0.030303 0.000000 0.000000 0.000000 0.017857 0.000000 0.000000 0.000000 0.006211 0.000000 0.000000 0.000000 Sussman, J.L. Holbrook, S.R. Warrant, R.W. Church, G.M. Kim, S.-H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 33.000 56.000 161.000 C11 H16 N5 O7 P 361.248 n 6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE RNA linking C11 H16 N5 O8 P 377.247 n 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H16 N3 O8 P 337.223 n 5-METHYLCYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H15 N2 O9 P 338.208 n 5-METHYLURIDINE 5'-MONOPHOSPHATE RNA linking C11 H18 N5 O8 P 379.263 n 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H15 N2 O9 P 326.197 n 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE RNA linking H2 O 18.015 WATER non-polymer C12 H18 N5 O8 P 391.274 n N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE RNA linking Mg 2 24.305 MAGNESIUM ION non-polymer C10 H16 N3 O8 P 337.223 n O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE RNA linking C11 H16 N5 O8 P 377.247 n O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 n PSEUDOURIDINE-5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C21 H29 N6 O12 P 588.462 n WYBUTOSINE Y-BASE; 1H-IMIDAZO(1,2-ALPHA)PURINE-7-BUTANOIC ACID,4,9-DIHYDRO-ALPHA-((METHOXYCARBONYL)AMINO)-4,6-DIMETHYL-9-OXO-METHYL ESTER RNA linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C N 18 N C N 19 N N N 20 N N N 21 N C N 22 N C N 23 N N Y 24 N C N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N P N 42 N O N 43 N O N 44 N O N 45 N O N 46 N C N 47 R C N 48 N O N 49 S C N 50 N O N 51 R C N 52 N O N 53 R C Y 54 N N Y 55 N C Y 56 N N Y 57 N C N 58 N C N 59 N O N 60 N N N 61 N C N 62 N N N 63 N C N 64 N N Y 65 N C N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N P N 83 N O N 84 N O N 85 N O N 86 N O N 87 N C N 88 R C N 89 N O N 90 S C N 91 N O N 92 R C N 93 N O N 94 R C N 95 N N N 96 N C N 97 N O N 98 N N N 99 N C N 100 N N N 101 N C N 102 N C N 103 N C N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N N N 121 N C N 122 N N N 123 N C N 124 N C N 125 N C N 126 N C N 127 N O N 128 N O N 129 R C N 130 R C N 131 N O N 132 S C N 133 R C N 134 N O N 135 N O N 136 N C N 137 N O N 138 N P N 139 N O N 140 N O N 141 N O N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N P N 158 N O N 159 N O N 160 N O N 161 N O N 162 N C N 163 R C N 164 N O N 165 S C N 166 N O N 167 R C N 168 N O N 169 R C N 170 N N N 171 N C N 172 N N N 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N N 180 N C N 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N O N 201 N P N 202 N O N 203 N O N 204 N O N 205 N C N 206 R C N 207 N O N 208 S C N 209 N O N 210 R C N 211 N O N 212 R C Y 213 N N Y 214 N C Y 215 N N Y 216 N C Y 217 N C N 218 N N Y 219 N N Y 220 N C Y 221 N N Y 222 N C N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N O N 238 N P N 239 N O N 240 N O N 241 N O N 242 N C N 243 R C N 244 N O N 245 S C N 246 N O N 247 R C N 248 N O N 249 R C N 250 N N N 251 N C N 252 N O N 253 N N N 254 N C N 255 N N N 256 N C N 257 N C N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N O N 273 N P N 274 N O N 275 N O N 276 N O N 277 N C N 278 R C N 279 N O N 280 S C N 281 N O N 282 R C N 283 N O N 284 R C Y 285 N N Y 286 N C Y 287 N N Y 288 N C N 289 N C N 290 N O N 291 N N N 292 N C N 293 N N N 294 N N Y 295 N C N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N P N 311 N O N 312 N O N 313 N O N 314 N O N 315 N C N 316 R C N 317 N O N 318 S C N 319 N O N 320 R C N 321 R C N 322 N O N 323 N N N 324 N C N 325 N O N 326 N N N 327 N C N 328 N O N 329 N C N 330 N C N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N O N 347 N H N 348 N H N 349 N P N 350 N O N 351 N O N 352 N O N 353 N O N 354 N C N 355 R C N 356 N O N 357 S C N 358 N O N 359 R C N 360 N O N 361 R C Y 362 N N Y 363 N C Y 364 N N Y 365 N C N 366 N C N 367 N O N 368 N N N 369 N C N 370 N N N 371 N N Y 372 N C N 373 N C N 374 N C N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N MG N 394 N N N 395 N C N 396 N N N 397 N C N 398 N C N 399 N C N 400 N O N 401 N N N 402 R C N 403 R C N 404 N O N 405 N C N 406 R C N 407 R C N 408 N O N 409 N O N 410 N C N 411 N O N 412 N P N 413 N O N 414 N O N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N P N 433 N O N 434 N O N 435 N O N 436 N O N 437 N C N 438 R C N 439 N O N 440 R C N 441 N O N 442 R C N 443 N O N 444 N C N 445 R C Y 446 N N Y 447 N C Y 448 N N Y 449 N C N 450 N C N 451 N O N 452 N N N 453 N C N 454 N N N 455 N N Y 456 N C N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N N N 474 