data_9DNA # _entry.id 9DNA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DNA pdb_00009dna 10.2210/pdb9dna/pdb RCSB ADH008 ? ? WWPDB D_1000180034 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1988-01-16 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9DNA _pdbx_database_status.recvd_initial_deposition_date 1987-07-10 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Heinemann, U.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure analysis of an A-DNA fragment at 1.8 A resolution: d(GCCCGGGC).' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 15 _citation.page_first 9531 _citation.page_last 9550 _citation.year 1987 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 3684603 _citation.pdbx_database_id_DOI 10.1093/nar/15.22.9531 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Heinemann, U.' 1 ? primary 'Lauble, H.' 2 ? primary 'Frank, R.' 3 ? primary 'Blocker, H.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*CP*CP*CP*GP*GP*GP*C)-3') ; 2428.593 1 ? ? ? ? 2 water nat water 18.015 34 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DC)(DC)(DG)(DG)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCCCGGGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DC n 1 5 DG n 1 6 DG n 1 7 DG n 1 8 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DC 8 8 8 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 9 9 HOH HOH A . B 2 HOH 2 10 10 HOH HOH A . B 2 HOH 3 11 11 HOH HOH A . B 2 HOH 4 12 12 HOH HOH A . B 2 HOH 5 13 13 HOH HOH A . B 2 HOH 6 14 14 HOH HOH A . B 2 HOH 7 15 15 HOH HOH A . B 2 HOH 8 16 16 HOH HOH A . B 2 HOH 9 17 17 HOH HOH A . B 2 HOH 10 18 18 HOH HOH A . B 2 HOH 11 19 19 HOH HOH A . B 2 HOH 12 20 20 HOH HOH A . B 2 HOH 13 21 21 HOH HOH A . B 2 HOH 14 22 22 HOH HOH A . B 2 HOH 15 23 23 HOH HOH A . B 2 HOH 16 24 24 HOH HOH A . B 2 HOH 17 25 25 HOH HOH A . B 2 HOH 18 26 26 HOH HOH A . B 2 HOH 19 27 27 HOH HOH A . B 2 HOH 20 28 28 HOH HOH A . B 2 HOH 21 29 29 HOH HOH A . B 2 HOH 22 30 30 HOH HOH A . B 2 HOH 23 31 31 HOH HOH A . B 2 HOH 24 32 32 HOH HOH A . B 2 HOH 25 33 33 HOH HOH A . B 2 HOH 26 34 34 HOH HOH A . B 2 HOH 27 35 35 HOH HOH A . B 2 HOH 28 36 36 HOH HOH A . B 2 HOH 29 37 37 HOH HOH A . B 2 HOH 30 38 38 HOH HOH A . B 2 HOH 31 39 39 HOH HOH A . B 2 HOH 32 40 40 HOH HOH A . B 2 HOH 33 41 41 HOH HOH A . B 2 HOH 34 42 42 HOH HOH A . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 9DNA _cell.length_a 43.250 _cell.length_b 43.250 _cell.length_c 24.610 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9DNA _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 9DNA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_percent_sol 48.09 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICRODIALYSIS _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details 'ROOM TEMPERATURE' _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details MICRODIALYSIS _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'MPD OR ISOPROPANOL' ? ? ? 1 3 1 BIS-TRIS-PROPANE_HCL ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 1 MGCL2 ? ? ? 1 6 2 WATER ? ? ? 1 7 2 'MPD OR ISOPROPANOL' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details 'ROOM TEMPERATURE' _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type STOE _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 9DNA _reflns.observed_criterion_sigma_I 1.