0.008914
0.000000
0.001100
0.000000
0.027617
0.000000
0.000000
0.000000
0.032388
0.00000
0.00000
0.00000
Laulumaa, S.
Kursula, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
97.03
90.00
112.180
36.210
31.110
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O3 S
137.158
n
S-HYDROXYCYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C16 H32 O2
256.424
PALMITIC ACID
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C18 H34 O2
282.461
VACCENIC ACID
(11E)-OCTADEC-11-ENOIC ACID
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
S
N
78
N
C
N
79
N
O
N
80
N
O
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
N
N
142
S
C
N
143
N
C
N
144
N
O
N
145
S
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
S
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
Y
235
N
C
Y
236
N
C
Y
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
C
N
254
N
O
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
R
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
N
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
N
407
N
C
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
O
N
422
N
C
N
423
N
O
N
424
N
C
N
425
N
C
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
C
N
430
N
C
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
C
N
435
N
C
N
436
N
C
N
437
N
C
N
438
N
C
N
439
N
C
N
440
N
C
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
Y
228
N
doub
Y
229
N
sing
Y
230
N
sing
N
231
N
sing
Y
232
N
doub
N
233
N
sing
Y
234
N
doub
N
235
N
sing
Y
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
Y
374
N
doub
Y
375
N
sing
Y
376
N
sing
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
Z
doub
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
CH
Molecules
1420-3049
24
10.3390/molecules24173044
31443388
Sub-Atomic Resolution Crystal Structures Reveal Conserved Geometric Outliers at Functional Sites.
2019
10.2210/pdb6s2m/pdb
pdb_00006s2m
100
1
N
PIXEL
2013-09-27
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.7443
1.0
P11
PETRA III, DESY
0.7443
SYNCHROTRON
PETRA III, DESY BEAMLINE P11
15023.470
Myelin P2 protein
1
man
polymer
256.424
PALMITIC ACID
1
syn
non-polymer
282.461
VACCENIC ACID
1
syn
non-polymer
18.015
water
233
nat
water
Peripheral myelin protein 2
no
yes
GMSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNR
KTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAE(CSO)KMKGVV(CSO)TRIYEKV
GMSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNR
KTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTRIYEKV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
133
PMP2
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
2.09
41.07
VAPOR DIFFUSION, SITTING DROP
4.25
24% PEG6000, 0.1 M sodium citrate, pH 5
281
citation
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Database references
Refinement description
1
0
2019-08-28
1
1
2019-09-04
1
2
2024-01-24
_citation.journal_volume
_citation.pdbx_database_id_PubMed
_citation.title
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Finland
Sigrid Juselius Foundation
N
PDBE
Y
PDBE
2019-06-21
REL
REL
1
A
O
HOH
529
5.87
1
A
O
HOH
530
6.23
1
A
O
HOH
531
6.73
1
A
O
HOH
532
7.87
1
A
O
HOH
533
8.57
PLM
PALMITIC ACID
VCA
VACCENIC ACID
HOH
water
N
4BVM
PDB
experimental model
PLM
1
2
PLM
PLM
201
A
VCA
2
3
VCA
VCA
202
A
HOH
268
4
HOH
HOH
301
A
HOH
169
4
HOH
HOH
302
A
HOH
131
4
HOH
HOH
303
A
HOH
239
4
HOH
HOH
304
A
HOH
78
4
HOH
HOH
305
A
HOH
56
4
HOH
HOH
306
A
HOH
136
4
HOH
HOH
307
A
HOH
167
4
HOH
HOH
308
A
HOH
243
4
HOH
HOH
309
A
HOH
95
4
HOH
HOH
310
A
HOH
223
4
HOH
HOH
311
A
HOH
13
4
HOH
HOH
312
A
HOH
221
4
HOH
HOH
313
A
HOH
118
4
HOH
HOH
314
A
HOH
263
4
HOH
HOH
315
A
HOH
238
4
HOH
HOH
316
A
HOH
241
4
HOH
HOH
317
A
HOH
165
4
HOH
HOH
318
A
HOH
274
4
HOH
HOH
319
A
HOH
161
4
HOH
HOH
320
A
HOH
10
4
HOH
HOH
321
A
HOH
96
4
HOH
HOH
322
A
HOH
49
4
HOH
HOH
323
A
HOH
19
4
HOH
HOH
324
A
HOH
34
4
HOH
HOH
325
A
HOH
146
4
HOH
HOH
326
A
HOH
40
4
HOH
HOH
327
A
HOH
160
4
HOH
HOH
328
A
HOH
4
4
HOH
HOH
329
A
HOH
87
4
HOH
HOH
330
A
HOH
134
4
HOH
HOH
331
A
HOH
186
4
HOH
HOH
332
A
HOH
54
4
HOH
HOH
333
A
HOH
149
4
HOH
HOH
334
A
HOH
43
4
HOH
HOH
335
A
HOH
218
4
HOH
HOH
336
A
HOH
220
4
HOH
HOH
337
A
HOH
22
4
HOH
HOH
338
A
HOH
11
4
HOH
HOH
339
A
HOH
50
4
HOH
HOH
340
A
HOH
23
4
HOH
HOH
341
A
HOH
94
4
HOH
HOH
342
A
HOH
35
4
HOH
HOH
343
A
HOH
145
4
HOH
HOH
344
A
HOH
42
4
HOH
HOH
345
A
HOH
204
4
HOH
HOH
346
A
HOH
32
4
HOH
HOH
347
A
HOH
133
4
HOH
HOH
348
A
HOH
38
4
HOH
HOH
349
A
HOH
158
4
HOH
HOH
350
A
HOH
121
4
HOH
HOH
351
A
HOH
71
4
HOH
HOH
352
A
HOH
205
4
HOH
HOH
353
A
HOH
2
4
HOH
HOH
354
A
HOH
14
4
HOH
HOH
355
A
HOH
7
4
HOH
HOH
356
A
HOH
250
4
HOH
HOH
357
A
HOH
80
4
HOH
HOH
358
A
HOH
143
4
HOH
HOH
359
A
HOH
55
4
HOH
HOH
360
A
HOH
277
4
HOH
