0.030303
0.000000
0.000000
0.000000
0.017857
0.000000
0.000000
0.000000
0.006211
0.000000
0.000000
0.000000
Sussman, J.L.
Holbrook, S.R.
Warrant, R.W.
Church, G.M.
Kim, S.-H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
33.000
56.000
161.000
C11 H16 N5 O7 P
361.248
n
6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
RNA linking
C11 H16 N5 O8 P
377.247
n
2N-METHYLGUANOSINE-5'-MONOPHOSPHATE
RNA linking
C10 H16 N3 O8 P
337.223
n
5-METHYLCYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H15 N2 O9 P
338.208
n
5-METHYLURIDINE 5'-MONOPHOSPHATE
RNA linking
C11 H18 N5 O8 P
379.263
n
7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H15 N2 O9 P
326.197
n
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
RNA linking
H2 O
18.015
WATER
non-polymer
C12 H18 N5 O8 P
391.274
n
N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
RNA linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C10 H16 N3 O8 P
337.223
n
O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
RNA linking
C11 H16 N5 O8 P
377.247
n
O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H13 N2 O9 P
324.181
n
PSEUDOURIDINE-5'-MONOPHOSPHATE
RNA linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C21 H29 N6 O12 P
588.462
n
WYBUTOSINE
Y-BASE; 1H-IMIDAZO(1,2-ALPHA)PURINE-7-BUTANOIC ACID,4,9-DIHYDRO-ALPHA-((METHOXYCARBONYL)AMINO)-4,6-DIMETHYL-9-OXO-METHYL ESTER
RNA linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
N
18
N
C
N
19
N
N
N
20
N
N
N
21
N
C
N
22
N
C
N
23
N
N
Y
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
P
N
42
N
O
N
43
N
O
N
44
N
O
N
45
N
O
N
46
N
C
N
47
R
C
N
48
N
O
N
49
S
C
N
50
N
O
N
51
R
C
N
52
N
O
N
53
R
C
Y
54
N
N
Y
55
N
C
Y
56
N
N
Y
57
N
C
N
58
N
C
N
59
N
O
N
60
N
N
N
61
N
C
N
62
N
N
N
63
N
C
N
64
N
N
Y
65
N
C
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
P
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
O
N
87
N
C
N
88
R
C
N
89
N
O
N
90
S
C
N
91
N
O
N
92
R
C
N
93
N
O
N
94
R
C
N
95
N
N
N
96
N
C
N
97
N
O
N
98
N
N
N
99
N
C
N
100
N
N
N
101
N
C
N
102
N
C
N
103
N
C
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
N
C
N
122
N
N
N
123
N
C
N
124
N
C
N
125
N
C
N
126
N
C
N
127
N
O
N
128
N
O
N
129
R
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
R
C
N
134
N
O
N
135
N
O
N
136
N
C
N
137
N
O
N
138
N
P
N
139
N
O
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
P
N
158
N
O
N
159
N
O
N
160
N
O
N
161
N
O
N
162
N
C
N
163
R
C
N
164
N
O
N
165
S
C
N
166
N
O
N
167
R
C
N
168
N
O
N
169
R
C
N
170
N
N
N
171
N
C
N
172
N
N
N
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
N
180
N
C
N
181
N
C
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
P
N
202
N
O
N
203
N
O
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
O
N
208
S
C
N
209
N
O
N
210
R
C
N
211
N
O
N
212
R
C
Y
213
N
N
Y
214
N
C
Y
215
N
N
Y
216
N
C
Y
217
N
C
N
218
N
N
Y
219
N
N
Y
220
N
C
Y
221
N
N
Y
222
N
C
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
O
N
238
N
P
N
239
N
O
N
240
N
O
N
241
N
O
N
242
N
C
N
243
R
C
N
244
N
O
N
245
S
C
N
246
N
O
N
247
R
C
N
248
N
O
N
249
R
C
N
250
N
N
N
251
N
C
N
252
N
O
N
253
N
N
N
254
N
C
N
255
N
N
N
256
N
C
N
257
N
C
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
O
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
O
N
280
S
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
R
C
Y
285
N
N
Y
286
N
C
Y
287
N
N
Y
288
N
C
N
289
N
C
N
290
N
O
N
291
N
N
N
292
N
C
N
293
N
N
N
294
N
N
Y
295
N
C
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
P
N
311
N
O
N
312
N
O
N
313
N
O
N
314
N
O
N
315
N
C
N
316
R
C
N
317
N
O
N
318
S
C
N
319
N
O
N
320
R
C
N
321
R
C
N
322
N
O
N
323
N
N
N
324
N
C
N
325
N
O
N
326
N
N
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
C
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
P
N
350
N
O
N
351
N
O
N
352
N
O
N
353
N
O
N
354
N
C
N
355
R
C
N
356
N
O
N
357
S
C
N
358
N
O
N
359
R
C
N
360
N
O
N
361
R
C
Y
362
N
N
Y
363
N
C
Y
364
N
N
Y
365
N
C
N
366
N
C
N
367
N
O
N
368
N
N
N
369
N
C
N
370
N
N
N
371
N
N
Y
372
N
C
N
373
N
C
N
374
N
C
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
MG
N
394
N
N
N
395
N
C
N
396
N
N
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
O
N
401
N
N
N
402
R
C
N
403
R
C
N
404
N
O
N
405
N
C
N
406
R
C
N
407
R
C
N
408
N
O
N
409
N
O
N
410
N
C
N
411
N
O
N
412
N
P
N
413
N
O
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
P
N
433
N
O
N
434
N
O
N
435
N
O
N
436
N
O
N
437
N
C
N
438
R
C
N
439
N
O
N
440
R
C
N
441
N
O
N
442
R
C
N
443
N
O
N
444
N
C
N
445
R
C
Y
446
