sequence specificity and efficient resolution.
2019
0000-0002-9843-3888
0000-0002-9833-4281
0000-0001-9903-4689
0000-0003-2684-1775
0000-0001-6558-6186
0000-0001-8632-0977
10.2210/pdb6s16/pdb
pdb_00006s16
293
1
N
CCD
2015-09-02
RAYONIX MX225-HS
SINGLE WAVELENGTH
M
x-ray
1
0.895000
1.0
14.3
BESSY
0.895000
SYNCHROTRON
BESSY BEAMLINE 14.3
18074.121
Crossover junction endodeoxyribonuclease RuvC
3.1.22.4
2
man
polymer
10136.518
DNA (33-MER)
1
man
polymer
10136.520
DNA (5'-D(*AP*TP*CP*TP*GP*CP*CP*GP*AP*TP*TP*C)-3')
2
man
polymer
22.990
SODIUM ION
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
18.015
water
3
nat
water
Holliday junction nuclease RuvC,Holliday junction resolvase RuvC
no
no
GPHMVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQ
NELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVKQALAGHGHAAKEEVALMVRGILGLKEAPRPSHLADALAIALTHAFY
ARMGTAKPL
GPHMVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQ
NELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVKQALAGHGHAAKEEVALMVRGILGLKEAPRPSHLADALAIALTHAFY
ARMGTAKPL
A,B
polypeptide(L)
no
no
(DC)(DA)(DA)(DT)(DC)(DG)(DG)(DC)(DT)(DT)(DT)(DG)(DA)(DC)(DC)(DT)(DT)(DT)(DG)(DG)
(DT)(DC)(DA)(DA)(DT)(DC)(DG)(DG)(DC)(DA)(DG)(DA)(DT)
CAATCGGCTTTGACCTTTGGTCAATCGGCAGAT
C
polydeoxyribonucleotide
no
no
(DA)(DT)(DC)(DT)(DG)(DC)(DC)(DG)(DA)(DT)(DT)(DC)(DT)(DG)(DG)(DT)(DT)(DT)(DC)(DC)
(DA)(DG)(DA)(DA)(DA)(DG)(DC)(DC)(DG)(DA)(DT)(DT)(DG)
ATCTGCCGATTCTGGTTTCCAGAAAGCCGATTG
D,F
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
169
27634
ruvC, TTHA1090
300852
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
562
Escherichia coli
Biological sequence
sample
1
33
32630
synthetic construct
32630
synthetic construct
Biological sequence
sample
1
33
32630
synthetic construct
32630
synthetic construct
Biological sequence
1
3.38
63.56
VAPOR DIFFUSION, HANGING DROP
0.4 M ammonium phosphate
298
-17.314
1
C
1
F
33
26.979
C_DC1:DG33_F
1
-15.591
-0.903
0.968
0.958
11.086
1
20
C
2
F
32
8.458
C_DA2:DT32_F
2
-13.769
-0.227
0.713
-0.012
9.610
1
20
C
3
F
31
9.043
C_DA3:DT31_F
3
-25.460
-0.028
0.382
-0.030
1.237
1
20
C
4
F
30
4.643
C_DT4:DA30_F
4
-21.955
0.487
-0.242
-0.303
-9.858
1
C
5
F
29
23.965
C_DC5:DG29_F
5
-31.304
1.761
0.623
0.324
2.986
1
19
C
6
F
28
3.024
C_DG6:DC28_F
6
-11.821
0.482
0.418
0.017
10.360
1
19
C
7
F
27
1.012
C_DG7:DC27_F
7
-9.301
0.308
0.462
0.293
10.161
1
19
C
8
F
26
-2.349
C_DC8:DG26_F
8
-4.752
0.091
0.032
0.112
14.451
1
20
C
9
F
25
1.176
C_DT9:DA25_F
9
-11.737
0.512
-0.416
0.054
-39.385
1
20
C
10
C
24
-0.342
C_DT10:DA24_C
10
-7.920
-0.070
0.954
0.172
-22.046
1
20
C
11
C
23
-0.990
C_DT11:DA23_C
11
-2.876
-0.773
0.247
0.192
-7.438
1
19
C
12
C
22
3.199
C_DG12:DC22_C
12
-2.802
-0.527
-0.757
-0.155
1.679
1
20
C
13
C
21
-3.154
C_DA13:DT21_C
13
-14.417
0.408
-0.443
-0.280
16.234
1
19
C
14
C
20
5.630
C_DC14:DG20_C
14
-16.318
-0.025
-0.108
-0.013
3.976
1
19
C
15
C
19
5.233
C_DC15:DG19_C
15
-1.220
-0.320
-0.296
0.055
-8.699
1
20
C
25
D
9
6.524
C_DT25:DA9_D
16
-37.516
-1.038
0.706
-0.004
-13.775
1
19
C
26
D
8
0.294
C_DC26:DG8_D
17
-1.310
-0.085
0.534
0.067
-4.219
1
C
27
D
7
12.376
C_DG27:DC7_D
18
-17.359
0.181
0.227
0.862
-1.712
1
19
C
28
D
6
-3.486
C_DG28:DC6_D
19
-17.755
0.874
0.012
0.295
19.765
1
19
C
29
D
5
10.913
C_DC29:DG5_D
20
-33.494
-0.005
0.173
0.216
9.317
1
20
C
30
D
4
2.131
C_DA30:DT4_D
21
-24.852
0.437
0.411
0.027
7.738
1
19
C
31
D
3
3.168
C_DG31:DC3_D
22
-19.276
-0.247
0.183
0.061
8.885
1
20
C
32
D
2
0.888
C_DA32:DT2_D
23
-17.413
-0.129
0.017
-0.183
-33.619
1
20
D
10
F
24
10.885
D_DT10:DA24_F
24
-13.572
-1.409
0.435
0.001
-16.746
1
20
D
11
F
23
0.107
D_DT11:DA23_F
25
-36.943
-0.344
-0.196
-0.485
-13.293
1
19
D
12
F
22
-1.397
D_DC12:DG22_F
26
-8.310
1.123
-1.898
-1.026
3.034
37.869
C
C
1
2
4.237
F
F
33
32
2.915
2.742
-0.833
0.757
