data_8ANK # _entry.id 8ANK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8ANK pdb_00008ank 10.2210/pdb8ank/pdb WWPDB D_1292124764 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8ANK _pdbx_database_status.recvd_initial_deposition_date 2022-08-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Durvanger, Z.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-2652-4916 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 4621 _citation.page_last 4621 _citation.title 'Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-40294-x _citation.pdbx_database_id_PubMed 37528104 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horvath, D.' 1 0000-0001-8239-3933 primary 'Durvanger, Z.' 2 0000-0002-2652-4916 primary 'K Menyhard, D.' 3 0000-0002-0095-5531 primary 'Sulyok-Eiler, M.' 4 ? primary 'Bencs, F.' 5 0009-0003-9246-2228 primary 'Gyulai, G.' 6 0000-0002-1352-2014 primary 'Horvath, P.' 7 0000-0001-7149-4173 primary 'Taricska, N.' 8 ? primary 'Perczel, A.' 9 0000-0003-1252-6416 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 92.740 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8ANK _cell.details ? _cell.formula_units_Z ? _cell.length_a 20.710 _cell.length_a_esd ? _cell.length_b 9.545 _cell.length_b_esd ? _cell.length_c 22.396 _cell.length_c_esd ? _cell.volume 4422.112 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8ANK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Peptide pEFIAWL from hGLP-1' 759.891 1 ? ? ? ? 2 water nat water 18.015 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(PCA)FIAWL' _entity_poly.pdbx_seq_one_letter_code_can QFIAWL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 PHE n 1 3 ILE n 1 4 ALA n 1 5 TRP n 1 6 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8ANK _struct_ref.pdbx_db_accession 8ANK _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8ANK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8ANK _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 6 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8ANK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.45 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 15.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'EVAPORATION, RECRYSTALLIZATION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 310 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;EFIAWL was dissolved in 0.15 - 0.5 mg/ml concentration in a solution containing 30 % acetonitrile and 0.1 % TFA and incubated at 310K for several weeks. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU HyPix-6000HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-29 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54184 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU PhotonJet-R' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54184 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 5.48 _reflns.entry_id 8ANK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.30 _reflns.d_resolution_low 11.19 