N
N
Y
447
N
C
Y
448
N
N
Y
449
N
C
N
450
N
C
N
451
N
O
N
452
N
N
N
453
N
C
N
454
N
N
N
455
N
N
Y
456
N
C
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
N
N
474
N
C
N
475
N
N
N
476
N
C
N
477
N
C
N
478
N
C
N
479
N
O
N
480
N
O
N
481
S
C
N
482
R
C
N
483
N
O
N
484
S
C
N
485
R
C
N
486
N
O
N
487
N
O
N
488
N
C
N
489
N
O
N
490
N
P
N
491
N
O
N
492
N
O
N
493
N
O
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
O
N
508
N
P
N
509
N
O
N
510
N
O
N
511
N
O
N
512
N
C
N
513
R
C
N
514
N
O
N
515
S
C
N
516
N
O
N
517
R
C
N
518
N
O
N
519
R
C
N
520
N
N
N
521
N
C
N
522
N
O
N
523
N
N
N
524
N
C
N
525
N
O
N
526
N
C
N
527
N
C
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
Y
541
N
N
Y
542
N
N
Y
543
N
C
N
544
N
N
N
545
N
C
Y
546
N
C
Y
547
N
C
N
548
N
C
N
549
N
O
Y
550
N
N
Y
551
N
C
Y
552
N
N
N
553
N
C
Y
554
N
C
Y
555
N
C
N
556
N
C
N
557
N
C
N
558
R
C
N
559
N
C
N
560
N
O
N
561
N
O
N
562
N
C
N
563
N
N
N
564
N
C
N
565
N
O
N
566
N
O
N
567
N
C
N
568
R
C
N
569
R
C
N
570
N
O
N
571
S
C
N
572
N
O
N
573
R
C
N
574
N
O
N
575
N
C
N
576
N
O
N
577
N
P
N
578
N
O
N
579
N
O
N
580
N
O
N
581
N
H
N
582
N
H
N
583
N
H
N
584
N
H
N
585
N
H
N
586
N
H
N
587
N
H
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
H
N
597
N
H
N
598
N
H
N
599
N
H
N
600
N
H
N
601
N
H
N
602
N
H
N
603
N
H
N
604
N
H
N
605
N
H
N
606
N
H
N
607
N
H
N
608
N
H
N
609
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
N
30
N
sing
Y
31
N
doub
N
32
N
doub
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
doub
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
Y
67
N
sing
Y
68
N
sing
Y
69
N
doub
N
70
N
sing
Y
71
N
sing
N
72
N
sing
Y
73
N
doub
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
Y
232
N
sing
Y
233
N
sing
Y
234
N
doub
N
235
N
sing
Y
236
N
sing
Y
237
N
sing
Y
238
N
doub
N
239
N
sing
Y
240
N
doub
N
241
N
sing
N
242
N
sing
Y
243
N
sing
Y
244
N
doub
N
245
N
sing
Y
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
sing
Y
308
N
sing
Y
309
N
doub
N
310
N
sing
Y
311
N
sing
N
312
N
sing
Y
313
N
doub
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
Y
386
N
sing
Y
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
Y
392
N
doub
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
doub
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
doub
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
Y
474
N
sing
Y
475
N
sing
Y
476
N
doub
N
477
N
sing
Y
478
N
sing
N
479
N
sing
Y
480
N
doub
N
481
N
doub
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
doub
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
doub
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
doub
N
499
N
doub
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
doub
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
doub
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
doub
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
doub
N
556
N
sing
N
557
N
doub
N
558
N
sing
N
559
N
sing
Y
560
N
sing
N
561
N
sing
Y
562
N
sing
Y
563
N
doub
Y
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
Y
571
N
doub
Y
572
N
sing
N
573
N
sing
Y
574
N
sing
N
575
N
doub
Y
576
N
doub
Y
577
N
sing
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
N
582
N
sing
N
583
N
sing
Y
584
N
doub
N
585
N
sing
N
586
N
sing
N
587
N
sing
N
588
N
sing
N
589
N
sing
N
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
N
594
N
sing
N
595
N
doub
N
596
N
sing
N
597
N
sing
N
598
N
sing
N
599
N
sing
N
600
N
sing
N
601
N
sing
N
602
N
sing
N
603
N
doub
N
604
N
sing
N
605
N
sing
N
606
N
sing
N
607
N
sing
N
608
N
sing
N
609
N
sing
N
610
N
sing
N
611
N
sing
N
612
N
sing
N
613
N
sing
N
614
N
sing
N
615
N
sing
N
616
N
sing
N
617
N
sing
N
618
N
sing
N
619
N
sing
N
620
N
sing
N
621
N
sing
N
622
N
sing
N
623
N
sing
N
624
N
sing
N
625
N
sing
N
626
N
sing
N
627
N
doub
N
628
N
sing
N
629
N
sing
N
630
N
sing
N
631
N
sing
UK
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1978
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1978
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1978
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Crystal Structure of Yeast Phenylalanine T-RNA, Its Correlation to the Solution Structure and the Functional Implications
1978
UK
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Three-Dimensional Structure of a Transfer RNA in Two Crystal Forms
1976
National Biomedical Research Foundation, Silver Spring,Md.
Atlas of Protein Sequence and Structure (Data Section)
0435
0-912466-02-2
5
347
1972
10.2210/pdb6tna/pdb