CC_DC1DA2:DT32DG33_FF
1
-4.214
6.512
37.546
0.845
0.790
3.660
32.401
C
C
2
3
-7.135
F
F
32
31
3.674
-3.972
-0.082
-0.102
CC_DA2DA3:DT31DT32_FF
2
0.011
-0.019
32.164
0.604
0.149
3.564
42.613
C
C
3
4
2.297
F
F
31
30
3.603
1.667
-0.271
0.041
CC_DA3DT4:DA30DT31_FF
3
4.012
-5.530
42.401
-0.128
0.817
3.808
40.113
C
C
4
5
0.732
F
F
30
29
3.822
0.502
0.680
0.480
CC_DT4DC5:DG29DA30_FF
4
-1.099
1.603
40.095
0.633
-1.138
3.153
26.312
C
C
5
6
15.276
F
F
29
28
3.079
6.875
-0.627
0.766
CC_DC5DG6:DC28DG29_FF
5
0.785
-1.744
25.401
-0.108
1.582
3.096
33.258
C
C
6
7
11.480
F
F
28
27
3.170
6.527
-0.226
0.001
CC_DG6DG7:DC27DC28_FF
6
1.730
-3.042
32.584
-1.053
0.675
3.410
34.102
C
C
7
8
-3.828
F
F
27
26
3.357
-2.230
0.555
-0.228
CC_DG7DC8:DG26DC27_FF
7
6.557
-11.255
33.412
-0.019
0.142
2.853
33.834
C
C
8
9
36.430
F
F
26
25
3.193
19.611
0.806
0.274
CC_DC8DT9:DA25DG26_FF
8
9.307
-17.290
26.110
-2.860
0.197
2.735
30.306
C
C
10
11
10.284
C
C
24
23
2.941
5.315
-0.044
-0.565
CC_DT10DT11:DA23DA24_CC
9
6.006
-11.621
29.249
-2.029
1.154
3.264
31.801
C
C
11
12
3.355
C
C
23
22
3.275
1.826
0.256
0.092
CC_DT11DG12:DC22DA23_CC
10
6.150
-11.297
31.164
-0.170
0.669
3.338
37.414
C
C
12
13
6.716
C
C
22
21
3.317
4.296
-0.510
0.135
CC_DG12DA13:DT21DC22_CC
11
-2.556
3.996
37.090
-0.367
0.452
2.811
28.384
C
C
13
14
5.817
C
C
21
20
2.980
2.843
0.688
-0.772
CC_DA13DC14:DG20DT21_CC
12
-2.743
5.612
28.114
-2.158
-1.965
3.762
34.829
C
C
14
15
9.179
C
C
20
19
3.671
5.448
1.067
0.052
CC_DC14DC15:DG19DG20_CC
13
5.906
-9.951
33.917
-0.868
-0.748
3.393
37.370
C
C
25
26
34.263
D
D
9
8
3.719
20.782
-0.012
0.494
CC_DT25DC26:DG8DA9_DD
14
0.005
-0.007
31.232
-2.499
0.020
3.159
36.784
C
C
26
27
-7.939
D
D
8
7
3.298
-4.995
-0.528
0.856
CC_DC26DG27:DC7DG8_DD
15
-0.072
0.114
36.455
2.030
0.827
3.425
38.374
C
C
27
28
9.585
D
D
7
6
3.386
6.271
-0.855
0.280
CC_DG27DG28:DC6DC7_DD
16
-1.936
2.958
37.830
-0.396
1.047
2.791
25.338
C
C
28
29
14.041
D
D
6
5
2.884
6.099
0.936
-0.153
CC_DG28DC29:DG5DC6_DD
17
0.715
-1.646
24.595
-1.904
-1.951
3.602
37.498
C
C
29
30
8.983
D
D
5
4
3.587
5.748
-0.375
0.241
CC_DC29DA30:DT4DG5_DD
18
-2.931
4.580
36.958
-0.458
0.158
3.379
31.485
C
C
30
31
3.697
D
D
4
3
3.400
2.005
0.307
-0.167
CC_DA30DG31:DC3DT4_DD
19
-0.406
0.748
31.421
-0.696
-0.645
3.332
36.027
C
C
31
32
1.034
D
D
3
2
3.352
0.639
-0.324
-0.345
CC_DG31DA32:DT2DC3_DD
20
1.379
-2.231
35.996
-0.651
0.724
3.402
42.076
D
D
10
11
6.647
F
F
24
23
3.208
4.743
-1.259
0.508
DD_DT10DT11:DA23DA24_FF
21
-6.964
9.760
41.261
0.206
1.018
3.686
48.364
D
D
11
12
-3.968
F
F
23
22
3.865
-3.233
-0.406
0.770
DD_DT11DC12:DG22DA23_FF
22
8.580
-10.529
47.538
1.233
1.272
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Refinement description
1
0
2019-09-25
1
1
2024-01-24
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Czech Republic
European Regional Development Fund
CZ.02.1.01/0.0/0.0/15_003/0000477
Wellcome Trust
098022
N
PDBE
Y
PDBE
2019-06-18
REL
REL
NA
SODIUM ION
CL
CHLORIDE ION
HOH
water
N
4LD0
PDB
experimental model
NA
2
4
NA
NA
201
A
CL
1
5
CL
CL
201
B
HOH
2
6
HOH
HOH
301
B
HOH
1
6
HOH
HOH
101
F
HOH
3
6
HOH
HOH
102
F
n
1
-2
A
n
2
-1
A
HIS
0
n
3
HIS
0
A
MET
1
n
4
MET
1
A
VAL
2
n
5
VAL
2
A
VAL
3
n
6
VAL
3
A
ALA
4
n
7
ALA
4
A
GLY
5
n
8
GLY
5
A
ILE
6
n
9
ILE
6
A
ASP
7
n
10
ASP
7
A
PRO
8
n
11
PRO
8
A
GLY
9
n
12
GLY
9
A
ILE
10
n
13
ILE
10
A
THR
11
n
14
THR
11
A
HIS
12
n
15
HIS
12
A
LEU
13
n
16
LEU
13
A
GLY
14
n
17
GLY
14
A
LEU
15
n
18
LEU
15
A
GLY
16
n
19
GLY
16
A
VAL
17
n
20
VAL
17
A
VAL
18
n
21
VAL
18
A
ALA
19
n
22
ALA
19
A
VAL
20
n
23
VAL
20
A
GLU
21
n
24
GLU
21
A
n
25
22
A
n
26
23
A
n
27
24
A
n
28
25
A
LEU
26
n
29
LEU
26
A
LYS
27
n
30
LYS
27
A
ALA
28
n
31
ALA
28
A
ARG
29
n
32
ARG
29
A
LEU
30
n
33
LEU
30
A
LEU
31
n
34
LEU
31
A
HIS
32
n
35
HIS
32
A
GLY
33
n
36
GLY
33
A
GLU