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1157 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.83 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.78 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.106 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.35 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 114 _reflns_shell.percent_possible_all 99.13 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.331 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.893 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 5.34 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8ANK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.30 _refine.ls_d_res_low 11.19 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1153 _refine.ls_number_reflns_R_free 121 _refine.ls_number_reflns_R_work 1032 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.48 _refine.ls_percent_reflns_R_free 10.49 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1039 _refine.ls_R_factor_R_free 0.1298 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1013 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.42 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'ideal 5 residue beta strand form the software Fragon' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 10.9139 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0624 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 11.19 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 57 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 55 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0146 ? 58 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.9108 ? 80 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.1116 ? 8 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0090 ? 9 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 22.7172 ? 18 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.30 _refine_ls_shell.d_res_low 11.19 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.number_reflns_R_work 1032 _refine_ls_shell.percent_reflns_obs 99.48 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.1298 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1013 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 8ANK _struct.title 'Structure of the amyloid-forming peptide pEFIAWL from human GLP-1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8ANK _struct_keywords.text 'amyloid, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id PCA _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id PHE _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PCA _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PHE _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.317 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 8ANK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.048286 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002311 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.104767 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.044702 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 N N . PCA A 1 1 ? 7.18776 0.80620 -8.84605 1.000 4.48738 ? 1 PCA A N 1 HETATM 2 C CA . PCA A 1 1 ? 6.85378 -0.05928 -7.70592 1.000 4.29525 ? 1 PCA A CA 1 HETATM 3 C CB . PCA A 1 1 ? 8.17023 -0.45902 -7.06060 1.000 4.99533 ? 1 PCA A CB 1 HETATM 4 C CG . PCA A 1 1 ? 9.20280 -0.38971 -8.17499 1.000 5.24010 ? 1 PCA A CG 1 HETATM 5 C CD . PCA A 1 1 ? 8.56812 0.58446 -9.12832 1.000 5.07956 ? 1 PCA A CD 1 HETATM 6 O OE . PCA A 1 1 ? 9.15532 1.13713 -10.05318 1.000 5.71384 ? 1 PCA A OE 1 HETATM 7 C C . PCA A 1 1 ? 5.99742 0.63395 -6.67160 1.000 4.00574 ? 1 PCA A C 1 HETATM 8 O O . PCA A 1 1 ? 5.96829 1.86085 -6.54746 1.000 4.20313 ? 1 PCA A O 1 HETATM 9 H HA . PCA A 1 1 ? 6.35649 -0.84194 -8.02300 1.000 5.15430 ? 1 PCA A HA 1 HETATM 10 H HB2 . PCA A 1 1 ? 8.38970 0.15444 -6.32855 1.000 5.99440 ? 1 PCA A HB2 1 HETATM 11 H HB3 . PCA A 1 1 ? 8.10473 -1.36263 -6.68696 1.000 5.99440 ? 1 PCA A HB3 1 HETATM 12 H HG2 . PCA A 1 1 ? 10.06694 -0.07005 -7.84108 1.000 6.28812 ? 1 PCA A HG2 1 HETATM 13 H HG3 . PCA A 1 1 ? 9.34467 -1.26850 -8.58487 1.000 6.28812 ? 1 PCA A HG3 1 ATOM 14 N N . PHE A 1 2 ? 5.28012 -0.19125 -5.93709 1.000 3.97942 ? 2 PHE A N 1 ATOM 15 C CA . PHE A 1 2 ? 4.47595 0.18898 -4.77915 1.000 3.74782 ? 2 PHE A CA 1 ATOM 16 C C . PHE A 1 2 ? 5.15503 -0.40639 -3.55932 1.000 2.71349 ? 2 PHE A C 1 ATOM 17 O O . PHE A 1 2 ? 5.34535 -1.61469 -3.51312 1.000 3.92152 ? 2 PHE A O 1 ATOM 18 C CB . PHE A 1 2 ? 3.04753 -0.35104 -4.88395 1.000 4.29526 ? 2 PHE A CB 1 ATOM 19 C CG . PHE A 1 2 ? 2.17085 0.06448 -3.75082 1.000 6.62975 ? 2 PHE A CG 1 ATOM 20 C CD1 . PHE A 1 2 ? 1.91551 1.38066 -3.53655 1.000 7.68250 ? 2 PHE A CD1 1 ATOM 21 C CD2 . PHE A 1 2 ? 1.59511 -0.85792 -2.94611 1.000 9.02740 ? 2 PHE A CD2 1 ATOM 22 C CE1 . PHE A 1 2 ? 1.09869 1.80158 -2.52171 1.000 9.92750 ? 2 PHE A CE1 1 ATOM 23 C CE2 . PHE A 1 2 ? 0.73237 -0.45346 -1.91032 1.000 10.69864 ? 2 PHE A CE2 1 ATOM 24 C CZ . PHE A 1 2 ? 0.50689 0.88365 -1.72096 1.000 10.55916 ? 2 PHE A CZ 1 ATOM 25 H H . PHE A 1 2 ? 5.23452 -1.03570 -6.09332 1.000 4.77531 ? 2 PHE A H 1 ATOM 26 H HA . PHE A 1 2 ? 4.39992 1.15368 -4.71227 1.000 4.49738 ? 2 PHE A HA 1 ATOM 27 H HB2 . PHE A 1 2 ? 2.64819 -0.02271 -5.70469 1.000 5.15431 ? 2 PHE A HB2 1 ATOM 28 H HB3 . PHE A 1 2 ? 3.07941 -1.32045 -4.89518 1.000 5.15431 ? 2 PHE A HB3 1 ATOM 29 H HD1 . PHE A 1 2 ? 2.30628 2.01375 -4.09459 1.000 9.21901 ? 2 PHE A HD1 1 ATOM 30 H HD2 . PHE A 1 2 ? 1.76987 -1.76183 -3.07768 1.000 10.83288 ? 2 PHE A HD2 1 ATOM 31 H HE1 . PHE A 1 2 ? 0.95159 2.70942 -2.38351 1.000 11.91300 ? 2 PHE A HE1 1 ATOM 32 H HE2 . PHE A 1 2 ? 0.32218 -1.08406 -1.36351 1.000 12.83837 ? 2 PHE A HE2 1 ATOM 33 H HZ . PHE A 1 2 ? -0.05731 1.16383 -1.03680 1.000 12.67099 ? 2 PHE A HZ 1 ATOM 34 N N . ILE A 1 3 ? 5.48002 0.42474 -2.58851 1.000 2.86614 ? 3 ILE A N 1 ATOM 35 C CA . ILE A 1 3 ? 6.17401 -0.01012 -1.38872 1.000 3.17933 ? 