data_7T3H # _entry.id 7T3H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7T3H pdb_00007t3h 10.2210/pdb7t3h/pdb WWPDB D_1000261546 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7T3H _pdbx_database_status.recvd_initial_deposition_date 2021-12-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yoo, B.-K.' 1 ? 'Kaiser, J.T.' 2 ? 'Rees, D.C.' 3 ? 'Miller, R.D.' 4 ? 'Iinishi, A.' 5 ? 'Lewis, K.' 6 ? 'Bowman, S.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Microbiol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2058-5276 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 1661 _citation.page_last 1672 _citation.title 'Computational identification of a systemic antibiotic for gram-negative bacteria.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41564-022-01227-4 _citation.pdbx_database_id_PubMed 36163500 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miller, R.D.' 1 0000-0002-0723-8658 primary 'Iinishi, A.' 2 ? primary 'Modaresi, S.M.' 3 0000-0001-9747-9748 primary 'Yoo, B.K.' 4 ? primary 'Curtis, T.D.' 5 ? primary 'Lariviere, P.J.' 6 0000-0002-8427-3879 primary 'Liang, L.' 7 ? primary 'Son, S.' 8 ? primary 'Nicolau, S.' 9 ? primary 'Bargabos, R.' 10 ? primary 'Morrissette, M.' 11 ? primary 'Gates, M.F.' 12 ? primary 'Pitt, N.' 13 ? primary 'Jakob, R.P.' 14 ? primary 'Rath, P.' 15 ? primary 'Maier, T.' 16 0000-0002-7459-1363 primary 'Malyutin, A.G.' 17 ? primary 'Kaiser, J.T.' 18 ? primary 'Niles, S.' 19 ? primary 'Karavas, B.' 20 0000-0002-6258-414X primary 'Ghiglieri, M.' 21 ? primary 'Bowman, S.E.J.' 22 0000-0002-7426-7328 primary 'Rees, D.C.' 23 ? primary 'Hiller, S.' 24 0000-0002-6709-4684 primary 'Lewis, K.' 25 0000-0002-1335-9982 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd 0.000 _cell.angle_beta 112.000 _cell.angle_beta_esd 0.030 _cell.angle_gamma 90.000 _cell.angle_gamma_esd 0.000 _cell.entry_id 7T3H _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.230 _cell.length_a_esd 0.008 _cell.length_b 9.730 _cell.length_b_esd 0.002 _cell.length_c 19.070 _cell.length_c_esd 0.004 _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T3H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat TRP-ASN-SER-ASN-VAL-HIS-SER-TYR-ARG-PHE 1311.405 1 ? ? ? ? 2 water nat water 18.015 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code WNSNVHSYRF _entity_poly.pdbx_seq_one_letter_code_can WNSNVHSYRF _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TRP n 1 2 ASN n 1 3 SER n 1 4 ASN n 1 5 VAL n 1 6 HIS n 1 7 SER n 1 8 TYR n 1 9 ARG n 1 10 PHE n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 10 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Photorhabdus australis' _entity_src_nat.pdbx_ncbi_taxonomy_id 286156 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7T3H _struct_ref.pdbx_db_accession 7T3H _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7T3H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7T3H _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7T3H _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.method_details ? # _reflns.B_iso_Wilson_estimate 11.208 _reflns.entry_id 7T3H _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.9 _reflns.d_resolution_low ? _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3490 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 17.162 _reflns.pdbx_Rmerge_I_obs 0.205 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.849 _reflns.pdbx_scaling_rejects 65 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.211 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 59896 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.990 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.050 1.080 ? 3.160 ? 4867 265 ? 260 98.100 ? ? ? ? 0.672 ? ? ? ? ? ? ? ? 18.719 ? ? ? ? 0.689 ? ? 1 1 0.920 ? ? ? ? ? ? ? ? ? ? 1.080 1.110 ? 4.040 ? 4561 246 ? 244 99.200 ? ? ? ? 0.478 ? ? ? ? ? ? ? ? 18.693 ? ? ? ? 0.491 ? ? 2 1 0.970 ? ? ? ? ? ? ? ? ? ? 1.110 1.140 ? 4.720 ? 4303 246 ? 243 98.800 ? ? ? ? 0.439 ? ? ? ? ? ? ? ? 17.708 ? ? ? ? 0.451 ? ? 3 1 0.976 ? ? ? ? ? ? ? ? ? ? 1.140 1.170 ? 5.210 ? 4308 232 ? 229 98.700 ? ? ? ? 0.414 ? ? ? ? ? ? ? ? 18.812 ? ? ? ? 0.424 ? ? 4 1 0.982 ? ? ? ? ? ? ? ? ? ? 1.170 1.210 ? 5.530 ? 4494 248 ? 