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 1.800 _reflns.number_obs 1553 _reflns.number_all 2599 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 9DNA _refine.ls_number_reflns_obs 1359 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.000 _refine.ls_d_res_high 1.800 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1710000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 161 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 195 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 6.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? n_angle_d 0.033 ? ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 9DNA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 9DNA _struct.title 'CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 9DNA _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 9DNA _struct_ref.pdbx_db_accession 9DNA _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9DNA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9DNA _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 24.6100000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 2 A DG 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 2 A DG 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 2 A DG 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 3 A DG 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 3 A DG 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 3 A DG 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 4 A DG 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 4 A DG 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 4 A DG 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 4 N3 ? ? A DG 5 A DC 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 4 O2 ? ? A DG 5 A DC 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 4 N4 ? ? A DG 5 A DC 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 6 A DC 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 6 A DC 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 6 A DC 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 7 A DC 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 7 A DC 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 7 A DC 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 4 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP1 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 4 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.606 _pdbx_validate_rmsd_bond.bond_target_value 1.485 _pdbx_validate_rmsd_bond.bond_deviation 0.121 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.017 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C6 A DG 1 ? ? N1 A DG 1 ? ? C2 A DG 1 ? ? 119.57 125.10 -5.53 0.60 N 2 1 N1 A DG 1 ? ? C2 A DG 1 ? ? N3 A DG 1 ? ? 128.12 123.90 4.22 0.60 N 3 1 C5 A DG 1 ? ? C6 A DG 1 ? ? N1 A DG 1 ? ? 116.29 111.50 4.79 0.50 N 4 1 N1 A DG 1 ? ? C6 A DG 1 ? ? O6 A DG 1 ? ? 116.11 119.90 -3.79 0.60 N 5 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.15 108.30 3.85 0.30 N 6 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.43 108.30 2.13 0.30 N 7 1 "C3'" A DC 3 ? ? "O3'" A DC 3 ? ? P A DC 4 ? ? 