pdb_00006tna
0.870900
-0.435700
0.227000
0.490400
0.803000
-0.339700
-0.034700
0.406600
0.912900
5.551400
7.130000
-1.278000
1
x-ray
1
1.0
24890.121
TRNAPHE
1
nat
polymer
24.305
MAGNESIUM ION
4
syn
non-polymer
18.015
water
84
nat
water
no
yes
GCGGAUUUA(2MG)CUCAG(H2U)(H2U)GGGAGAGC(M2G)CCAGA(OMC)U(OMG)AA(YG)A(PSU)(5MC)UGGAG
(7MG)UC(5MC)UGUG(5MU)(PSU)CG(1MA)UCCACAGAAUUCGCACCA
GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGUUCGAUCCACAGAAUUCGCACCA
A
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
baker's yeast
Saccharomyces
sample
4932
Saccharomyces cerevisiae
2.99
58.84
2.492
1
19
A
1
A
72
-3.329
A_G1:C72_A
1
-14.202
0.026
-0.049
-0.375
-2.514
1
19
A
2
A
71
-7.062
A_C2:G71_A
2
5.358
-0.410
-0.023
-0.216
-0.226
1
19
A
3
A
70
-5.130
A_G3:C70_A
3
-14.962
-0.062
0.458
-0.535
5.506
1
28
A
4
A
69
4.738
A_G4:U69_A
4
-0.285
-1.662
0.318
-0.607
0.060
1
20
A
5
A
68
-3.722
A_A5:U68_A
5
-9.088
0.225
0.437
-0.219
-4.987
1
20
A
6
A
67
-2.119
A_U6:A67_A
6
-19.913
-0.005
0.330
-0.134
-3.873
1
20
A
7
A
66
-8.368
A_U7:A66_A
7
3.658
-0.449
0.088
-0.189
0.265
1
19
A
49
A
65
-2.745
A_5MC49:G65_A
8
-3.971
0.048
-0.007
-0.381
0.235
1
20
A
50
A
64
-7.451
A_U50:A64_A
9
7.634
-0.203
0.191
-0.284
-1.543
1
19
A
51
A
63
-5.214
A_G51:C63_A
10
-5.215
-0.308
-0.180
-0.356
-0.814
1
20
A
52
A
62
-3.100
A_U52:A62_A
11
-4.986
-0.078
0.209
-0.166
1.534
1
19
A
53
A
61
-0.916
A_G53:C61_A
12
-0.824
-0.267
0.212
0.005
2.007
4
24
A
54
A
58
-106.907
A_5MU54:1MA58_A
13
7.656
4.074
0.020
-1.555
28.228
2
A
55
A
18
-85.761
A_PSU55:G18_A
14
9.694
0.637
0.592
-5.583
2.832
1
21
A
39
A
31
-7.234
A_PSU39:A31_A
15
-2.037
-1.219
0.859
0.133
6.111
1
19
A
40
A
30
-2.625
A_5MC40:G30_A
16
-18.204
-0.213
0.028
-0.426
0.316
1
20
A
41
A
29
-4.096
A_U41:A29_A
17
2.620
-0.524
-0.064
-0.128
-2.330
1
19
A
42
A
28
0.995
A_G42:C28_A
18
-6.772
-0.035
-0.079
-0.211
-5.610
1
19
A
43
A
27
-0.697
A_G43:C27_A
19
-14.632
-0.662
-0.008
-0.021
-22.852
1
8
A
44
A
26
-13.189
A_A44:M2G26_A
20
-22.358
-1.344
0.065
1.628
-1.193
1
19
A
10
A
25
-2.890
A_2MG10:C25_A
21
-5.080
-0.023
-0.125
-0.149
-3.830
1
19
A
11
A
24
-1.551
A_C11:G24_A
22
7.523
0.120
0.395
-0.059
-2.930
1
20
A
12
A
23
-4.321
A_U12:A23_A
23
-5.508
-0.045
0.101
0.032
1.635
1
19
A
13
A
22
-2.651
A_C13:G22_A
24
-2.927
0.262
0.144
-0.016
0.925
4
24
A
14
A
8
-103.019
A_A14:U8_A
25
13.796
-3.828
1.047
-1.705
-1.739
2
22
A
15
A
48
157.026
A_G15:C48_A
26
9.428
0.063
-0.097
3.930
-27.288
1
19
A
19
A
56
-2.418
A_G19:C56_A
27
-25.860
0.127
0.166
-0.342
2.746
26.681
A
A
1
2
12.096
A
A
72
71
3.259
5.508
-0.245
-2.120
AA_G1C2:G71C72_AA
1
-5.210
11.442
25.600
-5.941
-0.743
2.865
34.853
A
A
2
3
9.416
A
A
71
70
3.101
5.609
0.515
-1.487
AA_C2G3:C70G71_AA
2
3.346
-5.618
34.254
-3.266
-0.392
1.850
31.723
A
A
3
4
21.461
A
A
70
69
2.686
11.478
0.763
-1.847
AA_G3G4:U69C70_AA
3
-0.376
0.703
29.621
-4.896
-1.446
2.881
41.372
A
A
4
5
10.962
A
A
69
68
3.193
7.702
-0.597
-1.563
AA_G4A5:U68U69_AA
4
-1.420
2.021
40.656
-2.985
0.702
2.863
30.532
A
A
5
6
11.909
A
A
68
67
3.313
6.228
0.222
-1.946
AA_A5U6:A67U68_AA
5
0.801
-1.531
29.894
-4.877
-0.269
2.462
34.225
A
A
6
7
21.009
A
A
67
66
3.232
12.110
-0.309
-1.635
AA_U6U7:A66A67_AA
6
0.934
-1.620
32.058
-4.497
0.657
3.147
36.479
A
A
7
49
0.396
A
A
66
65
3.176
0.248
-0.182
-1.877
AA_U75MC49:G65A66_AA
7
2.232
-3.568
36.412
-3.032
0.590
3.081
30.422
A
A
49
50
4.360
A
A
65
64
3.170
2.271
-0.701
-2.148
AA_5MC49U50:A64G65_AA
8
-6.082
11.676
29.738
-4.533
0.159
2.301
31.541
A
A
50
51
19.539
A
A
64
63
3.116
10.378
0.073
-1.911
AA_U50G51:C63A64_AA
9
5.431
-10.225
29.336
-5.175
0.734
3.312
34.218
A
A
51
52
6.694
A
A
63
62
3.536
3.920
-0.035
-1.600
AA_G51U52:A62C63_AA
10
-4.397
7.509
33.722
-3.372
-0.671
3.080
30.074
A
A
52
53
-0.943
A
A
62
61
3.005
-0.489
1.098
-1.907
AA_U52G53:C61A62_AA
11
1.346
-2.596
30.041
-3.581
-1.860
3.279
92.329
A
A
53
54
-0.989
A
A
61
58
3.410
-1.425
-2.404
-2.939
AA_G535MU54:1MA58C61_AA
12
7.837
-5.437
92.062
-2.010
1.819
2.963
46.405
A
A
54
55
15.158
A
A
58
18
3.424
11.802
2.246
-2.425
AA_5MU54PSU55:G181MA58_AA
13
5.352
-6.874
44.655
-4.073
-2.399
2.712
36.190
A
A
39
40
5.611
A
A
31
30
2.897
3.477
-0.888
-1.100
AA_PSU395MC40:G30A31_AA
14
2.631
-4.245
35.935
-2.191
1.747
3.312
30.567
A
A
40
41
2.562
A
A
30
29
3.397
1.343
-0.464
-2.586
AA_5MC40U41:A29G30_AA
15
-5.366
10.232
30.074
-5.181
-0.219
3.165
30.649
A
A
41
42
12.138
A
A
29
28
3.527
6.360
0.221
-1.443
AA_U41G42:C28A29_AA
16
3.192
-6.092
29.831
-4.031