248 100.000 ? ? ? ? 0.410 ? ? ? ? ? ? ? ? 18.121 ? ? ? ? 0.421 ? ? 5 1 0.974 ? ? ? ? ? ? ? ? ? ? 1.210 1.260 ? 6.170 ? 3826 213 ? 210 98.600 ? ? ? ? 0.398 ? ? ? ? ? ? ? ? 18.219 ? ? ? ? 0.408 ? ? 6 1 0.977 ? ? ? ? ? ? ? ? ? ? 1.260 1.300 ? 6.130 ? 3514 204 ? 201 98.500 ? ? ? ? 0.359 ? ? ? ? ? ? ? ? 17.483 ? ? ? ? 0.369 ? ? 7 1 0.984 ? ? ? ? ? ? ? ? ? ? 1.300 1.360 ? 6.620 ? 4026 229 ? 222 96.900 ? ? ? ? 0.376 ? ? ? ? ? ? ? ? 18.135 ? ? ? ? 0.386 ? ? 8 1 0.983 ? ? ? ? ? ? ? ? ? ? 1.360 1.420 ? 7.870 ? 3469 194 ? 191 98.500 ? ? ? ? 0.355 ? ? ? ? ? ? ? ? 18.162 ? ? ? ? 0.365 ? ? 9 1 0.970 ? ? ? ? ? ? ? ? ? ? 1.420 1.490 ? 8.190 ? 3015 182 ? 178 97.800 ? ? ? ? 0.306 ? ? ? ? ? ? ? ? 16.938 ? ? ? ? 0.315 ? ? 10 1 0.981 ? ? ? ? ? ? ? ? ? ? 1.490 1.570 ? 9.060 ? 3112 186 ? 186 100.000 ? ? ? ? 0.285 ? ? ? ? ? ? ? ? 16.731 ? ? ? ? 0.294 ? ? 11 1 0.985 ? ? ? ? ? ? ? ? ? ? 1.570 1.660 ? 10.630 ? 3142 188 ? 185 98.400 ? ? ? ? 0.268 ? ? ? ? ? ? ? ? 16.984 ? ? ? ? 0.276 ? ? 12 1 0.976 ? ? ? ? ? ? ? ? ? ? 1.660 1.770 ? 11.280 ? 2442 158 ? 155 98.100 ? ? ? ? 0.228 ? ? ? ? ? ? ? ? 15.755 ? ? ? ? 0.235 ? ? 13 1 0.994 ? ? ? ? ? ? ? ? ? ? 1.770 1.920 ? 13.370 ? 2561 161 ? 157 97.500 ? ? ? ? 0.199 ? ? ? ? ? ? ? ? 16.312 ? ? ? ? 0.205 ? ? 14 1 0.987 ? ? ? ? ? ? ? ? ? ? 1.920 2.100 ? 13.990 ? 2042 135 ? 134 99.300 ? ? ? ? 0.177 ? ? ? ? ? ? ? ? 15.239 ? ? ? ? 0.183 ? ? 15 1 0.979 ? ? ? ? ? ? ? ? ? ? 2.100 2.350 ? 14.220 ? 1877 132 ? 125 94.700 ? ? ? ? 0.181 ? ? ? ? ? ? ? ? 15.016 ? ? ? ? 0.187 ? ? 16 1 0.976 ? ? ? ? ? ? ? ? ? ? 2.350 2.710 ? 15.190 ? 1639 118 ? 115 97.500 ? ? ? ? 0.158 ? ? ? ? ? ? ? ? 14.252 ? ? ? ? 0.164 ? ? 17 1 0.991 ? ? ? ? ? ? ? ? ? ? 2.710 3.320 ? 16.280 ? 1467 105 ? 100 95.200 ? ? ? ? 0.142 ? ? ? ? ? ? ? ? 14.670 ? ? ? ? 0.146 ? ? 18 1 0.993 ? ? ? ? ? ? ? ? ? ? 3.320 4.700 ? 16.410 ? 945 77 ? 72 93.500 ? ? ? ? 0.138 ? ? ? ? ? ? ? ? 13.125 ? ? ? ? 0.143 ? ? 19 1 0.986 ? ? ? ? ? ? ? ? ? ? 4.700 ? ? 12.740 ? 286 50 ? 35 70.000 ? ? ? ? 0.161 ? ? ? ? ? ? ? ? 8.171 ? ? ? ? 0.170 ? ? 20 1 0.977 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 64.250 _refine.B_iso_mean 13.9631 _refine.B_iso_min 5.550 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ;Data was merged from 19 crystals of varying resolution limits up to 0.9A. Overall resolution limit was determined to be 1.05A and applied in the refinement program. ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7T3H _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.05 _refine.ls_d_res_low 9.5 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all 72645 _refine.ls_number_reflns_obs 4731 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 89.6 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all 0.1545 _refine.ls_R_factor_obs 0.1294 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _struct.entry_id 7T3H _struct.title 'MicroED structure of Dynobactin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7T3H _struct_keywords.text 'antibiotics, drug development, natural product, Bam A, MicroED, ANTIBIOTIC' _struct_keywords.pdbx_keywords ANTIBIOTIC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A TRP 1 CH2 ? ? ? 1_555 A ASN 4 CB ? ? A TRP 1 A ASN 4 1_555 ? ? ? ? ? ? ? 1.517 ? ? covale2 covale none ? A HIS 6 NE2 ? ? ? 1_555 A TYR 8 CB ? ? A HIS 6 A TYR 8 1_555 ? ? ? ? ? ? ? 1.484 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 7T3H _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.023680 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009568 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.102775 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.056557 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . TRP A 1 1 ? 25.481 2.457 2.118 1.00 18.79 ? 1 TRP A N 1 ATOM 2 C CA . TRP A 1 1 ? 24.430 3.163 2.767 1.00 12.04 ? 1 TRP A CA 1 ATOM 3 C C . TRP A 1 1 ? 23.181 2.666 2.293 1.00 13.10 ? 1 TRP A C 1 ATOM 4 O O . TRP A 1 1 ? 23.078 2.234 1.114 1.00 18.46 ? 1 TRP A O 1 ATOM 5 C CB . TRP A 1 1 ? 24.417 4.636 2.451 1.00 11.97 ? 1 TRP A CB 1 ATOM 6 C CG . TRP A 1 1 ? 23.491 5.528 3.229 1.00 10.70 ? 1 TRP A CG 1 ATOM 7 C CD1 . TRP A 1 1 ? 23.666 6.118 4.391 1.00 12.05 ? 1 TRP A CD1 1 ATOM 8 C CD2 . TRP A 1 1 ? 22.056 5.630 2.961 1.00 9.57 ? 