data_7K3X # _entry.id 7K3X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7K3X pdb_00007k3x 10.2210/pdb7k3x/pdb WWPDB D_1000251833 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-11-10 2 'Structure model' 1 1 2022-06-01 3 'Structure model' 1 2 2022-06-15 4 'Structure model' 1 3 2022-07-06 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' atom_type 6 4 'Structure model' citation 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.year' 7 3 'Structure model' '_citation.pdbx_database_id_PubMed' 8 3 'Structure model' '_citation.title' 9 3 'Structure model' '_citation_author.identifier_ORCID' 10 3 'Structure model' '_citation_author.name' 11 4 'Structure model' '_atom_type.pdbx_N_electrons' 12 4 'Structure model' '_atom_type.pdbx_scat_Z' 13 4 'Structure model' '_citation.journal_volume' 14 4 'Structure model' '_citation.page_first' 15 4 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7K3X _pdbx_database_status.recvd_initial_deposition_date 2020-09-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details '7K3C contains the wild type sequence' _pdbx_database_related.db_id 7K3C _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Murray, K.A.' 1 0000-0003-1969-7701 'Sawaya, M.R.' 2 0000-0003-0874-9043 'Eisenberg, D.S.' 3 0000-0003-2432-5419 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 29 _citation.language ? _citation.page_first 529 _citation.page_last 536 _citation.title 'Identifying amyloid-related diseases by mapping mutations in low-complexity protein domains to pathologies.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-022-00774-y _citation.pdbx_database_id_PubMed 35637421 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Murray, K.A.' 1 ? primary 'Hughes, M.P.' 2 ? primary 'Hu, C.J.' 3 ? primary 'Sawaya, M.R.' 4 ? primary 'Salwinski, L.' 5 ? primary 'Pan, H.' 6 ? primary 'French, S.W.' 7 ? primary 'Seidler, P.M.' 8 ? primary 'Eisenberg, D.S.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'SGMGCIT segment 58-64 from Keratin-8 with G62C mutation' 667.797 1 ? ? ? ? 2 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 1 ? ? ? ? 3 water nat water 18.015 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SGMGCIT _entity_poly.pdbx_seq_one_letter_code_can SGMGCIT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ISOPROPYL ALCOHOL' IPA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 MET n 1 4 GLY n 1 5 CYS n 1 6 ILE n 1 7 THR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 58 58 SER SER A . n A 1 2 GLY 2 59 59 GLY GLY A . n A 1 3 MET 3 60 60 MET MET A . n A 1 4 GLY 4 61 61 GLY GLY A . n A 1 5 CYS 5 62 62 CYS CYS A . n A 1 6 ILE 6 63 63 ILE ILE A . n A 1 7 THR 7 64 64 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IPA 1 101 1 IPA IPA A . C 3 HOH 1 201 2 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? DENZO ? ? program . 1 ? 'data scaling' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? SCALEPACK ? ? program . 2 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk 'Thu Apr 26 13:39:35 2018 (svn 8338) (git 7364, 1318674... )' ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program 2.8.2 3 ? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program 5.8.0266 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 103.330 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7K3X _cell.details ? _cell.formula_units_Z ? _cell.length_a 4.740 _cell.length_a_esd ? _cell.length_b 46.170 _cell.length_b_esd ? _cell.length_c 10.330 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K3X _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7K3X _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.65 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 25.