34
n
37
GLU
34
A
VAL
35
n
38
VAL
35
A
VAL
36
n
39
VAL
36
A
LYS
37
n
40
LYS
37
A
THR
38
n
41
THR
38
A
SER
39
n
42
SER
39
A
PRO
40
n
43
PRO
40
A
GLN
41
n
44
GLN
41
A
GLU
42
n
45
GLU
42
A
PRO
43
n
46
PRO
43
A
ALA
44
n
47
ALA
44
A
LYS
45
n
48
LYS
45
A
GLU
46
n
49
GLU
46
A
ARG
47
n
50
ARG
47
A
VAL
48
n
51
VAL
48
A
GLY
49
n
52
GLY
49
A
ARG
50
n
53
ARG
50
A
ILE
51
n
54
ILE
51
A
HIS
52
n
55
HIS
52
A
ALA
53
n
56
ALA
53
A
ARG
54
n
57
ARG
54
A
VAL
55
n
58
VAL
55
A
LEU
56
n
59
LEU
56
A
GLU
57
n
60
GLU
57
A
VAL
58
n
61
VAL
58
A
LEU
59
n
62
LEU
59
A
HIS
60
n
63
HIS
60
A
ARG
61
n
64
ARG
61
A
PHE
62
n
65
PHE
62
A
ARG
63
n
66
ARG
63
A
PRO
64
n
67
PRO
64
A
GLU
65
n
68
GLU
65
A
ALA
66
n
69
ALA
66
A
VAL
67
n
70
VAL
67
A
ALA
68
n
71
ALA
68
A
VAL
69
n
72
VAL
69
A
GLU
70
n
73
GLU
70
A
GLU
71
n
74
GLU
71
A
GLN
72
n
75
GLN
72
A
PHE
73
n
76
PHE
73
A
PHE
74
n
77
PHE
74
A
TYR
75
n
78
TYR
75
A
ARG
76
n
79
ARG
76
A
GLN
77
n
80
GLN
77
A
ASN
78
n
81
ASN
78
A
GLU
79
n
82
GLU
79
A
LEU
80
n
83
LEU
80
A
ALA
81
n
84
ALA
81
A
TYR
82
n
85
TYR
82
A
LYS
83
n
86
LYS
83
A
VAL
84
n
87
VAL
84
A
GLY
85
n
88
GLY
85
A
TRP
86
n
89
TRP
86
A
ALA
87
n
90
ALA
87
A
LEU
88
n
91
LEU
88
A
GLY
89
n
92
GLY
89
A
ALA
90
n
93
ALA
90
A
VAL
91
n
94
VAL
91
A
LEU
92
n
95
LEU
92
A
VAL
93
n
96
VAL
93
A
ALA
94
n
97
ALA
94
A
ALA
95
n
98
ALA
95
A
PHE
96
n
99
PHE
96
A
GLU
97
n
100
GLU
97
A
ALA
98
n
101
ALA
98
A
GLY
99
n
102
GLY
99
A
VAL
100
n
103
VAL
100
A
PRO
101
n
104
PRO
101
A
VAL
102
n
105
VAL
102
A
TYR
103
n
106
TYR
103
A
ALA
104
n
107
ALA
104
A
TYR
105
n
108
TYR
105
A
GLY
106
n
109
GLY
106
A
PRO
107
n
110
PRO
107
A
MET
108
n
111
MET
108
A
GLN
109
n
112
GLN
109
A
VAL
110
n
113
VAL
110
A
LYS
111
n
114
LYS
111
A
GLN
112
n
115
GLN
112
A
ALA
113
n
116
ALA
113
A
LEU
114
n
117
LEU
114
A
ALA
115
n
118
ALA
115
A
ALA
116
n
119
GLY
116
A
n
120
117
A
n
121
118
A
n
122
119
A
n
123
120
A
n
124
121
A
LYS
122
n
125
LYS
122
A
GLU
123
n
126
GLU
123
A
GLU
124
n
127
GLU
124
A
VAL
125
n
128
VAL
125
A
ALA
126
n
129
ALA
126
A
LEU
127
n
130
LEU
127
A
MET
128
n
131
MET
128
A
VAL
129
n
132
VAL
129
A
ARG
130
n
133
ARG
130
A
GLY
131
n
134
GLY
131
A
ILE
132
n
135
ILE
132
A
LEU
133
n
136
LEU
133
A
GLY
134
n
137
GLY
134
A
LEU
135
n
138
LEU
135
A
LYS
136
n
139
LYS
136
A
GLU
137
n
140
GLU
137
A
ALA
138
n
141
ALA
138
A
PRO
139
n
142
PRO
139
A
ARG
140
n
143
ARG
140
A
PRO
141
n
144
PRO
141
A
SER
142
n
145
SER
142
A
HIS
143
n
146
HIS
143
A
LEU
144
n
147
LEU
144
A
ALA
145
n
148
ALA
145
A
ASP
146
n
149
ASP
146
A
ALA
147
n
150
ALA
147
A
LEU
148
n
151
LEU
148
A
ALA
149
n
152
ALA
149
A
ILE
150
n
153
ILE
150
A
ALA
151
n
154
ALA
151
A
LEU
152
n
155
LEU
152
A
THR
153
n
156
THR
153
A
HIS
154
n
157
HIS
154
A
ALA
155
n
158
ALA
155
A
PHE
156
n
159
PHE
156
A
TYR
157
n
160
TYR
157
A
ALA
158
n
161
ALA
158
A
ARG
159
n
162
ARG
159
A
MET
160
n
163
MET
160
A
GLY
161
n
164
GLY
161
A
THR
162
n
165
THR
162
A
ALA
163
n
166
ALA
163
A
LYS
164
n
167
LYS
164
A
PRO
165
n
168
PRO
165
A
LEU
166
n
169
LEU
166
A
n
1
-2
B
n
2
-1
B
HIS
0
n
3
HIS
0
B
MET
1
n
4
MET
1
B
VAL
2
n
5
VAL
2
B
VAL
3
n
6
VAL
3
B
ALA
4
n
7
ALA
4
B
GLY
5
n
8
GLY
5
B
ILE
6
n
9
ILE
6
B
ASP
7
n
10
ASP
7
B
PRO
8
n
11
PRO
8
B
GLY
9
n
12
GLY
9
B
ILE
10
n
13
ILE
10
B
THR
11
n
14
THR
11
B
HIS
12
n
15
HIS
12
B
LEU
13
n
16
LEU
13
B
GLY
14
n
17
GLY
14
B
LEU
15
n
18
LEU
15
B
GLY
16
n
19
GLY
16
B
VAL
17
n
20
VAL
17
B
VAL
18
n
21
VAL
18
B
ALA
19
n
22
ALA
19
B
VAL
20
n
23
VAL
20
B
n
24
21
B
n
25
22
B
LYS
23
n
26
LYS
23
B
GLY
24
n
27
GLY
24
B
ALA
25
n
28
ALA
25
B
LEU
26
n
29
LEU
26
B
LYS
27
n
30
LYS
27
B
ALA
28
n
31
ALA
28
B
ARG
29
n
32
ARG
29
B
LEU
30
n
33
LEU
30
B
LEU
31
n
34
LEU
31
B
HIS
32
n
35
HIS
32
B
GLY
33
n
36
GLY
33
B
GLU
34
n
37
GLU
34
B
VAL
35
n
38
VAL
35
B
VAL
36
n
39
VAL
36
B
LYS
37
n
40
LYS
37
B
THR
38
n
41
THR
38
B
SER
39
n
42
SER
39
B
PRO
40
n
43