128.19 119.70 8.49 1.20 Y 8 1 OP1 A DC 4 ? ? P A DC 4 ? ? OP2 A DC 4 ? ? 106.99 119.60 -12.61 1.50 N 9 1 "O5'" A DC 4 ? ? P A DC 4 ? ? OP2 A DC 4 ? ? 127.27 110.70 16.57 1.20 N 10 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.14 108.30 3.84 0.30 N 11 1 N3 A DC 4 ? ? C4 A DC 4 ? ? C5 A DC 4 ? ? 118.99 121.90 -2.91 0.40 N 12 1 P A DG 5 ? ? "O5'" A DG 5 ? ? "C5'" A DG 5 ? ? 131.08 120.90 10.18 1.60 N 13 1 C6 A DG 5 ? ? N1 A DG 5 ? ? C2 A DG 5 ? ? 120.60 125.10 -4.50 0.60 N 14 1 C5 A DG 5 ? ? C6 A DG 5 ? ? N1 A DG 5 ? ? 116.90 111.50 5.40 0.50 N 15 1 "C3'" A DG 5 ? ? "O3'" A DG 5 ? ? P A DG 6 ? ? 131.74 119.70 12.04 1.20 Y 16 1 "O5'" A DG 6 ? ? P A DG 6 ? ? OP2 A DG 6 ? ? 123.81 110.70 13.11 1.20 N 17 1 "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 103.64 109.40 -5.76 0.80 N 18 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.70 108.30 3.40 0.30 N 19 1 "O5'" A DG 7 ? ? P A DG 7 ? ? OP2 A DG 7 ? ? 99.59 105.70 -6.11 0.90 N 20 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? "C2'" A DG 7 ? ? 111.39 106.80 4.59 0.50 N 21 1 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DC 8 ? ? 134.62 119.70 14.92 1.20 Y 22 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 101.04 104.50 -3.46 0.40 N 23 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 113.95 108.30 5.65 0.30 N 24 1 C5 A DC 8 ? ? C6 A DC 8 ? ? N1 A DC 8 ? ? 124.07 121.00 3.07 0.50 N 25 1 N1 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 124.17 118.90 5.27 0.60 N 26 1 N3 A DC 8 ? ? C2 A DC 8 ? ? O2 A DC 8 ? ? 116.67 121.90 -5.23 0.70 N 27 1 C5 A DC 8 ? ? C4 A DC 8 ? ? N4 A DC 8 ? ? 124.78 120.20 4.58 0.70 N # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # _pdbx_entry_details.entry_id 9DNA _pdbx_entry_details.compound_details ;THE DEOXYRIBOSE PORTION OF RESIDUE C A 8 ADOPTS A SUGAR PUCKER IN THE C3(PRIME) -EXO DOMAIN. THIS IS UNUSUAL FOR THE A-DNA CONFORMATION. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 HOH O O N N 72 HOH H1 H N N 73 HOH H2 H N N 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 # _ndb_struct_conf_na.entry_id 9DNA _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 8 7_556 -0.229 -0.082 0.043 -0.758 -8.838 -1.948 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1 1 A DC 2 1_555 A DG 7 7_556 0.203 -0.148 -0.235 9.201 -11.056 -1.029 2 A_DC2:DG7_A A 2 ? A 7 ? 19 1 1 A DC 3 1_555 A DG 6 7_556 0.020 -0.113 0.063 4.683 -6.626 -1.200 3 A_DC3:DG6_A A 3 ? A 6 ? 19 1 1 A DC 4 1_555 A DG 5 7_556 0.105 -0.067 0.387 -5.606 -2.634 -1.873 4 A_DC4:DG5_A A 4 ? A 5 ? 19 1 1 A DG 5 1_555 A DC 4 7_556 -0.105 -0.067 0.387 5.606 -2.634 -1.873 5 A_DG5:DC4_A A 5 ? A 4 ? 19 1 1 A DG 6 1_555 A DC 3 7_556 -0.020 -0.113 0.063 -4.683 -6.626 -1.200 6 A_DG6:DC3_A A 6 ? A 3 ? 19 1 1 A DG 7 1_555 A DC 2 7_556 -0.203 -0.148 -0.235 -9.201 -11.056 -1.029 7 A_DG7:DC2_A A 7 ? A 2 ? 19 1 1 A DC 8 1_555 A DG 1 7_556 0.229 -0.082 0.043 0.758 -8.838 -1.948 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 8 7_556 A DC 2 1_555 A DG 7 7_556 0.286 -1.207 3.150 -0.809 6.392 32.358 -3.135 -0.631 2.858 11.330 1.433 32.976 1 AA_DG1DC2:DG7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ? 1 A DC 2 1_555 A DG 7 7_556 A DC 3 1_555 A DG 6 7_556 -0.079 -1.716 3.409 -1.639 9.447 32.234 -4.472 -0.124 2.809 16.564 2.874 33.593 2 AA_DC2DC3:DG6DG7_AA A 2 ? A 7 ? A 3 ? A 6 ? 