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M sodium citrate tribasic dehydrate, 0.1M HEPES (pH 7.5), 20% v/v 2-propanol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7K3X _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 100.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 472 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.500 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.400 _reflns.pdbx_Rmerge_I_obs 0.192 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 2.040 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.219 _reflns.pdbx_Rpim_I_all 0.102 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 2087 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.700 1.760 ? ? ? ? ? ? 40 71.400 ? ? ? ? 0.947 ? ? ? ? ? ? ? ? 2.600 ? 1.840 ? ? 1.149 0.636 ? 1 1 0.026 ? ? 1.760 1.830 ? ? ? ? ? ? 32 100.000 ? ? ? ? 0.829 ? ? ? ? ? ? ? ? 3.800 ? 1.492 ? ? 0.937 0.433 ? 2 1 0.567 ? ? 1.830 1.910 ? ? ? ? ? ? 51 100.000 ? ? ? ? 0.633 ? ? ? ? ? ? ? ? 3.800 ? 1.629 ? ? 0.739 0.371 ? 3 1 0.408 ? ? 1.910 2.020 ? ? ? ? ? ? 46 88.500 ? ? ? ? 0.338 ? ? ? ? ? ? ? ? 3.700 ? 1.465 ? ? 0.395 0.199 ? 4 1 0.783 ? ? 2.020 2.140 ? ? ? ? ? ? 55 93.200 ? ? ? ? 0.325 ? ? ? ? ? ? ? ? 4.500 ? 2.009 ? ? 0.364 0.161 ? 5 1 0.973 ? ? 2.140 2.310 ? ? ? ? ? ? 51 100.000 ? ? ? ? 0.297 ? ? ? ? ? ? ? ? 6.000 ? 1.639 ? ? 0.328 0.136 ? 6 1 0.972 ? ? 2.310 2.540 ? ? ? ? ? ? 54 98.200 ? ? ? ? 0.241 ? ? ? ? ? ? ? ? 4.800 ? 1.565 ? ? 0.271 0.121 ? 7 1 0.989 ? ? 2.540 2.910 ? ? ? ? ? ? 32 91.400 ? ? ? ? 0.166 ? ? ? ? ? ? ? ? 4.200 ? 1.535 ? ? 0.210 0.124 ? 8 1 0.974 ? ? 2.910 3.660 ? ? ? ? ? ? 55 100.000 ? ? ? ? 0.185 ? ? ? ? ? ? ? ? 5.000 ? 2.722 ? ? 0.208 0.094 ? 9 1 0.980 ? ? 3.660 100.000 ? ? ? ? ? ? 56 94.900 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 4.800 ? 3.441 ? ? 0.139 0.062 ? 10 1 0.976 ? ? # _refine.aniso_B[1][1] -11.407 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -4.262 _refine.aniso_B[2][2] 1.134 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 10.273 _refine.B_iso_max ? _refine.B_iso_mean 22.999 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.931 _refine.correlation_coeff_Fo_to_Fc_free 0.924 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7K3X _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.705 _refine.ls_d_res_low 23.086 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 448 _refine.ls_number_reflns_R_free 45 _refine.ls_number_reflns_R_work 403 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.117 _refine.ls_percent_reflns_R_free 10.045 _refine.ls_R_factor_all 0.247 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2481 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2468 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'ideal beta strand' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.045 _refine.pdbx_overall_ESU_R_Free 0.032 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.917 _refine.overall_SU_ML 0.136 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 44 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 49 _refine_hist.d_res_high 1.705 _refine_hist.d_res_low 23.086 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.014 46 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.061 0.018 50 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.908 1.731 59 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.593 1.646 114 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 9.503 5.000 6 