HOH
361
A
HOH
3
4
HOH
HOH
362
A
HOH
48
4
HOH
HOH
363
A
HOH
203
4
HOH
HOH
364
A
HOH
68
4
HOH
HOH
365
A
HOH
97
4
HOH
HOH
366
A
HOH
126
4
HOH
HOH
367
A
HOH
93
4
HOH
HOH
368
A
HOH
105
4
HOH
HOH
369
A
HOH
276
4
HOH
HOH
370
A
HOH
193
4
HOH
HOH
371
A
HOH
12
4
HOH
HOH
372
A
HOH
60
4
HOH
HOH
373
A
HOH
75
4
HOH
HOH
374
A
HOH
36
4
HOH
HOH
375
A
HOH
242
4
HOH
HOH
376
A
HOH
69
4
HOH
HOH
377
A
HOH
37
4
HOH
HOH
378
A
HOH
51
4
HOH
HOH
379
A
HOH
73
4
HOH
HOH
380
A
HOH
15
4
HOH
HOH
381
A
HOH
202
4
HOH
HOH
382
A
HOH
39
4
HOH
HOH
383
A
HOH
5
4
HOH
HOH
384
A
HOH
33
4
HOH
HOH
385
A
HOH
168
4
HOH
HOH
386
A
HOH
117
4
HOH
HOH
387
A
HOH
233
4
HOH
HOH
388
A
HOH
113
4
HOH
HOH
389
A
HOH
9
4
HOH
HOH
390
A
HOH
122
4
HOH
HOH
391
A
HOH
6
4
HOH
HOH
392
A
HOH
163
4
HOH
HOH
393
A
HOH
24
4
HOH
HOH
394
A
HOH
63
4
HOH
HOH
395
A
HOH
66
4
HOH
HOH
396
A
HOH
253
4
HOH
HOH
397
A
HOH
27
4
HOH
HOH
398
A
HOH
209
4
HOH
HOH
399
A
HOH
148
4
HOH
HOH
400
A
HOH
155
4
HOH
HOH
401
A
HOH
45
4
HOH
HOH
402
A
HOH
18
4
HOH
HOH
403
A
HOH
91
4
HOH
HOH
404
A
HOH
61
4
HOH
HOH
405
A
HOH
74
4
HOH
HOH
406
A
HOH
81
4
HOH
HOH
407
A
HOH
77
4
HOH
HOH
408
A
HOH
29
4
HOH
HOH
409
A
HOH
72
4
HOH
HOH
410
A
HOH
83
4
HOH
HOH
411
A
HOH
116
4
HOH
HOH
412
A
HOH
64
4
HOH
HOH
413
A
HOH
175
4
HOH
HOH
414
A
HOH
112
4
HOH
HOH
415
A
HOH
46
4
HOH
HOH
416
A
HOH
228
4
HOH
HOH
417
A
HOH
41
4
HOH
HOH
418
A
HOH
123
4
HOH
HOH
419
A
HOH
90
4
HOH
HOH
420
A
HOH
187
4
HOH
HOH
421
A
HOH
265
4
HOH
HOH
422
A
HOH
120
4
HOH
HOH
423
A
HOH
290
4
HOH
HOH
424
A
HOH
103
4
HOH
HOH
425
A
HOH
76
4
HOH
HOH
426
A
HOH
251
4
HOH
HOH
427
A
HOH
21
4
HOH
HOH
428
A
HOH
106
4
HOH
HOH
429
A
HOH
107
4
HOH
HOH
430
A
HOH
104
4
HOH
HOH
431
A
HOH
53
4
HOH
HOH
432
A
HOH
26
4
HOH
HOH
433
A
HOH
52
4
HOH
HOH
434
A
HOH
82
4
HOH
HOH
435
A
HOH
65
4
HOH
HOH
436
A
HOH
31
4
HOH
HOH
437
A
HOH
8
4
HOH
HOH
438
A
HOH
20
4
HOH
HOH
439
A
HOH
206
4
HOH
HOH
440
A
HOH
30
4
HOH
HOH
441
A
HOH
217
4
HOH
HOH
442
A
HOH
59
4
HOH
HOH
443
A
HOH
127
4
HOH
HOH
444
A
HOH
108
4
HOH
HOH
445
A
HOH
84
4
HOH
HOH
446
A
HOH
147
4
HOH
HOH
447
A
HOH
139
4
HOH
HOH
448
A
HOH
86
4
HOH
HOH
449
A
HOH
135
4
HOH
HOH
450
A
HOH
79
4
HOH
HOH
451
A
HOH
225
4
HOH
HOH
452
A
HOH
256
4
HOH
HOH
453
A
HOH
191
4
HOH
HOH
454
A
HOH
57
4
HOH
HOH
455
A
HOH
111
4
HOH
HOH
456
A
HOH
44
4
HOH
HOH
457
A
HOH
16
4
HOH
HOH
458
A
HOH
190
4
HOH
HOH
459
A
HOH
254
4
HOH
HOH
460
A
HOH
109
4
HOH