1 TRP A CD2 1 ATOM 9 N NE1 . TRP A 1 1 ? 22.423 6.699 4.759 1.00 11.69 ? 1 TRP A NE1 1 ATOM 10 C CE2 . TRP A 1 1 ? 21.468 6.447 4.091 1.00 9.31 ? 1 TRP A CE2 1 ATOM 11 C CE3 . TRP A 1 1 ? 21.167 5.269 2.023 1.00 11.98 ? 1 TRP A CE3 1 ATOM 12 C CZ2 . TRP A 1 1 ? 20.289 6.777 4.111 1.00 9.03 ? 1 TRP A CZ2 1 ATOM 13 C CZ3 . TRP A 1 1 ? 19.856 5.645 2.045 1.00 12.73 ? 1 TRP A CZ3 1 ATOM 14 C CH2 . TRP A 1 1 ? 19.381 6.453 3.232 1.00 11.72 ? 1 TRP A CH2 1 ATOM 15 H H1 . TRP A 1 1 ? 25.561 2.748 1.281 1.00 22.54 ? 1 TRP A H1 1 ATOM 16 H H2 . TRP A 1 1 ? 25.294 1.587 2.113 1.00 22.54 ? 1 TRP A H2 1 ATOM 17 H H3 . TRP A 1 1 ? 26.244 2.594 2.555 1.00 22.54 ? 1 TRP A H3 1 ATOM 18 H HA . TRP A 1 1 ? 24.492 3.033 3.736 1.00 14.45 ? 1 TRP A HA 1 ATOM 19 H HB2 . TRP A 1 1 ? 25.319 4.972 2.571 1.00 14.37 ? 1 TRP A HB2 1 ATOM 20 H HB3 . TRP A 1 1 ? 24.199 4.734 1.510 1.00 14.37 ? 1 TRP A HB3 1 ATOM 21 H HD1 . TRP A 1 1 ? 24.456 6.148 4.880 1.00 14.46 ? 1 TRP A HD1 1 ATOM 22 H HE1 . TRP A 1 1 ? 22.361 7.217 5.443 1.00 14.03 ? 1 TRP A HE1 1 ATOM 23 H HE3 . TRP A 1 1 ? 21.460 4.734 1.321 1.00 14.38 ? 1 TRP A HE3 1 ATOM 24 H HZ2 . TRP A 1 1 ? 20.014 7.311 4.822 1.00 10.84 ? 1 TRP A HZ2 1 ATOM 25 H HZ3 . TRP A 1 1 ? 19.275 5.413 1.356 1.00 15.28 ? 1 TRP A HZ3 1 ATOM 26 N N . ASN A 1 2 ? 22.195 2.424 3.131 1.00 13.57 ? 2 ASN A N 1 ATOM 27 C CA . ASN A 1 2 ? 20.935 1.646 2.746 1.00 19.61 ? 2 ASN A CA 1 ATOM 28 C C . ASN A 1 2 ? 19.803 2.337 3.811 1.00 10.70 ? 2 ASN A C 1 ATOM 29 O O . ASN A 1 2 ? 20.029 2.938 4.802 1.00 16.52 ? 2 ASN A O 1 ATOM 30 C CB . ASN A 1 2 ? 21.064 0.140 3.080 1.00 25.26 ? 2 ASN A CB 1 ATOM 31 C CG . ASN A 1 2 ? 22.061 -0.590 2.267 1.00 25.37 ? 2 ASN A CG 1 ATOM 32 O OD1 . ASN A 1 2 ? 23.111 -0.617 2.867 1.00 25.44 ? 2 ASN A OD1 1 ATOM 33 N ND2 . ASN A 1 2 ? 21.938 -1.062 1.020 1.00 25.71 ? 2 ASN A ND2 1 ATOM 34 H H . ASN A 1 2 ? 22.263 2.717 3.936 1.00 16.28 ? 2 ASN A H 1 ATOM 35 H HA . ASN A 1 2 ? 20.689 1.792 1.808 1.00 23.53 ? 2 ASN A HA 1 ATOM 36 H HB2 . ASN A 1 2 ? 21.302 0.049 4.016 1.00 30.31 ? 2 ASN A HB2 1 ATOM 37 H HB3 . ASN A 1 2 ? 20.198 -0.280 2.956 1.00 30.31 ? 2 ASN A HB3 1 ATOM 38 H HD21 . ASN A 1 2 ? 22.620 -1.399 0.619 1.00 30.86 ? 2 ASN A HD21 1 ATOM 39 H HD22 . ASN A 1 2 ? 21.177 -1.029 0.620 1.00 30.86 ? 2 ASN A HD22 1 ATOM 40 N N . SER A 1 3 ? 18.531 2.025 3.451 1.00 10.23 ? 3 SER A N 1 ATOM 41 C CA . SER A 1 3 ? 17.450 2.098 4.415 1.00 11.59 ? 3 SER A CA 1 ATOM 42 C C . SER A 1 3 ? 17.135 3.453 4.938 1.00 10.30 ? 3 SER A C 1 ATOM 43 O O . SER A 1 3 ? 16.924 3.698 6.125 1.00 13.71 ? 3 SER A O 1 ATOM 44 C CB . SER A 1 3 ? 17.628 1.120 5.599 1.00 14.45 ? 3 SER A CB 1 ATOM 45 O OG . SER A 1 3 ? 17.976 -0.166 5.242 1.00 18.80 ? 3 SER A OG 1 ATOM 46 H H . SER A 1 3 ? 18.365 1.781 2.643 1.00 12.28 ? 3 SER A H 1 ATOM 47 H HA . SER A 1 3 ? 16.647 1.800 3.940 1.00 13.91 ? 3 SER A HA 1 ATOM 48 H HB2 . SER A 1 3 ? 18.311 1.472 6.191 1.00 17.34 ? 3 SER A HB2 1 ATOM 49 H HB3 . SER A 1 3 ? 16.797 1.087 6.099 1.00 17.34 ? 3 SER A HB3 1 ATOM 50 H HG . SER A 1 3 ? 17.311 -0.638 5.257 1.00 28.20 ? 3 SER A HG 1 ATOM 51 N N . ASN A 1 4 ? 17.232 4.479 3.952 1.00 9.81 ? 4 ASN A N 1 ATOM 52 C CA . ASN A 1 4 ? 17.155 5.879 4.305 1.00 14.66 ? 4 ASN A CA 1 ATOM 53 C C . ASN A 1 4 ? 15.707 6.350 4.602 1.00 14.55 ? 4 ASN A C 1 ATOM 54 O O . ASN A 1 4 ? 15.631 7.434 5.069 1.00 37.17 ? 4 ASN A O 1 ATOM 55 C CB . ASN A 1 4 ? 17.889 6.728 3.255 1.00 13.77 ? 4 ASN A CB 1 ATOM 56 C CG . ASN A 1 4 ? 17.082 6.785 1.923 1.00 16.11 ? 4 ASN A CG 1 ATOM 57 O OD1 . ASN A 1 4 ? 16.864 5.713 1.375 1.00 15.84 ? 4 ASN A OD1 1 ATOM 58 N ND2 . ASN A 1 4 ? 16.643 7.926 1.322 1.00 53.54 ? 4 ASN A ND2 1 ATOM 59 H H . ASN A 1 4 ? 17.340 4.259 3.128 1.00 11.77 ? 4 ASN A H 1 ATOM 60 H HA . ASN A 1 4 ? 17.656 5.981 5.142 1.00 17.59 ? 4 ASN A HA 1 ATOM 61 H HB2 . ASN A 1 4 ? 17.825 7.641 3.606 1.00 16.52 ? 4 ASN A HB2 1 ATOM 62 H HD21 . ASN A 1 4 ? 16.224 7.884 0.572 1.00 64.25 ? 4 ASN A HD21 1 ATOM 63 H HD22 . ASN A 1 4 ? 16.787 8.690 1.691 1.00 64.25 ? 4 ASN A HD22 1 ATOM 64 N N . VAL A 1 5 ? 14.692 5.647 4.198 1.00 7.53 ? 5 VAL A N 1 ATOM 65 C CA . VAL A 1 5 ? 13.371 6.132 4.326 1.00 7.37 ? 5 VAL A CA 1 ATOM 66 C C . VAL A 1 5 ? 12.694 5.454 5.569 1.00 6.61 ? 