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 17.662 15.000 8 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.070 0.200 7 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 50 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 6 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.083 0.200 1 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.203 0.200 25 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.137 0.200 18 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.077 0.200 28 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.243 0.200 1 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.237 0.200 7 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.332 0.200 20 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 4.788 2.020 27 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 4.858 1.984 26 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 8.142 3.003 28 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 8.003 3.061 29 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 12.934 2.833 19 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 12.609 2.774 20 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 14.861 4.130 26 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 14.583 4.050 27 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 18.747 28.484 33 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 18.717 29.582 34 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.705 1.749 . . . 25 75.7576 . . . . . 0.374 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.749 1.797 . . 3 24 100.0000 . . . 0.625 . 0.342 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.797 1.849 . . 2 26 100.0000 . . . 0.143 . 0.425 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.849 1.905 . . 1 24 100.0000 . . . 0.005 . 0.344 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.905 1.967 . . 3 32 94.5946 . . . 0.172 . 0.235 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.967 2.036 . . 6 27 80.4878 . . . 0.376 . 0.335 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.036 2.112 . . 2 27 100.0000 . . . 0.195 . 0.160 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.112 2.198 . . 2 26 100.0000 . . . 0.094 . 0.247 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.198 2.295 . . 3 22 100.0000 . . . 0.446 . 0.230 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.295 2.405 . . 4 31 100.0000 . . . 0.633 . 0.336 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.405 2.534 . . 7 18 96.1538 . . . 0.415 . 0.216 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.534 2.686 . . 0 13 92.8571 . . . . . 0.358 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.686 2.868 . . 0 15 93.7500 . . . . . 0.301 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.868 3.094 . . 2 23 100.0000 . . . 0.063 . 0.273 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.094 3.383 . . 1 17 100.0000 . . . 0.751 . 0.245 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.383 3.773 . . 4 11 100.0000 . . . 0.130 . 0.141 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.773 4.337 . . 2 17 95.0000 . . . 0.219 . 0.151 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.337 5.265 . . 2 15 100.0000 . . . 0.185 . 0.117 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.265 7.260 . . 0 4 100.0000 . . . . . 0.395 . . . . . . . . . . . 'X-RAY DIFFRACTION' 7.260 23.086 . . 1 6 87.5000 . . . 0.069 . 