N C N 475 N N N 476 N C N 477 N C N 478 N C N 479 N O N 480 N O N 481 S C N 482 R C N 483 N O N 484 S C N 485 R C N 486 N O N 487 N O N 488 N C N 489 N O N 490 N P N 491 N O N 492 N O N 493 N O N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N O N 508 N P N 509 N O N 510 N O N 511 N O N 512 N C N 513 R C N 514 N O N 515 S C N 516 N O N 517 R C N 518 N O N 519 R C N 520 N N N 521 N C N 522 N O N 523 N N N 524 N C N 525 N O N 526 N C N 527 N C N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H Y 541 N N Y 542 N N Y 543 N C N 544 N N N 545 N C Y 546 N C Y 547 N C N 548 N C N 549 N O Y 550 N N Y 551 N C Y 552 N N N 553 N C Y 554 N C Y 555 N C N 556 N C N 557 N C N 558 R C N 559 N C N 560 N O N 561 N O N 562 N C N 563 N N N 564 N C N 565 N O N 566 N O N 567 N C N 568 R C N 569 R C N 570 N O N 571 S C N 572 N O N 573 R C N 574 N O N 575 N C N 576 N O N 577 N P N 578 N O N 579 N O N 580 N O N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N H N 587 N H N 588 N H N 589 N H N 590 N H N 591 N H N 592 N H N 593 N H N 594 N H N 595 N H N 596 N H N 597 N H N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 603 N H N 604 N H N 605 N H N 606 N H N 607 N H N 608 N H N 609 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing N 30 N sing Y 31 N doub N 32 N doub N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N doub N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing Y 67 N sing Y 68 N sing Y 69 N doub N 70 N sing Y 71 N sing N 72 N sing Y 73 N doub N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing Y 232 N sing Y 233 N sing Y 234 N doub N 235 N sing Y 236 N sing Y 237 N sing Y 238 N doub N 239 N sing Y 240 N doub N 241 N sing N 242 N sing Y 243 N sing Y 244 N doub N 245 N sing Y 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing Y 307 N sing Y 308 N sing Y 309 N doub N 310 N sing Y 311 N sing N 312 N sing Y 313 N doub N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing Y 386 N sing Y 387 N sing Y 388 N doub N 389 N sing Y 390 N sing N 391 N sing Y 392 N doub N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N doub N 413 N doub N 414 N sing N 415 N sing N 416 N doub N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N doub N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N doub N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing Y 474 N sing Y 475 N sing Y 476 N doub N 477 N sing Y 478 N sing N 479 N sing Y 480 N doub N 481 N doub N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N doub N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N doub N 495 N sing N 496 N sing N 497 N sing N 498 N doub N 499 N doub N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N doub N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N doub N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N doub N 552 N sing N 553 N sing N 554 N sing N 555 N doub N 556 N sing N 557 N doub N 558 N sing N 559 N sing Y 560 N sing N 561 N sing Y 562 N sing Y 563 N doub Y 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing Y 571 N doub Y 572 N sing N 573 N sing Y 574 N sing N 575 N doub Y 576 N doub Y 577 N sing N 578 N sing N 579 N sing N 580 N sing N 581 N sing N 582 N sing N 583 N sing Y 584 N doub N 585 N sing N 586 N sing N 587 N sing N 588 N sing N 589 N sing N 590 N sing N 591 N sing N 592 N sing N 593 N sing N 594 N sing N 595 N doub N 596 N sing N 597 N sing N 598 N sing N 599 N sing N 600 N sing N 601 N sing N 602 N sing N 603 N doub N 604 N sing N 605 N sing N 606 N sing N 607 N sing N 608 N sing N 609 N sing N 610 N sing N 611 N sing N 612 N sing N 613 N sing N 614 N sing N 615 N sing N 616 N sing N 617 N sing N 618 N sing N 619 N sing N 620 N sing N 621 N sing N 622 N sing N 623 N sing N 624 N sing N 625 N sing N 626 N sing N 627 N doub N 628 N sing N 629 N sing N 630 N sing N 631 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 123 607 630 10.1016/0022-2836(78)90209-7 357742 Crystal structure of yeast phenylalanine transfer RNA. I. Crystallographic refinement. 