PRO
40
B
GLN
41
n
44
GLN
41
B
GLU
42
n
45
GLU
42
B
PRO
43
n
46
PRO
43
B
ALA
44
n
47
ALA
44
B
LYS
45
n
48
LYS
45
B
GLU
46
n
49
GLU
46
B
ARG
47
n
50
ARG
47
B
VAL
48
n
51
VAL
48
B
GLY
49
n
52
GLY
49
B
ARG
50
n
53
ARG
50
B
ILE
51
n
54
ILE
51
B
HIS
52
n
55
HIS
52
B
ALA
53
n
56
ALA
53
B
ARG
54
n
57
ARG
54
B
VAL
55
n
58
VAL
55
B
LEU
56
n
59
LEU
56
B
GLU
57
n
60
GLU
57
B
VAL
58
n
61
VAL
58
B
LEU
59
n
62
LEU
59
B
HIS
60
n
63
HIS
60
B
ARG
61
n
64
ARG
61
B
PHE
62
n
65
PHE
62
B
ARG
63
n
66
ARG
63
B
PRO
64
n
67
PRO
64
B
GLU
65
n
68
GLU
65
B
ALA
66
n
69
ALA
66
B
VAL
67
n
70
VAL
67
B
ALA
68
n
71
ALA
68
B
VAL
69
n
72
VAL
69
B
GLU
70
n
73
GLU
70
B
GLU
71
n
74
GLU
71
B
GLN
72
n
75
GLN
72
B
PHE
73
n
76
PHE
73
B
PHE
74
n
77
PHE
74
B
TYR
75
n
78
TYR
75
B
ARG
76
n
79
ARG
76
B
GLN
77
n
80
GLN
77
B
ASN
78
n
81
ASN
78
B
GLU
79
n
82
GLU
79
B
LEU
80
n
83
LEU
80
B
ALA
81
n
84
ALA
81
B
TYR
82
n
85
TYR
82
B
LYS
83
n
86
LYS
83
B
VAL
84
n
87
VAL
84
B
GLY
85
n
88
GLY
85
B
TRP
86
n
89
TRP
86
B
ALA
87
n
90
ALA
87
B
LEU
88
n
91
LEU
88
B
GLY
89
n
92
GLY
89
B
ALA
90
n
93
ALA
90
B
VAL
91
n
94
VAL
91
B
LEU
92
n
95
LEU
92
B
VAL
93
n
96
VAL
93
B
ALA
94
n
97
ALA
94
B
ALA
95
n
98
ALA
95
B
PHE
96
n
99
PHE
96
B
GLU
97
n
100
GLU
97
B
ALA
98
n
101
ALA
98
B
GLY
99
n
102
GLY
99
B
VAL
100
n
103
VAL
100
B
PRO
101
n
104
PRO
101
B
VAL
102
n
105
VAL
102
B
TYR
103
n
106
TYR
103
B
ALA
104
n
107
ALA
104
B
TYR
105
n
108
TYR
105
B
GLY
106
n
109
GLY
106
B
PRO
107
n
110
PRO
107
B
MET
108
n
111
MET
108
B
GLN
109
n
112
GLN
109
B
VAL
110
n
113
VAL
110
B
LYS
111
n
114
LYS
111
B
GLN
112
n
115
GLN
112
B
ALA
113
n
116
ALA
113
B
LEU
114
n
117
LEU
114
B
ALA
115
n
118
ALA
115
B
GLY
116
n
119
GLY
116
B
HIS
117
n
120
HIS
117
B
GLY
118
n
121
GLY
118
B
HIS
119
n
122
HIS
119
B
ALA
120
n
123
ALA
120
B
ALA
121
n
124
ALA
121
B
LYS
122
n
125
LYS
122
B
GLU
123
n
126
GLU
123
B
GLU
124
n
127
GLU
124
B
VAL
125
n
128
VAL
125
B
ALA
126
n
129
ALA
126
B
LEU
127
n
130
LEU
127
B
MET
128
n
131
MET
128
B
VAL
129
n
132
VAL
129
B
ARG
130
n
133
ARG
130
B
GLY
131
n
134
GLY
131
B
ILE
132
n
135
ILE
132
B
LEU
133
n
136
LEU
133
B
GLY
134
n
137
GLY
134
B
LEU
135
n
138
LEU
135
B
LYS
136
n
139
LYS
136
B
GLU
137
n
140
GLU
137
B
ALA
138
n
141
ALA
138
B
PRO
139
n
142
PRO
139
B
ARG
140
n
143
ARG
140
B
PRO
141
n
144
PRO
141
B
SER
142
n
145
SER
142
B
HIS
143
n
146
HIS
143
B
LEU
144
n
147
LEU
144
B
ALA
145
n
148
ALA
145
B
ASP
146
n
149
ASP
146
B
ALA
147
n
150
ALA
147
B
LEU
148
n
151
LEU
148
B
ALA
149
n
152
ALA
149
B
ILE
150
n
153
ILE
150
B
ALA
151
n
154
ALA
151
B
LEU
152
n
155
LEU
152
B
THR
153
n
156
THR
153
B
HIS
154
n
157
HIS
154
B
ALA
155
n
158
ALA
155
B
PHE
156
n
159
PHE
156
B
TYR
157
n
160
TYR
157
B
ALA
158
n
161
ALA
158
B
ARG
159
n
162
ARG
159
B
MET
160
n
163
MET
160
B
GLY
161
n
164
GLY
161
B
THR
162
n
165
THR
162
B
ALA
163
n
166
ALA
163
B
LYS
164
n
167
LYS
164
B
PRO
165
n
168
PRO
165
B
LEU
166
n
169
LEU
166
B
DC
1
n
1
DC
1
C
DA
2
n
2
DA
2
C
DA
3
n
3
DA
3
C
DT
4
n
4
DT
4
C
DC
5
n
5
DC
5
C
DG
6
n
6
DG
6
C
DG
7
n
7
DG
7
C
DC
8
n
8
DC
8
C
DT
9
n
9
DT
9
C
DT
10
n
10
DT
10
C
DT
11
n
11
DT
11
C
DG
12
n
12
DG
12
C
DA
13
n
13
DA
13
C
DC
14
n
14
DC
14
C
DC
15
n
15
DC
15
C
DT
16
n
16
DT
16
C
DT
17
n
17
DT
17
C
DT
18
n
18
DT
18
C
DG
19
n
19
DG
19
C
DG
20
n
20
DG
20
C
DT
21
n
21
DT
21
C
DC
22
n
22
DC
22
C
DA
23
n
23
DA
23
C
DA
24
n
24
DA
24
C
DT
25
n
25
DT
25
C
DC
26
n
26
DC
26
C
DG
27
n
27
DG
27
C
DG
28
n
28
DG
28
C
DC
29
n
29
DC
29
C
DA
30
n
30
DA
30
C
DG
31
n
31
DG
31
C
DA
32
n
32
DA
32
C
DT
33
n
33
DT
33
C
DA
1
n
1
DA
1
D
DT
2
n
2
DT
2
D
DC
3
n
3
DC
3
D
DT
4
n
4
DT
4
D
DG
5
n
5
DG
5
D
DC
6
n
6
DC
6
D
DC
7
n
7
DC
7
D
DG
8
n
8
DG
8
D
DA
9
n
9
DA
9
D
DT
10
n
10
DT
10
D
DT
11
n
11
DT
11
D
DC
12
n
12
DC
12
D
n
13
13
D
n
14
14
D
n
15
15
D
n
16
16
D
n
17
17
D
n
18
18
D
n
19
19
D
n
20
20
D
n
21
21
D
n
22
22