0.281 . . . . . . . . . . . # _struct.entry_id 7K3X _struct.title 'SGMGCIT segment 58-64 from Keratin-8 with G62C mutation' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7K3X _struct_keywords.text 'amyloid filament, low complexity sequence, cryptogenic liver disease, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7K3X _struct_ref.pdbx_db_accession 7K3X _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7K3X _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 7 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7K3X _struct_ref_seq.db_align_beg 58 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 64 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 58 _struct_ref_seq.pdbx_auth_seq_align_end 64 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 1 2 A,B,C 1 3 A,B,C 1 4 A,B,C 1 5 A,B,C 1 6 A,B,C 1 7 A,B,C 1 8 A,B,C 1 9 A,B,C 1 10 A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -4.7400000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 4.7400000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 1_355 x-2,y,z 1.0000000000 0.0000000000 0.0000000000 -9.4800000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 1_755 x+2,y,z 1.0000000000 0.0000000000 0.0000000000 9.4800000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 -2.3816771651 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905 7 'crystal symmetry operation' 1_456 x-1,y,z+1 1.0000000000 0.0000000000 0.0000000000 -7.1216771651 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905 8 'crystal symmetry operation' 1_656 x+1,y,z+1 1.0000000000 0.0000000000 0.0000000000 2.3583228349 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905 9 'crystal symmetry operation' 1_356 x-2,y,z+1 1.0000000000 0.0000000000 0.0000000000 -11.8616771651 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905 10 'crystal symmetry operation' 1_756 x+2,y,z+1 1.0000000000 0.0000000000 0.0000000000 7.0983228349 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905 # _pdbx_phasing_MR.entry_id 7K3X _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.710 _pdbx_phasing_MR.d_res_low_rotation 23.090 _pdbx_phasing_MR.d_res_high_translation 1.710 _pdbx_phasing_MR.d_res_low_translation 23.090 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # _pdbx_entry_details.entry_id 7K3X _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CYS N N N N 1 CYS CA C N R 2 CYS C C N N 3 CYS O O N N 4 CYS CB C N N 5 CYS SG S N N 6 CYS OXT O N N 7 CYS H H N N 8 CYS H2 H N N 9 CYS HA H N N 10 CYS HB2 H N N 11 CYS HB3 H N N 12 CYS HG H N N 13 CYS HXT H N N 14 GLY N N N N 15 GLY CA C N N 16 GLY C C N N 17 GLY O O N N 18 GLY OXT O N N 19 GLY H H N N 20 GLY H2 H N N 21 GLY HA2 H N N 22 GLY HA3 H N N 23 GLY HXT H N N 24 HOH O O N N 25 HOH H1 H N N 26 HOH H2 H N N 27 ILE N N N N 28 ILE CA C N S 29 ILE C C N N 30 ILE O O N N 31 ILE CB C N S 32 ILE CG1 C N N 33 ILE CG2 C N N 34 ILE CD1 C N N 35 ILE OXT O N N 36 ILE H H N N 37 ILE H2 H N N 38 ILE HA H N N 39 ILE HB H N N 40 ILE HG12 H N N 41 ILE HG13 H N N 42 ILE HG21 H N N 43 ILE HG22 H N N 44 ILE HG23 H N N 45 ILE HD11 H N N 46 ILE HD12 H N N 47 ILE HD13 H N N 48 ILE HXT H N N 49 IPA C1 C N N 50 IPA C2 C N N 51 IPA C3 C N N 52 IPA O2 O N N 53 IPA H11 H N N 54 IPA H12 H N N 55 IPA H13 H N N 56 IPA H2 H N N 57 IPA H31 H N N 58 IPA H32 H N N 59 IPA H33 H N N 60 IPA HO2 H N N 61 MET N N N N 62 MET CA C N S 63 MET C C N N 64 MET O O N N 65 MET CB C N N 66 MET CG C N N 67 MET SD S N N 68 MET CE C N N 69 MET OXT O N N 70 MET H H N N 71 MET H2 H N N 72 MET HA H N N 73 MET HB2 H N N 74 MET HB3 H N N 75 MET HG2 H N N 76 MET HG3 H N N 77 MET HE1 H N N 78 MET HE2 H N N 79 MET HE3 H N N 80 MET HXT H N N 81 SER N N N N 82 SER CA C N S 83 SER C C N N 84 SER O O N N 85 SER CB C N N 86 SER OG O N N 87 SER