1 A DC 3 1_555 A DG 6 7_556 A DC 4 1_555 A DG 5 7_556 0.009 -1.835 3.492 -1.025 2.631 34.392 -3.520 -0.182 3.345 4.441 1.730 34.504 3 AA_DC3DC4:DG5DG6_AA A 3 ? A 6 ? A 4 ? A 5 ? 1 A DC 4 1_555 A DG 5 7_556 A DG 5 1_555 A DC 4 7_556 0.000 -2.375 3.083 0.000 -1.674 21.487 -5.700 0.000 3.257 -4.480 0.000 21.552 4 AA_DC4DG5:DC4DG5_AA A 4 ? A 5 ? A 5 ? A 4 ? 1 A DG 5 1_555 A DC 4 7_556 A DG 6 1_555 A DC 3 7_556 -0.009 -1.835 3.492 1.025 2.631 34.392 -3.520 0.182 3.345 4.441 -1.730 34.504 5 AA_DG5DG6:DC3DC4_AA A 5 ? A 4 ? A 6 ? A 3 ? 1 A DG 6 1_555 A DC 3 7_556 A DG 7 1_555 A DC 2 7_556 0.079 -1.716 3.409 1.639 9.447 32.234 -4.472 0.124 2.809 16.564 -2.874 33.593 6 AA_DG6DG7:DC2DC3_AA A 6 ? A 3 ? A 7 ? A 2 ? 1 A DG 7 1_555 A DC 2 7_556 A DC 8 1_555 A DG 1 7_556 -0.286 -1.207 3.150 0.809 6.392 32.358 -3.135 0.631 2.858 11.329 -1.433 32.976 7 AA_DG7DC8:DG1DC2_AA A 7 ? A 2 ? A 8 ? A 1 ? # _atom_sites.entry_id 9DNA _atom_sites.fract_transf_matrix[1][1] 0.023121 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023121 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040634 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text ;THE DEOXYRIBOSE PORTION OF RESIDUE C A 8 ADOPTS A SUGAR PUCKER IN THE C3(PRIME) -EXO DOMAIN. THIS IS UNUSUAL FOR THE A-DNA CONFORMATION. ; # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 35.815 45.746 7.218 1.00 23.61 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 35.906 47.181 7.388 1.00 22.84 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 34.643 47.649 8.077 1.00 23.51 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 33.506 47.545 7.243 1.00 24.68 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 34.267 46.814 9.298 1.00 24.80 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 35.089 47.212 10.388 1.00 25.05 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 32.766 47.069 9.438 1.00 23.47 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 32.351 47.099 7.974 1.00 23.14 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 31.936 45.793 7.469 1.00 21.22 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 32.641 44.885 6.746 1.00 21.60 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 31.970 43.808 6.411 1.00 22.39 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 30.695 44.037 6.970 1.00 22.80 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 29.501 43.259 6.977 1.00 22.77 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 29.323 42.134 6.470 1.00 23.33 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 28.424 43.808 7.617 1.00 22.07 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 28.545 45.023 8.210 1.00 22.58 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 27.438 45.451 8.850 1.00 23.76 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 29.613 45.815 8.249 1.00 22.08 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 30.669 45.252 7.619 1.00 22.58 ? 1 DG A C4 1 ATOM 20 P P . DC A 1 2 ? 35.309 46.286 11.717 1.00 28.71 ? 2 DC A P 1 ATOM 21 O OP1 . DC A 1 2 ? 36.213 47.108 12.492 1.00 25.98 ? 2 DC A OP1 1 ATOM 22 O OP2 . DC A 1 2 ? 35.789 44.945 11.170 1.00 26.94 ? 2 DC A OP2 1 ATOM 23 O "O5'" . DC A 1 2 ? 