0.235
2.932
32.687
A
A
42
43
7.969
A
A
28
27
3.176
4.472
0.461
-1.600
AA_G42G43:C27C28_AA
17
-0.155
0.277
32.388
-3.569
-0.845
2.849
35.064
A
A
43
44
15.604
A
A
27
26
3.444
9.254
-0.341
-1.474
AA_G43A44:M2G26C27_AA
18
5.819
-9.813
33.367
-3.818
1.428
2.057
71.416
A
A
44
10
11.247
A
A
26
25
3.268
12.964
-2.861
-2.860
AA_A442MG10:C25M2G26_AA
19
17.945
-15.568
68.336
-2.821
2.964
2.966
38.016
A
A
10
11
6.300
A
A
25
24
3.070
4.079
-0.800
-1.695
AA_2MG10C11:G24C25_AA
20
-6.310
9.747
37.293
-3.086
0.480
2.991
32.079
A
A
11
12
9.164
A
A
24
23
3.336
5.015
-0.168
-1.422
AA_C11U12:A23G24_AA
21
6.073
-11.097
31.122
-3.460
1.376
3.126
27.019
A
A
12
13
6.166
A
A
23
22
3.141
2.864
1.618
-2.021
AA_U12C13:G22A23_AA
22
4.258
-9.167
26.536
-5.030
-2.416
2.835
60.961
A
A
13
14
-9.848
A
A
22
8
3.063
-9.937
-2.280
-0.379
AA_C13A14:U8G22_AA
23
6.891
-6.829
59.863
0.060
2.548
4.026
-67.287
A
A
14
15
-14.242
A
A
8
48
3.245
15.652
2.349
-3.283
AA_A14G15:C48U8_AA
24
-5.911
-5.379
-65.412
2.276
1.861
atom_site
atom_sites
chem_comp_atom
chem_comp_bond
database_2
database_PDB_matrix
pdbx_database_remark
pdbx_struct_conn_angle
pdbx_validate_close_contact
pdbx_validate_rmsd_angle
pdbx_validate_symm_contact
struct_conn
struct_site
repository
Initial release
Coordinates and associated ncs operations (if present) transformed into standard crystal frame
repository
Remediation
Version format compliance
Advisory
Version format compliance
Advisory
Atomic model
Data collection
Database references
Derived calculations
Other
1
0
1979-01-16
1
1
2008-05-22
1
2
2011-07-13
2
0
2023-09-27
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_sites.fract_transf_matrix[1][1]
_atom_sites.fract_transf_matrix[1][2]
_atom_sites.fract_transf_matrix[1][3]
_atom_sites.fract_transf_matrix[2][1]
_atom_sites.fract_transf_matrix[2][2]
_atom_sites.fract_transf_matrix[2][3]
_atom_sites.fract_transf_matrix[3][1]
_atom_sites.fract_transf_matrix[3][2]
_atom_sites.fract_transf_matrix[3][3]
_atom_sites.fract_transf_vector[1]
_atom_sites.fract_transf_vector[2]
_atom_sites.fract_transf_vector[3]
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_database_PDB_matrix.origx[1][1]
_database_PDB_matrix.origx[1][2]
_database_PDB_matrix.origx[1][3]
_database_PDB_matrix.origx[2][1]
_database_PDB_matrix.origx[2][2]
_database_PDB_matrix.origx[2][3]
_database_PDB_matrix.origx[3][1]
_database_PDB_matrix.origx[3][2]
_database_PDB_matrix.origx[3][3]
_database_PDB_matrix.origx_vector[1]
_database_PDB_matrix.origx_vector[2]
_database_PDB_matrix.origx_vector[3]
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_pdbx_validate_close_contact.dist
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1979-01-16
SPRSDE
BNL
Y
BNL
1978-11-16
REL
MG
MAGNESIUM ION
HOH
water
MO5
77
2
MG
MG
77
A
MO4
78
2
MG
MG
78
A
MO6
79
2
MG
MG
79
A
MO5
80
2
MG
MG
80
A
HOH
81
3
HOH
HOH
81
A
HOH
82
3
HOH
HOH
82
A
HOH
83
3
HOH
HOH
83
A
HOH
84
3
HOH
HOH
84
A
HOH
85
3
HOH
HOH
85
A
HOH
86
3
HOH
HOH
86
A
HOH
87
3
HOH
HOH
87
A
HOH
88
3
HOH
HOH
88
A
HOH
89
3
HOH
HOH
89
A
HOH
90
3
HOH
HOH
90
A
HOH
91
3
HOH
HOH
91
A
HOH
92
3
HOH
HOH
92
A
HOH
93
3
HOH
HOH
93
A
HOH
94
3
HOH
HOH
94
A
HOH
95
3
HOH
HOH
95
A
HOH
96
3
HOH
HOH
96
A
HOH
97
3
HOH
HOH
97
A
HOH
98
3
HOH
HOH
98
A
HOH
99
3
HOH
HOH
99
A
HOH
100
3
HOH
HOH
100
A
HOH
101
3
HOH
HOH
101
A
HOH
102
3
HOH
HOH
102
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
105
3
HOH
HOH
105
A
HOH
106
3
HOH
HOH
106
A
HOH
107
3
HOH
HOH
107
A
HOH
108
3
HOH
HOH
108
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
125
3
HOH
HOH
125
A
HOH
126
3
HOH
HOH
126
A
HOH
127
3
HOH
HOH
127
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
MO5
77
3
HOH
HOH
145
A
MO5
77
3
HOH
HOH
146
A
MO5
77
3
HOH
HOH
147
A
MO5
77
3
HOH
HOH
148
A
MO5
77
3
HOH
HOH
149
A
MO4
78
3
HOH
HOH
150
A
MO4
78
3
HOH
HOH
151
A
MO4
78
3
HOH
HOH
152
A
MO4
78
3
HOH
HOH
153
A
MO6
79
3
HOH
HOH
154
A
MO6
79
3
HOH
HOH
155
A
MO6
79
3
HOH
HOH
156
A
MO6
79
3
HOH
HOH
157
A
MO6
79
3
HOH
HOH
158
A
MO6
79
3
HOH
HOH
159
A
MO5
80
3
HOH
HOH
160
A
MO5
80
3
HOH
HOH
161
A
MO5
80
3
HOH
HOH
162
A
MO5
80
3
HOH
HOH
163
A
MO5
80
3
HOH
HOH
164
A
G
1
n
1
G
1
A
C
2
n
2
C
2
A
G
3
n
3
G
3
A
G
4
n
4
G
4
A
A
5
n
5
A
5
A
U
6
n
6
U
6
A
U
7
n
7
U
7
A
U
8
n
8
U
8
A
A
9
n
9
A
9
A
2MG
10
n
10
2MG
10
A
C
11
n
11
C
11
A
U
12
n
12
U
12
A
C
13
n
13
C
13
A
A
14
n
14
A
14
A
G
15
n
15
G
15
A
H2U
16
n
16
H2U
16
A
H2U
17
n
17
H2U
17
A
G
18
n
18
G
18
A
G
19
n
19
G
19
A
G
20
n
20
G
20
A
A
21
n
21
A
21
A
G