5 VAL A C 1 ATOM 67 O O . VAL A 1 5 ? 12.665 4.227 5.622 1.00 7.67 ? 5 VAL A O 1 ATOM 68 C CB . VAL A 1 5 ? 12.489 5.896 3.037 1.00 7.98 ? 5 VAL A CB 1 ATOM 69 C CG1 . VAL A 1 5 ? 11.121 6.418 3.230 1.00 11.60 ? 5 VAL A CG1 1 ATOM 70 C CG2 . VAL A 1 5 ? 13.191 6.545 1.780 1.00 9.56 ? 5 VAL A CG2 1 ATOM 71 H H . VAL A 1 5 ? 14.826 4.874 3.846 1.00 9.04 ? 5 VAL A H 1 ATOM 72 H HA . VAL A 1 5 ? 13.416 7.096 4.493 1.00 8.84 ? 5 VAL A HA 1 ATOM 73 H HB . VAL A 1 5 ? 12.426 4.930 2.885 1.00 9.57 ? 5 VAL A HB 1 ATOM 74 H HG11 . VAL A 1 5 ? 10.631 5.826 3.804 1.00 17.40 ? 5 VAL A HG11 1 ATOM 75 H HG12 . VAL A 1 5 ? 10.679 6.478 2.380 1.00 17.40 ? 5 VAL A HG12 1 ATOM 76 H HG13 . VAL A 1 5 ? 11.165 7.289 3.630 1.00 17.40 ? 5 VAL A HG13 1 ATOM 77 H HG21 . VAL A 1 5 ? 13.300 7.487 1.926 1.00 14.34 ? 5 VAL A HG21 1 ATOM 78 H HG22 . VAL A 1 5 ? 12.647 6.402 1.002 1.00 14.34 ? 5 VAL A HG22 1 ATOM 79 H HG23 . VAL A 1 5 ? 14.051 6.139 1.649 1.00 14.34 ? 5 VAL A HG23 1 ATOM 80 N N . HIS A 1 6 ? 12.113 6.281 6.463 1.00 7.56 ? 6 HIS A N 1 ATOM 81 C CA . HIS A 1 6 ? 11.148 5.795 7.397 1.00 7.45 ? 6 HIS A CA 1 ATOM 82 C C . HIS A 1 6 ? 9.770 6.471 7.085 1.00 6.23 ? 6 HIS A C 1 ATOM 83 O O . HIS A 1 6 ? 9.609 7.725 7.107 1.00 7.12 ? 6 HIS A O 1 ATOM 84 C CB . HIS A 1 6 ? 11.485 6.078 8.848 1.00 7.97 ? 6 HIS A CB 1 ATOM 85 C CG . HIS A 1 6 ? 10.319 5.735 9.784 1.00 7.82 ? 6 HIS A CG 1 ATOM 86 N ND1 . HIS A 1 6 ? 10.134 4.467 10.309 1.00 8.37 ? 6 HIS A ND1 1 ATOM 87 C CD2 . HIS A 1 6 ? 9.282 6.539 10.137 1.00 6.79 ? 6 HIS A CD2 1 ATOM 88 C CE1 . HIS A 1 6 ? 8.981 4.563 10.937 1.00 7.71 ? 6 HIS A CE1 1 ATOM 89 N NE2 . HIS A 1 6 ? 8.380 5.740 10.846 1.00 8.10 ? 6 HIS A NE2 1 ATOM 90 H H . HIS A 1 6 ? 12.326 7.114 6.470 1.00 9.07 ? 6 HIS A H 1 ATOM 91 H HA . HIS A 1 6 ? 11.057 4.827 7.279 1.00 8.93 ? 6 HIS A HA 1 ATOM 92 H HB2 . HIS A 1 6 ? 12.263 5.558 9.102 1.00 9.56 ? 6 HIS A HB2 1 ATOM 93 H HB3 . HIS A 1 6 ? 11.709 7.017 8.947 1.00 9.56 ? 6 HIS A HB3 1 ATOM 94 H HD2 . HIS A 1 6 ? 9.190 7.444 9.945 1.00 8.15 ? 6 HIS A HD2 1 ATOM 95 H HE1 . HIS A 1 6 ? 8.614 3.853 11.412 1.00 9.26 ? 6 HIS A HE1 1 ATOM 96 N N . SER A 1 7 ? 8.728 5.641 6.794 1.00 7.13 ? 7 SER A N 1 ATOM 97 C CA . SER A 1 7 ? 7.376 6.072 6.750 1.00 6.76 ? 7 SER A CA 1 ATOM 98 C C . SER A 1 7 ? 6.703 5.466 8.007 1.00 5.55 ? 7 SER A C 1 ATOM 99 O O . SER A 1 7 ? 6.607 4.250 8.100 1.00 6.82 ? 7 SER A O 1 ATOM 100 C CB . SER A 1 7 ? 6.740 5.591 5.480 1.00 8.89 ? 7 SER A CB 1 ATOM 101 O OG . SER A 1 7 ? 5.353 6.080 5.323 1.00 10.51 ? 7 SER A OG 1 ATOM 102 H H . SER A 1 7 ? 8.899 4.815 6.627 1.00 8.55 ? 7 SER A H 1 ATOM 103 H HA . SER A 1 7 ? 7.337 7.050 6.792 1.00 8.11 ? 7 SER A HA 1 ATOM 104 H HB2 . SER A 1 7 ? 7.271 5.892 4.726 1.00 10.67 ? 7 SER A HB2 1 ATOM 105 H HB3 . SER A 1 7 ? 6.738 4.621 5.474 1.00 10.67 ? 7 SER A HB3 1 ATOM 106 H HG . SER A 1 7 ? 5.288 6.494 4.618 1.00 15.76 ? 7 SER A HG 1 ATOM 107 N N . TYR A 1 8 ? 6.371 6.347 8.991 1.00 6.11 ? 8 TYR A N 1 ATOM 108 C CA . TYR A 1 8 ? 5.984 5.833 10.362 1.00 6.08 ? 8 TYR A CA 1 ATOM 109 C C . TYR A 1 8 ? 4.676 6.546 10.752 1.00 5.83 ? 8 TYR A C 1 ATOM 110 O O . TYR A 1 8 ? 4.677 7.725 11.021 1.00 7.30 ? 8 TYR A O 1 ATOM 111 C CB . TYR A 1 8 ? 7.080 6.147 11.434 1.00 5.61 ? 8 TYR A CB 1 ATOM 112 C CG . TYR A 1 8 ? 6.812 5.582 12.771 1.00 7.58 ? 8 TYR A CG 1 ATOM 113 C CD1 . TYR A 1 8 ? 6.067 4.387 12.955 1.00 9.53 ? 8 TYR A CD1 1 ATOM 114 C CD2 . TYR A 1 8 ? 7.392 6.199 13.929 1.00 9.04 ? 8 TYR A CD2 1 ATOM 115 C CE1 . TYR A 1 8 ? 5.966 3.838 14.283 1.00 9.96 ? 8 TYR A CE1 1 ATOM 116 C CE2 . TYR A 1 8 ? 7.208 5.577 15.235 1.00 9.74 ? 8 TYR A CE2 1 ATOM 117 C CZ . TYR A 1 8 ? 6.565 4.341 15.360 1.00 11.50 ? 8 TYR A CZ 1 ATOM 118 O OH . TYR A 1 8 ? 6.476 3.724 16.601 1.00 14.49 ? 8 TYR A OH 1 ATOM 119 H H . TYR A 1 8 ? 6.382 7.192 8.834 1.00 7.34 ? 8 TYR A H 1 ATOM 120 H HA . TYR A 1 8 ? 5.832 4.866 10.320 1.00 7.30 ? 8 TYR A HA 1 ATOM 121 H HB3 . TYR A 1 8 ? 7.107 7.121 11.537 1.00 6.74 ? 8 TYR A HB3 1 ATOM 122 H HD1 . TYR A 1 8 ? 5.655 3.968 12.234 1.00 11.43 ? 8 TYR A HD1 1 ATOM 123 H HD2 . TYR A 1 8 ? 7.880 6.987 13.848 1.00 10.85 ? 8 TYR A HD2 1 ATOM 124 H HE1 . TYR A 1 8 ? 5.445 3.076 14.397 1.00 11.95 ? 8 TYR A HE1 1 ATOM 125 H HE2 . TYR A 1 8 ? 