33.891 45.919 12.381 1.00 27.60 ? 2 DC A "O5'" 1 ATOM 24 C "C5'" . DC A 1 2 ? 33.264 46.861 13.297 1.00 28.39 ? 2 DC A "C5'" 1 ATOM 25 C "C4'" . DC A 1 2 ? 31.828 46.463 13.390 1.00 27.97 ? 2 DC A "C4'" 1 ATOM 26 O "O4'" . DC A 1 2 ? 31.252 46.191 12.128 1.00 28.75 ? 2 DC A "O4'" 1 ATOM 27 C "C3'" . DC A 1 2 ? 31.676 45.127 14.129 1.00 29.88 ? 2 DC A "C3'" 1 ATOM 28 O "O3'" . DC A 1 2 ? 31.957 45.313 15.514 1.00 30.50 ? 2 DC A "O3'" 1 ATOM 29 C "C2'" . DC A 1 2 ? 30.249 44.746 13.710 1.00 27.70 ? 2 DC A "C2'" 1 ATOM 30 C "C1'" . DC A 1 2 ? 30.232 45.170 12.239 1.00 26.51 ? 2 DC A "C1'" 1 ATOM 31 N N1 . DC A 1 2 ? 30.474 44.041 11.323 1.00 25.05 ? 2 DC A N1 1 ATOM 32 C C2 . DC A 1 2 ? 29.427 43.185 11.028 1.00 24.00 ? 2 DC A C2 1 ATOM 33 O O2 . DC A 1 2 ? 28.294 43.362 11.508 1.00 24.89 ? 2 DC A O2 1 ATOM 34 N N3 . DC A 1 2 ? 29.657 42.130 10.181 1.00 22.60 ? 2 DC A N3 1 ATOM 35 C C4 . DC A 1 2 ? 30.859 41.927 9.615 1.00 22.86 ? 2 DC A C4 1 ATOM 36 N N4 . DC A 1 2 ? 31.101 40.884 8.820 1.00 23.37 ? 2 DC A N4 1 ATOM 37 C C5 . DC A 1 2 ? 31.944 42.792 9.920 1.00 24.45 ? 2 DC A C5 1 ATOM 38 C C6 . DC A 1 2 ? 31.707 43.808 10.779 1.00 24.78 ? 2 DC A C6 1 ATOM 39 P P . DC A 1 3 ? 32.355 44.054 16.422 1.00 33.48 ? 3 DC A P 1 ATOM 40 O OP1 . DC A 1 3 ? 32.450 44.669 17.815 1.00 31.89 ? 3 DC A OP1 1 ATOM 41 O OP2 . DC A 1 3 ? 33.540 43.419 15.849 1.00 33.91 ? 3 DC A OP2 1 ATOM 42 O "O5'" . DC A 1 3 ? 31.153 42.969 16.526 1.00 30.68 ? 3 DC A "O5'" 1 ATOM 43 C "C5'" . DC A 1 3 ? 29.946 43.535 17.126 1.00 30.58 ? 3 DC A "C5'" 1 ATOM 44 C "C4'" . DC A 1 3 ? 28.874 42.476 17.038 1.00 28.71 ? 3 DC A "C4'" 1 ATOM 45 O "O4'" . DC A 1 3 ? 28.433 42.389 15.699 1.00 29.09 ? 3 DC A "O4'" 1 ATOM 46 C "C3'" . DC A 1 3 ? 29.328 41.066 17.365 1.00 28.08 ? 3 DC A "C3'" 1 ATOM 47 O "O3'" . DC A 1 3 ? 29.401 40.798 18.755 1.00 29.23 ? 3 DC A "O3'" 1 ATOM 48 C "C2'" . DC A 1 3 ? 28.216 40.248 16.720 1.00 27.95 ? 3 DC A "C2'" 1 ATOM 49 C "C1'" . DC A 1 3 ? 28.078 41.010 15.426 1.00 27.10 ? 3 DC A "C1'" 1 ATOM 50 N N1 . DC A 1 3 ? 28.969 40.443 14.394 1.00 25.94 ? 3 DC A N1 1 ATOM 51 C C2 . DC A 1 3 ? 28.489 39.332 13.723 1.00 24.40 ? 3 DC A C2 1 ATOM 52 O O2 . DC A 1 3 ? 27.395 38.877 14.023 1.00 23.94 ? 3 DC A O2 1 ATOM 53 N N3 . DC A 1 3 ? 29.272 38.839 12.706 1.00 24.64 ? 3 DC A N3 1 ATOM 54 C C4 . DC A 1 3 ? 30.474 39.383 12.384 1.00 23.44 ? 3 DC A C4 1 ATOM 55 N N4 . DC A 1 3 ? 31.166 38.851 11.375 1.00 22.95 ? 3 DC A N4 1 ATOM 56 C C5 . DC A 1 3 ? 30.954 40.504 13.095 1.00 24.42 ? 3 DC A C5 1 ATOM 57 C C6 . DC A 1 3 ? 30.167 40.997 14.057 1.00 24.66 ? 3 DC A C6 1 ATOM 58 P P . DC A 1 4 ? 29.579 39.409 19.469 1.00 28.89 ? 4 DC A P 1 ATOM 59 O OP1 . DC A 1 4 ? 28.995 39.578 20.955 1.00 30.24 ? 4 DC A OP1 1 ATOM 60 O OP2 . DC A 1 4 ? 31.015 39.396 19.580 1.00 28.36 ? 4 DC A OP2 1 ATOM 61 O "O5'" . DC A 1 4 ? 28.670 38.281 18.918 1.00 25.23 ? 4 DC A "O5'" 1 ATOM 62 C "C5'" . DC A 1 4 ? 27.299 38.017 19.247 1.00 23.82 ? 4 DC A "C5'" 1 ATOM 63 C "C4'" . DC A 1 4 ? 26.966 36.702 18.539 1.00 23.70 ? 4 DC A "C4'" 1 ATOM 64 O "O4'" . DC A 1 4 ? 27.027 36.788 17.126 1.00 23.25 ? 4 DC A "O4'" 1 ATOM 65 C "C3'" . DC A 1 4 ? 27.940 35.590 18.888 1.00 23.78 ? 4 DC A "C3'" 1 ATOM 66 O "O3'" . DC A 1 4 ? 27.637 34.968 20.143 1.00 24.81 ? 