22
n
22
G
22
A
A
23
n
23
A
23
A
G
24
n
24
G
24
A
C
25
n
25
C
25
A
M2G
26
n
26
M2G
26
A
C
27
n
27
C
27
A
C
28
n
28
C
28
A
A
29
n
29
A
29
A
G
30
n
30
G
30
A
A
31
n
31
A
31
A
OMC
32
n
32
OMC
32
A
U
33
n
33
U
33
A
OMG
34
n
34
OMG
34
A
A
35
n
35
A
35
A
A
36
n
36
A
36
A
YG
37
n
37
YG
37
A
A
38
n
38
A
38
A
PSU
39
n
39
PSU
39
A
5MC
40
n
40
5MC
40
A
U
41
n
41
U
41
A
G
42
n
42
G
42
A
G
43
n
43
G
43
A
A
44
n
44
A
44
A
G
45
n
45
G
45
A
7MG
46
n
46
7MG
46
A
U
47
n
47
U
47
A
C
48
n
48
C
48
A
5MC
49
n
49
5MC
49
A
U
50
n
50
U
50
A
G
51
n
51
G
51
A
U
52
n
52
U
52
A
G
53
n
53
G
53
A
5MU
54
n
54
5MU
54
A
PSU
55
n
55
PSU
55
A
C
56
n
56
C
56
A
G
57
n
57
G
57
A
1MA
58
n
58
1MA
58
A
U
59
n
59
U
59
A
C
60
n
60
C
60
A
C
61
n
61
C
61
A
A
62
n
62
A
62
A
C
63
n
63
C
63
A
A
64
n
64
A
64
A
G
65
n
65
G
65
A
A
66
n
66
A
66
A
A
67
n
67
A
67
A
U
68
n
68
U
68
A
U
69
n
69
U
69
A
C
70
n
70
C
70
A
G
71
n
71
G
71
A
C
72
n
72
C
72
A
A
73
n
73
A
73
A
C
74
n
74
C
74
A
C
75
n
75
C
75
A
A
76
n
76
A
76
A
author_defined_assembly
1
monomeric
A
G
19
A
OP1
G
19
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
145
F
O
HOH
1_555
89.0
A
G
19
A
OP1
G
19
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
146
F
O
HOH
1_555
91.1
A
HOH
145
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
146
F
O
HOH
1_555
180.0
A
G
19
A
OP1
G
19
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
147
F
O
HOH
1_555
85.9
A
HOH
145
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
147
F
O
HOH
1_555
90.0
A
HOH
146
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
147
F
O
HOH
1_555
90.0
A
G
19
A
OP1
G
19
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
148
F
O
HOH
1_555
94.1
A
HOH
145
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
148
F
O
HOH
1_555
90.0
A
HOH
146
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
148
F
O
HOH
1_555
90.0
A
HOH
147
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
148
F
O
HOH
1_555
180.0
A
G
19
A
OP1
G
19
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
149
F
O
HOH
1_555
175.8
A
HOH
145
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
149
F
O
HOH
1_555
90.0
A
HOH
146
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
149
F
O
HOH
1_555
90.0
A
HOH
147
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
149
F
O
HOH
1_555
90.0
A
HOH
148
F
O
HOH
1_555
A
MG
77
B
MG
MG
1_555
A
HOH
149
F
O
HOH
1_555
90.0
A
G
20
A
OP1
G
20
1_555
A
MG
78
C
MG
MG
1_555
A
A
21
A
OP2
A
21
1_555
87.4
A
G
20
A
OP1
G
20
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
150
F
O
HOH
1_555
174.5
A
A
21
A
OP2
A
21
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
150
F
O
HOH
1_555
97.9
A
G
20
A
OP1
G
20
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
151
F
O
HOH
1_555
88.5
A
A
21
A
OP2
A
21
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
151
F
O
HOH
1_555
94.4
A
HOH
150
F
O
HOH
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
151
F
O
HOH
1_555
90.0
A
G
20
A
OP1
G
20
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
152
F
O
HOH
1_555
91.5
A
A
21
A
OP2
A
21
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
152
F
O
HOH
1_555
85.6
A
HOH
150
F
O
HOH
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
152
F
O
HOH
1_555
90.0
A
HOH
151
F
O
HOH
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
152
F
O
HOH
1_555
179.9
A
G
20
A
OP1
G
20
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
153
F
O
HOH
1_555
84.8
A
A
21
A
OP2
A
21
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
153
F
O
HOH
1_555
170.9
A
HOH
150
F
O
HOH
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
153
F
O
HOH
1_555
90.0
A
HOH
151
F
O
HOH
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
153
F
O
HOH
1_555
90.0
A
HOH
152
F
O
HOH
1_555
A
MG
78
C
MG
MG
1_555
A
HOH
153
F
O
HOH
1_555
90.0
A
YG
37
A
OP2
YG
37
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
160
F
O
HOH
1_555
112.2
A
YG
37
A
OP2
YG
37
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
161
F
O
HOH
1_555
67.8
A
HOH
160
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
161
F
O
HOH
1_555
180.0
A
YG
37
A
OP2
YG
37
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
162
F
O
HOH
1_555
69.7
A
HOH
160
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
162
F
O
HOH
1_555
90.0
A
HOH
161
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
162
F
O
HOH
1_555
90.0
A
YG
37
A
OP2
YG
37
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
163
F
O
HOH
1_555
110.3
A
HOH
160
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