HOH
461
A
HOH
291
4
HOH
HOH
462
A
HOH
137
4
HOH
HOH
463
A
HOH
125
4
HOH
HOH
464
A
HOH
248
4
HOH
HOH
465
A
HOH
172
4
HOH
HOH
466
A
HOH
275
4
HOH
HOH
467
A
HOH
132
4
HOH
HOH
468
A
HOH
244
4
HOH
HOH
469
A
HOH
89
4
HOH
HOH
470
A
HOH
192
4
HOH
HOH
471
A
HOH
281
4
HOH
HOH
472
A
HOH
124
4
HOH
HOH
473
A
HOH
141
4
HOH
HOH
474
A
HOH
130
4
HOH
HOH
475
A
HOH
98
4
HOH
HOH
476
A
HOH
110
4
HOH
HOH
477
A
HOH
232
4
HOH
HOH
478
A
HOH
174
4
HOH
HOH
479
A
HOH
235
4
HOH
HOH
480
A
HOH
171
4
HOH
HOH
481
A
HOH
273
4
HOH
HOH
482
A
HOH
17
4
HOH
HOH
483
A
HOH
100
4
HOH
HOH
484
A
HOH
246
4
HOH
HOH
485
A
HOH
164
4
HOH
HOH
486
A
HOH
270
4
HOH
HOH
487
A
HOH
99
4
HOH
HOH
488
A
HOH
222
4
HOH
HOH
489
A
HOH
92
4
HOH
HOH
490
A
HOH
229
4
HOH
HOH
491
A
HOH
170
4
HOH
HOH
492
A
HOH
144
4
HOH
HOH
493
A
HOH
262
4
HOH
HOH
494
A
HOH
62
4
HOH
HOH
495
A
HOH
208
4
HOH
HOH
496
A
HOH
159
4
HOH
HOH
497
A
HOH
185
4
HOH
HOH
498
A
HOH
198
4
HOH
HOH
499
A
HOH
129
4
HOH
HOH
500
A
HOH
257
4
HOH
HOH
501
A
HOH
271
4
HOH
HOH
502
A
HOH
102
4
HOH
HOH
503
A
HOH
178
4
HOH
HOH
504
A
HOH
85
4
HOH
HOH
505
A
HOH
114
4
HOH
HOH
506
A
HOH
287
4
HOH
HOH
507
A
HOH
151
4
HOH
HOH
508
A
HOH
200
4
HOH
HOH
509
A
HOH
162
4
HOH
HOH
510
A
HOH
183
4
HOH
HOH
511
A
HOH
252
4
HOH
HOH
512
A
HOH
259
4
HOH
HOH
513
A
HOH
115
4
HOH
HOH
514
A
HOH
70
4
HOH
HOH
515
A
HOH
119
4
HOH
HOH
516
A
HOH
138
4
HOH
HOH
517
A
HOH
88
4
HOH
HOH
518
A
HOH
58
4
HOH
HOH
519
A
HOH
278
4
HOH
HOH
520
A
HOH
189
4
HOH
HOH
521
A
HOH
255
4
HOH
HOH
522
A
HOH
173
4
HOH
HOH
523
A
HOH
234
4
HOH
HOH
524
A
HOH
230
4
HOH
HOH
525
A
HOH
196
4
HOH
HOH
526
A
HOH
142
4
HOH
HOH
527
A
HOH
188
4
HOH
HOH
528
A
HOH
152
4
HOH
HOH
529
A
HOH
272
4
HOH
HOH
530
A
HOH
216
4
HOH
HOH
531
A
HOH
297
4
HOH
HOH
532
A
HOH
296
4
HOH
HOH
533
A
GLY
-1
n
1
GLY
-1
A
MET
0
n
2
MET
0
A
SER
1
n
3
SER
1
A
ASN
2
n
4
ASN
2
A
LYS
3
n
5
LYS
3
A
PHE
4
n
6
PHE
4
A
LEU
5
n
7
LEU
5
A
GLY
6
n
8
GLY
6
A
THR
7
n
9
THR
7
A
TRP
8
n
10
TRP
8
A
LYS
9
n
11
LYS
9
A
LEU
10
n
12
LEU
10
A
VAL
11
n
13
VAL
11
A
SER
12
n
14
SER
12
A
SER
13
n
15
SER
13
A
GLU
14
n
16
GLU
14
A
ASN
15
n
17
ASN
15
A
PHE
16
n
18
PHE
16
A
ASP
17
n
19
ASP
17
A
ASP
18
n
20
ASP
18
A
TYR
19
n
21
TYR
19
A
MET
20
n
22
MET
20
A
LYS
21
n
23
LYS
21
A
ALA
22
n
24
ALA
22
A
LEU
23
n
25
LEU
23
A
GLY
24
n
26
GLY
24
A
VAL
25
n
27
VAL
25
A
GLY
26
n
28
GLY
26
A
LEU
27
n
29
LEU
27
A
ALA
28
n
30
ALA
28
A
THR
29
n
31