3 ILE A CA 1 ATOM 36 C C . ILE A 1 3 ? 5.49492 0.60352 -0.18854 1.000 2.40030 ? 3 ILE A C 1 ATOM 37 O O . ILE A 1 3 ? 5.26045 1.80588 -0.17042 1.000 3.28460 ? 3 ILE A O 1 ATOM 38 C CB . ILE A 1 3 ? 7.66453 0.38278 -1.43113 1.000 4.91639 ? 3 ILE A CB 1 ATOM 39 C CG1 . ILE A 1 3 ? 8.32677 -0.16384 -2.67346 1.000 6.73239 ? 3 ILE A CG1 1 ATOM 40 C CG2 . ILE A 1 3 ? 8.33825 -0.09828 -0.15364 1.000 7.28508 ? 3 ILE A CG2 1 ATOM 41 C CD1 . ILE A 1 3 ? 9.64271 0.49942 -3.00139 1.000 8.05096 ? 3 ILE A CD1 1 ATOM 42 H H . ILE A 1 3 ? 5.30567 1.26680 -2.60031 1.000 3.43936 ? 3 ILE A H 1 ATOM 43 H HA . ILE A 1 3 ? 6.10821 -0.97449 -1.30772 1.000 3.81519 ? 3 ILE A HA 1 ATOM 44 H HB . ILE A 1 3 ? 7.75005 1.34788 -1.47773 1.000 5.89966 ? 3 ILE A HB 1 ATOM 45 H HG12 . ILE A 1 3 ? 8.49568 -1.11052 -2.54630 1.000 8.07886 ? 3 ILE A HG12 1 ATOM 46 H HG13 . ILE A 1 3 ? 7.73201 -0.03141 -3.42819 1.000 8.07886 ? 3 ILE A HG13 1 ATOM 47 H HG21 . ILE A 1 3 ? 9.30013 -0.07918 -0.27742 1.000 8.74209 ? 3 ILE A HG21 1 ATOM 48 H HG22 . ILE A 1 3 ? 8.08696 0.48898 0.57634 1.000 8.74209 ? 3 ILE A HG22 1 ATOM 49 H HG23 . ILE A 1 3 ? 8.04697 -1.00403 0.03521 1.000 8.74209 ? 3 ILE A HG23 1 ATOM 50 H HD11 . ILE A 1 3 ? 10.27793 0.30778 -2.29382 1.000 9.66115 ? 3 ILE A HD11 1 ATOM 51 H HD12 . ILE A 1 3 ? 9.97117 0.14973 -3.84444 1.000 9.66115 ? 3 ILE A HD12 1 ATOM 52 H HD13 . ILE A 1 3 ? 9.50484 1.45700 -3.07172 1.000 9.66115 ? 3 ILE A HD13 1 ATOM 53 N N . ALA A 1 4 ? 5.24294 -0.17827 0.83724 1.000 2.94246 ? 4 ALA A N 1 ATOM 54 C CA . ALA A 1 4 ? 4.63906 0.31396 2.06139 1.000 3.77413 ? 4 ALA A CA 1 ATOM 55 C C . ALA A 1 4 ? 5.26228 -0.36965 3.26359 1.000 2.66349 ? 4 ALA A C 1 ATOM 56 O O . ALA A 1 4 ? 5.45651 -1.58574 3.28152 1.000 3.81098 ? 4 ALA A O 1 ATOM 57 C CB . ALA A 1 4 ? 3.11084 0.10705 2.06652 1.000 5.33485 ? 4 ALA A CB 1 ATOM 58 H H . ALA A 1 4 ? 5.41577 -1.02058 0.85278 1.000 3.53095 ? 4 ALA A H 1 ATOM 59 H HA . ALA A 1 4 ? 4.81686 1.26436 2.13903 1.000 4.52896 ? 4 ALA A HA 1 ATOM 60 H HB1 . ALA A 1 4 ? 2.72536 0.58177 1.31356 1.000 6.40182 ? 4 ALA A HB1 1 ATOM 61 H HB2 . ALA A 1 4 ? 2.92029 -0.84116 1.99238 1.000 6.40182 ? 4 ALA A HB2 1 ATOM 62 H HB3 . ALA A 1 4 ? 2.74804 0.45342 2.89676 1.000 6.40182 ? 4 ALA A HB3 1 ATOM 63 N N . TRP A 1 5 ? 5.49523 0.43029 4.29285 1.000 3.45304 ? 5 TRP A N 1 ATOM 64 C CA . TRP A 1 5 ? 5.87598 -0.03909 5.62232 1.000 3.16354 ? 5 TRP A CA 1 ATOM 65 C C . TRP A 1 5 ? 4.95066 0.63915 6.60844 1.000 3.08985 ? 5 TRP A C 1 ATOM 66 O O . TRP A 1 5 ? 4.97887 1.86181 6.73602 1.000 3.38461 ? 5 TRP A O 1 ATOM 67 C CB . TRP A 1 5 ? 7.32746 0.31231 5.97911 1.000 3.67676 ? 5 TRP A CB 1 ATOM 68 C CG . TRP A 1 5 ? 7.67273 0.03629 7.39795 1.000 4.05312 ? 5 TRP A CG 1 ATOM 69 C CD1 . TRP A 1 5 ? 7.80824 0.95417 8.39109 1.000 5.72437 ? 5 TRP A CD1 1 ATOM 70 C CD2 . TRP A 1 5 ? 7.86048 -1.23837 8.01854 1.000 5.06377 ? 5 TRP A CD2 1 ATOM 71 N NE1 . TRP A 1 5 ? 8.10002 0.35378 9.57358 1.000 5.96387 ? 5 TRP A NE1 1 ATOM 72 C CE2 . TRP A 1 5 ? 