OXT O N N 88 SER H H N N 89 SER H2 H N N 90 SER HA H N N 91 SER HB2 H N N 92 SER HB3 H N N 93 SER HG H N N 94 SER HXT H N N 95 THR N N N N 96 THR CA C N S 97 THR C C N N 98 THR O O N N 99 THR CB C N R 100 THR OG1 O N N 101 THR CG2 C N N 102 THR OXT O N N 103 THR H H N N 104 THR H2 H N N 105 THR HA H N N 106 THR HB H N N 107 THR HG1 H N N 108 THR HG21 H N N 109 THR HG22 H N N 110 THR HG23 H N N 111 THR HXT H N N 112 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CYS N CA sing N N 1 CYS N H sing N N 2 CYS N H2 sing N N 3 CYS CA C sing N N 4 CYS CA CB sing N N 5 CYS CA HA sing N N 6 CYS C O doub N N 7 CYS C OXT sing N N 8 CYS CB SG sing N N 9 CYS CB HB2 sing N N 10 CYS CB HB3 sing N N 11 CYS SG HG sing N N 12 CYS OXT HXT sing N N 13 GLY N CA sing N N 14 GLY N H sing N N 15 GLY N H2 sing N N 16 GLY CA C sing N N 17 GLY CA HA2 sing N N 18 GLY CA HA3 sing N N 19 GLY C O doub N N 20 GLY C OXT sing N N 21 GLY OXT HXT sing N N 22 HOH O H1 sing N N 23 HOH O H2 sing N N 24 ILE N CA sing N N 25 ILE N H sing N N 26 ILE N H2 sing N N 27 ILE CA C sing N N 28 ILE CA CB sing N N 29 ILE CA HA sing N N 30 ILE C O doub N N 31 ILE C OXT sing N N 32 ILE CB CG1 sing N N 33 ILE CB CG2 sing N N 34 ILE CB HB sing N N 35 ILE CG1 CD1 sing N N 36 ILE CG1 HG12 sing N N 37 ILE CG1 HG13 sing N N 38 ILE CG2 HG21 sing N N 39 ILE CG2 HG22 sing N N 40 ILE CG2 HG23 sing N N 41 ILE CD1 HD11 sing N N 42 ILE CD1 HD12 sing N N 43 ILE CD1 HD13 sing N N 44 ILE OXT HXT sing N N 45 IPA C1 C2 sing N N 46 IPA C1 H11 sing N N 47 IPA C1 H12 sing N N 48 IPA C1 H13 sing N N 49 IPA C2 C3 sing N N 50 IPA C2 O2 sing N N 51 IPA C2 H2 sing N N 52 IPA C3 H31 sing N N 53 IPA C3 H32 sing N N 54 IPA C3 H33 sing N N 55 IPA O2 HO2 sing N N 56 MET N CA sing N N 57 MET N H sing N N 58 MET N H2 sing N N 59 MET CA C sing N N 60 MET CA CB sing N N 61 MET CA HA sing N N 62 MET C O doub N N 63 MET C OXT sing N N 64 MET CB CG sing N N 65 MET CB HB2 sing N N 66 MET CB HB3 sing N N 67 MET CG SD sing N N 68 MET CG HG2 sing N N 69 MET CG HG3 sing N N 70 MET SD CE sing N N 71 MET CE HE1 sing N N 72 MET CE HE2 sing N N 73 MET CE HE3 sing N N 74 MET OXT HXT sing N N 75 SER N CA sing N N 76 SER N H sing N N 77 SER N H2 sing N N 78 SER CA C sing N N 79 SER CA CB sing N N 80 SER CA HA sing N N 81 SER C O doub N N 82 SER C OXT sing N N 83 SER CB OG sing N N 84 SER CB HB2 sing N N 85 SER CB HB3 sing N N 86 SER OG HG sing N N 87 SER OXT HXT sing N N 88 THR N CA sing N N 89 THR N H sing N N 90 THR N H2 sing N N 91 THR CA C sing N N 92 THR CA CB sing N N 93 THR CA HA sing N N 94 THR C O doub N N 95 THR C OXT sing N N 96 THR CB OG1 sing N N 97 THR CB CG2 sing N N 98 THR CB HB sing N N 99 THR OG1 HG1 sing N N 100 THR CG2 HG21 sing N N 101 THR CG2 HG22 sing N N 102 THR CG2 HG23 sing N N 103 THR OXT HXT sing N N 104 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'P30 GM124165' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'ideal beta strand' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction _pdbx_reflns_twin.type _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id 1 'H, K, L' 0.5277 pseudo-merohedral 1 1 2 '-H, -K, H+L' 0.4723 pseudo-merohedral 2 2 # _atom_sites.entry_id 7K3X _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.210970 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.049988 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021659 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.099486 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . SER A 1 1 ? -1.708 9.261 -5.821 1.000 51.845 0 58 SER A N 1 ATOM 2 C CA . SER A 1 1 ? -1.721 8.053 -6.680 1.000 43.035 0 58 SER A CA 1 ATOM 3 C C . SER A 1 1 ? -0.948 6.940 -5.969 1.000 35.530 0 58 SER A C 1 ATOM 4 O O . SER A 1 1 ? 