1978 UK J.Mol.Biol. JMOBAK 0070 0022-2836 123 631 660 Crystal Structure of Yeast Phenylalanine T-RNA. II.Structural Features and Functional Implications 1978 US Adv.Enzymol.Relat.Areas Mol.Biol. AERAAD 0917 0065-258X 46 279 315 Three Dimensional Structure of T-RNA and Its Functional Implications 1978 US Sci.Am. SCAMAC 0420 0036-8733 238 52 62 The Three-Dimensional Structure of Transfer RNA 1978 MIT Press, Cambridge, Massachusetts Transfer RNA 0974 0262-01056-9 Crystal Structure of Yeast Phenylalanine T-RNA, Its Correlation to the Solution Structure and the Functional Implications 1978 UK Nucleic Acids Res. NARHAD 0389 0305-1048 4 2811 2820 RNA-Ligand Interactions. (1) Magnesium Binding Sites in Yeast T-RNA-PHE 1977 US Biochem.Biophys.Res.Commun. BBRCA9 0146 0006-291X 68 89 96 Idealized Atomic Coordinates of Yeast Phenylalanine Transfer RNA 1976 US Science SCIEAS 0038 0036-8075 192 853 858 Three-Dimensional Structure of a Transfer RNA in Two Crystal Forms 1976 National Biomedical Research Foundation, Silver Spring,Md. Atlas of Protein Sequence and Structure (Data Section) 0435 0-912466-02-2 5 347 1972 10.2210/pdb6tna/pdb pdb_00006tna 0.870900 -0.435700 0.227000 0.490400 0.803000 -0.339700 -0.034700 0.406600 0.912900 5.551400 7.130000 -1.278000 1 x-ray 1 1.0 24890.121 TRNAPHE 1 nat polymer 24.305 MAGNESIUM ION 4 syn non-polymer 18.015 water 84 nat water no yes GCGGAUUUA(2MG)CUCAG(H2U)(H2U)GGGAGAGC(M2G)CCAGA(OMC)U(OMG)AA(YG)A(PSU)(5MC)UGGAG (7MG)UC(5MC)UGUG(5MU)(PSU)CG(1MA)UCCACAGAAUUCGCACCA GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGUUCGAUCCACAGAAUUCGCACCA A polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n baker's yeast Saccharomyces sample 4932 Saccharomyces cerevisiae 2.99 58.84 2.492 1 19 A 1 A 72 -3.329 A_G1:C72_A 1 -14.202 0.026 -0.049 -0.375 -2.514 1 19 A 2 A 71 -7.062 A_C2:G71_A 2 5.358 -0.410 -0.023 -0.216 -0.226 1 19 A 3 A 70 -5.130 A_G3:C70_A 3 -14.962 -0.062 0.458 -0.535 5.506 1 28 A 4 A 69 4.738 A_G4:U69_A 4 -0.285 -1.662 0.318 -0.607 0.060 1 20 A 5 A 68 -3.722 A_A5:U68_A 5 -9.088 0.225 0.437 -0.219 -4.987 1 20 A 6 A 67 -2.119 A_U6:A67_A 6 -19.913 -0.005 0.330 -0.134 -3.873 1 20 A 7 A 66 -8.368 A_U7:A66_A 7 3.658 -0.449 0.088 -0.189 0.265 1 19 A 49 A 65 -2.745 A_5MC49:G65_A 8 -3.971 0.048 -0.007 -0.381 0.235 1 20 A 50 A 64 -7.451 A_U50:A64_A 9 7.634 -0.203 0.191 -0.284 -1.543 1 19 A 51 A 63 -5.214 A_G51:C63_A 10 -5.215 -0.308 -0.180 -0.356 -0.814 1 20 A 52 A 62 -3.100 A_U52:A62_A 11 -4.986 -0.078 0.209 -0.166 1.534 1 19 A 53 A 61 -0.916 A_G53:C61_A 12 -0.824 -0.267 0.212 0.005 2.007 4 24 A 54 A 58 -106.907 A_5MU54:1MA58_A 13 7.656 4.074 0.020 -1.555 28.228 2 A 55 A 18 -85.761 A_PSU55:G18_A 14 9.694 0.637 0.592 -5.583 2.832 1 21 A 39 A 31 -7.234 A_PSU39:A31_A 15 -2.037 -1.219 0.859 0.133 6.111 1 19 A 40 A 30 -2.625 A_5MC40:G30_A 16 -18.204 -0.213 0.028 -0.426 0.316 1 20 A 41 A 29 -4.096 A_U41:A29_A 17 2.620 -0.524 -0.064 -0.128 -2.330 1 19 A 42 A 28 0.995 A_G42:C28_A 18 -6.772 -0.035 -0.079 -0.211 -5.610 1 19 A 43 A 27 -0.697 A_G43:C27_A 19 -14.632 -0.662 -0.008 -0.021 -22.852 1 8 A 44 A 26 -13.189 A_A44:M2G26_A 20 -22.358 -1.344 0.065 1.628 -1.193 1 19 A 10 A 25 -2.890 A_2MG10:C25_A 21 -5.080 -0.023 -0.125 -0.149 -3.830 1 19 A 11 A 24 -1.551 A_C11:G24_A 22 7.523 0.120 0.395 -0.059 -2.930 1 20 A 12 A 23 -4.321 A_U12:A23_A 23 -5.508 -0.045 0.101 0.032 1.635 1 19 A 13 A 22 -2.651 A_C13:G22_A 24 -2.927 0.262 0.144 -0.016 0.925 4 24 A 14 A 8 -103.019 A_A14:U8_A 25 13.796 -3.828 1.047 -1.705 -1.739 2 22 A 15 A 48 157.026 A_G15:C48_A 26 9.428 0.063 -0.097 3.930 -27.288 1 19 A 19 A 56 -2.418 A_G19:C56_A 27 -25.860 0.127 0.166 -0.342 2.746 26.681 A A 1 2 12.096 A A 72 71 3.259 5.508 -0.245 -2.120 AA_G1C2:G71C72_AA 1 -5.210 11.442 25.600 -5.941 -0.743 2.865 34.853 A A 2 3 9.416 A A 71 70 3.101 5.609 0.515 -1.487 AA_C2G3:C70G71_AA 2 3.346 -5.618 34.254 -3.266 -0.392 1.850 31.723 A A 3 4 21.461 A A 70 69 2.686 11.478 0.763 -1.847 AA_G3G4:U69C70_AA 3 -0.376 0.703 29.621 -4.896 -1.446 2.881 41.372 A A 4 5 10.962 A A 69 68 3.193 7.702 -0.597 -1.563 AA_G4A5:U68U69_AA 4 -1.420 2.021 40.656 -2.985 0.702 2.863 30.532 A A 5 6 11.909 A A 68 67 3.313 6.228 0.222 -1.946 AA_A5U6:A67U68_AA 5 0.801 -1.531 29.894 -4.877 -0.269 2.462 34.225 A A 6 7 21.009 A A 67 66 3.232 12.110 -0.309 -1.635 AA_U6U7:A66A67_AA 6 0.934 -1.620 32.058 -4.497 0.657 3.147 36.479 A A 7 49 0.396 A A 66 65 3.176 0.248 -0.182 -1.877 AA_U75MC49:G65A66_AA 7 2.232 -3.568 36.412 -3.032 0.590 3.081 30.422 A A 49 50 4.360 A A 65 64 3.170 2.271 -0.701 -2.148 AA_5MC49U50:A64G65_AA 8 -6.082 11.676 29.738 -4.533 0.159 2.301 31.541 A A 50 51 19.539 A A 64 63 3.116 10.378 0.073 -1.911 AA_U50G51:C63A64_AA 9 5.431 -10.225 29.336 -5.175 0.734 3.312 34.218 A A 51 52 6.694 A A 63 62 3.536 3.920 -0.035 -1.600 AA_G51U52:A62C63_AA 10 -4.397 7.509 33.722 -3.372 -0.671 3.080 30.074 A A 52 53 -0.943 A A 62 61 3.005 -0.489 1.098 -1.907 AA_U52G53:C61A62_AA 11 1.346 -2.596 30.041 -3.581 -1.860 3.279 92.329 A A 53 54 -0.989 A A 61 58 3.410 -1.425 -2.404 -2.939 AA_G535MU54:1MA58C61_AA 12 7.837 -5.437 92.062 -2.010 1.819 2.963 46.405 A A 54 55 15.158 A A 58 18 3.424 11.802 2.246 -2.425 AA_5MU54PSU55:G181MA58_AA 13 5.352 -6.874 44.655 -4.073 -2.399 2.712 36.190 A A 39 40 5.611 A A 31 30 2.897 3.477 -0.888 -1.100 AA_PSU395MC40:G30A31_AA 14 2.631 -4.245 35.935 -2.191 1.747 3.312 30.567 A A 40 41 2.562 A A 30 29 3.397 1.343 -0.464 -2.586 AA_5MC40U41:A29G30_AA 15 -5.366 10.232 30.074 -5.181 -0.219 3.165 30.649 A A 41 42 12.138 A A 29 28 3.527 6.360 0.221 -1.443 AA_U41G42:C28A29_AA 16 3.192 -6.092 29.831 -4.031 0.235 2.932 32.687 A A 42 43 7.969 A A 28 27 3.176 4.472 0.461 -1.600 AA_G42G43:C27C28_AA 17 -0.155 0.277 32.388 -3.569 -0.845 2.849 35.064 A A 43 44 15.604 A A 27 26 3.444 9.254 -0.341 -1.474 AA_G43A44:M2G26C27_AA 18 5.819 -9.813 33.367 -3.818 1.428 2.057 71.416 A A 44 10 11.247 A A 26 25 3.268 12.964 -2.861 -2.860 AA_A442MG10:C25M2G26_AA 19 17.945 -15.568 68.336 -2.821 2.964 2.966 38.016 A A 10 11 6.300 A A 25 24 3.070 4.079 -0.800 -1.695 AA_2MG10C11:G24C25_AA 20 -6.310 9.747 37.293 -3.086 0.480 2.991 32.079 A A 11 12 9.164 A A 24 23 3.336 5.015 -0.168 -1.422 AA_C11U12:A23G24_AA 21 6.073 -11.097 31.122 -3.460 1.376 3.126 27.019 A A 12 13 6.166 A A 23 22 3.141 2.864 1.618 -2.021 AA_U12C13:G22A23_AA 22 4.258 -9.167 26.536 -5.030 -2.416 2.835 60.961 A A 13 14 -9.848 A A 22 8 3.063 -9.937 -2.280 -0.379 AA_C13A14:U8G22_AA 23 6.891 -6.829 59.863 0.060 2.548 4.026 -67.287 A A 14 15 -14.242 A A 8 48 3.245 15.652 2.349 -3.283 AA_A14G15:C48U8_AA 24 -5.911 -5.379 -65.412 2.276 1.861 atom_site atom_sites chem_comp_atom chem_comp_bond database_2 database_PDB_matrix pdbx_database_remark pdbx_struct_conn_angle pdbx_validate_close_contact pdbx_validate_rmsd_angle pdbx_validate_symm_contact struct_conn struct_site repository Initial release Coordinates and associated ncs operations (if present) transformed into standard crystal frame repository Remediation Version format compliance Advisory Version format compliance Advisory Atomic model Data collection Database references Derived calculations Other 1 0 1979-01-16 1 1 2008-05-22 1 2 2011-07-13 2 0 2023-09-27 _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_sites.fract_transf_matrix[1][1] _atom_sites.fract_transf_matrix[1][2] _atom_sites.fract_transf_matrix[1][3] _atom_sites.fract_transf_matrix[2][1] _atom_sites.fract_transf_matrix[2][2] _atom_sites.fract_transf_matrix[2][3] _atom_sites.fract_transf_matrix[3][1] _atom_sites.fract_transf_matrix[3][2] _atom_sites.fract_transf_matrix[3][3] _atom_sites.fract_transf_vector[1] _atom_sites.fract_transf_vector[2] _atom_sites.fract_transf_vector[3] _database_2.pdbx_DOI _database_2.pdbx_database_accession _database_PDB_matrix.origx[1][1] _database_PDB_matrix.origx[1][2] _database_PDB_matrix.origx[1][3] _database_PDB_matrix.origx[2][1] _database_PDB_matrix.origx[2][2] _database_PDB_matrix.origx[2][3] _database_PDB_matrix.origx[3][1] _database_PDB_matrix.origx[3][2] _database_PDB_matrix.origx[3][3] _database_PDB_matrix.origx_vector[1] _database_PDB_matrix.origx_vector[2] _database_PDB_matrix.origx_vector[3] _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _pdbx_validate_close_contact.dist _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1979-01-16 SPRSDE BNL Y BNL 1978-11-16 REL MG MAGNESIUM ION HOH water MO5 77 2 MG MG 77 A MO4 78 2 MG MG 78 A MO6 79 2 MG MG 79 A MO5 80 2 MG MG 80 A HOH 81 3 HOH HOH 81 A HOH 82 3 HOH HOH 82 A HOH 83 3 HOH HOH 83 A HOH 84 3 HOH HOH 84 A HOH 85 3 HOH HOH 85 A HOH 86 3 HOH HOH 86 A HOH 87 3 HOH HOH 87 A HOH 88 3 HOH HOH 88 A HOH 89 3 HOH HOH 89 A HOH 90 3 HOH HOH 90 A HOH 91 3 HOH HOH 91 A HOH 92 3 HOH HOH 92 A HOH 93 3 HOH HOH 93 A HOH 94 3 HOH HOH 94 A HOH 95 3 HOH HOH 95 A HOH 96 3 HOH HOH 96 A HOH 97 3 HOH HOH 97 A HOH 98 3 HOH HOH 98 A HOH 99 3 HOH HOH 99 A HOH 100 3 HOH HOH 100 A HOH 101 3 HOH HOH 101 A HOH 102 3 HOH HOH 102 A HOH 103 3 HOH HOH 103 A HOH 104 3 HOH HOH 104 A HOH 105 3 HOH HOH 105 A HOH 106 3 HOH HOH 106 A HOH 107 3 HOH HOH 107 A HOH 108 3 HOH HOH 108 A HOH 109 3 HOH HOH 109 A HOH 110 3 HOH HOH 110 A HOH 111 3 HOH HOH 111 A HOH 112 3 HOH HOH 112 A HOH 113 3 HOH HOH 113 A HOH 114 3 HOH HOH 114 A HOH 115 3 HOH HOH 115 A HOH 116 3 HOH HOH 116 A HOH 117 3 HOH HOH 117 A HOH 118 3 HOH HOH 118 A HOH 119 3 HOH HOH 119 A HOH 120 3 HOH HOH 120 A HOH 121 3 HOH HOH 121 A HOH 122 3 HOH HOH 122 A HOH 123 3 HOH HOH 123 A HOH 124 3 HOH HOH 124 A HOH 125 3 HOH HOH 125 A HOH 126 3 HOH HOH 126 A HOH 127 3 HOH HOH 127 A HOH 128 3 HOH HOH 128 A HOH 129 3 HOH HOH 129 A HOH 130 3 HOH HOH 130 A HOH 131 3 HOH HOH 131 A HOH 132 3 HOH HOH 132 A HOH 133 3 HOH HOH 133 A HOH 134 3 HOH HOH 134 A HOH 135 3 HOH HOH 135 A HOH 136 3 HOH HOH 136 