4 DC A "O3'" 1 ATOM 67 C "C2'" . DC A 1 4 ? 27.779 34.674 17.690 1.00 23.81 ? 4 DC A "C2'" 1 ATOM 68 C "C1'" . DC A 1 4 ? 27.472 35.582 16.521 1.00 21.95 ? 4 DC A "C1'" 1 ATOM 69 N N1 . DC A 1 4 ? 28.701 35.776 15.736 1.00 21.32 ? 4 DC A N1 1 ATOM 70 C C2 . DC A 1 4 ? 29.008 34.821 14.778 1.00 21.20 ? 4 DC A C2 1 ATOM 71 O O2 . DC A 1 4 ? 28.273 33.847 14.591 1.00 21.34 ? 4 DC A O2 1 ATOM 72 N N3 . DC A 1 4 ? 30.150 34.955 14.028 1.00 20.93 ? 4 DC A N3 1 ATOM 73 C C4 . DC A 1 4 ? 30.971 36.014 14.198 1.00 20.98 ? 4 DC A C4 1 ATOM 74 N N4 . DC A 1 4 ? 32.091 36.101 13.459 1.00 19.72 ? 4 DC A N4 1 ATOM 75 C C5 . DC A 1 4 ? 30.643 36.996 15.192 1.00 22.18 ? 4 DC A C5 1 ATOM 76 C C6 . DC A 1 4 ? 29.514 36.862 15.915 1.00 20.83 ? 4 DC A C6 1 ATOM 77 P P . DG A 1 5 ? 28.571 33.821 20.680 1.00 28.62 ? 5 DG A P 1 ATOM 78 O OP1 . DG A 1 5 ? 27.961 33.406 22.036 1.00 29.94 ? 5 DG A OP1 1 ATOM 79 O OP2 . DG A 1 5 ? 29.998 34.167 20.756 1.00 28.24 ? 5 DG A OP2 1 ATOM 80 O "O5'" . DG A 1 5 ? 28.350 32.541 19.708 1.00 27.70 ? 5 DG A "O5'" 1 ATOM 81 C "C5'" . DG A 1 5 ? 28.796 31.188 19.821 1.00 25.03 ? 5 DG A "C5'" 1 ATOM 82 C "C4'" . DG A 1 5 ? 28.670 30.491 18.492 1.00 22.48 ? 5 DG A "C4'" 1 ATOM 83 O "O4'" . DG A 1 5 ? 28.757 31.365 17.385 1.00 21.34 ? 5 DG A "O4'" 1 ATOM 84 C "C3'" . DG A 1 5 ? 29.825 29.522 18.236 1.00 22.28 ? 5 DG A "C3'" 1 ATOM 85 O "O3'" . DG A 1 5 ? 29.747 28.450 19.129 1.00 23.81 ? 5 DG A "O3'" 1 ATOM 86 C "C2'" . DG A 1 5 ? 29.600 29.246 16.732 1.00 20.79 ? 5 DG A "C2'" 1 ATOM 87 C "C1'" . DG A 1 5 ? 29.358 30.656 16.267 1.00 18.73 ? 5 DG A "C1'" 1 ATOM 88 N N9 . DG A 1 5 ? 30.599 31.352 15.864 1.00 17.73 ? 5 DG A N9 1 ATOM 89 C C8 . DG A 1 5 ? 31.214 32.438 16.380 1.00 15.47 ? 5 DG A C8 1 ATOM 90 N N7 . DG A 1 5 ? 32.277 32.796 15.728 1.00 17.16 ? 5 DG A N7 1 ATOM 91 C C5 . DG A 1 5 ? 32.407 31.836 14.724 1.00 17.33 ? 5 DG A C5 1 ATOM 92 C C6 . DG A 1 5 ? 33.354 31.637 13.683 1.00 17.61 ? 5 DG A C6 1 ATOM 93 O O6 . DG A 1 5 ? 34.349 32.329 13.486 1.00 17.45 ? 5 DG A O6 1 ATOM 94 N N1 . DG A 1 5 ? 33.142 30.565 12.844 1.00 17.85 ? 5 DG A N1 1 ATOM 95 C C2 . DG A 1 5 ? 32.074 29.752 13.021 1.00 18.08 ? 5 DG A C2 1 ATOM 96 N N2 . DG A 1 5 ? 31.910 28.722 12.165 1.00 17.78 ? 5 DG A N2 1 ATOM 97 N N3 . DG A 1 5 ? 31.136 29.886 13.974 1.00 18.90 ? 5 DG A N3 1 ATOM 98 C C4 . DG A 1 5 ? 31.374 30.950 14.788 1.00 18.15 ? 5 DG A C4 1 ATOM 99 P P . DG A 1 6 ? 30.876 27.446 19.708 1.00 22.52 ? 6 DG A P 1 ATOM 100 O OP1 . DG A 1 6 ? 30.076 26.521 20.655 1.00 25.69 ? 6 DG A OP1 1 ATOM 101 O OP2 . DG A 1 6 ? 31.884 28.229 20.279 1.00 22.65 ? 6 DG A OP2 1 ATOM 102 O "O5'" . DG A 1 6 ? 31.036 26.668 18.357 1.00 22.49 ? 6 DG A "O5'" 1 ATOM 103 C "C5'" . DG A 1 6 ? 30.154 25.639 17.820 1.00 22.69 ? 6 DG A "C5'" 1 ATOM 104 C "C4'" . DG A 1 6 ? 30.833 25.223 16.533 1.00 21.81 ? 6 DG A "C4'" 1 ATOM 105 O "O4'" . DG A 1 6 ? 30.958 26.352 15.694 1.00 21.45 ? 6 DG A "O4'" 1 ATOM 106 C "C3'" . DG A 1 6 ? 32.264 24.730 16.673 1.00 23.06 ? 6 DG A "C3'" 1 ATOM 107 O "O3'" . DG A 1 6 ? 32.360 23.372 17.111 1.00 25.33 ? 6 DG A "O3'" 1 ATOM 108 C "C2'" . DG A 1 6 ? 32.801 24.912 15.256 1.00 21.81 ? 6 DG A "C2'" 1 ATOM 109 C "C1'" . DG A 1 6 ? 32.139 26.222 14.882 1.00 20.29 ? 