8.15683 -0.99745 9.38212 1.000 5.95335 ? 5 TRP A CE2 1 ATOM 73 C CE3 . TRP A 1 5 ? 7.82028 -2.56519 7.56365 1.000 5.51908 ? 5 TRP A CE3 1 ATOM 74 C CZ2 . TRP A 1 5 ? 8.41111 -2.02379 10.28863 1.000 6.10336 ? 5 TRP A CZ2 1 ATOM 75 C CZ3 . TRP A 1 5 ? 8.06357 -3.58618 8.46333 1.000 7.66670 ? 5 TRP A CZ3 1 ATOM 76 C CH2 . TRP A 1 5 ? 8.37785 -3.30731 9.82058 1.000 7.39825 ? 5 TRP A CH2 1 ATOM 77 H H . TRP A 1 5 ? 5.43748 1.28713 4.24715 1.000 4.14365 ? 5 TRP A H 1 ATOM 78 H HA . TRP A 1 5 ? 5.78419 -1.00406 5.65835 1.000 3.79625 ? 5 TRP A HA 1 ATOM 79 H HB2 . TRP A 1 5 ? 7.92262 -0.21238 5.42110 1.000 4.41211 ? 5 TRP A HB2 1 ATOM 80 H HB3 . TRP A 1 5 ? 7.46915 1.25820 5.81754 1.000 4.41211 ? 5 TRP A HB3 1 ATOM 81 H HD1 . TRP A 1 5 ? 7.71363 1.87216 8.27600 1.000 6.86924 ? 5 TRP A HD1 1 ATOM 82 H HE1 . TRP A 1 5 ? 8.22822 0.75851 10.32149 1.000 7.15665 ? 5 TRP A HE1 1 ATOM 83 H HE3 . TRP A 1 5 ? 7.63324 -2.75438 6.67252 1.000 6.62290 ? 5 TRP A HE3 1 ATOM 84 H HZ2 . TRP A 1 5 ? 8.59708 -1.84195 11.18152 1.000 7.32404 ? 5 TRP A HZ2 1 ATOM 85 H HZ3 . TRP A 1 5 ? 8.02086 -4.46953 8.17564 1.000 9.20004 ? 5 TRP A HZ3 1 ATOM 86 H HH2 . TRP A 1 5 ? 8.56411 -4.01021 10.40035 1.000 8.87790 ? 5 TRP A HH2 1 ATOM 87 N N . LEU A 1 6 ? 4.12255 -0.12577 7.27927 1.000 3.38725 ? 6 LEU A N 1 ATOM 88 C CA . LEU A 1 6 ? 3.09467 0.45149 8.12282 1.000 4.72162 ? 6 LEU A CA 1 ATOM 89 C C . LEU A 1 6 ? 3.59019 0.81715 9.51864 1.000 5.64015 ? 6 LEU A C 1 ATOM 90 O O . LEU A 1 6 ? 4.41460 0.11005 10.12633 1.000 7.66670 ? 6 LEU A O 1 ATOM 91 C CB . LEU A 1 6 ? 1.86733 -0.45655 8.17018 1.000 4.66371 ? 6 LEU A CB 1 ATOM 92 C CG . LEU A 1 6 ? 1.27420 -0.81477 6.77795 1.000 4.80584 ? 6 LEU A CG 1 ATOM 93 C CD1 . LEU A 1 6 ? 0.06435 -1.66873 6.95224 1.000 5.59014 ? 6 LEU A CD1 1 ATOM 94 C CD2 . LEU A 1 6 ? 0.98866 0.38698 5.93139 1.000 5.49539 ? 6 LEU A CD2 1 ATOM 95 O OXT . LEU A 1 6 ? 3.15354 1.90946 10.00799 1.000 5.49539 ? 6 LEU A OXT 1 ATOM 96 H H . LEU A 1 6 ? 4.13162 -0.98561 7.26574 1.000 4.06470 ? 6 LEU A H 1 ATOM 97 H HA . LEU A 1 6 ? 2.81996 1.29364 7.72756 1.000 5.66594 ? 6 LEU A HA 1 ATOM 98 H HB2 . LEU A 1 6 ? 2.11516 -1.28696 8.60596 1.000 5.59646 ? 6 LEU A HB2 1 ATOM 99 H HB3 . LEU A 1 6 ? 1.17280 -0.00943 8.67872 1.000 5.59646 ? 6 LEU A HB3 1 ATOM 100 H HG . LEU A 1 6 ? 1.94217 -1.31566 6.28418 1.000 5.76701 ? 6 LEU A HG 1 ATOM 101 H HD11 . LEU A 1 6 ? -0.29919 -1.88335 6.07893 1.000 6.70817 ? 6 LEU A HD11 1 ATOM 102 H HD12 . LEU A 1 6 ? 0.31663 -2.48318 7.41477 1.000 6.70817 ? 6 LEU A HD12 1 ATOM 103 H HD13 . LEU A 1 6 ? -0.59311 -1.18226 7.47377 1.000 6.70817 ? 6 LEU A HD13 1 ATOM 104 H HD21 . LEU A 1 6 ? 0.51040 0.10624 5.13556 1.000 6.59447 ? 6 LEU A HD21 1 ATOM 105 H HD22 . LEU A 1 6 ? 0.44691 1.01024 6.44027 1.000 6.59447 ? 6 LEU A HD22 1 ATOM 106 H HD23 . LEU A 1 6 ? 1.82803 0.80477 5.68276 1.000 6.59447 ? 6 LEU A HD23 1 HETATM 107 O O . HOH B 2 . ? 5.257 -2.354 9.903 1.000 5.96000 ? 101 HOH A O 1 HETATM 108 O O . HOH B 2 . ? 