D
n
23
23
D
n
24
24
D
n
25
25
D
n
26
26
D
n
27
27
D
n
28
28
D
n
29
29
D
n
30
30
D
n
31
31
D
n
32
32
D
n
33
33
D
n
1
1
F
n
2
2
F
n
3
3
F
n
4
4
F
n
5
5
F
n
6
6
F
n
7
7
F
n
8
8
F
n
9
9
F
n
10
10
F
n
11
11
F
n
12
12
F
n
13
13
F
n
14
14
F
n
15
15
F
n
16
16
F
n
17
17
F
n
18
18
F
n
19
19
F
n
20
20
F
n
21
21
F
DG
22
n
22
DG
22
F
DA
23
n
23
DA
23
F
DA
24
n
24
DA
24
F
DA
25
n
25
DA
25
F
DG
26
n
26
DG
26
F
DC
27
n
27
DC
27
F
DC
28
n
28
DC
28
F
DG
29
n
29
DG
29
F
DA
30
n
30
DA
30
F
DT
31
n
31
DT
31
F
DT
32
n
32
DT
32
F
DG
33
n
33
DG
33
F
author_and_software_defined_assembly
PISA
5
pentameric
cross-linking
8160
-76
21890
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLU
34
A
O
GLU
37
A
N
LEU
15
A
N
LEU
18
A
O
GLY
16
A
O
GLY
19
A
N
GLY
5
A
N
GLY
8
A
N
ALA
4
A
N
ALA
7
A
O
ALA
68
A
O
ALA
71
A
N
VAL
69
A
N
VAL
72
A
O
TYR
103
A
O
TYR
106
B
O
GLU
34
B
O
GLU
37
B
N
LEU
15
B
N
LEU
18
B
O
GLY
16
B
O
GLY
19
B
N
GLY
5
B
N
GLY
8
B
N
ALA
4
B
N
ALA
7
B
O
ALA
66
B
O
ALA
69
B
N
VAL
69
B
N
VAL
72
B
O
TYR
103
B
O
TYR
106
1
A
NE2
HIS
0
A
NE2
HIS
3
1
Y
1
A
CG
GLU
21
A
CG
GLU
24
1
Y
1
A
CD
GLU
21
A
CD
GLU
24
1
Y
1
A
OE1
GLU
21
A
OE1
GLU
24
1
Y
1
A
OE2
GLU
21
A
OE2
GLU
24
1
Y
1
A
CG
LEU
26
A
CG
LEU
29
1
Y
1
A
CD1
LEU
26
A
CD1
LEU
29
1
Y
1
A
CD2
LEU
26
A
CD2
LEU
29
1
Y
1
A
CG
LYS
27
A
CG
LYS
30
1
Y
1
A
CD
LYS
27
A
CD
LYS
30
1
Y
1
A
CE
LYS
27
A
CE
LYS
30
1
Y
1
A
NZ
LYS
27
A
NZ
LYS
30
1
Y
1
A
CZ
ARG
29
A
CZ
ARG
32
1
Y
1
A
NH1
ARG
29
A
NH1
ARG
32
1
Y
1
A
NH2
ARG
29
A
NH2
ARG
32
1
Y
1
A
CE
LYS
37
A
CE
LYS
40
1
Y
1
A
NZ
LYS
37
A
NZ
LYS
40
1
Y
1
A
CZ
ARG
63
A
CZ
ARG
66
1
Y
1
A
NH1
ARG
63
A
NH1
ARG
66
1
Y
1
A
NH2
ARG
63
A
NH2
ARG
66
1
Y
1
A
CG
ARG
76
A
CG
ARG
79
1
Y
1
A
CD
ARG
76
A
CD
ARG
79
1
Y
1
A
NE
ARG
76
A
NE
ARG
79
1
Y
1
A
CZ
ARG
76
A
CZ
ARG
79
1
Y
1
A
NH1
ARG
76
A
NH1
ARG
79
1
Y
1
A
NH2
ARG
76
A
NH2
ARG
79
1
Y
1
A
CG
GLU
79
A
CG
GLU
82
1
Y
1
A
CD
GLU
79
A
CD
GLU
82
1
Y
1
A
OE1
GLU
79
A
OE1
GLU
82
1
Y
1
A
OE2
GLU
79
A
OE2
GLU
82
1
Y
1
A
CG
LYS
122
A
CG
LYS
125
1
Y
1
A
CD
LYS
122
A
CD
LYS
125
1
Y
1
A
CE
LYS
122
A
CE
LYS
125
1
Y
1
A
NZ
LYS
122
A
NZ
LYS
125
1
Y
1
A
CG
GLU
123
A
CG
GLU
126
1
Y
1
A
CD
GLU
123
A
CD
GLU
126
1
Y
1
A
OE1
GLU
123
A
OE1
GLU
126
1
Y
1
A
OE2
GLU
123
A
OE2
GLU
126
1
Y
1
A
CG
GLU
124
A
CG
GLU
127
1
Y
1
A
CD
GLU
124
A
CD
GLU
127
1
Y
1
A
OE1
GLU
124
A
OE1
GLU
127
1
Y
1
A
OE2
GLU
124
A
OE2
GLU
127
1
Y
1
A
CG1
VAL
125
A
CG1
VAL
128
1
Y
1
A
CG2
VAL
125
A
CG2
VAL
128
1
Y
1
A
CG
ARG
130
A
CG
ARG
133
1
Y
1
A
CD
ARG
130
A
CD
ARG
133
1
Y
1
A
NE
ARG
130
A
NE
ARG
133
1
Y
1
A
CZ
ARG
130
A
CZ
ARG
133
1
Y
1
A
NH1
ARG
130
A
NH1
ARG
133
1
Y
1
A
NH2
ARG
130
A
NH2
ARG
133
1
Y
1
A
CG1
ILE
132
A
CG1
ILE
135
1
Y
1
A
CG2
ILE
132
A
CG2
ILE
135
1
Y
1
A
CD1
ILE
132
A
CD1
ILE
135
1
Y
1
A
CG
LYS
136
A
CG
LYS
139
1
Y
1
A
CD
LYS
136
A
CD
LYS
139
1
Y
1
A
CE
LYS
136
A
CE
LYS
139
1
Y
1
A
NZ
LYS
136
A
NZ
LYS
139
1
Y
1
A
CG
GLU
137
A
CG
GLU
140
1
Y
1
A
CD
GLU
137
A
CD
GLU
140
1
Y
1
A
OE1
GLU
137
A
OE1
GLU
140
1
Y
1
A
OE2
GLU
137
A
OE2
GLU
140
1
Y
1
A
CG
ARG
140
A
CG
ARG
143
1
Y
1
A
CD
ARG
140
A
CD
ARG
143
1
Y
1
A
NE
ARG
140
A
NE
ARG
143
1
Y
1
A
CZ
ARG
140
A
CZ
ARG
143
1
Y
1
A
NH1
ARG
140
A
NH1
ARG
143
1
Y
1
A
NH2
ARG
140
A
NH2
ARG
143
1
Y
1
A
CE
LYS
164
A
CE
LYS
167
1
Y
1
A
NZ
LYS
164
A
NZ
LYS
167
1
Y
1
B
CG
LYS
23
B
CG
LYS
26
1
Y
1
B
CD
LYS
23
B
CD
LYS
26
1
Y
1
B
CE
LYS
23
B
CE
LYS
26
1
Y
1
B
NZ
LYS
23
B
NZ
LYS
26
1
Y
1
B
CG
LEU
26
B
CG
LEU
29
1
Y
1
B
CD1
LEU
26
B
CD1
LEU
29
1
Y
1
B
CD2
LEU
26
B
CD2
LEU
29
1
Y
1
B
CG
LYS
27
B
CG
LYS
30
1
Y
1
B
CD
LYS
27
B
CD
LYS
30
1
Y
1
B
CE
LYS
27
B
CE
LYS
30
1
Y
1
B
NZ
LYS
27
B
NZ
LYS
30
1
Y
1
B
CG
GLU
57
B
CG
GLU
60
1
Y
1
B
CD
GLU
57
B
CD
GLU
60
1
Y
1
B
OE1
GLU
57
B
OE1
GLU
60
1
Y
1
B
OE2
GLU
57
B
OE2
GLU
60
1
Y
1
B
CG
PHE
73
B
CG
PHE
76
1
Y
1
B
CD1
PHE
73
B
CD1
PHE
76
1
Y
1
B
CD2
PHE
73
B
CD2