A HOH 137 3 HOH HOH 137 A HOH 138 3 HOH HOH 138 A HOH 139 3 HOH HOH 139 A HOH 140 3 HOH HOH 140 A HOH 141 3 HOH HOH 141 A HOH 142 3 HOH HOH 142 A HOH 143 3 HOH HOH 143 A HOH 144 3 HOH HOH 144 A MO5 77 3 HOH HOH 145 A MO5 77 3 HOH HOH 146 A MO5 77 3 HOH HOH 147 A MO5 77 3 HOH HOH 148 A MO5 77 3 HOH HOH 149 A MO4 78 3 HOH HOH 150 A MO4 78 3 HOH HOH 151 A MO4 78 3 HOH HOH 152 A MO4 78 3 HOH HOH 153 A MO6 79 3 HOH HOH 154 A MO6 79 3 HOH HOH 155 A MO6 79 3 HOH HOH 156 A MO6 79 3 HOH HOH 157 A MO6 79 3 HOH HOH 158 A MO6 79 3 HOH HOH 159 A MO5 80 3 HOH HOH 160 A MO5 80 3 HOH HOH 161 A MO5 80 3 HOH HOH 162 A MO5 80 3 HOH HOH 163 A MO5 80 3 HOH HOH 164 A G 1 n 1 G 1 A C 2 n 2 C 2 A G 3 n 3 G 3 A G 4 n 4 G 4 A A 5 n 5 A 5 A U 6 n 6 U 6 A U 7 n 7 U 7 A U 8 n 8 U 8 A A 9 n 9 A 9 A 2MG 10 n 10 2MG 10 A C 11 n 11 C 11 A U 12 n 12 U 12 A C 13 n 13 C 13 A A 14 n 14 A 14 A G 15 n 15 G 15 A H2U 16 n 16 H2U 16 A H2U 17 n 17 H2U 17 A G 18 n 18 G 18 A G 19 n 19 G 19 A G 20 n 20 G 20 A A 21 n 21 A 21 A G 22 n 22 G 22 A A 23 n 23 A 23 A G 24 n 24 G 24 A C 25 n 25 C 25 A M2G 26 n 26 M2G 26 A C 27 n 27 C 27 A C 28 n 28 C 28 A A 29 n 29 A 29 A G 30 n 30 G 30 A A 31 n 31 A 31 A OMC 32 n 32 OMC 32 A U 33 n 33 U 33 A OMG 34 n 34 OMG 34 A A 35 n 35 A 35 A A 36 n 36 A 36 A YG 37 n 37 YG 37 A A 38 n 38 A 38 A PSU 39 n 39 PSU 39 A 5MC 40 n 40 5MC 40 A U 41 n 41 U 41 A G 42 n 42 G 42 A G 43 n 43 G 43 A A 44 n 44 A 44 A G 45 n 45 G 45 A 7MG 46 n 46 7MG 46 A U 47 n 47 U 47 A C 48 n 48 C 48 A 5MC 49 n 49 5MC 49 A U 50 n 50 U 50 A G 51 n 51 G 51 A U 52 n 52 U 52 A G 53 n 53 G 53 A 5MU 54 n 54 5MU 54 A PSU 55 n 55 PSU 55 A C 56 n 56 C 56 A G 57 n 57 G 57 A 1MA 58 n 58 1MA 58 A U 59 n 59 U 59 A C 60 n 60 C 60 A C 61 n 61 C 61 A A 62 n 62 A 62 A C 63 n 63 C 63 A A 64 n 64 A 64 A G 65 n 65 G 65 A A 66 n 66 A 66 A A 67 n 67 A 67 A U 68 n 68 U 68 A U 69 n 69 U 69 A C 70 n 70 C 70 A G 71 n 71 G 71 A C 72 n 72 C 72 A A 73 n 73 A 73 A C 74 n 74 C 74 A C 75 n 75 C 75 A A 76 n 76 A 76 A author_defined_assembly 1 monomeric A G 19 A OP1 G 19 1_555 A MG 77 B MG MG 1_555 A HOH 145 F O HOH 1_555 89.0 A G 19 A OP1 G 19 1_555 A MG 77 B MG MG 1_555 A HOH 146 F O HOH 1_555 91.1 A HOH 145 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 146 F O HOH 1_555 180.0 A G 19 A OP1 G 19 1_555 A MG 77 B MG MG 1_555 A HOH 147 F O HOH 1_555 85.9 A HOH 145 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 147 F O HOH 1_555 90.0 A HOH 146 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 147 F O HOH 1_555 90.0 A G 19 A OP1 G 19 1_555 A MG 77 B MG MG 1_555 A HOH 148 F O HOH 1_555 94.1 A HOH 145 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 148 F O HOH 1_555 90.0 A HOH 146 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 148 F O HOH 1_555 90.0 A HOH 147 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 148 F O HOH 1_555 180.0 A G 19 A OP1 G 19 1_555 A MG 77 B MG MG 1_555 A HOH 149 F O HOH 1_555 175.8 A HOH 145 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 149 F O HOH 1_555 90.0 A HOH 146 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 149 F O HOH 1_555 90.0 A HOH 147 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 149 F O HOH 1_555 90.0 A HOH 148 F O HOH 1_555 A MG 77 B MG MG 1_555 A HOH 149 F O HOH 1_555 90.0 A G 20 A OP1 G 20 1_555 A MG 78 C MG MG 1_555 A A 21 A OP2 A 21 1_555 87.4 A G 20 A OP1 G 20 1_555 A MG 78 C MG MG 1_555 A HOH 150 F O HOH 1_555 174.5 A A 21 A OP2 A 21 1_555 A MG 78 C MG MG 1_555 A HOH 150 F O HOH 1_555 97.9 A G 20 A OP1 G 20 1_555 A MG 78 C MG MG 1_555 A HOH 151 F O HOH 1_555 88.5 A A 21 A OP2 A 21 1_555 A MG 78 C MG MG 1_555 A HOH 151 F O HOH 1_555 94.4 A HOH 150 F O HOH 1_555 A MG 78 C MG MG 1_555 A HOH 151 F O HOH 1_555 90.0 A G 20 A OP1 G 20 1_555 A MG 78 C MG MG 1_555 A HOH 152 F O HOH 1_555 91.5 A A 21 A OP2 A 21 1_555 A MG 78 C MG MG 1_555 A HOH 152 F O HOH 1_555 85.6 A HOH 150 F O HOH 1_555 A MG 78 C MG MG 1_555 A HOH 152 F O HOH 1_555 90.0 A HOH 151 F O HOH 1_555 A MG 78 C MG MG 1_555 A HOH 152 F O HOH 1_555 179.9 A G 20 A OP1 G 20 1_555 A MG 78 C MG MG 1_555 A HOH 153 F O HOH 1_555 84.8 A A 21 A OP2 A 21 1_555 A MG 78 C MG MG 1_555 A HOH 153 F O HOH 1_555 170.9 A HOH 150 F O HOH 1_555 A MG 78 C MG MG 1_555 A HOH 153 F O HOH 1_555 90.0 A HOH 151 F O HOH 1_555 A MG 78 C MG MG 1_555 A HOH 153 F O HOH 1_555 90.0 A HOH 152 F O HOH 1_555 A MG 78 C MG MG 1_555 A HOH 153 F O HOH 1_555 90.0 A YG 37 A OP2 YG 37 1_555 A MG 80 E MG MG 1_555 A HOH 160 F O HOH 1_555 112.2 A YG 37 A OP2 YG 37 1_555 A MG 80 E MG MG 1_555 A HOH 161 F O HOH 1_555 67.8 A HOH 160 