6 DG A "C1'" 1 ATOM 110 N N9 . DG A 1 6 ? 33.086 27.299 15.133 1.00 19.62 ? 6 DG A N9 1 ATOM 111 C C8 . DG A 1 6 ? 32.982 28.324 16.036 1.00 19.02 ? 6 DG A C8 1 ATOM 112 N N7 . DG A 1 6 ? 33.977 29.159 15.989 1.00 18.95 ? 6 DG A N7 1 ATOM 113 C C5 . DG A 1 6 ? 34.790 28.670 14.953 1.00 18.27 ? 6 DG A C5 1 ATOM 114 C C6 . DG A 1 6 ? 36.019 29.125 14.431 1.00 18.25 ? 6 DG A C6 1 ATOM 115 O O6 . DG A 1 6 ? 36.680 30.089 14.805 1.00 18.81 ? 6 DG A O6 1 ATOM 116 N N1 . DG A 1 6 ? 36.460 28.424 13.341 1.00 20.05 ? 6 DG A N1 1 ATOM 117 C C2 . DG A 1 6 ? 35.820 27.312 12.859 1.00 18.22 ? 6 DG A C2 1 ATOM 118 N N2 . DG A 1 6 ? 36.408 26.664 11.850 1.00 18.41 ? 6 DG A N2 1 ATOM 119 N N3 . DG A 1 6 ? 34.712 26.811 13.380 1.00 18.42 ? 6 DG A N3 1 ATOM 120 C C4 . DG A 1 6 ? 34.254 27.529 14.426 1.00 18.78 ? 6 DG A C4 1 ATOM 121 P P . DG A 1 7 ? 33.623 22.910 18.024 1.00 27.67 ? 7 DG A P 1 ATOM 122 O OP1 . DG A 1 7 ? 33.129 21.590 18.485 1.00 26.59 ? 7 DG A OP1 1 ATOM 123 O OP2 . DG A 1 7 ? 34.124 24.038 18.935 1.00 24.47 ? 7 DG A OP2 1 ATOM 124 O "O5'" . DG A 1 7 ? 34.864 22.840 16.971 1.00 25.04 ? 7 DG A "O5'" 1 ATOM 125 C "C5'" . DG A 1 7 ? 34.717 21.750 16.028 1.00 24.78 ? 7 DG A "C5'" 1 ATOM 126 C "C4'" . DG A 1 7 ? 35.854 21.932 15.039 1.00 23.58 ? 7 DG A "C4'" 1 ATOM 127 O "O4'" . DG A 1 7 ? 35.729 23.230 14.468 1.00 21.93 ? 7 DG A "O4'" 1 ATOM 128 C "C3'" . DG A 1 7 ? 37.273 21.854 15.595 1.00 22.44 ? 7 DG A "C3'" 1 ATOM 129 O "O3'" . DG A 1 7 ? 37.736 20.548 15.824 1.00 24.59 ? 7 DG A "O3'" 1 ATOM 130 C "C2'" . DG A 1 7 ? 38.060 22.542 14.466 1.00 20.85 ? 7 DG A "C2'" 1 ATOM 131 C "C1'" . DG A 1 7 ? 37.091 23.627 14.151 1.00 20.70 ? 7 DG A "C1'" 1 ATOM 132 N N9 . DG A 1 7 ? 37.312 24.847 14.951 1.00 19.76 ? 7 DG A N9 1 ATOM 133 C C8 . DG A 1 7 ? 36.546 25.422 15.933 1.00 19.97 ? 7 DG A C8 1 ATOM 134 N N7 . DG A 1 7 ? 37.026 26.564 16.380 1.00 19.01 ? 7 DG A N7 1 ATOM 135 C C5 . DG A 1 7 ? 38.185 26.733 15.618 1.00 20.03 ? 7 DG A C5 1 ATOM 136 C C6 . DG A 1 7 ? 39.154 27.775 15.556 1.00 20.17 ? 7 DG A C6 1 ATOM 137 O O6 . DG A 1 7 ? 39.185 28.805 16.275 1.00 20.62 ? 7 DG A O6 1 ATOM 138 N N1 . DG A 1 7 ? 40.132 27.546 14.626 1.00 19.91 ? 7 DG A N1 1 ATOM 139 C C2 . DG A 1 7 ? 40.201 26.460 13.838 1.00 19.32 ? 7 DG A C2 1 ATOM 140 N N2 . DG A 1 7 ? 41.243 26.352 13.009 1.00 20.56 ? 7 DG A N2 1 ATOM 141 N N3 . DG A 1 7 ? 39.323 25.461 13.826 1.00 19.06 ? 7 DG A N3 1 ATOM 142 C C4 . DG A 1 7 ? 38.354 25.686 14.724 1.00 19.41 ? 7 DG A C4 1 ATOM 143 P P . DC A 1 8 ? 38.886 19.930 16.666 1.00 25.47 ? 8 DC A P 1 ATOM 144 O OP1 . DC A 1 8 ? 38.674 18.468 16.513 1.00 28.92 ? 8 DC A OP1 1 ATOM 145 O OP2 . DC A 1 8 ? 38.566 20.518 17.958 1.00 28.02 ? 8 DC A OP2 1 ATOM 146 O "O5'" . DC A 1 8 ? 40.283 20.319 16.124 1.00 28.93 ? 8 DC A "O5'" 1 ATOM 147 C "C5'" . DC A 1 8 ? 40.465 20.111 14.697 1.00 28.73 ? 8 DC A "C5'" 1 ATOM 148 C "C4'" . DC A 1 8 ? 41.715 20.799 14.193 1.00 29.15 ? 8 DC A "C4'" 1 ATOM 149 O "O4'" . DC A 1 8 ? 41.749 22.192 14.328 1.00 28.16 ? 8 DC A "O4'" 1 ATOM 150 C "C3'" . DC A 1 8 ? 43.016 20.401 14.914 1.00 30.23 ? 8 DC A "C3'" 1 ATOM 151 O "O3'" . DC A 1 8 ? 44.016 20.453 13.880 1.00 32.32 ? 8 DC A "O3'" 1 ATOM 152 C "C2'" . DC A 1 8 ? 43.073 21.387 16.078 1.00 29.11 ? 