PHE
76
1
Y
1
B
CE1
PHE
73
B
CE1
PHE
76
1
Y
1
B
CE2
PHE
73
B
CE2
PHE
76
1
Y
1
B
CZ
PHE
73
B
CZ
PHE
76
1
Y
1
B
CG
LYS
111
B
CG
LYS
114
1
Y
1
B
CD
LYS
111
B
CD
LYS
114
1
Y
1
B
CE
LYS
111
B
CE
LYS
114
1
Y
1
B
NZ
LYS
111
B
NZ
LYS
114
1
Y
1
B
CG
GLN
112
B
CG
GLN
115
1
Y
1
B
CD
GLN
112
B
CD
GLN
115
1
Y
1
B
OE1
GLN
112
B
OE1
GLN
115
1
Y
1
B
NE2
GLN
112
B
NE2
GLN
115
1
Y
1
B
CG
HIS
117
B
CG
HIS
120
1
Y
1
B
ND1
HIS
117
B
ND1
HIS
120
1
Y
1
B
CD2
HIS
117
B
CD2
HIS
120
1
Y
1
B
CE1
HIS
117
B
CE1
HIS
120
1
Y
1
B
NE2
HIS
117
B
NE2
HIS
120
1
Y
1
B
CG
HIS
119
B
CG
HIS
122
1
Y
1
B
ND1
HIS
119
B
ND1
HIS
122
1
Y
1
B
CD2
HIS
119
B
CD2
HIS
122
1
Y
1
B
CE1
HIS
119
B
CE1
HIS
122
1
Y
1
B
NE2
HIS
119
B
NE2
HIS
122
1
Y
1
B
CG
LYS
122
B
CG
LYS
125
1
Y
1
B
CD
LYS
122
B
CD
LYS
125
1
Y
1
B
CE
LYS
122
B
CE
LYS
125
1
Y
1
B
NZ
LYS
122
B
NZ
LYS
125
1
Y
1
B
CG
GLU
123
B
CG
GLU
126
1
Y
1
B
CD
GLU
123
B
CD
GLU
126
1
Y
1
B
OE1
GLU
123
B
OE1
GLU
126
1
Y
1
B
OE2
GLU
123
B
OE2
GLU
126
1
Y
1
B
CG
GLU
124
B
CG
GLU
127
1
Y
1
B
CD
GLU
124
B
CD
GLU
127
1
Y
1
B
OE1
GLU
124
B
OE1
GLU
127
1
Y
1
B
OE2
GLU
124
B
OE2
GLU
127
1
Y
1
B
CG
LEU
127
B
CG
LEU
130
1
Y
1
B
CD1
LEU
127
B
CD1
LEU
130
1
Y
1
B
CD2
LEU
127
B
CD2
LEU
130
1
Y
1
B
CG1
ILE
132
B
CG1
ILE
135
1
Y
1
B
CG2
ILE
132
B
CG2
ILE
135
1
Y
1
B
CD1
ILE
132
B
CD1
ILE
135
1
Y
1
B
CG
LYS
136
B
CG
LYS
139
1
Y
1
B
CD
LYS
136
B
CD
LYS
139
1
Y
1
B
CE
LYS
136
B
CE
LYS
139
1
Y
1
B
NZ
LYS
136
B
NZ
LYS
139
1
Y
1
B
CG
GLU
137
B
CG
GLU
140
1
Y
1
B
CD
GLU
137
B
CD
GLU
140
1
Y
1
B
OE1
GLU
137
B
OE1
GLU
140
1
Y
1
B
OE2
GLU
137
B
OE2
GLU
140
1
Y
1
C
N1
DT
17
C
N1
DT
17
1
Y
1
C
C2
DT
17
C
C2
DT
17
1
Y
1
C
O2
DT
17
C
O2
DT
17
1
Y
1
C
N3
DT
17
C
N3
DT
17
1
Y
1
C
C4
DT
17
C
C4
DT
17
1
Y
1
C
O4
DT
17
C
O4
DT
17
1
Y
1
C
C5
DT
17
C
C5
DT
17
1
Y
1
C
C7
DT
17
C
C7
DT
17
1
Y
1
C
C6
DT
17
C
C6
DT
17
1
Y
1
F
P
DG
22
E
P
DG
22
1
Y
1
F
OP1
DG
22
E
OP1
DG
22
1
Y
1
F
OP2
DG
22
E
OP2
DG
22
1
Y
1
A
GLY
-2
A
GLY
1
1
Y
1
A
PRO
-1
A
PRO
2
1
Y
1
A
GLY
22
A
GLY
25
1
Y
1
A
LYS
23
A
LYS
26
1
Y
1
A
GLY
24
A
GLY
27
1
Y
1
A
ALA
25
A
ALA
28
1
Y
1
A
HIS
117
A
HIS
120
1
Y
1
A
GLY
118
A
GLY
121
1
Y
1
A
HIS
119
A
HIS
122
1
Y
1
A
ALA
120
A
ALA
123
1
Y
1
A
ALA
121
A
ALA
124
1
Y
1
B
GLY
-2
B
GLY
1
1
Y
1
B
PRO
-1
B
PRO
2
1
Y
1
B
GLU
21
B
GLU
24
1
Y
1
B
GLY
22
B
GLY
25
1
Y
1
D
DT
13
D
DT
13
1
Y
1
D
DG
14
D
DG
14
1
Y
1
D
DG
15
D
DG
15
1
Y
1
D
DT
16
D
DT
16
1
Y
1
D
DT
17
D
DT
17
1
Y
1
D
DT
18
D
DT
18
1
Y
1
D
DC
19
D
DC
19
1
Y
1
D
DC
20
D
DC
20
1
Y
1
D
DA
21
D
DA
21
1
Y
1
D
DG
22
D
DG
22
1
Y
1
D
DA
23
D
DA
23
1
Y
1
D
DA
24
D
DA
24
1
Y
1
D
DA
25
D
DA
25
1
Y
1
D
DG
26
D
DG
26
1
Y
1
D
DC
27
D
DC
27
1
Y
1
D
DC
28
D
DC
28
1
Y
1
D
DG
29
D
DG
29
1
Y
1
D
DA
30
D
DA
30
1
Y
1
D
DT
31
D
DT
31
1
Y
1
D
DT
32
D
DT
32
1
Y
1
D
DG
33
D
DG
33
1
Y
1
F
DA
1
E
DA
1
1
Y
1
F
DT
2
E
DT
2
1
Y
1
F
DC
3
E
DC
3
1
Y
1
F
DT
4
E
DT
4
1
Y
1
F
DG
5
E
DG
5
1
Y
1
F
DC
6
E
DC
6
1
Y
1
F
DC
7
E
DC
7
1
Y
1
F
DG
8
E
DG
8
1
Y
1
F
DA
9
E
DA
9
1
Y
1
F
DT
10
E
DT
10
1
Y
1
F
DT
11
E
DT
11
1
Y
1
F
DC
12
E
DC
12
1
Y
1
F
DT
13
E
DT
13
1
Y
1
F
DG
14
E
DG
14
1
Y
1
F
DG
15
E
DG
15
1
Y
1
F
DT
16
E
DT
16
1
Y
1
F
DT
17
E
DT
17
1
Y
1
F
DT
18
E
DT
18
1
Y
1
F
DC
19
E
DC
19
1
Y
1
F
DC
20
E
DC
20
1
Y
1
F
DA
21
E
DA
21
1
Y
1
B
F
OG1
OP2
THR
DC
11
27
2.12
1
A
A
O
NH2
LYS
ARG
37
50
2.18
1
A
B
ND2
OD1
ASN
ASN
78
78
2.19
1
1.88
0.30
108.30
110.18
C
C
C
O4'
C1'
N1
DT
DT
DT
9
9
9
N
1
2.02
0.30
108.30
110.32
C
C
C
O4'
C1'
N9
DA
DA
DA
13
13
13
N
1
2.08
0.30
108.30
110.38
C
C
C
O4'
C1'
N1
DC
DC
DC
15
15
15
N
1
2.06
0.30
108.30
110.36
C
C
C
O4'
C1'
N1
DT
DT
DT
18
18
18
N
1
2.54
0.30
108.30
110.84
C
C
C
O4'
C1'
N9
DG
DG
DG
31
31
31
N
1
1.84
0.30
108.30
110.14
C
C
C
O4'
C1'
N9
DA
DA
DA
32
32
32
N
1
2.81
0.30
108.30
111.11
D
D
D
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
1.81
0.30
108.30
110.11
D
D
D