7.524 6.008 15.996 1.00 11.69 ? 8 TYR A HE2 1 ATOM 126 H HH . TYR A 1 8 ? 6.982 4.096 17.128 1.00 21.74 ? 8 TYR A HH 1 ATOM 127 N N . ARG A 1 9 ? 3.598 5.760 10.639 1.00 6.96 ? 9 ARG A N 1 ATOM 128 C CA . ARG A 1 9 ? 2.233 6.259 10.891 1.00 7.09 ? 9 ARG A CA 1 ATOM 129 C C . ARG A 1 9 ? 1.677 5.527 12.143 1.00 6.02 ? 9 ARG A C 1 ATOM 130 O O . ARG A 1 9 ? 1.716 4.301 12.195 1.00 7.55 ? 9 ARG A O 1 ATOM 131 C CB . ARG A 1 9 ? 1.332 6.127 9.731 1.00 8.08 ? 9 ARG A CB 1 ATOM 132 C CG . ARG A 1 9 ? -0.127 6.633 10.117 1.00 9.32 ? 9 ARG A CG 1 ATOM 133 C CD . ARG A 1 9 ? -1.083 6.718 8.832 1.00 10.18 ? 9 ARG A CD 1 ATOM 134 N NE . ARG A 1 9 ? -0.751 7.798 7.994 1.00 11.20 ? 9 ARG A NE 1 ATOM 135 C CZ . ARG A 1 9 ? -1.096 9.061 8.025 1.00 8.47 ? 9 ARG A CZ 1 ATOM 136 N NH1 . ARG A 1 9 ? -1.689 9.480 9.015 1.00 11.74 ? 9 ARG A NH1 1 ATOM 137 N NH2 . ARG A 1 9 ? -0.782 9.835 6.954 1.00 12.31 ? 9 ARG A NH2 1 ATOM 138 H H . ARG A 1 9 ? 3.705 4.938 10.412 1.00 8.35 ? 9 ARG A H 1 ATOM 139 H HA . ARG A 1 9 ? 2.300 7.212 11.109 1.00 8.51 ? 9 ARG A HA 1 ATOM 140 H HB2 . ARG A 1 9 ? 1.674 6.651 8.991 1.00 9.69 ? 9 ARG A HB2 1 ATOM 141 H HB3 . ARG A 1 9 ? 1.292 5.199 9.452 1.00 9.69 ? 9 ARG A HB3 1 ATOM 142 H HG2 . ARG A 1 9 ? -0.516 6.026 10.766 1.00 11.19 ? 9 ARG A HG2 1 ATOM 143 H HG3 . ARG A 1 9 ? -0.064 7.510 10.528 1.00 11.19 ? 9 ARG A HG3 1 ATOM 144 H HD2 . ARG A 1 9 ? -1.014 5.892 8.329 1.00 12.21 ? 9 ARG A HD2 1 ATOM 145 H HD3 . ARG A 1 9 ? -2.003 6.813 9.124 1.00 12.21 ? 9 ARG A HD3 1 ATOM 146 H HE . ARG A 1 9 ? -0.226 7.592 7.345 1.00 13.43 ? 9 ARG A HE 1 ATOM 147 H HH11 . ARG A 1 9 ? -1.868 8.948 9.667 1.00 14.09 ? 9 ARG A HH11 1 ATOM 148 H HH12 . ARG A 1 9 ? -1.926 10.306 9.057 1.00 14.09 ? 9 ARG A HH12 1 ATOM 149 H HH21 . ARG A 1 9 ? -1.000 10.667 6.946 1.00 14.77 ? 9 ARG A HH21 1 ATOM 150 H HH22 . ARG A 1 9 ? -0.365 9.493 6.284 1.00 14.77 ? 9 ARG A HH22 1 ATOM 151 N N . PHE A 1 10 ? 1.195 6.223 13.140 1.00 7.68 ? 10 PHE A N 1 ATOM 152 C CA . PHE A 1 10 ? 0.659 5.679 14.442 1.00 7.44 ? 10 PHE A CA 1 ATOM 153 C C . PHE A 1 10 ? -0.373 6.486 15.107 1.00 8.55 ? 10 PHE A C 1 ATOM 154 O O . PHE A 1 10 ? -0.527 7.605 14.695 1.00 10.78 ? 10 PHE A O 1 ATOM 155 C CB . PHE A 1 10 ? 1.911 5.389 15.366 1.00 8.73 ? 10 PHE A CB 1 ATOM 156 C CG . PHE A 1 10 ? 2.777 6.532 15.731 1.00 9.48 ? 10 PHE A CG 1 ATOM 157 C CD1 . PHE A 1 10 ? 3.778 6.917 14.932 1.00 10.56 ? 10 PHE A CD1 1 ATOM 158 C CD2 . PHE A 1 10 ? 2.456 7.258 16.816 1.00 10.26 ? 10 PHE A CD2 1 ATOM 159 C CE1 . PHE A 1 10 ? 4.566 8.008 15.201 1.00 11.68 ? 10 PHE A CE1 1 ATOM 160 C CE2 . PHE A 1 10 ? 3.249 8.422 17.163 1.00 10.08 ? 10 PHE A CE2 1 ATOM 161 C CZ . PHE A 1 10 ? 4.258 8.734 16.353 1.00 9.30 ? 10 PHE A CZ 1 ATOM 162 O OXT . PHE A 1 10 ? -0.978 6.008 16.056 1.00 13.43 ? 10 PHE A OXT 1 ATOM 163 H H . PHE A 1 10 ? 1.183 7.078 13.044 1.00 9.22 ? 10 PHE A H 1 ATOM 164 H HA . PHE A 1 10 ? 0.252 4.812 14.238 1.00 8.93 ? 10 PHE A HA 1 ATOM 165 H HB2 . PHE A 1 10 ? 1.587 4.987 16.188 1.00 10.47 ? 10 PHE A HB2 1 ATOM 166 H HB3 . PHE A 1 10 ? 2.462 4.727 14.921 1.00 10.47 ? 10 PHE A HB3 1 ATOM 167 H HD1 . PHE A 1 10 ? 3.947 6.424 14.162 1.00 12.68 ? 10 PHE A HD1 1 ATOM 168 H HD2 . PHE A 1 10 ? 1.728 7.016 17.341 1.00 12.31 ? 10 PHE A HD2 1 ATOM 169 H HE1 . PHE A 1 10 ? 5.270 8.251 14.644 1.00 14.01 ? 10 PHE A HE1 1 ATOM 170 H HE2 . PHE A 1 10 ? 3.061 8.929 17.920 1.00 12.10 ? 10 PHE A HE2 1 ATOM 171 H HZ . PHE A 1 10 ? 4.784 9.471 16.565 1.00 11.16 ? 10 PHE A HZ 1 ATOM 172 H HXT . PHE A 1 10 ? -1.585 6.514 16.276 1.00 20.15 ? 10 PHE A HXT 1 HETATM 173 O O . HOH B 2 . ? 14.901 8.316 7.201 1.00 38.92 ? 101 HOH A O 1 HETATM 174 O O . HOH B 2 . ? 8.463 3.801 18.180 1.00 18.89 ? 102 HOH A O 1 HETATM 175 O O . HOH B 2 . ? -3.574 5.864 16.784 1.00 13.64 ? 103 HOH A O 1 HETATM 176 O O . HOH B 2 . ? 4.636 5.154 2.768 1.00 32.87 ? 104 HOH A O 1 HETATM 177 O O . HOH B 2 . ? 12.128 2.728 11.452 1.00 9.61 ? 105 HOH A O 1 HETATM 178 O O . HOH B 2 . ? 21.895 8.654 7.002 1.00 23.61 ? 106 HOH A O 1 HETATM 179 O O . HOH B 2 . ? -1.736 12.701 7.594 1.00 44.70 ? 107 HOH A O 1 HETATM 180 O O . HOH B 2 . ? 27.805 0.325 1.234 1.00 41.42 ? 108 HOH A O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 N N . TRP A 1 ? 