0.124 6.513 -6.483 1.000 38.522 0 58 SER A O 1 ATOM 5 C CB . SER A 1 1 ? -1.188 8.373 -8.054 1.000 45.126 0 58 SER A CB 1 ATOM 6 O OG . SER A 1 1 ? -2.131 9.156 -8.779 1.000 48.025 0 58 SER A OG 1 ATOM 7 N N . GLY A 1 2 ? -1.485 6.511 -4.820 1.000 24.742 0 59 GLY A N 1 ATOM 8 C CA . GLY A 1 2 ? -0.844 5.565 -3.891 1.000 19.871 0 59 GLY A CA 1 ATOM 9 C C . GLY A 1 2 ? -1.625 4.269 -3.751 1.000 17.639 0 59 GLY A C 1 ATOM 10 O O . GLY A 1 2 ? -2.869 4.291 -3.868 1.000 13.920 0 59 GLY A O 1 ATOM 11 N N . MET A 1 3 ? -0.939 3.153 -3.484 1.000 18.301 0 60 MET A N 1 ATOM 12 C CA . MET A 1 3 ? -1.623 1.879 -3.125 1.000 16.108 0 60 MET A CA 1 ATOM 13 C C . MET A 1 3 ? -0.826 1.113 -2.085 1.000 12.510 0 60 MET A C 1 ATOM 14 O O . MET A 1 3 ? 0.440 1.055 -2.149 1.000 12.439 0 60 MET A O 1 ATOM 15 C CB . MET A 1 3 ? -1.871 0.975 -4.334 1.000 20.040 0 60 MET A CB 1 ATOM 16 C CG . MET A 1 3 ? -0.896 1.156 -5.429 1.000 20.465 0 60 MET A CG 1 ATOM 17 S SD . MET A 1 3 ? -1.458 0.153 -6.792 1.000 34.850 0 60 MET A SD 1 ATOM 18 C CE . MET A 1 3 ? -0.503 -1.320 -6.465 1.000 27.429 0 60 MET A CE 1 ATOM 19 N N . GLY A 1 4 ? -1.570 0.572 -1.134 1.000 12.601 0 61 GLY A N 1 ATOM 20 C CA . GLY A 1 4 ? -1.010 -0.146 0.024 1.000 12.960 0 61 GLY A CA 1 ATOM 21 C C . GLY A 1 4 ? -1.654 -1.496 0.214 1.000 8.888 0 61 GLY A C 1 ATOM 22 O O . GLY A 1 4 ? -2.903 -1.576 0.188 1.000 7.438 0 61 GLY A O 1 ATOM 23 N N . CYS A 1 5 ? -0.843 -2.519 0.434 1.000 13.148 0 62 CYS A N 1 ATOM 24 C CA . CYS A 1 5 ? -1.306 -3.898 0.749 1.000 20.753 0 62 CYS A CA 1 ATOM 25 C C . CYS A 1 5 ? -0.632 -4.404 2.022 1.000 15.301 0 62 CYS A C 1 ATOM 26 O O . CYS A 1 5 ? 0.623 -4.541 2.060 1.000 13.129 0 62 CYS A O 1 ATOM 27 C CB . CYS A 1 5 ? -1.017 -4.871 -0.389 1.000 24.190 0 62 CYS A CB 1 ATOM 28 S SG . CYS A 1 5 ? -1.683 -6.525 -0.061 1.000 60.838 0 62 CYS A SG 1 ATOM 29 N N . ILE A 1 6 ? -1.433 -4.677 3.036 1.000 14.740 0 63 ILE A N 1 ATOM 30 C CA . ILE A 1 6 ? -0.941 -5.384 4.247 1.000 15.923 0 63 ILE A CA 1 ATOM 31 C C . ILE A 1 6 ? -1.467 -6.822 4.158 1.000 15.595 0 63 ILE A C 1 ATOM 32 O O . ILE A 1 6 ? -2.674 -7.035 4.359 1.000 17.976 0 63 ILE A O 1 ATOM 33 C CB . ILE A 1 6 ? -1.341 -4.609 5.517 1.000 15.257 0 63 ILE A CB 1 ATOM 34 C CG1 . ILE A 1 6 ? -0.723 -3.204 5.554 1.000 19.312 0 63 ILE A CG1 1 ATOM 35 C CG2 . ILE A 1 6 ? -0.962 -5.399 6.753 1.000 20.714 0 63 ILE A CG2 1 ATOM 36 C CD1 . ILE A 1 6 ? -1.070 -2.389 6.790 1.000 19.569 0 63 ILE A CD1 1 ATOM 37 N N . THR A 1 7 ? -0.617 -7.768 3.756 1.000 22.477 0 64 THR A N 1 ATOM 38 C CA . THR A 1 7 ? -1.042 -9.119 3.294 1.000 32.875 0 64 THR A CA 1 ATOM 39 C C . THR A 1 7 ? -0.903 -10.139 4.412 1.000 30.762 0 64 THR A C 1 ATOM 40 O O . THR A 1 7 ? 0.179 -10.684 4.531 1.000 29.267 0 64 THR A O 1 ATOM 41 C CB . THR A 1 7 ? -0.212 -9.614 2.111 1.000 42.802 0 64 THR A CB 1 ATOM 42 O OG1 . THR A 1 7 ? -0.242 -8.583 1.122 1.000 73.724 0 64 THR A OG1 1 ATOM 43 C CG2 . THR A 1 7 ? -0.740 -10.913 1.540 1.000 51.289 0 64 THR A CG2 1 ATOM 44 O OXT . THR A 1 7 ? -1.841 -10.409 5.149 1.000 49.341 0 64 THR A OXT 1 HETATM 45 C C1 . IPA B 2 . ? 0.578 3.659 -9.746 0.500 13.466 0 101 IPA A C1 1 HETATM 46 C C2 . IPA B 2 . ? 1.889 3.094 -9.313 0.500 13.303 0 101 IPA A C2 1 HETATM 47 C C3 . IPA B 2 . ? 3.119 3.687 -9.918 0.500 13.023 0 101 IPA A C3 1 HETATM 48 O O2 . IPA B 2 . ? 1.965 3.174 -7.894 0.500 17.086 0 101 IPA A O2 1 HETATM 49 O O . HOH C 3 . ? 0.013 10.491 -10.165 1.000 28.181 0 201 HOH A O 1 #