THR
29
A
ARG
30
n
32
ARG
30
A
LYS
31
n
33
LYS
31
A
LEU
32
n
34
LEU
32
A
GLY
33
n
35
GLY
33
A
ASN
34
n
36
ASN
34
A
LEU
35
n
37
LEU
35
A
ALA
36
n
38
ALA
36
A
LYS
37
n
39
LYS
37
A
PRO
38
n
40
PRO
38
A
THR
39
n
41
THR
39
A
VAL
40
n
42
VAL
40
A
ILE
41
n
43
ILE
41
A
ILE
42
n
44
ILE
42
A
SER
43
n
45
SER
43
A
LYS
44
n
46
LYS
44
A
LYS
45
n
47
LYS
45
A
GLY
46
n
48
GLY
46
A
ASP
47
n
49
ASP
47
A
ILE
48
n
50
ILE
48
A
ILE
49
n
51
ILE
49
A
THR
50
n
52
THR
50
A
ILE
51
n
53
ILE
51
A
ARG
52
n
54
ARG
52
A
THR
53
n
55
THR
53
A
GLU
54
n
56
GLU
54
A
SER
55
n
57
SER
55
A
THR
56
n
58
THR
56
A
PHE
57
n
59
PHE
57
A
LYS
58
n
60
LYS
58
A
ASN
59
n
61
ASN
59
A
THR
60
n
62
THR
60
A
GLU
61
n
63
GLU
61
A
ILE
62
n
64
ILE
62
A
SER
63
n
65
SER
63
A
PHE
64
n
66
PHE
64
A
LYS
65
n
67
LYS
65
A
LEU
66
n
68
LEU
66
A
GLY
67
n
69
GLY
67
A
GLN
68
n
70
GLN
68
A
GLU
69
n
71
GLU
69
A
PHE
70
n
72
PHE
70
A
GLU
71
n
73
GLU
71
A
GLU
72
n
74
GLU
72
A
THR
73
n
75
THR
73
A
THR
74
n
76
THR
74
A
ALA
75
n
77
ALA
75
A
ASP
76
n
78
ASP
76
A
ASN
77
n
79
ASN
77
A
ARG
78
n
80
ARG
78
A
LYS
79
n
81
LYS
79
A
THR
80
n
82
THR
80
A
LYS
81
n
83
LYS
81
A
SER
82
n
84
SER
82
A
ILE
83
n
85
ILE
83
A
VAL
84
n
86
VAL
84
A
THR
85
n
87
THR
85
A
LEU
86
n
88
LEU
86
A
GLN
87
n
89
GLN
87
A
ARG
88
n
90
ARG
88
A
GLY
89
n
91
GLY
89
A
SER
90
n
92
SER
90
A
LEU
91
n
93
LEU
91
A
ASN
92
n
94
ASN
92
A
GLN
93
n
95
GLN
93
A
VAL
94
n
96
VAL
94
A
GLN
95
n
97
GLN
95
A
ARG
96
n
98
ARG
96
A
TRP
97
n
99
TRP
97
A
ASP
98
n
100
ASP
98
A
GLY
99
n
101
GLY
99
A
LYS
100
n
102
LYS
100
A
GLU
101
n
103
GLU
101
A
THR
102
n
104
THR
102
A
THR
103
n
105
THR
103
A
ILE
104
n
106
ILE
104
A
LYS
105
n
107
LYS
105
A
ARG
106
n
108
ARG
106
A
LYS
107
n
109
LYS
107
A
LEU
108
n
110
LEU
108
A
VAL
109
n
111
VAL
109
A
ASN
110
n
112
ASN
110
A
GLY
111
n
113
GLY
111
A
LYS
112
n
114
LYS
112
A
MET
113
n
115
MET
113
A
VAL
114
n
116
VAL
114
A
ALA
115
n
117
ALA
115
A
GLU
116
n
118
GLU
116
A
CSO
117
n
119
CSO
117
A
LYS
118
n
120
LYS
118
A
MET
119
n
121
MET
119
A
LYS
120
n
122
LYS
120
A
GLY
121
n
123
GLY
121
A
VAL
122
n
124
VAL
122
A
VAL
123
n
125
VAL
123
A
CSO
124
n
126
CSO
124
A
THR
125
n
127
THR
125
A
ARG
126
n
128
ARG
126
A
ILE
127
n
129
ILE
127
A
TYR
128
n
130
TYR
128
A
GLU
129
n
131
GLU
129
A
LYS
130
n
132
LYS
130
A
VAL
131
n
133
VAL
131
A
author_and_software_defined_assembly
PISA
1
monomeric
The protein is monomeric in solution.