8 DC A "C2'" 1 ATOM 153 C "C1'" . DC A 1 8 ? 42.640 22.667 15.344 1.00 27.13 ? 8 DC A "C1'" 1 ATOM 154 N N1 . DC A 1 8 ? 42.039 23.697 16.245 1.00 25.67 ? 8 DC A N1 1 ATOM 155 C C2 . DC A 1 8 ? 42.705 24.921 16.233 1.00 24.73 ? 8 DC A C2 1 ATOM 156 O O2 . DC A 1 8 ? 43.726 25.150 15.573 1.00 25.13 ? 8 DC A O2 1 ATOM 157 N N3 . DC A 1 8 ? 42.229 25.946 17.003 1.00 23.52 ? 8 DC A N3 1 ATOM 158 C C4 . DC A 1 8 ? 41.148 25.786 17.776 1.00 22.69 ? 8 DC A C4 1 ATOM 159 N N4 . DC A 1 8 ? 40.798 26.867 18.472 1.00 23.25 ? 8 DC A N4 1 ATOM 160 C C5 . DC A 1 8 ? 40.434 24.566 17.768 1.00 23.03 ? 8 DC A C5 1 ATOM 161 C C6 . DC A 1 8 ? 40.914 23.589 17.003 1.00 23.59 ? 8 DC A C6 1 HETATM 162 O O . HOH B 2 . ? 38.315 48.509 10.991 1.00 42.42 ? 9 HOH A O 1 HETATM 163 O O . HOH B 2 . ? 24.774 45.957 11.611 1.00 41.60 ? 10 HOH A O 1 HETATM 164 O O . HOH B 2 . ? 32.554 37.091 18.736 1.00 39.67 ? 11 HOH A O 1 HETATM 165 O O . HOH B 2 . ? 31.620 39.928 22.316 1.00 48.33 ? 12 HOH A O 1 HETATM 166 O O . HOH B 2 . ? 29.103 40.936 23.436 1.00 33.93 ? 13 HOH A O 1 HETATM 167 O O . HOH B 2 . ? 27.010 31.408 23.096 1.00 39.57 ? 14 HOH A O 1 HETATM 168 O O . HOH B 2 . ? 32.987 30.119 21.408 1.00 37.17 ? 15 HOH A O 1 HETATM 169 O O . HOH B 2 . ? 34.514 30.474 18.362 1.00 32.61 ? 16 HOH A O 1 HETATM 170 O O . HOH B 2 . ? 30.573 21.746 20.409 1.00 57.51 ? 17 HOH A O 1 HETATM 171 O O . HOH B 2 . ? 38.557 22.546 19.292 1.00 34.80 ? 18 HOH A O 1 HETATM 172 O O . HOH B 2 . ? 23.294 40.071 23.939 1.00 38.56 ? 19 HOH A O 1 HETATM 173 O O . HOH B 2 . ? 30.643 40.547 4.841 1.00 27.29 ? 20 HOH A O 1 HETATM 174 O O . HOH B 2 . ? 38.220 40.495 12.177 1.00 59.96 ? 21 HOH A O 1 HETATM 175 O O . HOH B 2 . ? 28.372 25.829 14.931 1.00 32.30 ? 22 HOH A O 1 HETATM 176 O O . HOH B 2 . ? 27.438 42.714 19.981 1.00 31.03 ? 23 HOH A O 1 HETATM 177 O O . HOH B 2 . ? 31.175 47.242 16.708 1.00 43.34 ? 24 HOH A O 1 HETATM 178 O O . HOH B 2 . ? 24.761 38.467 22.144 1.00 56.49 ? 25 HOH A O 1 HETATM 179 O O . HOH B 2 . ? 30.167 39.716 0.866 1.00 40.72 ? 26 HOH A O 1 HETATM 180 O O . HOH B 2 . ? 29.873 28.229 22.607 1.00 47.38 ? 27 HOH A O 1 HETATM 181 O O . HOH B 2 . ? 31.391 45.836 20.850 1.00 49.06 ? 28 HOH A O 1 HETATM 182 O O . HOH B 2 . ? 38.268 26.205 20.050 1.00 27.49 ? 29 HOH A O 1 HETATM 183 O O . HOH B 2 . ? 40.287 24.043 12.147 1.00 38.59 ? 30 HOH A O 1 HETATM 184 O O . HOH B 2 . ? 37.480 41.165 7.917 1.00 33.51 ? 31 HOH A O 1 HETATM 185 O O . HOH B 2 . ? 27.909 37.550 22.937 1.00 53.50 ? 32 HOH A O 1 HETATM 186 O O . HOH B 2 . ? 36.347 34.440 14.938 1.00 51.23 ? 33 HOH A O 1 HETATM 187 O O . HOH B 2 . ? 25.911 40.910 20.384 1.00 47.74 ? 34 HOH A O 1 HETATM 188 O O . HOH B 2 . ? 26.733 44.846 12.844 1.00 42.44 ? 35 HOH A O 1 HETATM 189 O O . HOH B 2 . ? 34.094 38.756 10.061 1.00 53.45 ? 36 HOH A O 1 HETATM 190 O O . HOH B 2 . ? 34.081 38.155 14.266 1.00 38.81 ? 37 HOH A O 1 HETATM 191 O O . HOH B 2 . ? 36.083 32.104 16.043 1.00 28.92 ? 38 HOH A O 1 HETATM 192 O O . HOH B 2 . ? 36.317 27.728 18.868 1.00 33.15 ? 39 HOH A O 1 HETATM 193 O O . HOH B 2 . ? 40.716 49.846 12.832 1.00 55.87 ? 40 HOH A O 1 HETATM 194 O O . HOH B 2 . ? 34.436 35.517 15.979 1.00 54.08 ? 41 HOH A O 1 HETATM 195 O O . HOH B 2 . ? 29.099 28.588 13.656 1.00 43.30 ? 42 HOH A O 1 #