10.89031 3.11895 -11.18520 0.50 12.09000 ? 102 HOH A O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 N N . PCA A 1 ? 0.05830 0.05760 0.05460 -0.01520 0.01200 -0.00690 1 PCA A N 2 C CA . PCA A 1 ? 0.05680 0.04670 0.05970 0.01200 0.00140 0.00280 1 PCA A CA 3 C CB . PCA A 1 ? 0.06400 0.06390 0.06190 0.00910 0.00660 0.00700 1 PCA A CB 4 C CG . PCA A 1 ? 0.06670 0.07220 0.06020 -0.00430 0.01040 0.01020 1 PCA A CG 5 C CD . PCA A 1 ? 0.06940 0.06820 0.05540 -0.02520 0.00390 0.00150 1 PCA A CD 6 O OE . PCA A 1 ? 0.08230 0.06980 0.06500 -0.02020 0.00250 -0.01050 1 PCA A OE 7 C C . PCA A 1 ? 0.05190 0.03890 0.06140 0.00430 0.01190 -0.00830 1 PCA A C 8 O O . PCA A 1 ? 0.05320 0.03890 0.06760 0.00720 0.02310 -0.00200 1 PCA A O 14 N N . PHE A 2 ? 0.05430 0.03811 0.05879 0.01280 0.01319 -0.01899 2 PHE A N 15 C CA . PHE A 2 ? 0.05530 0.03370 0.05340 0.00360 0.00790 -0.01670 2 PHE A CA 16 C C . PHE A 2 ? 0.04430 0.01300 0.04580 0.00520 0.00090 -0.00420 2 PHE A C 17 O O . PHE A 2 ? 0.06630 0.02980 0.05290 -0.00850 -0.00330 -0.00340 2 PHE A O 18 C CB . PHE A 2 ? 0.05030 0.05970 0.05320 0.00610 0.00060 -0.01570 2 PHE A CB 19 C CG . PHE A 2 ? 0.07460 0.11370 0.06360 -0.02630 0.00000 -0.01340 2 PHE A CG 20 C CD1 . PHE A 2 ? 0.08430 0.13930 0.06830 -0.02600 0.00360 -0.02110 2 PHE A CD1 21 C CD2 . PHE A 2 ? 0.10070 0.16890 0.07340 -0.01690 0.01290 -0.01910 2 PHE A CD2 22 C CE1 . PHE A 2 ? 0.10810 0.18330 0.08580 -0.02900 0.00580 -0.03060 2 PHE A CE1 23 C CE2 . PHE A 2 ? 0.11920 0.19780 0.08950 -0.01530 0.02780 -0.01610 2 PHE A CE2 24 C CZ . PHE A 2 ? 0.11710 0.19760 0.08650 -0.02340 0.02460 -0.02820 2 PHE A CZ 34 N N . ILE A 3 ? 0.03060 0.03400 0.04430 0.00950 -0.00910 -0.00590 3 ILE A N 35 C CA . ILE A 3 ? 0.03550 0.03290 0.05240 0.00500 -0.01410 0.00120 3 ILE A CA 36 C C . ILE A 3 ? 0.03970 0.01400 0.03750 0.00210 -0.01090 0.00460 3 ILE A C 37 O O . ILE A 3 ? 0.06227 0.01804 0.04449 -0.00659 -0.01088 0.00160 3 ILE A O 38 C CB . ILE A 3 ? 0.02861 0.08489 0.07330 -0.00740 -0.01770 -0.00280 3 ILE A CB 39 C CG1 . ILE A 3 ? 0.03754 0.13167 0.08660 -0.01249 -0.00929 0.01709 3 ILE A CG1 40 C CG2 . ILE A 3 ? 0.04414 0.14865 0.08401 0.00130 -0.01798 0.00240 3 ILE A CG2 41 C CD1 . ILE A 3 ? 0.04610 0.16380 0.09600 -0.01350 -0.01050 0.02340 3 ILE A CD1 53 N N . ALA A 4 ? 0.04920 0.02240 0.04020 0.01230 -0.00970 -0.01080 4 ALA A N 54 C CA . ALA A 4 ? 0.05520 0.04080 0.04740 0.01910 -0.00160 -0.01520 4 ALA A CA 55 C C . ALA A 4 ? 0.04390 0.01400 0.04330 0.00040 -0.00070 -0.00880 4 ALA A C 56 O O . ALA A 4 ? 0.06560 0.02710 0.05210 -0.00710 0.00190 0.00240 4 ALA A O 57 C CB . ALA A 4 ? 0.06590 0.08390 0.05290 0.01600 0.00930 -0.02090 4 ALA A CB 63 N N . TRP A 5 ? 0.06290 0.02940 0.03890 0.00470 0.00380 0.00030 5 TRP A N 64 C CA . TRP A 5 ? 0.05698 0.02102 0.04220 0.01049 0.00399 0.00969 5 TRP A CA 65 C C . TRP A 5 ? 0.05110 0.02030 0.04600 0.01340 0.00400 0.00580 5 TRP A C 66 O O . TRP A 5 ? 0.06079 0.01811 0.04970 0.00650 0.01020 -0.00160 5 TRP A O 67 C CB . TRP A 5 ? 