SAXS
1640
5
7230
A
CSO
117
modified residue
A
CSO
119
CYS
A
CSO
124
modified residue
A
CSO
126
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
64
A
O
PHE
66
A
N
ILE
49
A
N
ILE
51
A
O
ARG
52
A
O
ARG
54
A
N
ILE
41
A
N
ILE
43
A
O
ILE
42
A
O
ILE
44
A
N
GLY
6
A
N
GLY
8
A
N
SER
12
A
N
SER
14
A
O
ILE
127
A
O
ILE
129
A
O
ARG
126
A
O
ARG
128
A
N
ALA
115
A
N
ALA
117
A
O
GLU
116
A
O
GLU
118
A
N
LYS
105
A
N
LYS
107
A
O
ILE
104
A
O
ILE
106
A
N
GLN
93
A
N
GLN
95
A
O
ASN
92
A
O
ASN
94
A
N
THR
85
A
N
THR
87
A
O
SER
82
A
O
SER
84
A
N
PHE
70
A
N
PHE
72
1
A
A
O
O
HOH
HOH
454
507
2.10
1
3.02
0.50
120.30
123.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
78
78
78
N
1
-3.31
0.50
120.30
116.99
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
96
96
96
B
B
B
N
1
A
ASP
98
A
55.94
-126.08
1
A
LYS
120
B
50.25
-136.92
0.1107
0.1042
0.1043
0.720
27.834
1621
162057
1.00
90.75
0.08
1
FREE R-VALUE
1.36
MOLECULAR REPLACEMENT
17.08
0.90
1.11
4bvm
0.720
27.834
233
1321
38
0
1050
0.020
1682
1.763
2279
20.687
695
0.107
253
0.012
300
0.3729
0.3739
0.7412
80
7953
54.00
0.2865
0.3297
0.7651
112
10958
75.00
0.3040
0.2892
0.7924
135
13424
92.00
0.2636
0.2364
0.8242
141
13879
94.00
0.2017
0.1854
0.8617
140
13735
94.00
0.1367
0.1244
0.9071
143
14093
96.00
0.1230
0.0943
0.9639
139
13923
95.00
0.0815
0.0683
1.0384
145
14314
97.00
0.0660
0.0555
1.1429
143
14230
97.00
0.0733
0.0603
1.3082
144
14483
98.00
0.1002
0.0908
1.6482
150
14683
99.00
0.1106
0.1103
27.8548
149
14761
98.00
9.0
0.72
50
6S2M
162608
0.999
0.039
0.036
1
15.8
4.7
91.0
0.72
0.74
0.9
6984
0.405
1.435
1.214
1
3.3
53.2
refinement
PHENIX
(1.14_3260: ???)