0.1344 0.2344 0.3025 0.0145 0.1029 -0.0834 1 TRP A N 2 C CA . TRP A 1 ? 0.0616 0.1179 0.2508 -0.0236 -0.0256 -0.0264 1 TRP A CA 3 C C . TRP A 1 ? 0.1108 0.1967 0.1605 0.0555 0.0639 -0.0238 1 TRP A C 4 O O . TRP A 1 ? 0.2700 0.1567 0.2329 -0.0176 0.1593 -0.0213 1 TRP A O 5 C CB . TRP A 1 ? 0.0748 0.2378 0.1152 -0.0198 0.0243 -0.0672 1 TRP A CB 6 C CG . TRP A 1 ? 0.1249 0.1437 0.1138 -0.0024 0.0230 -0.0153 1 TRP A CG 7 C CD1 . TRP A 1 ? 0.1602 0.1303 0.1402 0.0313 0.0607 0.0280 1 TRP A CD1 8 C CD2 . TRP A 1 ? 0.0634 0.1528 0.1257 -0.0210 0.0065 0.0066 1 TRP A CD2 9 N NE1 . TRP A 1 ? 0.1511 0.0737 0.1930 0.0098 0.0753 -0.0044 1 TRP A NE1 10 C CE2 . TRP A 1 ? 0.0282 0.1074 0.1973 -0.0180 -0.0176 -0.0101 1 TRP A CE2 11 C CE3 . TRP A 1 ? 0.0640 0.2166 0.1475 0.0218 0.0167 0.0012 1 TRP A CE3 12 C CZ2 . TRP A 1 ? 0.0453 0.0823 0.1951 -0.0243 -0.0235 -0.0034 1 TRP A CZ2 13 C CZ3 . TRP A 1 ? 0.0690 0.1935 0.1925 -0.0214 -0.0151 -0.0366 1 TRP A CZ3 14 C CH2 . TRP A 1 ? 0.0408 0.1728 0.2053 0.0104 0.0398 0.0733 1 TRP A CH2 26 N N . ASN A 2 ? 0.2046 0.1473 0.1329 0.0092 0.0527 -0.0708 2 ASN A N 27 C CA . ASN A 2 ? 0.0771 0.4637 0.1599 -0.1090 0.0400 -0.1114 2 ASN A CA 28 C C . ASN A 2 ? 0.1080 0.1566 0.1178 0.0274 0.0607 -0.0548 2 ASN A C 29 O O . ASN A 2 ? 0.1732 0.2538 0.1633 0.0386 0.0671 -0.1098 2 ASN A O 30 C CB . ASN A 2 ? 0.3178 0.1015 0.4834 0.0005 0.1031 -0.0516 2 ASN A CB 31 C CG . ASN A 2 ? 0.3202 0.1021 0.4842 0.0000 0.1012 -0.0505 2 ASN A CG 32 O OD1 . ASN A 2 ? 0.3203 0.1042 0.4845 0.0000 0.1011 -0.0478 2 ASN A OD1 33 N ND2 . ASN A 2 ? 0.3274 0.1043 0.4872 -0.0011 0.0949 -0.0490 2 ASN A ND2 40 N N . SER A 3 ? 0.1312 0.1051 0.1294 -0.0183 0.0511 -0.0411 3 SER A N 41 C CA . SER A 3 ? 0.0928 0.1860 0.1353 -0.0209 0.0364 -0.0432 3 SER A CA 42 C C . SER A 3 ? 0.0733 0.1393 0.1555 0.0193 0.0264 -0.0416 3 SER A C 43 O O . SER A 3 ? 0.1404 0.2172 0.1322 0.0546 0.0552 -0.0267 3 SER A O 44 C CB . SER A 3 ? 0.2503 0.0864 0.1795 0.0137 0.1167 -0.0144 3 SER A CB 45 O OG . SER A 3 ? 0.2256 0.2139 0.2323 0.0297 0.0901 0.0133 3 SER A OG 51 N N . ASN A 4 ? 0.1118 0.1022 0.1365 0.0160 0.0551 -0.0134 4 ASN A N 52 C CA . ASN A 4 ? 0.0957 0.1312 0.2968 -0.0005 0.0312 -0.0568 4 ASN A CA 53 C C . ASN A 4 ? 0.0597 0.1361 0.3240 0.0034 0.0432 -0.1120 4 ASN A C 54 O O . ASN A 4 ? 0.1070 0.2350 0.9862 0.0112 0.0332 -0.4000 4 ASN A O 55 C CB . ASN A 4 ? 0.1286 0.0784 0.2850 -0.0080 0.0080 -0.0385 4 ASN A CB 56 C CG . ASN A 4 ? 0.1745 0.1186 0.2828 -0.0022 0.0453 0.0351 4 ASN A CG 57 O OD1 . ASN A 4 ? 0.1274 0.2786 0.1601 0.0454 0.0161 0.0055 4 ASN A OD1 58 N ND2 . ASN A 4 ? 0.4993 0.1033 1.3105 -0.1051 0.0234 0.2656 4 ASN A ND2 64 N N . VAL A 5 ? 0.0881 0.0690 0.1119 0.0017 0.0320 -0.0044 5 VAL A N 65 C CA . VAL A 5 ? 0.0818 0.0578 0.1237 0.0088 0.0260 0.0007 5 VAL A CA 66 C C . VAL A 5 ? 0.0744 0.0555 0.1064 -0.0090 0.0479 -0.0009 5 VAL A C 67 O O . VAL A 5 ? 0.1218 0.0259 0.1264 -0.0132 0.0720 0.0030 5 VAL A O 68 C CB . VAL A 5 ? 0.0893 0.0736 0.1221 0.0210 0.0297 0.0158 5 VAL A CB 69 C CG1 . VAL A 5 ? 0.1078 0.0915 0.2151 0.0178 0.0742 0.0358 5 VAL A CG1 70 C CG2 . VAL A 5 ? 0.1329 0.1008 0.1078 0.0139 0.0444 0.0042 5 VAL A CG2 80 N N . HIS A 6 ? 0.0948 0.0423 0.1331 0.0008 0.0565 0.0042 6 HIS A N 81 C CA . HIS A 6 ? 0.1180 0.0228 0.1252 -0.0077 0.0882 0.0165 6 HIS A CA 82 C C . HIS A 6 ? 0.0582 0.0808 0.0835 -0.0055 0.0389 -0.0008 6 HIS A C 83 O O . HIS A 6 ? 0.0965 0.0322 0.1257 -0.0022 0.0461 0.0140 6 HIS A O 84 C CB . HIS A 6 ? 0.0845 0.0893 0.1108 0.0006 0.0391 0.0096 6 HIS A CB 85 C CG . HIS A 6 ? 0.0949 0.0685 0.1160 -0.0088 0.0658 0.0123 6 HIS A CG 86 N ND1 . HIS A 6 ? 0.1022 0.0708 0.1259 0.0085 0.0387 0.0237 6 HIS A ND1 87 C CD2 . HIS A 6 ? 0.0916 0.0349 0.1164 0.0089 0.0313 0.0223 6 HIS A CD2 88 C CE1 . HIS A 6 ? 0.1115 0.0611 0.1030 -0.0056 0.0722 0.0114 6 HIS A CE1 89 N NE2 . HIS A 6 ? 0.1308 0.0184 0.1401 0.0079 0.0635 -0.0074 6 HIS A NE2 96 N N . SER A 7 ? 0.0800 0.0418 0.1329 0.0031 0.0638 0.0125 7 SER A N 97 C CA . SER A 7 ? 0.0866 0.0543 0.1006 -0.0115 0.0417 -0.0058 7 SER A CA 98 C C . SER A 7 ? 0.0657 0.0180 0.1145 -0.0103 0.0255 -0.0074 7 SER A C 99 O O . SER A 7 ? 0.0716 0.0759 0.0961 -0.0033 0.0477 -0.0007 7 SER A O 100 C CB . SER A 7 ? 