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 161 F O HOH 1_555 180.0 A YG 37 A OP2 YG 37 1_555 A MG 80 E MG MG 1_555 A HOH 162 F O HOH 1_555 69.7 A HOH 160 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 162 F O HOH 1_555 90.0 A HOH 161 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 162 F O HOH 1_555 90.0 A YG 37 A OP2 YG 37 1_555 A MG 80 E MG MG 1_555 A HOH 163 F O HOH 1_555 110.3 A HOH 160 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 163 F O HOH 1_555 90.0 A HOH 161 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 163 F O HOH 1_555 90.0 A HOH 162 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 163 F O HOH 1_555 180.0 A YG 37 A OP2 YG 37 1_555 A MG 80 E MG MG 1_555 A HOH 164 F O HOH 1_555 149.2 A HOH 160 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 164 F O HOH 1_555 90.0 A HOH 161 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 164 F O HOH 1_555 90.0 A HOH 162 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 164 F O HOH 1_555 90.0 A HOH 163 F O HOH 1_555 A MG 80 E MG MG 1_555 A HOH 164 F O HOH 1_555 90.0 A HOH 154 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 155 F O HOH 1_555 180.0 A HOH 154 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 156 F O HOH 1_555 90.0 A HOH 155 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 156 F O HOH 1_555 90.0 A HOH 154 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 157 F O HOH 1_555 90.0 A HOH 155 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 157 F O HOH 1_555 90.0 A HOH 156 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 157 F O HOH 1_555 180.0 A HOH 154 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 158 F O HOH 1_555 90.0 A HOH 155 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 158 F O HOH 1_555 90.0 A HOH 156 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 158 F O HOH 1_555 90.0 A HOH 157 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 158 F O HOH 1_555 90.0 A HOH 154 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 159 F O HOH 1_555 90.0 A HOH 155 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 159 F O HOH 1_555 90.0 A HOH 156 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 159 F O HOH 1_555 90.0 A HOH 157 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 159 F O HOH 1_555 90.0 A HOH 158 F O HOH 1_555 A MG 79 D MG MG 1_555 A HOH 159 F O HOH 1_555 180.0 A 2MG 10 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE A 2MG 10 G A H2U 16 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE A H2U 16 U A H2U 17 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE A H2U 17 U A M2G 26 N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE A M2G 26 G A OMC 32 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE A OMC 32 C A OMG 34 O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE A OMG 34 G A YG 37 WYBUTOSINE A YG 37 G A PSU 39 PSEUDOURIDINE-5'-MONOPHOSPHATE A PSU 39 U A 5MC 40 5-METHYLCYTIDINE-5'-MONOPHOSPHATE A 5MC 40 C A 7MG 46 A 7MG 46 G A 5MC 49 5-METHYLCYTIDINE-5'-MONOPHOSPHATE A 5MC 49 C A 5MU 54 5-METHYLURIDINE 5'-MONOPHOSPHATE A 5MU 54 U A PSU 55 PSEUDOURIDINE-5'-MONOPHOSPHATE A PSU 55 U A 1MA 58 A 1MA 58 A 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A C15 YG 37 WRONG HAND 1 A A OP2 O C HOH 13 129 1.53 1 A A O O HOH HOH 133 159 1.56 1 A A OP2 O A HOH 73 111 1.71 1 A A O3' O U HOH 12 129 1.83 1 A A OP2 O U HOH 12 157 1.86 1 A A C3' O U HOH 12 129 1.87 1 A A P O C HOH 13 129 1.90 1 A A OP2 O G HOH 4 140 1.97 1 A A O3' O G HOH 45 102 1.98 1 A A OP2 O U HOH 47 116 1.99 1 A A O5' O C HOH 25 92 2.00 1 A A O2 O C HOH 2 105 2.02 1 A A C4' O 7MG HOH 46 102 2.04 1 A A P O 7MG HOH 46 102 2.04 1 A A O6 O G HOH 45 112 2.05 1 A A OP1 O 7MG HOH 46 102 2.06 1 A A O3' O G HOH 45 128 2.08 1 A A OP2 O C HOH 11 133 2.09 1 A A O5' O 7MG HOH 46 102 2.13 1 A A OP2 O C HOH 25 92 2.14 1 A A OP2 O H2U HOH 16 139 2.14 1 8.91 1.20 119.70 128.61 A A A C3' O3' P G G G 18 18 19 Y 1 -7.44 1.20 119.70 112.26 A A A C3' O3' P A A G 29 29 30 Y 1 -8.40 1.20 119.70 111.30 A A A C3' O3' P A A PSU 38 38 39 Y 1 -5.78 0.70 109.70 103.92 A A A C1' O4' C4' G G G 57 57 57 N 1 -7.20 1.20 119.70 112.50 A A A C3' O3' P A A A 66 66 67 Y 1 A A O6 O3' OMG A 34 76 1.46 1_555 3_465 1 A A C5' O YG HOH 37 131 1.66 1_555 3_465 1 A A C2' O A HOH 76 125 1.76 1_555 3_465 1 A A C5 O2' H2U A 17 23 1.77 1_555 3_555 1 A A N7 O G HOH 19 101 1.80 1_555 3_555 1 A A O5' O YG HOH 37 131 1.82 1_555 3_465 1 A A O2' O A HOH 76 125 2.06 1_555 3_465 1 A A C8 O G HOH 19 101 2.11 1_555 3_555 1 A A C6 C5' H2U G 17 24 2.11 1_555 3_555 1 A A C5 C5' H2U G 17 24 