data reduction
XDS
data scaling
XSCALE
phasing
PHASER
N
Perdeuterated human myelin protein P2 at 0.72-A resolution
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
1
A
SER
3
HELX_P
A
LEU
5
A
LEU
7
5
AA1
5
A
ASN
15
A
ASN
17
HELX_P
A
LEU
23
A
LEU
25
1
AA2
9
A
GLY
26
A
GLY
28
HELX_P
A
ALA
36
A
ALA
38
1
AA3
11
covale
1.334
both
A
A
A
GLU
116
A
C
GLU
118
1_555
A
CSO
117
A
N
CSO
119
1_555
covale
1.302
both
B
B
A
GLU
116
A
C
GLU
118
1_555
A
CSO
117
A
N
CSO
119
1_555
covale
1.318
both
A
A
A
CSO
117
A
C
CSO
119
1_555
A
LYS
118
A
N
LYS
120
1_555
covale
1.313
both
B
B
A
CSO
117
A
C
CSO
119
1_555
A
LYS
118
A
N
LYS
120
1_555
covale
1.321
both
A
A
VAL
123
A
C
VAL
125
1_555
A
CSO
124
A
N
CSO
126
1_555
covale
1.348
both
B
A
VAL
123
A
C
VAL
125
1_555
A
CSO
124
A
N
CSO
126
1_555
covale
1.341
both
A
A
A
CSO
124
A
C
CSO
126
1_555
A
THR
125
A
N
THR
127
1_555
covale
1.347
both
B
B
A
CSO
124
A
C
CSO
126
1_555
A
THR
125
A
N
THR
127
1_555
LIPID BINDING PROTEIN
FABP, beta barrel, deuteration, fatty acid, LIPID BINDING PROTEIN
MYP2_HUMAN
UNP
1
1
P02689
MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNRK
TKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTRIYEKV
1
132
6S2M
0
131
P02689
A
1
2
133
1
expression tag
GLY
-1
6S2M
A
P02689
UNP
1
10
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
59
A
ASN
61
A
PHE
64
A
PHE
66
A
ILE
48
A
ILE
50
A
GLU
54
A
GLU
56
A
THR
39
A
THR
41
A
LYS
45
A
LYS
47
A
GLY
6
A
GLY
8
A
GLU
14
A
GLU
16
A
VAL
122
A
VAL
124
A
LYS
130
A
LYS
132
A
LYS
112
A
LYS
114
A
MET
119
A
MET
121
A
LYS
100
A
LYS
102
A
VAL
109
A
VAL
111
A
SER
90
A
SER
92
A
TRP
97
A
TRP
99
A
LYS
79
A
LYS
81
A
GLN
87
A
GLN
89
A
PHE
70
A
PHE
72
A
THR
73
A
THR
75
binding site for residue PLM A 201
A
PLM
201
Software
10
binding site for residue VCA A 202
A
VCA
202
Software
16
A
MET
20
A
MET
22
10
1_555
A
GLY
33
A
GLY
35
10
1_555
A
SER
55
A
SER
57
10
1_555
A
ALA
75
A
ALA
77
10
1_555
A
ARG
106
A
ARG
108
10
1_555
A
ARG
126
A
ARG
128
10
1_555
A
TYR
128
A
TYR
130
10
1_555
A
VCA
202
C
VCA
10
1_555
A
HOH
338
D
HOH
10
1_555
A
HOH
382
D
HOH
10
1_555
A
PHE
16
A
PHE
18
16
1_555
A
MET
20
A
MET
22
16
1_555
A
THR
29
A
THR
31
16
1_555
A
GLY
33
A
GLY
35
16
1_555
A
THR
53
A
THR
55
16
1_555
A
SER
55
A
SER
57
16
1_555
A
LYS
58
A
LYS
60
16
1_555
A
ALA
75
A
ALA
77
16
1_555
A
ASP
76
A
ASP
78
16
1_555
A
ARG
106
A
ARG
108
16
1_555
A
CSO
117
A
CSO
119
16
1_555
A
ARG
126
A
ARG
128
16
1_555
A
TYR
128
A
TYR
130
16
1_555
A
PLM
201
B
PLM
16
1_555
A
HOH
338
D
HOH
16
1_555
A
HOH
382
D
HOH
16
1_555
5
C 1 2 1