0.1337 0.0615 0.1223 0.0068 0.0562 0.0085 7 SER A CB 101 O OG . SER A 7 ? 0.1093 0.1516 0.1146 0.0068 0.0153 0.0165 7 SER A OG 107 N N . TYR A 8 ? 0.0873 0.0163 0.1149 -0.0027 0.0388 -0.0108 8 TYR A N 108 C CA . TYR A 8 ? 0.0586 0.0189 0.1400 0.0040 0.0448 0.0106 8 TYR A CA 109 C C . TYR A 8 ? 0.0573 0.0440 0.1071 -0.0120 0.0338 0.0021 8 TYR A C 110 O O . TYR A 8 ? 0.1151 0.0074 0.1386 0.0003 0.0622 -0.0017 8 TYR A O 111 C CB . TYR A 8 ? 0.0448 0.0419 0.1138 0.0087 0.0095 -0.0044 8 TYR A CB 112 C CG . TYR A 8 ? 0.1099 0.0779 0.0831 0.0045 0.0627 -0.0024 8 TYR A CG 113 C CD1 . TYR A 8 ? 0.1321 0.0791 0.1293 0.0033 0.0648 0.0222 8 TYR A CD1 114 C CD2 . TYR A 8 ? 0.1328 0.1113 0.0791 0.0226 0.0715 -0.0044 8 TYR A CD2 115 C CE1 . TYR A 8 ? 0.1628 0.0697 0.1232 -0.0282 0.0731 0.0262 8 TYR A CE1 116 C CE2 . TYR A 8 ? 0.1139 0.1308 0.1033 0.0237 0.0196 -0.0191 8 TYR A CE2 117 C CZ . TYR A 8 ? 0.1523 0.1339 0.1248 -0.0122 0.0433 -0.0028 8 TYR A CZ 118 O OH . TYR A 8 ? 0.2492 0.1470 0.1217 -0.0110 0.0855 0.0251 8 TYR A OH 127 N N . ARG A 9 ? 0.0897 0.0597 0.0993 0.0232 0.0408 -0.0203 9 ARG A N 128 C CA . ARG A 9 ? 0.0934 0.0312 0.1287 -0.0050 0.0323 0.0056 9 ARG A CA 129 C C . ARG A 9 ? 0.0731 0.0397 0.1023 0.0186 0.0325 -0.0055 9 ARG A C 130 O O . ARG A 9 ? 0.1015 0.0494 0.1190 -0.0133 0.0625 -0.0158 9 ARG A O 131 C CB . ARG A 9 ? 0.0886 0.0941 0.1060 -0.0034 0.0366 0.0005 9 ARG A CB 132 C CG . ARG A 9 ? 0.0700 0.1336 0.1295 0.0102 0.0121 0.0173 9 ARG A CG 133 C CD . ARG A 9 ? 0.0619 0.1260 0.1757 0.0210 -0.0267 -0.0639 9 ARG A CD 134 N NE . ARG A 9 ? 0.1594 0.0639 0.1768 -0.0133 0.0294 0.0311 9 ARG A NE 135 C CZ . ARG A 9 ? 0.0851 0.1171 0.1005 0.0052 0.0190 -0.0199 9 ARG A CZ 136 N NH1 . ARG A 9 ? 0.1568 0.1180 0.1447 0.0146 0.0723 0.0210 9 ARG A NH1 137 N NH2 . ARG A 9 ? 0.1907 0.1029 0.1462 -0.0368 0.0701 0.0022 9 ARG A NH2 151 N N . PHE A 10 ? 0.1338 0.0364 0.1044 0.0033 0.0455 0.0013 10 PHE A N 152 C CA . PHE A 10 ? 0.1398 0.0350 0.0911 -0.0065 0.0465 -0.0005 10 PHE A CA 153 C C . PHE A 10 ? 0.1111 0.1070 0.0874 0.0110 0.0370 0.0052 10 PHE A C 154 O O . PHE A 10 ? 0.1407 0.0903 0.1541 -0.0109 0.0525 0.0074 10 PHE A O 155 C CB . PHE A 10 ? 0.1428 0.0797 0.0893 -0.0082 0.0274 -0.0042 10 PHE A CB 156 C CG . PHE A 10 ? 0.2076 0.0544 0.0766 0.0351 0.0812 -0.0117 10 PHE A CG 157 C CD1 . PHE A 10 ? 0.1443 0.0734 0.1598 0.0008 0.0867 -0.0424 10 PHE A CD1 158 C CD2 . PHE A 10 ? 0.1522 0.1184 0.0960 -0.0225 0.0550 0.0175 10 PHE A CD2 159 C CE1 . PHE A 10 ? 0.1682 0.1220 0.1270 -0.0514 0.0605 -0.0247 10 PHE A CE1 160 C CE2 . PHE A 10 ? 0.1505 0.0859 0.1239 0.0128 0.0117 -0.0287 10 PHE A CE2 161 C CZ . PHE A 10 ? 0.1138 0.0721 0.1463 -0.0161 0.0243 0.0186 10 PHE A CZ 162 O OXT . PHE A 10 ? 0.1802 0.1318 0.1679 0.0266 0.1035 0.0004 10 PHE A OXT 173 O O . HOH B . ? 0.7344 0.1584 0.4977 -0.0370 0.0698 -0.0947 101 HOH A O 174 O O . HOH B . ? 0.2273 0.2199 0.2279 0.0732 0.0851 0.0666 102 HOH A O 175 O O . HOH B . ? 0.2382 0.0786 0.1707 0.0055 0.0617 0.0245 103 HOH A O 176 O O . HOH B . ? 0.5222 0.3942 0.2582 -0.0615 -0.1321 0.0959 104 HOH A O 177 O O . HOH B . ? 0.1230 0.0980 0.1223 -0.0127 0.0181 -0.0013 105 HOH A O 178 O O . HOH B . ? 0.1936 0.3668 0.2833 0.0561 -0.0484 -0.2370 106 HOH A O 179 O O . HOH B . ? 1.1912 0.1183 0.2875 0.0443 0.1369 -0.0947 107 HOH A O 180 O O . HOH B . ? 0.1748 0.9026 0.4027 0.2355 0.0871 0.3360 108 HOH A O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TRP 1 1 1 TRP TRP A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 PHE 10 10 10 PHE PHE A . n # _pdbx_contact_author.id 4 _pdbx_contact_author.email dcrees@caltech.edu _pdbx_contact_author.name_first Douglas _pdbx_contact_author.name_last Rees _pdbx_contact_author.name_mi C _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4073-1185 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 101 103 HOH HOH A . B 2 HOH 2 102 106 HOH HOH A . B 2 HOH 3 103 108 HOH HOH A . B 2 HOH 4 104 105 HOH HOH A . B 2 HOH 5 105 104 HOH HOH A . B 2 HOH 6 106 101 HOH HOH A . B 2 HOH 7 107 107 HOH HOH A . B 2 HOH 8 108 102 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-10-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1 ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 2 ? refinement ? ? 