163
F
O
HOH
1_555
90.0
A
HOH
161
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
163
F
O
HOH
1_555
90.0
A
HOH
162
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
163
F
O
HOH
1_555
180.0
A
YG
37
A
OP2
YG
37
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
164
F
O
HOH
1_555
149.2
A
HOH
160
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
164
F
O
HOH
1_555
90.0
A
HOH
161
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
164
F
O
HOH
1_555
90.0
A
HOH
162
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
164
F
O
HOH
1_555
90.0
A
HOH
163
F
O
HOH
1_555
A
MG
80
E
MG
MG
1_555
A
HOH
164
F
O
HOH
1_555
90.0
A
HOH
154
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
155
F
O
HOH
1_555
180.0
A
HOH
154
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
156
F
O
HOH
1_555
90.0
A
HOH
155
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
156
F
O
HOH
1_555
90.0
A
HOH
154
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
157
F
O
HOH
1_555
90.0
A
HOH
155
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
157
F
O
HOH
1_555
90.0
A
HOH
156
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
157
F
O
HOH
1_555
180.0
A
HOH
154
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
158
F
O
HOH
1_555
90.0
A
HOH
155
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
158
F
O
HOH
1_555
90.0
A
HOH
156
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
158
F
O
HOH
1_555
90.0
A
HOH
157
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
158
F
O
HOH
1_555
90.0
A
HOH
154
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
159
F
O
HOH
1_555
90.0
A
HOH
155
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
159
F
O
HOH
1_555
90.0
A
HOH
156
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
159
F
O
HOH
1_555
90.0
A
HOH
157
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
159
F
O
HOH
1_555
90.0
A
HOH
158
F
O
HOH
1_555
A
MG
79
D
MG
MG
1_555
A
HOH
159
F
O
HOH
1_555
180.0
A
2MG
10
2N-METHYLGUANOSINE-5'-MONOPHOSPHATE
A
2MG
10
G
A
H2U
16
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
A
H2U
16
U
A
H2U
17
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
A
H2U
17
U
A
M2G
26
N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
A
M2G
26
G
A
OMC
32
O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
A
OMC
32
C
A
OMG
34
O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
A
OMG
34
G
A
YG
37
WYBUTOSINE
A
YG
37
G
A
PSU
39
PSEUDOURIDINE-5'-MONOPHOSPHATE
A
PSU
39
U
A
5MC
40
5-METHYLCYTIDINE-5'-MONOPHOSPHATE
A
5MC
40
C
A
7MG
46
A
7MG
46
G
A
5MC
49
5-METHYLCYTIDINE-5'-MONOPHOSPHATE
A
5MC
49
C
A
5MU
54
5-METHYLURIDINE 5'-MONOPHOSPHATE
A
5MU
54
U
A
PSU
55
PSEUDOURIDINE-5'-MONOPHOSPHATE
A
PSU
55
U
A
1MA
58
A
1MA
58
A
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
C15
YG
37
WRONG HAND
1
A
A
OP2
O
C
HOH
13
129
1.53
1
A
A
O
O
HOH
HOH
133
159
1.56
1
A
A
OP2
O
A
HOH
73
111
1.71
1
A
A
O3'
O
U
HOH
12
129
1.83
1
A
A
OP2
O
U
HOH
12
157
1.86
1
A
A
C3'
O
U
HOH
12
129
1.87
1
A
A
P
O
C
HOH
13
129
1.90
1
A
A
OP2
O
G
HOH
4
140
1.97
1
A
A
O3'
O
G
HOH
45
102
1.98
1
A
A
OP2
O
U
HOH
47
116
1.99
1
A
A
O5'
O
C
HOH
25
92
2.00
1
A
A
O2
O
C
HOH
2
105
2.02
1
A
A
C4'
O
7MG
HOH
46
102
2.04
1
A
A
P
O
7MG
HOH
46
102
2.04
1
A
A
O6
O
G
HOH
45
112
2.05
1
A
A
OP1
O
7MG
HOH
46
102
2.06
1
A
A
O3'
O
G
HOH
45
128
2.08
1
A
A
OP2
O
C
HOH
11
133
2.09
1
A
A
O5'
O
7MG
HOH
46
102
2.13
1
A
A
OP2
O
C
HOH
25
92
2.14
1
A
A
OP2
O
H2U
HOH
16
139
2.14
1
8.91
1.20
119.70
128.61
A
A
A
C3'
O3'
P
G
G
G
18
18
19
Y
1
-7.44
1.20
119.70
112.26
A
A
A
C3'
O3'
P
A
A
G
29
29
30
Y
1
-8.40
1.20
119.70
111.30
A
A
A
C3'
O3'
P
A
A
PSU
38
38
39
Y
1
-5.78
0.70
109.70
103.92
A
A
A
C1'
O4'
C4'
G
G
G
57
57
57
N
1
-7.20
1.20
119.70
112.50
A
A
A
C3'
O3'
P
A
A
A
66
66
67
Y
1
A
A
O6
O3'
OMG
A
34
76
1.46
1_555
3_465
1
A
A
C5'
O
YG
HOH
37
131
1.66
1_555
3_465
1
A
A
C2'
O
A
HOH
76
125
1.76
1_555
3_465
1
A
A
C5
O2'
H2U
A
17
23
1.77
1_555
3_555
1
A
A
N7
O
G
HOH
19
101
1.80
1_555
3_555
1
A
A
O5'
O
YG
HOH
37
131
1.82
1_555
3_465
1
A
A
O2'
O
A
HOH
76
125
2.06
1_555
3_465
1
A
A
C8
O
G
HOH
19
101
2.11
1_555
3_555
1
A
A
C6
C5'
H2U
G
17
24
2.11
1_555
3_555
1
A
A
C5
C5'
H2U
G
17
24
2.15
1_555
3_555
1
A
A
C4
O2'
H2U
A
17
23
2.17
1_555
3_555
0.1980000
2.700
8426
1
2.700
84
1740
4
1652
0
refinement
CORELS
CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENT
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
covale
1.587
both
A
A
9
A
O3'
A
9
1_555
A
2MG
10
A
P
2MG
10
1_555