0.04890 0.03570 0.05510 0.01200 0.00760 -0.00750 5 TRP A CB 68 C CG . TRP A 5 ? 0.05550 0.04000 0.05850 0.00480 -0.00190 -0.00350 5 TRP A CG 69 C CD1 . TRP A 5 ? 0.07140 0.08220 0.06390 0.01180 -0.00620 0.01320 5 TRP A CD1 70 C CD2 . TRP A 5 ? 0.06830 0.06490 0.05920 0.00830 -0.00670 -0.00290 5 TRP A CD2 71 N NE1 . TRP A 5 ? 0.08560 0.08350 0.05750 -0.01240 -0.00240 0.00220 5 TRP A NE1 72 C CE2 . TRP A 5 ? 0.08090 0.08640 0.05890 -0.00050 -0.00220 0.00520 5 TRP A CE2 73 C CE3 . TRP A 5 ? 0.09140 0.05660 0.06170 0.02250 -0.00600 0.02290 5 TRP A CE3 74 C CZ2 . TRP A 5 ? 0.09460 0.07600 0.06130 0.01240 -0.00380 0.01760 5 TRP A CZ2 75 C CZ3 . TRP A 5 ? 0.10850 0.11580 0.06700 0.03220 -0.00350 0.01930 5 TRP A CZ3 76 C CH2 . TRP A 5 ? 0.10880 0.10880 0.06350 0.03240 0.00080 0.03320 5 TRP A CH2 87 N N . LEU A 6 ? 0.05290 0.02091 0.05489 0.01199 0.00261 -0.00969 6 LEU A N 88 C CA . LEU A 6 ? 0.06650 0.04050 0.07240 0.01940 0.00600 0.00500 6 LEU A CA 89 C C . LEU A 6 ? 0.07390 0.06321 0.07720 0.03957 0.00330 0.01109 6 LEU A C 90 O O . LEU A 6 ? 0.08930 0.11900 0.08300 0.05820 0.00800 0.02240 6 LEU A O 91 C CB . LEU A 6 ? 0.06670 0.02440 0.08610 0.00290 0.00390 -0.00160 6 LEU A CB 92 C CG . LEU A 6 ? 0.04960 0.04010 0.09290 -0.00080 -0.01140 0.00700 6 LEU A CG 93 C CD1 . LEU A 6 ? 0.04560 0.06800 0.09880 0.00120 -0.01870 0.01560 6 LEU A CD1 94 C CD2 . LEU A 6 ? 0.04790 0.06390 0.09700 -0.01090 -0.00720 -0.00260 6 LEU A CD2 95 O OXT . LEU A 6 ? 0.07579 0.04741 0.08560 0.03388 0.00130 -0.00390 6 LEU A OXT # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PCA A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 LEU 6 6 6 LEU LEU A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email perczel.andras@ttk.elte.hu _pdbx_contact_author.name_first Andras _pdbx_contact_author.name_last Perczel _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1252-6416 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 101 2 HOH HOH A . B 2 HOH 2 102 1 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 1040 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 102 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-08-02 2 'Structure model' 1 1 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrysalisPro ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrysalisPro ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Fragon ? ? ? . 4 # _pdbx_entry_details.entry_id 8ANK _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Hungarian National Research, Development and Innovation Office' Hungary 2018-1.2.1-NKP-2018-00005 1 'European Regional Development Fund' 'European Union' 'VEKOP-2.3.2-16-2017-00014, VEKOP-2.3.3-15-2017-00018' 2 'Hungarian National Research, Development and Innovation Office' Hungary 'Thematic Excellence Program Synth+' 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'ECD measurements confirmed amyloid formation' # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 #