2.15 1_555 3_555 1 A A C4 O2' H2U A 17 23 2.17 1_555 3_555 0.1980000 2.700 8426 1 2.700 84 1740 4 1652 0 refinement CORELS CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENT 1 N N 2 N N 2 N N 2 N N 2 N N 3 N N covale 1.587 both A A 9 A O3' A 9 1_555 A 2MG 10 A P 2MG 10 1_555 covale 1.590 both A 2MG 10 A O3' 2MG 10 1_555 A C 11 A P C 11 1_555 covale 1.611 both A G 15 A O3' G 15 1_555 A H2U 16 A P H2U 16 1_555 covale 1.603 both A H2U 16 A O3' H2U 16 1_555 A H2U 17 A P H2U 17 1_555 covale 1.590 both A H2U 17 A O3' H2U 17 1_555 A G 18 A P G 18 1_555 covale 1.610 both A C 25 A O3' C 25 1_555 A M2G 26 A P M2G 26 1_555 covale 1.592 both A M2G 26 A O3' M2G 26 1_555 A C 27 A P C 27 1_555 covale 1.599 both A A 31 A O3' A 31 1_555 A OMC 32 A P OMC 32 1_555 covale 1.602 both A OMC 32 A O3' OMC 32 1_555 A U 33 A P U 33 1_555 covale 1.596 both A U 33 A O3' U 33 1_555 A OMG 34 A P OMG 34 1_555 covale 1.598 both A OMG 34 A O3' OMG 34 1_555 A A 35 A P A 35 1_555 covale 1.590 both A A 36 A O3' A 36 1_555 A YG 37 A P YG 37 1_555 covale 1.593 both A YG 37 A O3' YG 37 1_555 A A 38 A P A 38 1_555 covale 1.618 both A A 38 A O3' A 38 1_555 A PSU 39 A P PSU 39 1_555 covale 1.591 both A PSU 39 A O3' PSU 39 1_555 A 5MC 40 A P 5MC 40 1_555 covale 1.602 both A 5MC 40 A O3' 5MC 40 1_555 A U 41 A P U 41 1_555 covale 1.592 both A G 45 A O3' G 45 1_555 A 7MG 46 A P 7MG 46 1_555 covale 1.598 both A 7MG 46 A O3' 7MG 46 1_555 A U 47 A P U 47 1_555 covale 1.589 both A C 48 A O3' C 48 1_555 A 5MC 49 A P 5MC 49 1_555 covale 1.595 both A 5MC 49 A O3' 5MC 49 1_555 A U 50 A P U 50 1_555 covale 1.593 both A G 53 A O3' G 53 1_555 A 5MU 54 A P 5MU 54 1_555 covale 1.599 both A 5MU 54 A O3' 5MU 54 1_555 A PSU 55 A P PSU 55 1_555 covale 1.590 both A PSU 55 A O3' PSU 55 1_555 A C 56 A P C 56 1_555 covale 1.594 both A G 57 A O3' G 57 1_555 A 1MA 58 A P 1MA 58 1_555 covale 1.587 both A 1MA 58 A O3' 1MA 58 1_555 A U 59 A P U 59 1_555 metalc 1.907 A G 19 A OP1 G 19 1_555 A MG 77 B MG MG 1_555 metalc 2.334 A G 20 A OP1 G 20 1_555 A MG 78 C MG MG 1_555 metalc 1.758 A A 21 A OP2 A 21 1_555 A MG 78 C MG MG 1_555 metalc 2.261 A YG 37 A OP2 YG 37 1_555 A MG 80 E MG MG 1_555 metalc 2.000 A MG 77 B MG MG 1_555 A HOH 145 F O HOH 1_555 metalc 2.000 A MG 77 B MG MG 1_555 A HOH 146 F O HOH 1_555 metalc 1.999 A MG 77 B MG MG 1_555 A HOH 147 F O HOH 1_555 metalc 1.999 A MG 77 B MG MG 1_555 A HOH 148 F O HOH 1_555 metalc 2.000 A MG 77 B MG MG 1_555 A HOH 149 F O HOH 1_555 metalc 2.000 A MG 78 C MG MG 1_555 A HOH 150 F O HOH 1_555 metalc 2.001 A MG 78 C MG MG 1_555 A HOH 151 F O HOH 1_555 metalc 2.000 A MG 78 C MG MG 1_555 A HOH 152 F O HOH 1_555 metalc 2.000 A MG 78 C MG MG 1_555 A HOH 153 F O HOH 1_555 metalc 2.000 A MG 79 D MG MG 1_555 A HOH 154 F O HOH 1_555 metalc 2.000 A MG 79 D MG MG 1_555 A HOH 155 F O HOH 1_555 metalc 2.000 A MG 79 D MG MG 1_555 A HOH 156 F O HOH 1_555 metalc 2.000 A MG 79 D MG MG 1_555 A HOH 157 F O HOH 1_555 metalc 2.000 A MG 79 D MG MG 1_555 A HOH 158 F O HOH 1_555 metalc 2.000 A MG 79 D MG MG 1_555 A HOH 159 F O HOH 1_555 metalc 2.000 A MG 80 E MG MG 1_555 A HOH 160 F O HOH 1_555 metalc 1.998 A MG 80 E MG MG 1_555 A HOH 161 F O HOH 1_555 metalc 2.000 A MG 80 E MG MG 1_555 A HOH 162 F O HOH 1_555 metalc 2.000 A MG 80 E MG MG 1_555 A HOH 163 F O HOH 1_555 metalc 2.000 A MG 80 E MG MG 1_555 A HOH 164 F O HOH 1_555 hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 A C 72 A N3 C 72 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 A C 72 A O2 C 72 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 A C 72 A N4 C 72 1_555 hydrog WATSON-CRICK A C 2 A N3 C 2 1_555 A G 71 A N1 G 71 1_555 hydrog WATSON-CRICK A C 2 A N4 C 2 1_555 A G 71 A O6 G 71 1_555 hydrog WATSON-CRICK A C 2 A O2 C 2 1_555 A G 71 A N2 G 71 1_555 hydrog WATSON-CRICK A G 3 A N1 G 3 1_555 A C 70 A N3 C 70 1_555 hydrog WATSON-CRICK A G 3 A N2 G 3 1_555 A C 70 A O2 C 70 1_555 hydrog WATSON-CRICK A G 3 A O6 G 3 1_555 A C 70 A N4 C 70 1_555 hydrog TYPE_28_PAIR A G 4 A N1 G 4 1_555 A U 69 A O2 U 69 1_555 hydrog TYPE_28_PAIR A G 4 A O6 G 4 1_555 A U 69 A N3 U 69 1_555 hydrog WATSON-CRICK A A 5 A N1 A 5 1_555 A U 68 A N3 U 68 1_555 hydrog WATSON-CRICK A A 5 A N6 A 5 1_555 A U 68 A O4 U 68 1_555 hydrog WATSON-CRICK A U 6 A N3 U 6 1_555 A A 67 A N1 A 67 1_555 hydrog WATSON-CRICK A U 6 A O4 U 6 1_555 A A 67 A N6 A 67 1_555 hydrog WATSON-CRICK A U 7 A N3 U 7 1_555 A A 66 A N1 A 66 1_555 hydrog WATSON-CRICK A U 7 A O4 U 7 1_555 A A 66 A N6 A 66 1_555 hydrog REVERSED HOOGSTEEN A U 8 A N3 U 8 1_555 A A 14 A N7 A 14 1_555 hydrog REVERSED HOOGSTEEN A U 