O4'
C1'
N1
DT
DT
DT
11
11
11
N
1
2.55
0.30
108.30
110.85
F
F
F
O4'
C1'
N9
DA
DA
DA
25
25
25
N
1
2.02
0.30
108.30
110.32
F
F
F
O4'
C1'
N9
DA
DA
DA
30
30
30
N
1
C
C
O3'
C3'
DC
DC
1
1
-0.043
0.006
1.419
1.376
N
1
C
C
O3'
C3'
DA
DA
2
2
-0.044
0.006
1.419
1.375
N
1
C
C
O3'
C3'
DG
DG
20
20
-0.056
0.006
1.419
1.363
N
1
D
D
O3'
C3'
DA
DA
1
1
-0.053
0.006
1.419
1.366
N
1
F
F
O3'
C3'
DC
DC
27
27
-0.059
0.006
1.419
1.360
N
1
A
HIS
32
-174.46
147.28
1
A
GLU
34
-172.24
149.11
1
A
ARG
61
-58.90
-70.32
1
A
ARG
63
37.19
63.93
1
A
ALA
115
-154.03
87.85
1
A
LEU
133
-99.87
-64.76
1
B
LEU
26
-67.18
89.78
1
B
GLU
34
-172.43
146.42
1
B
PRO
40
-57.73
9.04
1
B
ARG
63
33.07
67.93
1
B
LYS
136
-58.32
-72.80
0.2309
0.1812
0.1836
3.409
38.296
633
12660
5.00
99.57
0.46
1
FREE R-VALUE
1.36
MOLECULAR REPLACEMENT
26.52
0.90
1.11
4LD0
3.409
38.296
3
3479
2
1149
2325
0.010
3660
1.165
5216
19.651
1955
0.057
606
0.007
474
0.3735
0.2756
3.6721
123
2351
99.00
0.2994
0.2103
4.0413
126
2381
100.00
0.1971
0.1520
4.6252
125
2384
100.00
0.2295
0.1911
5.8240
127
2414
100.00
0.2060
0.1658
10.0
132
2497
99.00
3.4
38.3
6S16
12660
1.00
0.083
1
16.8
5.6
99.5
3.4
3.5
2003
0.717
0.11
1
refinement
PHENIX
(1.14_3260: ???)
data reduction
XDS
data scaling
XDS
phasing
PHASER
N
T. thermophilus RuvC in complex with Holliday junction substrate
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
A
PRO
43
A
PRO
46
HELX_P
A
ARG
63
A
ARG
66
1
AA1
21
A
GLN
77
A
GLN
80
HELX_P
A
GLY
99
A
GLY
102
1
AA2
23
A
GLY
106
A
GLY
109
HELX_P
A
GLN
112
A
GLN
115
1
AA3
7
A
GLU
123
A
GLU
126
HELX_P
A
GLY
134
A
GLY
137
1
AA4
12
A
PRO
141
A
PRO
144
HELX_P
A
MET
160
A
MET
163
1
AA5
20
B
PRO
43
B
PRO
46
HELX_P
B
ARG
63
B
ARG
66
1
AA6
21
B
GLN
77
B
GLN
80
HELX_P
B
GLY
99
B
GLY
102
1
AA7
23
B
GLY
106
B
GLY
109
HELX_P
B
ALA
115
B
ALA
118
1
AA8
10
B
ALA
121
B
ALA
124
HELX_P
B
GLY
134
B
GLY
137
1
AA9
14
B
PRO
141
B
PRO
144
HELX_P
B
MET
160
B
MET
163
1
AB1
20
hydrog
DC-DG PAIR
C
DC
1
C
O2
DC
1
1_555
F
DG
33
E
N2
DG
33
1_555
hydrog
WATSON-CRICK
C
DA
2
C
N1
DA
2
1_555
F
DT
32
E
N3
DT
32
1_555
hydrog
WATSON-CRICK
C
DA
2
C
N6
DA
2
1_555
F
DT
32
E
O4
DT
32
1_555
hydrog
WATSON-CRICK
C
DA
3
C
N1
DA
3
1_555
F
DT
31
E
N3
DT
31
1_555
hydrog
WATSON-CRICK
C
DA
3
C
N6
DA
3
1_555
F
DT
31
E
O4
DT
31
1_555
hydrog
WATSON-CRICK
C
DT
4
C
N3
DT
4
1_555
F
DA
30
E
N1
DA
30
1_555
hydrog
WATSON-CRICK
C
DT
4
C
O4
DT
4
1_555
F
DA
30
E
N6
DA
30
1_555
hydrog
DC-DG PAIR
C
DC
5
C
O2
DC
5
1_555
F
DG
29
E
N2
DG
29
1_555
hydrog
WATSON-CRICK
C
DG
6
C
N1
DG
6
1_555
F
DC
28
E
N3
DC
28
1_555
hydrog
WATSON-CRICK
C
DG
6
C
N2
DG
6
1_555
F
DC
28
E
O2
DC
28
1_555
hydrog
WATSON-CRICK
C
DG
6
C
O6
DG
6
1_555
F
DC
28
E
N4
DC
28
1_555
hydrog
WATSON-CRICK
C
DG
7
C
N1
DG
7
1_555
F
DC
27
E
N3
DC
27
1_555
hydrog
WATSON-CRICK
C
DG
7
C
N2
DG
7
1_555
F
DC
27
E
O2
DC
27
1_555
hydrog
WATSON-CRICK
C
DG
7
C
O6
DG
7
1_555
F
DC
27
E
N4
DC
27
1_555
hydrog
WATSON-CRICK
C
DC
8
C
N3
DC
8
1_555
F
DG
26
E
N1
DG
26
1_555
hydrog
WATSON-CRICK
C
DC
8
C
N4
DC
8
1_555
F
DG
26
E
O6
DG
26
1_555
hydrog
WATSON-CRICK
C
DC
8
C
O2
DC
8
1_555
F
DG
26
E
N2
DG
26
1_555
hydrog
WATSON-CRICK
C
DT
9
C
N3
DT
9
1_555
F
DA
25
E
N1
DA
25
1_555
hydrog
WATSON-CRICK
C
DT
9
C
O4
DT
9
1_555
F
DA
25
E
N6
DA
25
1_555
hydrog
WATSON-CRICK
C
DT
10
C
N3
DT
10
1_555
C
DA
24
C
N1
DA
24
1_555
hydrog
WATSON-CRICK
C
DT
10
C
O4
DT
10
1_555
C
DA
24
C
N6
DA
24
1_555
hydrog
WATSON-CRICK
C
DT
11
C
N3
DT
11
1_555
C
DA
23
C
N1
DA
23
1_555
hydrog
WATSON-CRICK
C
DT
11
C
O4
DT
11
1_555
C
DA
23
C
N6
DA
23
1_555
hydrog
WATSON-CRICK
C
DG
12
C
N1
DG
12
1_555
C
DC
22
C
N3
DC
22
1_555
hydrog
WATSON-CRICK
C
DG
12
C
N2
DG
12
1_555
C
DC
22
C
O2
DC
22
1_555
hydrog
WATSON-CRICK
C
DG
12
C
O6
DG
12
1_555
C
DC
22
C
N4
DC
22
1_555
hydrog
WATSON-CRICK
C
DA
13
C
N1
DA
13
1_555
C
DT
21
C
N3
DT
21
1_555
hydrog