covale
1.590
both
A
2MG
10
A
O3'
2MG
10
1_555
A
C
11
A
P
C
11
1_555
covale
1.611
both
A
G
15
A
O3'
G
15
1_555
A
H2U
16
A
P
H2U
16
1_555
covale
1.603
both
A
H2U
16
A
O3'
H2U
16
1_555
A
H2U
17
A
P
H2U
17
1_555
covale
1.590
both
A
H2U
17
A
O3'
H2U
17
1_555
A
G
18
A
P
G
18
1_555
covale
1.610
both
A
C
25
A
O3'
C
25
1_555
A
M2G
26
A
P
M2G
26
1_555
covale
1.592
both
A
M2G
26
A
O3'
M2G
26
1_555
A
C
27
A
P
C
27
1_555
covale
1.599
both
A
A
31
A
O3'
A
31
1_555
A
OMC
32
A
P
OMC
32
1_555
covale
1.602
both
A
OMC
32
A
O3'
OMC
32
1_555
A
U
33
A
P
U
33
1_555
covale
1.596
both
A
U
33
A
O3'
U
33
1_555
A
OMG
34
A
P
OMG
34
1_555
covale
1.598
both
A
OMG
34
A
O3'
OMG
34
1_555
A
A
35
A
P
A
35
1_555
covale
1.590
both
A
A
36
A
O3'
A
36
1_555
A
YG
37
A
P
YG
37
1_555
covale
1.593
both
A
YG
37
A
O3'
YG
37
1_555
A
A
38
A
P
A
38
1_555
covale
1.618
both
A
A
38
A
O3'
A
38
1_555
A
PSU
39
A
P
PSU
39
1_555
covale
1.591
both
A
PSU
39
A
O3'
PSU
39
1_555
A
5MC
40
A
P
5MC
40
1_555
covale
1.602
both
A
5MC
40
A
O3'
5MC
40
1_555
A
U
41
A
P
U
41
1_555
covale
1.592
both
A
G
45
A
O3'
G
45
1_555
A
7MG
46
A
P
7MG
46
1_555
covale
1.598
both
A
7MG
46
A
O3'
7MG
46
1_555
A
U
47
A
P
U
47
1_555
covale
1.589
both
A
C
48
A
O3'
C
48
1_555
A
5MC
49
A
P
5MC
49
1_555
covale
1.595
both
A
5MC
49
A
O3'
5MC
49
1_555
A
U
50
A
P
U
50
1_555
covale
1.593
both
A
G
53
A
O3'
G
53
1_555
A
5MU
54
A
P
5MU
54
1_555
covale
1.599
both
A
5MU
54
A
O3'
5MU
54
1_555
A
PSU
55
A
P
PSU
55
1_555
covale
1.590
both
A
PSU
55
A
O3'
PSU
55
1_555
A
C
56
A
P
C
56
1_555
covale
1.594
both
A
G
57
A
O3'
G
57
1_555
A
1MA
58
A
P
1MA
58
1_555
covale
1.587
both
A
1MA
58
A
O3'
1MA
58
1_555
A
U
59
A
P
U
59
1_555
metalc
1.907
A
G
19
A
OP1
G
19
1_555
A
MG
77
B
MG
MG
1_555
metalc
2.334
A
G
20
A
OP1
G
20
1_555
A
MG
78
C
MG
MG
1_555
metalc
1.758
A
A
21
A
OP2
A
21
1_555
A
MG
78
C
MG
MG
1_555
metalc
2.261
A
YG
37
A
OP2
YG
37
1_555
A
MG
80
E
MG
MG
1_555
metalc
2.000
A
MG
77
B
MG
MG
1_555
A
HOH
145
F
O
HOH
1_555
metalc
2.000
A
MG
77
B
MG
MG
1_555
A
HOH
146
F
O
HOH
1_555
metalc
1.999
A
MG
77
B
MG
MG
1_555
A
HOH
147
F
O
HOH
1_555
metalc
1.999
A
MG
77
B
MG
MG
1_555
A
HOH
148
F
O
HOH
1_555
metalc
2.000
A
MG
77
B
MG
MG
1_555
A
HOH
149
F
O
HOH
1_555
metalc
2.000
A
MG
78
C
MG
MG
1_555
A
HOH
150
F
O
HOH
1_555
metalc
2.001
A
MG
78
C
MG
MG
1_555
A
HOH
151
F
O
HOH
1_555
metalc
2.000
A
MG
78
C
MG
MG
1_555
A
HOH
152
F
O
HOH
1_555
metalc
2.000
A
MG
78
C
MG
MG
1_555
A
HOH
153
F
O
HOH
1_555
metalc
2.000
A
MG
79
D
MG
MG
1_555
A
HOH
154
F
O
HOH
1_555
metalc
2.000
A
MG
79
D
MG
MG
1_555
A
HOH
155
F
O
HOH
1_555
metalc
2.000
A
MG
79
D
MG
MG
1_555
A
HOH
156
F
O
HOH
1_555
metalc
2.000
A
MG
79
D
MG
MG
1_555
A
HOH
157
F
O
HOH
1_555
metalc
2.000
A
MG
79
D
MG
MG
1_555
A
HOH
158
F
O
HOH
1_555
metalc
2.000
A
MG
79
D
MG
MG
1_555
A
HOH
159
F
O
HOH
1_555
metalc
2.000
A
MG
80
E
MG
MG
1_555
A
HOH
160
F
O
HOH
1_555
metalc
1.998
A
MG
80
E
MG
MG
1_555
A
HOH
161
F
O
HOH
1_555
metalc
2.000
A
MG
80
E
MG
MG
1_555
A
HOH
162
F
O
HOH
1_555
metalc
2.000
A
MG
80
E
MG
MG
1_555
A
HOH
163
F
O
HOH
1_555
metalc
2.000
A
MG
80
E
MG
MG
1_555
A
HOH
164
F
O
HOH
1_555
hydrog
WATSON-CRICK
A
G
1
A
N1
G
1
1_555
A
C
72
A
N3
C
72
1_555
hydrog
WATSON-CRICK
A
G
1
A
N2
G
1
1_555
A
C
72
A
O2
C
72
1_555
hydrog
WATSON-CRICK
A
G
1
A
O6
G
1
1_555
A
C
72
A
N4
C
72
1_555
hydrog
WATSON-CRICK
A
C
2
A
N3
C
2
1_555
A
G
71
A
N1
G
71
1_555
hydrog
WATSON-CRICK
A
C
2
A
N4
C
2
1_555
A
G
71
A
O6
G
71
1_555
hydrog
WATSON-CRICK
A
C
2
A
O2
C
2
1_555
A
G
71
A
N2
G
71
1_555
hydrog
WATSON-CRICK
A
G
3
A
N1
G
3
1_555
A
C
70
A
N3
C
70
1_555
hydrog
WATSON-CRICK
A
G
3
A
N2
G
3
1_555
A
C
70
A
O2
C
70
1_555
hydrog
WATSON-CRICK
A
G
3
A
O6
G
3
1_555
A
C
70
A
N4
C
70
1_555
hydrog
TYPE_28_PAIR
A
G
4
A
N1
G
4
1_555
A
U
69
A
O2
U
69
1_555
hydrog
TYPE_28_PAIR
A
G
4
A
O6
G
4
1_555
A
U
69
A
N3
U
69
1_555
hydrog
WATSON-CRICK
A
A
5
A
N1
A
5
1_555
A
U
68
A
N3
U
68
1_555
hydrog
WATSON-CRICK
A
A
5
A
N6
A
5
1_555
A
U
68
A
O4
U
68
1_555
hydrog
WATSON-CRICK
A
U
6
A
N3
U
6
1_555
A
A
67
A
N1
A
67
1_555
hydrog
WATSON-CRICK
A
U
6
A
O4
U
6
1_555
A
A
67
A
N6
A
67
1_555
hydrog
WATSON-CRICK
A
U
7
A
N3
U
7
1_555
A
A
66
A
N1
A
66
1_555
hydrog
WATSON-CRICK
A
U
7
A
O4
U
7
1_555
A
A
66
A
N6
A
66
1_555
hydrog
REVERSED HOOGSTEEN
A
U
8
A
N3
U
8
1_555
A
A
14
A
N7
A
14
1_555
hydrog
REVERSED HOOGSTEEN
A
U
8
A
O2
U
8
1_555
A
A
14
A
N6
A
14
1_555
hydrog
TYPE_2_PAIR
A
A
9
A
N6
A
9
1_555
A
A
23
A
N7
A
23
1_555
hydrog
TYPE_2_PAIR
A
A
9
A
N7
A
9
1_555
A
A
23
A
N6
A
23
1_555
hydrog