8 A O2 U 8 1_555 A A 14 A N6 A 14 1_555 hydrog TYPE_2_PAIR A A 9 A N6 A 9 1_555 A A 23 A N7 A 23 1_555 hydrog TYPE_2_PAIR A A 9 A N7 A 9 1_555 A A 23 A N6 A 23 1_555 hydrog WATSON-CRICK A 2MG 10 A N1 2MG 10 1_555 A C 25 A N3 C 25 1_555 hydrog WATSON-CRICK A 2MG 10 A N2 2MG 10 1_555 A C 25 A O2 C 25 1_555 hydrog WATSON-CRICK A 2MG 10 A O6 2MG 10 1_555 A C 25 A N4 C 25 1_555 hydrog 2MG-G MISPAIR A 2MG 10 A O6 2MG 10 1_555 A G 45 A N2 G 45 1_555 hydrog WATSON-CRICK A C 11 A N3 C 11 1_555 A G 24 A N1 G 24 1_555 hydrog WATSON-CRICK A C 11 A N4 C 11 1_555 A G 24 A O6 G 24 1_555 hydrog WATSON-CRICK A C 11 A O2 C 11 1_555 A G 24 A N2 G 24 1_555 hydrog WATSON-CRICK A U 12 A N3 U 12 1_555 A A 23 A N1 A 23 1_555 hydrog WATSON-CRICK A U 12 A O4 U 12 1_555 A A 23 A N6 A 23 1_555 hydrog WATSON-CRICK A C 13 A N3 C 13 1_555 A G 22 A N1 G 22 1_555 hydrog WATSON-CRICK A C 13 A N4 C 13 1_555 A G 22 A O6 G 22 1_555 hydrog WATSON-CRICK A C 13 A O2 C 13 1_555 A G 22 A N2 G 22 1_555 hydrog REVERSED WATSON-CRICK A G 15 A N1 G 15 1_555 A C 48 A O2 C 48 1_555 hydrog REVERSED WATSON-CRICK A G 15 A N2 G 15 1_555 A C 48 A N3 C 48 1_555 hydrog G-PSU MISPAIR A G 18 A N1 G 18 1_555 A PSU 55 A O4 PSU 55 1_555 hydrog WATSON-CRICK A G 19 A N1 G 19 1_555 A C 56 A N3 C 56 1_555 hydrog WATSON-CRICK A G 19 A N2 G 19 1_555 A C 56 A O2 C 56 1_555 hydrog WATSON-CRICK A G 19 A O6 G 19 1_555 A C 56 A N4 C 56 1_555 hydrog TYPE_7_PAIR A G 22 A N7 G 22 1_555 A 7MG 46 A N1 7MG 46 1_555 hydrog TYPE_7_PAIR A G 22 A O6 G 22 1_555 A 7MG 46 A N2 7MG 46 1_555 hydrog TYPE_8_PAIR A M2G 26 A N1 M2G 26 1_555 A A 44 A N1 A 44 1_555 hydrog TYPE_8_PAIR A M2G 26 A O6 M2G 26 1_555 A A 44 A N6 A 44 1_555 hydrog WATSON-CRICK A C 27 A N3 C 27 1_555 A G 43 A N1 G 43 1_555 hydrog WATSON-CRICK A C 27 A N4 C 27 1_555 A G 43 A O6 G 43 1_555 hydrog WATSON-CRICK A C 27 A O2 C 27 1_555 A G 43 A N2 G 43 1_555 hydrog WATSON-CRICK A C 28 A N3 C 28 1_555 A G 42 A N1 G 42 1_555 hydrog WATSON-CRICK A C 28 A N4 C 28 1_555 A G 42 A O6 G 42 1_555 hydrog WATSON-CRICK A C 28 A O2 C 28 1_555 A G 42 A N2 G 42 1_555 hydrog WATSON-CRICK A A 29 A N1 A 29 1_555 A U 41 A N3 U 41 1_555 hydrog WATSON-CRICK A A 29 A N6 A 29 1_555 A U 41 A O4 U 41 1_555 hydrog WATSON-CRICK A G 30 A N1 G 30 1_555 A 5MC 40 A N3 5MC 40 1_555 hydrog WATSON-CRICK A G 30 A N2 G 30 1_555 A 5MC 40 A O2 5MC 40 1_555 hydrog WATSON-CRICK A G 30 A O6 G 30 1_555 A 5MC 40 A N4 5MC 40 1_555 hydrog REVERSED WATSON-CRICK A A 31 A N1 A 31 1_555 A PSU 39 A N3 PSU 39 1_555 hydrog REVERSED WATSON-CRICK A A 31 A N6 A 31 1_555 A PSU 39 A O2 PSU 39 1_555 hydrog WATSON-CRICK A 5MC 49 A N3 5MC 49 1_555 A G 65 A N1 G 65 1_555 hydrog WATSON-CRICK A 5MC 49 A N4 5MC 49 1_555 A G 65 A O6 G 65 1_555 hydrog WATSON-CRICK A 5MC 49 A O2 5MC 49 1_555 A G 65 A N2 G 65 1_555 hydrog WATSON-CRICK A U 50 A N3 U 50 1_555 A A 64 A N1 A 64 1_555 hydrog WATSON-CRICK A U 50 A O4 U 50 1_555 A A 64 A N6 A 64 1_555 hydrog WATSON-CRICK A G 51 A N1 G 51 1_555 A C 63 A N3 C 63 1_555 hydrog WATSON-CRICK A G 51 A N2 G 51 1_555 A C 63 A O2 C 63 1_555 hydrog WATSON-CRICK A G 51 A O6 G 51 1_555 A C 63 A N4 C 63 1_555 hydrog WATSON-CRICK A U 52 A N3 U 52 1_555 A A 62 A N1 A 62 1_555 hydrog WATSON-CRICK A U 52 A O4 U 52 1_555 A A 62 A N6 A 62 1_555 hydrog WATSON-CRICK A G 53 A N1 G 53 1_555 A C 61 A N3 C 61 1_555 hydrog WATSON-CRICK A G 53 A N2 G 53 1_555 A C 61 A O2 C 61 1_555 hydrog WATSON-CRICK A G 53 A O6 G 53 1_555 A C 61 A N4 C 61 1_555 hydrog REVERSED HOOGSTEEN A 5MU 54 A N3 5MU 54 1_555 A 1MA 58 A N7 1MA 58 1_555 hydrog REVERSED HOOGSTEEN A 5MU 54 A O2 5MU 54 1_555 A 1MA 58 A N6 1MA 58 1_555 T-RNA T-RNA, SINGLE STRAND, LOOPS 6TNA PDB 1 6TNA 1 76 6TNA 1 76 6TNA A 1 1 76 BINDING SITE FOR RESIDUE MG A 77 A MG 77 Software 6 BINDING SITE FOR RESIDUE MG A 78 A MG 78 Software 7 BINDING SITE FOR RESIDUE MG A 79 A MG 79 Software 9 BINDING SITE FOR RESIDUE MG A 80 A MG 80 Software 6 A G 19 A G 19 6 1_555 A HOH 145 F HOH 6 1_555 A HOH 146 F HOH 6 1_555 A HOH 147 F HOH 6 1_555 A HOH 148 F HOH 6 1_555 A HOH 149 F HOH 6 1_555 A H2U 16 A H2U 16 7 3_555 A G 20 A G 20 7 1_555 A A 21 A A 21 7 1_555 A HOH 150 F HOH 7 1_555 A HOH 151 F HOH 7 1_555 A HOH 152 F HOH 7 1_555 A HOH 153 F HOH 7 1_555 A U 8 A U 8 9 1_555 A U 12 A U 12 9 1_555 A HOH 133 F HOH 9 1_555 A HOH 154 F HOH 9 1_555 A HOH 155 F HOH 9 1_555 A HOH 156 F HOH 9 1_555 A HOH 157 F HOH 9 1_555 A HOH 158 F HOH 9 1_555 A HOH 159 F HOH 9 1_555 A YG 37 A YG 37 6 1_555 A HOH 160 F HOH 6 1_555 A HOH 161 F HOH 6 1_555 A HOH 162 F HOH 6 1_555 A HOH 163 F HOH 6 1_555 A HOH 164 F HOH 6 1_555 18 P 21 2 21