WATSON-CRICK
C
DA
13
C
N6
DA
13
1_555
C
DT
21
C
O4
DT
21
1_555
hydrog
WATSON-CRICK
C
DC
14
C
N3
DC
14
1_555
C
DG
20
C
N1
DG
20
1_555
hydrog
WATSON-CRICK
C
DC
14
C
N4
DC
14
1_555
C
DG
20
C
O6
DG
20
1_555
hydrog
WATSON-CRICK
C
DC
14
C
O2
DC
14
1_555
C
DG
20
C
N2
DG
20
1_555
hydrog
WATSON-CRICK
C
DC
15
C
N3
DC
15
1_555
C
DG
19
C
N1
DG
19
1_555
hydrog
WATSON-CRICK
C
DC
15
C
N4
DC
15
1_555
C
DG
19
C
O6
DG
19
1_555
hydrog
WATSON-CRICK
C
DC
15
C
O2
DC
15
1_555
C
DG
19
C
N2
DG
19
1_555
hydrog
WATSON-CRICK
C
DT
25
C
N3
DT
25
1_555
D
DA
9
D
N1
DA
9
1_555
hydrog
WATSON-CRICK
C
DT
25
C
O4
DT
25
1_555
D
DA
9
D
N6
DA
9
1_555
hydrog
WATSON-CRICK
C
DC
26
C
N3
DC
26
1_555
D
DG
8
D
N1
DG
8
1_555
hydrog
WATSON-CRICK
C
DC
26
C
N4
DC
26
1_555
D
DG
8
D
O6
DG
8
1_555
hydrog
WATSON-CRICK
C
DC
26
C
O2
DC
26
1_555
D
DG
8
D
N2
DG
8
1_555
hydrog
DG-DC PAIR
C
DG
27
C
N2
DG
27
1_555
D
DC
7
D
O2
DC
7
1_555
hydrog
WATSON-CRICK
C
DG
28
C
N1
DG
28
1_555
D
DC
6
D
N3
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
28
C
N2
DG
28
1_555
D
DC
6
D
O2
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
28
C
O6
DG
28
1_555
D
DC
6
D
N4
DC
6
1_555
hydrog
WATSON-CRICK
C
DC
29
C
N3
DC
29
1_555
D
DG
5
D
N1
DG
5
1_555
hydrog
WATSON-CRICK
C
DC
29
C
N4
DC
29
1_555
D
DG
5
D
O6
DG
5
1_555
hydrog
WATSON-CRICK
C
DC
29
C
O2
DC
29
1_555
D
DG
5
D
N2
DG
5
1_555
hydrog
WATSON-CRICK
C
DA
30
C
N1
DA
30
1_555
D
DT
4
D
N3
DT
4
1_555
hydrog
WATSON-CRICK
C
DA
30
C
N6
DA
30
1_555
D
DT
4
D
O4
DT
4
1_555
hydrog
WATSON-CRICK
C
DG
31
C
N1
DG
31
1_555
D
DC
3
D
N3
DC
3
1_555
hydrog
WATSON-CRICK
C
DG
31
C
N2
DG
31
1_555
D
DC
3
D
O2
DC
3
1_555
hydrog
WATSON-CRICK
C
DG
31
C
O6
DG
31
1_555
D
DC
3
D
N4
DC
3
1_555
hydrog
WATSON-CRICK
C
DA
32
C
N1
DA
32
1_555
D
DT
2
D
N3
DT
2
1_555
hydrog
WATSON-CRICK
C
DA
32
C
N6
DA
32
1_555
D
DT
2
D
O4
DT
2
1_555
hydrog
WATSON-CRICK
D
DT
10
D
N3
DT
10
1_555
F
DA
24
E
N1
DA
24
1_555
hydrog
WATSON-CRICK
D
DT
10
D
O4
DT
10
1_555
F
DA
24
E
N6
DA
24
1_555
hydrog
WATSON-CRICK
D
DT
11
D
N3
DT
11
1_555
F
DA
23
E
N1
DA
23
1_555
hydrog
WATSON-CRICK
D
DT
11
D
O4
DT
11
1_555
F
DA
23
E
N6
DA
23
1_555
hydrog
WATSON-CRICK
D
DC
12
D
N3
DC
12
1_555
F
DG
22
E
N1
DG
22
1_555
hydrog
WATSON-CRICK
D
DC
12
D
N4
DC
12
1_555
F
DG
22
E
O6
DG
22
1_555
hydrog
WATSON-CRICK
D
DC
12
D
O2
DC
12
1_555
F
DG
22
E
N2
DG
22
1_555
HYDROLASE
RuvC resolvase Holliday junction, HYDROLASE
A
ARG
140
A
ARG
143
1
A
PRO
141
A
PRO
144
-5.87
B
ARG
140
B
ARG
143
1
B
PRO
141
B
PRO
144
6.57
RUVC_THET8
UNP
1
1
Q5SJC4
MVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNEL
AYKVGWALGAVLVAAFEAGVPVYAYGPMQVKQALAGHGHAAKEEVALMVRGILGLKEAPRPSHLADALAIALTHAFYARM
GTAKPL
6S16
PDB
2
1
6S16
6S16
PDB
3
1
6S16
1
166
6S16
1
166
Q5SJC4
A
1
4
169
1
166
6S16
1
166
Q5SJC4
B
1
4
169
1
33
6S16
1
33
6S16
C
2
1
33
1
33
6S16
1
33
6S16
D
3
1
33
1
33
6S16
1
33
6S16
F
3
1
33
1
expression tag
GLY
-2
6S16
A
Q5SJC4
UNP
1
1
expression tag
PRO
-1
6S16
A
Q5SJC4
UNP
2
1
expression tag
HIS
0
6S16
A
Q5SJC4
UNP
3
2
expression tag
GLY
-2
6S16
B
Q5SJC4
UNP
1
2
expression tag
PRO
-1
6S16
B
Q5SJC4
UNP
2
2
expression tag
HIS
0
6S16
B
Q5SJC4
UNP
3
5
5
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
A
ALA
28
A
ALA
31
A
LYS
37
A
LYS
40
A
HIS
12
A
HIS
15
A
VAL
20
A
VAL
23
A
MET
1
A
MET
4
A
ASP
7
A
ASP
10
A
VAL
67
A
VAL
70
A
GLU
70
A
GLU
73
A
VAL
102
A
VAL
105
A
TYR
105
A
TYR
108
B
ARG
29
B
ARG
32
B
LYS
37
B
LYS
40
B
HIS
12
B
HIS
15
B
ALA
19
B
ALA
22
B
VAL
2
B
VAL
5
B
ASP
7
B
ASP
10
B
ALA
66
B
ALA
69
B
GLU
70
B
GLU
73
B
VAL
102
B
VAL
105
B
TYR
105
B
TYR
108
binding site for residue NA A 201
A
NA
201
Software
3
binding site for residue CL B 201
B
CL
201
Software
2
A
VAL
102
A
VAL
105
3
1_555
A
LEU
166
A
LEU
169
3
1_555
B
PRO
43
B
PRO
46
3
1_555
B
SER
142
B
SER
145
2
1_555
B
HIS
143
B
HIS
146
2
1_555
154
P 32 2 1