WATSON-CRICK
A
2MG
10
A
N1
2MG
10
1_555
A
C
25
A
N3
C
25
1_555
hydrog
WATSON-CRICK
A
2MG
10
A
N2
2MG
10
1_555
A
C
25
A
O2
C
25
1_555
hydrog
WATSON-CRICK
A
2MG
10
A
O6
2MG
10
1_555
A
C
25
A
N4
C
25
1_555
hydrog
2MG-G MISPAIR
A
2MG
10
A
O6
2MG
10
1_555
A
G
45
A
N2
G
45
1_555
hydrog
WATSON-CRICK
A
C
11
A
N3
C
11
1_555
A
G
24
A
N1
G
24
1_555
hydrog
WATSON-CRICK
A
C
11
A
N4
C
11
1_555
A
G
24
A
O6
G
24
1_555
hydrog
WATSON-CRICK
A
C
11
A
O2
C
11
1_555
A
G
24
A
N2
G
24
1_555
hydrog
WATSON-CRICK
A
U
12
A
N3
U
12
1_555
A
A
23
A
N1
A
23
1_555
hydrog
WATSON-CRICK
A
U
12
A
O4
U
12
1_555
A
A
23
A
N6
A
23
1_555
hydrog
WATSON-CRICK
A
C
13
A
N3
C
13
1_555
A
G
22
A
N1
G
22
1_555
hydrog
WATSON-CRICK
A
C
13
A
N4
C
13
1_555
A
G
22
A
O6
G
22
1_555
hydrog
WATSON-CRICK
A
C
13
A
O2
C
13
1_555
A
G
22
A
N2
G
22
1_555
hydrog
REVERSED WATSON-CRICK
A
G
15
A
N1
G
15
1_555
A
C
48
A
O2
C
48
1_555
hydrog
REVERSED WATSON-CRICK
A
G
15
A
N2
G
15
1_555
A
C
48
A
N3
C
48
1_555
hydrog
G-PSU MISPAIR
A
G
18
A
N1
G
18
1_555
A
PSU
55
A
O4
PSU
55
1_555
hydrog
WATSON-CRICK
A
G
19
A
N1
G
19
1_555
A
C
56
A
N3
C
56
1_555
hydrog
WATSON-CRICK
A
G
19
A
N2
G
19
1_555
A
C
56
A
O2
C
56
1_555
hydrog
WATSON-CRICK
A
G
19
A
O6
G
19
1_555
A
C
56
A
N4
C
56
1_555
hydrog
TYPE_7_PAIR
A
G
22
A
N7
G
22
1_555
A
7MG
46
A
N1
7MG
46
1_555
hydrog
TYPE_7_PAIR
A
G
22
A
O6
G
22
1_555
A
7MG
46
A
N2
7MG
46
1_555
hydrog
TYPE_8_PAIR
A
M2G
26
A
N1
M2G
26
1_555
A
A
44
A
N1
A
44
1_555
hydrog
TYPE_8_PAIR
A
M2G
26
A
O6
M2G
26
1_555
A
A
44
A
N6
A
44
1_555
hydrog
WATSON-CRICK
A
C
27
A
N3
C
27
1_555
A
G
43
A
N1
G
43
1_555
hydrog
WATSON-CRICK
A
C
27
A
N4
C
27
1_555
A
G
43
A
O6
G
43
1_555
hydrog
WATSON-CRICK
A
C
27
A
O2
C
27
1_555
A
G
43
A
N2
G
43
1_555
hydrog
WATSON-CRICK
A
C
28
A
N3
C
28
1_555
A
G
42
A
N1
G
42
1_555
hydrog
WATSON-CRICK
A
C
28
A
N4
C
28
1_555
A
G
42
A
O6
G
42
1_555
hydrog
WATSON-CRICK
A
C
28
A
O2
C
28
1_555
A
G
42
A
N2
G
42
1_555
hydrog
WATSON-CRICK
A
A
29
A
N1
A
29
1_555
A
U
41
A
N3
U
41
1_555
hydrog
WATSON-CRICK
A
A
29
A
N6
A
29
1_555
A
U
41
A
O4
U
41
1_555
hydrog
WATSON-CRICK
A
G
30
A
N1
G
30
1_555
A
5MC
40
A
N3
5MC
40
1_555
hydrog
WATSON-CRICK
A
G
30
A
N2
G
30
1_555
A
5MC
40
A
O2
5MC
40
1_555
hydrog
WATSON-CRICK
A
G
30
A
O6
G
30
1_555
A
5MC
40
A
N4
5MC
40
1_555
hydrog
REVERSED WATSON-CRICK
A
A
31
A
N1
A
31
1_555
A
PSU
39
A
N3
PSU
39
1_555
hydrog
REVERSED WATSON-CRICK
A
A
31
A
N6
A
31
1_555
A
PSU
39
A
O2
PSU
39
1_555
hydrog
WATSON-CRICK
A
5MC
49
A
N3
5MC
49
1_555
A
G
65
A
N1
G
65
1_555
hydrog
WATSON-CRICK
A
5MC
49
A
N4
5MC
49
1_555
A
G
65
A
O6
G
65
1_555
hydrog
WATSON-CRICK
A
5MC
49
A
O2
5MC
49
1_555
A
G
65
A
N2
G
65
1_555
hydrog
WATSON-CRICK
A
U
50
A
N3
U
50
1_555
A
A
64
A
N1
A
64
1_555
hydrog
WATSON-CRICK
A
U
50
A
O4
U
50
1_555
A
A
64
A
N6
A
64
1_555
hydrog
WATSON-CRICK
A
G
51
A
N1
G
51
1_555
A
C
63
A
N3
C
63
1_555
hydrog
WATSON-CRICK
A
G
51
A
N2
G
51
1_555
A
C
63
A
O2
C
63
1_555
hydrog
WATSON-CRICK
A
G
51
A
O6
G
51
1_555
A
C
63
A
N4
C
63
1_555
hydrog
WATSON-CRICK
A
U
52
A
N3
U
52
1_555
A
A
62
A
N1
A
62
1_555
hydrog
WATSON-CRICK
A
U
52
A
O4
U
52
1_555
A
A
62
A
N6
A
62
1_555
hydrog
WATSON-CRICK
A
G
53
A
N1
G
53
1_555
A
C
61
A
N3
C
61
1_555
hydrog
WATSON-CRICK
A
G
53
A
N2
G
53
1_555
A
C
61
A
O2
C
61
1_555
hydrog
WATSON-CRICK
A
G
53
A
O6
G
53
1_555
A
C
61
A
N4
C
61
1_555
hydrog
REVERSED HOOGSTEEN
A
5MU
54
A
N3
5MU
54
1_555
A
1MA
58
A
N7
1MA
58
1_555
hydrog
REVERSED HOOGSTEEN
A
5MU
54
A
O2
5MU
54
1_555
A
1MA
58
A
N6
1MA
58
1_555
T-RNA
T-RNA, SINGLE STRAND, LOOPS
6TNA
PDB
1
6TNA
1
76
6TNA
1
76
6TNA
A
1
1
76
BINDING SITE FOR RESIDUE MG A 77
A
MG
77
Software
6
BINDING SITE FOR RESIDUE MG A 78
A
MG
78
Software
7
BINDING SITE FOR RESIDUE MG A 79
A
MG
79
Software
9
BINDING SITE FOR RESIDUE MG A 80
A
MG
80
Software
6
A
G
19
A
G
19
6
1_555
A
HOH
145
F
HOH
6
1_555
A
HOH
146
F
HOH
6
1_555
A
HOH
147
F
HOH
6
1_555
A
HOH
148
F
HOH
6
1_555
A
HOH
149
F
HOH
6
1_555
A
H2U
16
A
H2U
16
7
3_555
A
G
20
A
G
20
7
1_555
A
A
21
A
A
21
7
1_555
A
HOH
150
F
HOH
7
1_555
A
HOH
151
F
HOH
7
1_555
A
HOH
152
F
HOH
7
1_555
A
HOH
153
F
HOH
7
1_555
A
U
8
A
U
8
9
1_555
A
U
12
A
U
12
9
1_555
A
HOH
133
F
HOH
9
1_555
A
HOH
154
F
HOH
9
1_555
A
HOH
155
F
HOH
9
1_555
A
HOH
156
F
HOH
9
1_555
A
HOH
157
F
HOH
9
1_555
A
HOH
158
F
HOH
9
1_555
A
HOH
159
F
HOH
9
1_555
A
YG
37
A
YG
37
6
1_555
A
HOH
160
F
HOH
6
1_555
A
HOH
161
F
HOH
6
1_555
A
HOH
162
F
HOH
6
1_555
A
HOH
163
F
HOH
6
1_555
A
HOH
164
F
HOH
6
1_555
18
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