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de ? ? ? ? Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ ? SHELX ? ? package . 3 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Oct. 31, 2020' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.27 4 # _em_3d_fitting.entry_id 7T3H _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7T3H _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution 1.05 _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.symmetry_type '3D CRYSTAL' _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.5 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name Microcrystals _em_entity_assembly.source NATURAL _em_entity_assembly.type CELL _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7T3H _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 0.0 _em_imaging.nominal_defocus_min 0.0 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_experiment.entry_id 7T3H _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 HD22 A ASN 2 ? ? 1_555 HD22 A ASN 2 ? ? 2_655 1.25 2 1 H2 A TRP 1 ? ? 1_555 O A HOH 104 ? ? 3_545 1.52 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE1 A TRP 1 ? ? CE2 A TRP 1 ? ? 1.192 1.371 -0.179 0.013 N 2 1 CE2 A TRP 1 ? ? CZ2 A TRP 1 ? ? 1.224 1.393 -0.169 0.017 N 3 1 CE2 A TRP 1 ? ? CD2 A TRP 1 ? ? 1.513 1.409 0.104 0.012 N 4 1 CZ3 A TRP 1 ? ? CH2 A TRP 1 ? ? 1.512 1.396 0.116 0.016 N 5 1 CA A ASN 2 ? ? C A ASN 2 ? ? 1.701 1.525 0.176 0.026 N 6 1 CZ A ARG 9 ? ? NH1 A ARG 9 ? ? 1.228 1.326 -0.098 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD1 A TRP 1 ? ? NE1 A TRP 1 ? ? CE2 A TRP 1 ? ? 117.99 109.00 8.99 0.90 N 2 1 CG A TRP 1 ? ? CD2 A TRP 1 ? ? CE3 A TRP 1 ? ? 139.37 133.90 5.47 0.90 N 3 1 CH2 A TRP 1 ? ? CZ2 A TRP 1 ? ? CE2 A TRP 1 ? ? 126.31 117.40 8.91 1.00 N 4 1 CB A ASN 2 ? ? CG A ASN 2 ? ? OD1 A ASN 2 ? ? 108.87 121.60 -12.73 2.00 N # _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.angle_alpha 90.00 _em_3d_crystal_entity.angle_beta 112.00 _em_3d_crystal_entity.angle_gamma 90.00 _em_3d_crystal_entity.length_a 42.23 _em_3d_crystal_entity.length_b 9.73 _em_3d_crystal_entity.length_c 19.07 _em_3d_crystal_entity.space_group_name C2 _em_3d_crystal_entity.space_group_num 5 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_diffraction.id 1 _em_diffraction.camera_length 641 _em_diffraction.imaging_id 1 _em_diffraction.tilt_angle_list ? # _em_diffraction_shell.id 1 _em_diffraction_shell.em_diffraction_stats_id 1 _em_diffraction_shell.fourier_space_coverage 98.6 _em_diffraction_shell.high_resolution 1.05 _em_diffraction_shell.low_resolution 9.5 _em_diffraction_shell.multiplicity 6.96 _em_diffraction_shell.num_structure_factors 5002 _em_diffraction_shell.phase_residual 15 # _em_diffraction_stats.id 1 _em_diffraction_stats.details ? _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.fourier_space_coverage 98.0 _em_diffraction_stats.high_resolution 1.05 _em_diffraction_stats.num_intensities_measured 59418 _em_diffraction_stats.num_structure_factors 6485 _em_diffraction_stats.overall_phase_error ? _em_diffraction_stats.overall_phase_residual ? _em_diffraction_stats.phase_error_rejection_criteria NULL _em_diffraction_stats.r_merge 0.205 _em_diffraction_stats.r_sym ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 286156 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Photorhabdus australis' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 0.0165 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI CETA (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'IMAGE ACQUISITION' ? ? ? ? ? 1 2 MASKING ? ? ? ? ? ? 3 'CTF CORRECTION' ? ? ? 1 ? ? 4 'LAYERLINE INDEXING' ? ? ? ? ? ? 5 'DIFFRACTION INDEXING' ? ? ? ? ? ? 6 'MODEL FITTING' ? ? ? ? 1 ? 7 OTHER ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? 1 ? 9 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ? 10 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ? 11 'SYMMETRY DETERMINATION' ? ? ? 1 ? ? 12 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied NO # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swiss National Science Foundation' ? 177084 1 'Swiss National Science Foundation' ? 187170 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? #